HEADER DNA BINDING PROTEIN 20-APR-16 5JGH TITLE CRYSTAL STRUCTURE OF THE MITOCHONDRIAL DNA PACKAGING PROTEIN ABF2P IN TITLE 2 COMPLEX WITH DNA AT 2.6 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARS-BINDING FACTOR 2, MITOCHONDRIAL; COMPND 3 CHAIN: A, D, G, J; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'- COMPND 7 D(*TP*TP*TP*AP*TP*TP*AP*TP*TP*TP*TP*AP*TP*AP*TP*TP*AP*TP*AP*TP*AP*A)- COMPND 8 3'); COMPND 9 CHAIN: B, E, H, K; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (5'- COMPND 13 D(*TP*TP*AP*TP*AP*TP*AP*AP*TP*AP*TP*AP*AP*AP*AP*TP*AP*AP*TP*AP*AP*A)- COMPND 14 3'); COMPND 15 CHAIN: C, F, I, L; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C); SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292; SOURCE 6 GENE: ABF2, HIM1, YMR072W, YM9916.11; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_VARIANT: PLYS; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PCRI7A (PET-28A DERIVATIVE); SOURCE 12 MOL_ID: 2; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 15 ORGANISM_TAXID: 4932; SOURCE 16 OTHER_DETAILS: OLIGOS PURCHASED FROM BIOMERS; SOURCE 17 MOL_ID: 3; SOURCE 18 SYNTHETIC: YES; SOURCE 19 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 20 ORGANISM_TAXID: 4932; SOURCE 21 OTHER_DETAILS: OLIGOS PURCHASED FROM BIOMERS KEYWDS DNA BINDING PROTEIN DNA PACKAGING, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.CHAKRABORTY,S.LYONNAIS,M.SOLA REVDAT 2 13-SEP-17 5JGH 1 REMARK REVDAT 1 08-FEB-17 5JGH 0 JRNL AUTH A.CHAKRABORTY,S.LYONNAIS,F.BATTISTINI,A.HOSPITAL,G.MEDICI, JRNL AUTH 2 R.PROHENS,M.OROZCO,J.VILARDELL,M.SOLA JRNL TITL DNA STRUCTURE DIRECTS POSITIONING OF THE MITOCHONDRIAL JRNL TITL 2 GENOME PACKAGING PROTEIN ABF2P. JRNL REF NUCLEIC ACIDS RES. V. 45 951 2017 JRNL REFN ESSN 1362-4962 JRNL PMID 27899643 JRNL DOI 10.1093/NAR/GKW1147 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 38372 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.760 REMARK 3 FREE R VALUE TEST SET COUNT : 1828 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.0559 - 6.1098 0.93 2794 153 0.1608 0.1871 REMARK 3 2 6.1098 - 4.8510 0.96 2808 149 0.1897 0.2264 REMARK 3 3 4.8510 - 4.2382 0.94 2793 131 0.1930 0.2629 REMARK 3 4 4.2382 - 3.8509 0.96 2807 146 0.2077 0.1984 REMARK 3 5 3.8509 - 3.5750 0.96 2815 153 0.2159 0.2754 REMARK 3 6 3.5750 - 3.3643 0.94 2790 148 0.2307 0.2628 REMARK 3 7 3.3643 - 3.1958 0.95 2806 135 0.2456 0.2949 REMARK 3 8 3.1958 - 3.0567 0.96 2847 117 0.2792 0.3257 REMARK 3 9 3.0567 - 2.9391 0.96 2857 124 0.3123 0.3707 REMARK 3 10 2.9391 - 2.8376 0.97 2820 158 0.3304 0.3480 REMARK 3 11 2.8376 - 2.7489 0.94 2753 140 0.3390 0.3634 REMARK 3 12 2.7489 - 2.6704 0.96 2789 132 0.3535 0.3360 REMARK 3 13 2.6704 - 2.6001 0.96 2865 142 0.3711 0.3776 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.470 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 9330 REMARK 3 ANGLE : 0.996 13307 REMARK 3 CHIRALITY : 0.048 1411 REMARK 3 PLANARITY : 0.008 1096 REMARK 3 DIHEDRAL : 26.514 3875 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JGH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000220489. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976250 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38389 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 48.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : 2.300 REMARK 200 R MERGE (I) : 0.11200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX (1.10.1_2155 REMARK 200 STARTING MODEL: PARTIAL MODEL FROM SAD PHASING REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 4000, 0.2 M AMMONIUM ACETATE, REMARK 280 0.1 M TRI-SODIUM CITRATE PH 4.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 65.99550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, I, J, K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 21 REMARK 465 HIS A 22 REMARK 465 HIS A 23 REMARK 465 HIS A 24 REMARK 465 HIS A 25 REMARK 465 HIS A 26 REMARK 465 ASN A 183 REMARK 465 HIS D 21 REMARK 465 HIS D 22 REMARK 465 HIS D 23 REMARK 465 HIS D 24 REMARK 465 HIS D 25 REMARK 465 HIS D 26 REMARK 465 LEU D 182 REMARK 465 ASN D 183 REMARK 465 HIS G 21 REMARK 465 HIS G 22 REMARK 465 HIS G 23 REMARK 465 HIS G 24 REMARK 465 HIS G 25 REMARK 465 HIS G 26 REMARK 465 ASN G 183 REMARK 465 HIS J 21 REMARK 465 HIS J 22 REMARK 465 HIS J 23 REMARK 465 HIS J 24 REMARK 465 HIS J 25 REMARK 465 HIS J 26 REMARK 465 LYS J 27 REMARK 465 ALA J 28 REMARK 465 SER J 29 REMARK 465 LYS J 30 REMARK 465 LEU J 182 REMARK 465 ASN J 183 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU G 182 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 31 OP1 DT B 8 2.08 REMARK 500 OE1 GLU D 129 OH TYR D 165 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT C 6 O3' DT C 6 C3' -0.039 REMARK 500 DT H 2 O3' DT H 2 C3' -0.041 REMARK 500 DT I 6 O3' DT I 6 C3' -0.037 REMARK 500 DT K 5 O3' DT K 5 C3' -0.038 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT C 16 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DT C 19 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DT E 13 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DT E 18 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 DT F 11 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 PRO G 181 C - N - CD ANGL. DEV. = -13.2 DEGREES REMARK 500 DT H 18 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DA I 8 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DT K 18 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DA L 8 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO G 181 29.94 -72.80 REMARK 500 TYR J 180 172.25 169.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT G 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT G 202 DBREF 5JGH A 27 183 UNP Q02486 ABF2_YEAST 27 183 DBREF 5JGH B 1 22 PDB 5JGH 5JGH 1 22 DBREF 5JGH C 1 22 PDB 5JGH 5JGH 1 22 DBREF 5JGH D 27 183 UNP Q02486 ABF2_YEAST 27 183 DBREF 5JGH E 1 22 PDB 5JGH 5JGH 1 22 DBREF 5JGH F 1 22 PDB 5JGH 5JGH 1 22 DBREF 5JGH G 27 183 UNP Q02486 ABF2_YEAST 27 183 DBREF 5JGH H 1 22 PDB 5JGH 5JGH 1 22 DBREF 5JGH I 1 22 PDB 5JGH 5JGH 1 22 DBREF 5JGH J 27 183 UNP Q02486 ABF2_YEAST 27 183 DBREF 5JGH K 1 22 PDB 5JGH 5JGH 1 22 DBREF 5JGH L 1 22 PDB 5JGH 5JGH 1 22 SEQADV 5JGH HIS A 21 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS A 22 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS A 23 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS A 24 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS A 25 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS A 26 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS D 21 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS D 22 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS D 23 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS D 24 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS D 25 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS D 26 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS G 21 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS G 22 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS G 23 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS G 24 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS G 25 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS G 26 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS J 21 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS J 22 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS J 23 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS J 24 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS J 25 UNP Q02486 EXPRESSION TAG SEQADV 5JGH HIS J 26 UNP Q02486 EXPRESSION TAG SEQRES 1 A 163 HIS HIS HIS HIS HIS HIS LYS ALA SER LYS ARG THR GLN SEQRES 2 A 163 LEU ARG ASN GLU LEU ILE LYS GLN GLY PRO LYS ARG PRO SEQRES 3 A 163 THR SER ALA TYR PHE LEU TYR LEU GLN ASP HIS ARG SER SEQRES 4 A 163 GLN PHE VAL LYS GLU ASN PRO THR LEU ARG PRO ALA GLU SEQRES 5 A 163 ILE SER LYS ILE ALA GLY GLU LYS TRP GLN ASN LEU GLU SEQRES 6 A 163 ALA ASP ILE LYS GLU LYS TYR ILE SER GLU ARG LYS LYS SEQRES 7 A 163 LEU TYR SER GLU TYR GLN LYS ALA LYS LYS GLU PHE ASP SEQRES 8 A 163 GLU LYS LEU PRO PRO LYS LYS PRO ALA GLY PRO PHE ILE SEQRES 9 A 163 LYS TYR ALA ASN GLU VAL ARG SER GLN VAL PHE ALA GLN SEQRES 10 A 163 HIS PRO ASP LYS SER GLN LEU ASP LEU MET LYS ILE ILE SEQRES 11 A 163 GLY ASP LYS TRP GLN SER LEU ASP GLN SER ILE LYS ASP SEQRES 12 A 163 LYS TYR ILE GLN GLU TYR LYS LYS ALA ILE GLN GLU TYR SEQRES 13 A 163 ASN ALA ARG TYR PRO LEU ASN SEQRES 1 B 22 DT DT DT DA DT DT DA DT DT DT DT DA DT SEQRES 2 B 22 DA DT DT DA DT DA DT DA DA SEQRES 1 C 22 DT DT DA DT DA DT DA DA DT DA DT DA DA SEQRES 2 C 22 DA DA DT DA DA DT DA DA DA SEQRES 1 D 163 HIS HIS HIS HIS HIS HIS LYS ALA SER LYS ARG THR GLN SEQRES 2 D 163 LEU ARG ASN GLU LEU ILE LYS GLN GLY PRO LYS ARG PRO SEQRES 3 D 163 THR SER ALA TYR PHE LEU TYR LEU GLN ASP HIS ARG SER SEQRES 4 D 163 GLN PHE VAL LYS GLU ASN PRO THR LEU ARG PRO ALA GLU SEQRES 5 D 163 ILE SER LYS ILE ALA GLY GLU LYS TRP GLN ASN LEU GLU SEQRES 6 D 163 ALA ASP ILE LYS GLU LYS TYR ILE SER GLU ARG LYS LYS SEQRES 7 D 163 LEU TYR SER GLU TYR GLN LYS ALA LYS LYS GLU PHE ASP SEQRES 8 D 163 GLU LYS LEU PRO PRO LYS LYS PRO ALA GLY PRO PHE ILE SEQRES 9 D 163 LYS TYR ALA ASN GLU VAL ARG SER GLN VAL PHE ALA GLN SEQRES 10 D 163 HIS PRO ASP LYS SER GLN LEU ASP LEU MET LYS ILE ILE SEQRES 11 D 163 GLY ASP LYS TRP GLN SER LEU ASP GLN SER ILE LYS ASP SEQRES 12 D 163 LYS TYR ILE GLN GLU TYR LYS LYS ALA ILE GLN GLU TYR SEQRES 13 D 163 ASN ALA ARG TYR PRO LEU ASN SEQRES 1 E 22 DT DT DT DA DT DT DA DT DT DT DT DA DT SEQRES 2 E 22 DA DT DT DA DT DA DT DA DA SEQRES 1 F 22 DT DT DA DT DA DT DA DA DT DA DT DA DA SEQRES 2 F 22 DA DA DT DA DA DT DA DA DA SEQRES 1 G 163 HIS HIS HIS HIS HIS HIS LYS ALA SER LYS ARG THR GLN SEQRES 2 G 163 LEU ARG ASN GLU LEU ILE LYS GLN GLY PRO LYS ARG PRO SEQRES 3 G 163 THR SER ALA TYR PHE LEU TYR LEU GLN ASP HIS ARG SER SEQRES 4 G 163 GLN PHE VAL LYS GLU ASN PRO THR LEU ARG PRO ALA GLU SEQRES 5 G 163 ILE SER LYS ILE ALA GLY GLU LYS TRP GLN ASN LEU GLU SEQRES 6 G 163 ALA ASP ILE LYS GLU LYS TYR ILE SER GLU ARG LYS LYS SEQRES 7 G 163 LEU TYR SER GLU TYR GLN LYS ALA LYS LYS GLU PHE ASP SEQRES 8 G 163 GLU LYS LEU PRO PRO LYS LYS PRO ALA GLY PRO PHE ILE SEQRES 9 G 163 LYS TYR ALA ASN GLU VAL ARG SER GLN VAL PHE ALA GLN SEQRES 10 G 163 HIS PRO ASP LYS SER GLN LEU ASP LEU MET LYS ILE ILE SEQRES 11 G 163 GLY ASP LYS TRP GLN SER LEU ASP GLN SER ILE LYS ASP SEQRES 12 G 163 LYS TYR ILE GLN GLU TYR LYS LYS ALA ILE GLN GLU TYR SEQRES 13 G 163 ASN ALA ARG TYR PRO LEU ASN SEQRES 1 H 22 DT DT DT DA DT DT DA DT DT DT DT DA DT SEQRES 2 H 22 DA DT DT DA DT DA DT DA DA SEQRES 1 I 22 DT DT DA DT DA DT DA DA DT DA DT DA DA SEQRES 2 I 22 DA DA DT DA DA DT DA DA DA SEQRES 1 J 163 HIS HIS HIS HIS HIS HIS LYS ALA SER LYS ARG THR GLN SEQRES 2 J 163 LEU ARG ASN GLU LEU ILE LYS GLN GLY PRO LYS ARG PRO SEQRES 3 J 163 THR SER ALA TYR PHE LEU TYR LEU GLN ASP HIS ARG SER SEQRES 4 J 163 GLN PHE VAL LYS GLU ASN PRO THR LEU ARG PRO ALA GLU SEQRES 5 J 163 ILE SER LYS ILE ALA GLY GLU LYS TRP GLN ASN LEU GLU SEQRES 6 J 163 ALA ASP ILE LYS GLU LYS TYR ILE SER GLU ARG LYS LYS SEQRES 7 J 163 LEU TYR SER GLU TYR GLN LYS ALA LYS LYS GLU PHE ASP SEQRES 8 J 163 GLU LYS LEU PRO PRO LYS LYS PRO ALA GLY PRO PHE ILE SEQRES 9 J 163 LYS TYR ALA ASN GLU VAL ARG SER GLN VAL PHE ALA GLN SEQRES 10 J 163 HIS PRO ASP LYS SER GLN LEU ASP LEU MET LYS ILE ILE SEQRES 11 J 163 GLY ASP LYS TRP GLN SER LEU ASP GLN SER ILE LYS ASP SEQRES 12 J 163 LYS TYR ILE GLN GLU TYR LYS LYS ALA ILE GLN GLU TYR SEQRES 13 J 163 ASN ALA ARG TYR PRO LEU ASN SEQRES 1 K 22 DT DT DT DA DT DT DA DT DT DT DT DA DT SEQRES 2 K 22 DA DT DT DA DT DA DT DA DA SEQRES 1 L 22 DT DT DA DT DA DT DA DA DT DA DT DA DA SEQRES 2 L 22 DA DA DT DA DA DT DA DA DA HET ACT G 201 4 HET ACT G 202 4 HETNAM ACT ACETATE ION FORMUL 13 ACT 2(C2 H3 O2 1-) FORMUL 15 HOH *126(H2 O) HELIX 1 AA1 SER A 29 GLN A 41 1 13 HELIX 2 AA2 SER A 48 ASN A 65 1 18 HELIX 3 AA3 ARG A 69 ASN A 83 1 15 HELIX 4 AA4 GLU A 85 LEU A 114 1 30 HELIX 5 AA5 GLY A 121 HIS A 138 1 18 HELIX 6 AA6 SER A 142 LEU A 157 1 16 HELIX 7 AA7 ASP A 158 TYR A 180 1 23 HELIX 8 AA8 SER D 29 GLN D 41 1 13 HELIX 9 AA9 SER D 48 ASN D 65 1 18 HELIX 10 AB1 ARG D 69 LEU D 84 1 16 HELIX 11 AB2 GLU D 85 LEU D 114 1 30 HELIX 12 AB3 GLY D 121 HIS D 138 1 18 HELIX 13 AB4 SER D 142 LEU D 157 1 16 HELIX 14 AB5 ASP D 158 TYR D 180 1 23 HELIX 15 AB6 SER G 29 GLN G 41 1 13 HELIX 16 AB7 SER G 48 ASN G 65 1 18 HELIX 17 AB8 ARG G 69 ASN G 83 1 15 HELIX 18 AB9 GLU G 85 LEU G 114 1 30 HELIX 19 AC1 GLY G 121 HIS G 138 1 18 HELIX 20 AC2 SER G 142 LEU G 157 1 16 HELIX 21 AC3 ASP G 158 TYR G 180 1 23 HELIX 22 AC4 THR J 32 GLN J 41 1 10 HELIX 23 AC5 SER J 48 ASN J 65 1 18 HELIX 24 AC6 ARG J 69 LEU J 84 1 16 HELIX 25 AC7 GLU J 85 LYS J 113 1 29 HELIX 26 AC8 GLY J 121 HIS J 138 1 18 HELIX 27 AC9 SER J 142 LEU J 157 1 16 HELIX 28 AD1 ASP J 158 ASN J 177 1 20 SITE 1 AC1 4 PRO G 119 GLY G 121 TYR G 169 DT H 6 SITE 1 AC2 1 PRO G 66 CRYST1 71.989 131.991 71.994 90.00 103.21 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013891 0.000000 0.003261 0.00000 SCALE2 0.000000 0.007576 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014268 0.00000