HEADER OXYGEN BINDING/TRANSPORT PROTEIN 20-APR-16 5JGG OBSLTE 10-APR-19 5JGG 6IYH TITLE X-RAY SEQUENCE AND HIGH RESOLUTION CRYSTAL STRUCTURE OF PERSIAN TITLE 2 STURGEON METHEMOGLOBIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA CHAIN; COMPND 3 CHAIN: A; COMPND 4 OTHER_DETAILS: SEQUENCE IS DERIVED FROM STRUCTURE.; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: BETA CHAIN; COMPND 7 CHAIN: B; COMPND 8 OTHER_DETAILS: SEQUENCE IS DERIVED FROM STRUCTURE. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACIPENSER PERSICUS; SOURCE 3 ORGANISM_TAXID: 61968; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: ACIPENSER PERSICUS; SOURCE 6 ORGANISM_TAXID: 61968 KEYWDS METHEMOGLOBIN, HEME, IRON CONTAINING, OXYGEN-CARRYING, OXYGEN KEYWDS 2 TRANSPORT, OXYGEN BINDING-TRANSPORT PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.SEYEDARABI REVDAT 2 10-APR-19 5JGG 1 OBSLTE REVDAT 1 26-APR-17 5JGG 0 JRNL AUTH A.SEYEDARABI JRNL TITL X-RAY SEQUENCE AND HIGH RESOLUTION CRYSTAL STRUCTURE OF JRNL TITL 2 PERSIAN STURGEON METHEMOGLOBIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 34936 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1802 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2570 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE SET COUNT : 135 REMARK 3 BIN FREE R VALUE : 0.2760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2195 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 96 REMARK 3 SOLVENT ATOMS : 375 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.090 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.093 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.072 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.239 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2364 ; 0.023 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2218 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3244 ; 2.034 ; 1.980 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5075 ; 1.897 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 284 ; 5.831 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 91 ;38.718 ;24.066 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 352 ;12.920 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;12.759 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 374 ; 0.151 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2657 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 563 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1142 ; 1.807 ; 1.611 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1141 ; 1.806 ; 1.609 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1424 ; 2.594 ; 2.408 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1425 ; 2.594 ; 2.410 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1222 ; 3.061 ; 1.882 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1222 ; 3.050 ; 1.882 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1821 ; 4.425 ; 2.710 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3214 ; 6.645 ;15.740 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3006 ; 6.190 ;14.611 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5JGG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000219396. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BSRF REMARK 200 BEAMLINE : 1W2B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34936 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 52.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.12300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3BOM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 6.5, 12%(W/V) PEG 20000, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 20.16726 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.14500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 50.32766 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 20.16726 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.14500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 50.32766 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 53.89000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 UNK B 1 REMARK 465 UNK B 146 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 305 O HOH B 306 2.11 REMARK 500 O HOH A 347 O HOH A 406 2.16 REMARK 500 O HOH A 415 O HOH B 355 2.16 REMARK 500 OE2 GLU A 34 O HOH A 301 2.18 REMARK 500 OE1 GLU B 94 O HOH B 301 2.19 REMARK 500 OD1 ASP A 76 O HOH A 302 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER A 44 NE2 GLN B 59 1455 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 6 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG A 31 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ASP A 48 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG A 142 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 142 CA - C - O ANGL. DEV. = -16.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR B 35 75.01 -117.95 REMARK 500 ASP B 80 77.11 -154.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR A 1 LEU A 2 145.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 88 NE2 REMARK 620 2 HEM A 201 NA 89.3 REMARK 620 3 HEM A 201 NB 89.7 90.4 REMARK 620 4 HEM A 201 NC 93.0 177.7 89.5 REMARK 620 5 HEM A 201 ND 91.7 89.9 178.6 90.1 REMARK 620 6 HOH A 361 O 179.7 90.7 90.7 87.0 88.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 92 NE2 REMARK 620 2 HEM B 201 NA 91.0 REMARK 620 3 HEM B 201 NB 92.2 89.0 REMARK 620 4 HEM B 201 NC 91.7 177.3 90.9 REMARK 620 5 HEM B 201 ND 91.0 91.2 176.8 88.8 REMARK 620 6 HOH B 321 O 175.8 93.2 88.3 84.1 88.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGO B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGO B 203 REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHOR STATES THAT RESIDUES 1 AND 146 OF THE BETA CHAIN DO NOT HAVE REMARK 999 CLEAR DENSITY, THEREFORE THE SEQUENCE IS LEFT AS UNKNOWN. THE REMARK 999 SEQUENCE OF THIS PROTEIN WAS NOT AVAILABLE AT THE UNIPROT REMARK 999 KNOWLEDGEBASE DATABASE (UNIPROTKB) AT THE TIME OF DEPOSITION. DBREF 5JGG A 1 141 PDB 5JGG 5JGG 1 141 DBREF 5JGG B 1 146 PDB 5JGG 5JGG 1 146 SEQRES 1 A 142 THR LEU THR SER ALA ASP LYS SER HIS VAL LYS SER ILE SEQRES 2 A 142 TRP SER LYS ALA SER GLY LYS ALA GLU GLU LEU GLY ALA SEQRES 3 A 142 GLU ALA LEU GLY ARG MET LEU GLU VAL PHE PRO ASN THR SEQRES 4 A 142 LYS THR TYR PHE SER HIS TYR ALA ASP LEU SER VAL THR SEQRES 5 A 142 SER GLY GLN VAL HIS THR HIS GLY LYS LYS ILE LEU ASP SEQRES 6 A 142 ALA ILE THR THR ALA VAL ASN HIS ILE ASP ASP ILE THR SEQRES 7 A 142 GLY VAL LEU THR ALA LEU SER THR LEU HIS ALA LYS THR SEQRES 8 A 142 LEU ARG VAL ASP PRO ALA ASN PHE LYS ILE LEU SER HIS SEQRES 9 A 142 THR ILE LEU VAL VAL LEU ALA LEU TYR PHE PRO ALA ASP SEQRES 10 A 142 PHE THR PRO GLU VAL HIS LEU ALA CYS ASP LYS PHE LEU SEQRES 11 A 142 ALA SER VAL SER HIS THR LEU ALA THR LYS TYR ARG SEQRES 1 B 146 UNK GLU TRP THR ASP SER GLU ARG PHE ALA ILE VAL THR SEQRES 2 B 146 LEU TRP ALA LYS VAL ASN VAL GLU THR VAL GLY ALA GLN SEQRES 3 B 146 ALA LEU VAL ARG LEU LEU VAL VAL TYR PRO TRP THR GLN SEQRES 4 B 146 ARG TYR PHE GLY ALA PHE GLY ASN ILE SER ASP ALA ALA SEQRES 5 B 146 ALA ILE ALA GLY ASN ALA GLN VAL HIS ALA HIS GLY LYS SEQRES 6 B 146 THR VAL LEU ASP SER VAL GLY ASN ALA ILE ALA HIS MET SEQRES 7 B 146 ASP ASP VAL ALA ASP ALA PHE THR ALA LEU SER THR PHE SEQRES 8 B 146 HIS SER GLU THR LEU HIS VAL ASP PRO ASP ASN PHE GLN SEQRES 9 B 146 HIS PHE GLY ASP CYS LEU SER ILE VAL LEU ALA ALA THR SEQRES 10 B 146 PHE GLY THR ALA TYR THR PRO ASP VAL GLN ALA ALA TRP SEQRES 11 B 146 GLN LYS MET ILE ALA VAL ILE ILE SER ALA LEU SER LYS SEQRES 12 B 146 GLU TYR UNK HET HEM A 201 43 HET HEM B 201 43 HET PGO B 202 5 HET PGO B 203 5 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM PGO S-1,2-PROPANEDIOL HETSYN HEM HEME FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 5 PGO 2(C3 H8 O2) FORMUL 7 HOH *375(H2 O) HELIX 1 AA1 THR A 3 SER A 18 1 16 HELIX 2 AA2 LYS A 20 PHE A 36 1 17 HELIX 3 AA3 PRO A 37 SER A 44 5 8 HELIX 4 AA4 SER A 53 HIS A 73 1 21 HELIX 5 AA5 ASP A 76 THR A 91 1 16 HELIX 6 AA6 ASP A 95 ALA A 97 5 3 HELIX 7 AA7 ASN A 98 PHE A 114 1 17 HELIX 8 AA8 THR A 119 THR A 139 1 21 HELIX 9 AA9 LYS A 140 ARG A 142 5 3 HELIX 10 AB1 THR B 4 ALA B 16 1 13 HELIX 11 AB2 ASN B 19 TYR B 35 1 17 HELIX 12 AB3 PRO B 36 GLY B 46 5 11 HELIX 13 AB4 ASP B 50 ASN B 57 1 8 HELIX 14 AB5 ASN B 57 HIS B 77 1 21 HELIX 15 AB6 ASP B 80 PHE B 85 1 6 HELIX 16 AB7 PHE B 85 THR B 95 1 11 HELIX 17 AB8 PRO B 100 GLY B 119 1 20 HELIX 18 AB9 THR B 120 TYR B 122 5 3 HELIX 19 AC1 THR B 123 LYS B 143 1 21 LINK NE2 HIS A 88 FE HEM A 201 1555 1555 2.08 LINK NE2 HIS B 92 FE HEM B 201 1555 1555 2.10 LINK FE HEM A 201 O HOH A 361 1555 1555 2.04 LINK FE HEM B 201 O HOH B 321 1555 1555 2.09 SITE 1 AC1 18 TYR A 42 PHE A 43 HIS A 45 TYR A 46 SITE 2 AC1 18 HIS A 59 LYS A 62 LEU A 84 LEU A 87 SITE 3 AC1 18 HIS A 88 LEU A 92 VAL A 94 ASN A 98 SITE 4 AC1 18 LEU A 102 LEU A 137 HOH A 318 HOH A 357 SITE 5 AC1 18 HOH A 361 HOH A 403 SITE 1 AC2 14 TYR B 41 PHE B 42 HIS B 63 LEU B 88 SITE 2 AC2 14 HIS B 92 LEU B 96 ASN B 102 PHE B 103 SITE 3 AC2 14 PHE B 106 LEU B 141 HOH B 310 HOH B 321 SITE 4 AC2 14 HOH B 322 HOH B 348 SITE 1 AC3 5 PHE A 36 ILE A 101 ASP B 108 HOH B 355 SITE 2 AC3 5 HOH B 388 SITE 1 AC4 8 LYS A 11 TRP A 14 SER A 15 SER A 18 SITE 2 AC4 8 THR A 68 ASN A 72 GLU B 21 HOH B 405 CRYST1 53.890 62.290 101.564 90.00 97.67 90.00 I 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018556 0.000000 0.002498 0.00000 SCALE2 0.000000 0.016054 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009935 0.00000