HEADER TRANSPORT PROTEIN 21-APR-16 5JHO TITLE CRYSTAL STRUCTURE OF THE REGULATORY DOMAIN OF THE SODIUM DRIVEN TITLE 2 CHLORIDE BICARBONATE EXCHANGER. COMPND MOL_ID: 1; COMPND 2 MOLECULE: ELECTRONEUTRAL SODIUM BICARBONATE EXCHANGER 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ELECTRONEUTRAL NA(+)-DRIVEN CL-HCO3 EXCHANGER,SOLUTE CARRIER COMPND 5 FAMILY 4 MEMBER 8,K-NBC3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SLC4A8, KIAA0739, NBC, NBC3, NDCBE1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PETM11 KEYWDS MEMBRANE PROTEIN, BICARBONATE EXCHANGER, ANION TRANSPORT, TRANSPORT KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.ALVADIA,T.SOMMER,K.BJERREGAARD-ANDERSEN,J.P.MORTH REVDAT 4 08-MAY-24 5JHO 1 REMARK REVDAT 3 31-JAN-18 5JHO 1 REMARK REVDAT 2 04-OCT-17 5JHO 1 JRNL REVDAT 1 16-AUG-17 5JHO 0 JRNL AUTH C.M.ALVADIA,T.SOMMER,K.BJERREGAARD-ANDERSEN,H.H.DAMKIER, JRNL AUTH 2 M.MONTRASIO,C.AALKJAER,J.P.MORTH JRNL TITL THE CRYSTAL STRUCTURE OF THE REGULATORY DOMAIN OF THE HUMAN JRNL TITL 2 SODIUM-DRIVEN CHLORIDE/BICARBONATE EXCHANGER. JRNL REF SCI REP V. 7 12131 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 28935959 JRNL DOI 10.1038/S41598-017-12409-0 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 26275 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1334 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.9889 - 6.0100 1.00 2695 140 0.1817 0.2224 REMARK 3 2 6.0100 - 4.7812 1.00 2538 151 0.1827 0.2058 REMARK 3 3 4.7812 - 4.1800 1.00 2519 122 0.1632 0.2041 REMARK 3 4 4.1800 - 3.7993 1.00 2474 143 0.2043 0.2458 REMARK 3 5 3.7993 - 3.5278 1.00 2476 136 0.2286 0.2636 REMARK 3 6 3.5278 - 3.3203 1.00 2472 135 0.2362 0.2622 REMARK 3 7 3.3203 - 3.1543 1.00 2417 142 0.2406 0.2826 REMARK 3 8 3.1543 - 3.0173 1.00 2474 131 0.2496 0.3053 REMARK 3 9 3.0173 - 2.9013 1.00 2454 111 0.2734 0.2974 REMARK 3 10 2.9013 - 2.8013 1.00 2422 123 0.2985 0.3486 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 76.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3849 REMARK 3 ANGLE : 1.394 5210 REMARK 3 CHIRALITY : 0.054 598 REMARK 3 PLANARITY : 0.007 675 REMARK 3 DIHEDRAL : 14.196 1440 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 43 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.3773 92.4226 80.3484 REMARK 3 T TENSOR REMARK 3 T11: 1.5951 T22: 1.1113 REMARK 3 T33: 1.4753 T12: -0.0014 REMARK 3 T13: 0.2516 T23: 0.6297 REMARK 3 L TENSOR REMARK 3 L11: 7.5227 L22: 0.0285 REMARK 3 L33: 3.6330 L12: -0.1999 REMARK 3 L13: 0.1902 L23: 0.3014 REMARK 3 S TENSOR REMARK 3 S11: -0.3693 S12: 1.6796 S13: 2.8506 REMARK 3 S21: -0.7635 S22: -0.4553 S23: -1.6673 REMARK 3 S31: -1.4137 S32: 0.5189 S33: -0.3414 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 63 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.0834 80.4229 98.8393 REMARK 3 T TENSOR REMARK 3 T11: 0.8112 T22: 0.9744 REMARK 3 T33: 0.6983 T12: 0.2893 REMARK 3 T13: -0.0985 T23: -0.0210 REMARK 3 L TENSOR REMARK 3 L11: 6.1123 L22: 3.5278 REMARK 3 L33: 5.1228 L12: -1.2218 REMARK 3 L13: 0.5625 L23: 0.1504 REMARK 3 S TENSOR REMARK 3 S11: -0.3802 S12: -1.2411 S13: 0.2498 REMARK 3 S21: 0.2952 S22: 0.6062 S23: 0.1378 REMARK 3 S31: -0.5539 S32: -0.4354 S33: -0.3256 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 134 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): -43.8537 78.7598 84.2581 REMARK 3 T TENSOR REMARK 3 T11: 1.1405 T22: 1.1944 REMARK 3 T33: 1.1105 T12: 0.2341 REMARK 3 T13: -0.2767 T23: 0.0287 REMARK 3 L TENSOR REMARK 3 L11: 4.0731 L22: 7.1205 REMARK 3 L33: 5.3850 L12: 4.8262 REMARK 3 L13: -3.5722 L23: -6.0127 REMARK 3 S TENSOR REMARK 3 S11: -0.6225 S12: -0.1928 S13: -1.1122 REMARK 3 S21: -1.1265 S22: 0.9912 S23: 0.7464 REMARK 3 S31: 0.8383 S32: -1.5490 S33: -0.3164 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 153 THROUGH 254 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.2064 82.3786 97.7807 REMARK 3 T TENSOR REMARK 3 T11: 0.8991 T22: 1.2633 REMARK 3 T33: 0.8870 T12: 0.3793 REMARK 3 T13: -0.1802 T23: 0.0450 REMARK 3 L TENSOR REMARK 3 L11: 8.9448 L22: 8.4322 REMARK 3 L33: 5.7227 L12: 0.9077 REMARK 3 L13: -1.6435 L23: -2.3435 REMARK 3 S TENSOR REMARK 3 S11: -0.4321 S12: -1.6869 S13: 1.3053 REMARK 3 S21: -0.1062 S22: 0.4232 S23: 1.2537 REMARK 3 S31: -0.5339 S32: -0.8664 S33: 0.0233 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 255 THROUGH 344 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.2846 81.1039 90.9981 REMARK 3 T TENSOR REMARK 3 T11: 0.6647 T22: 0.5546 REMARK 3 T33: 0.4577 T12: 0.2186 REMARK 3 T13: -0.0717 T23: -0.0395 REMARK 3 L TENSOR REMARK 3 L11: 8.5796 L22: 4.4505 REMARK 3 L33: 4.6116 L12: -2.7803 REMARK 3 L13: 0.4363 L23: -0.2882 REMARK 3 S TENSOR REMARK 3 S11: 0.0396 S12: -0.0577 S13: 0.6485 REMARK 3 S21: -0.3704 S22: 0.0377 S23: -0.2537 REMARK 3 S31: -0.1665 S32: -0.1979 S33: -0.1262 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 42 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.5338 47.2950 94.3655 REMARK 3 T TENSOR REMARK 3 T11: 0.6738 T22: 0.7069 REMARK 3 T33: 1.3566 T12: -0.2703 REMARK 3 T13: 0.0411 T23: 0.1982 REMARK 3 L TENSOR REMARK 3 L11: 8.3326 L22: 0.4614 REMARK 3 L33: 7.6036 L12: -0.8779 REMARK 3 L13: 1.4664 L23: 1.4688 REMARK 3 S TENSOR REMARK 3 S11: -0.3406 S12: 0.0965 S13: -1.0953 REMARK 3 S21: 0.3119 S22: 0.2546 S23: 1.6179 REMARK 3 S31: 1.1640 S32: -0.1509 S33: 0.2107 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 63 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.9346 65.5698 90.1674 REMARK 3 T TENSOR REMARK 3 T11: 0.6448 T22: 0.4900 REMARK 3 T33: 0.6363 T12: 0.0711 REMARK 3 T13: 0.1440 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 4.9949 L22: 2.9440 REMARK 3 L33: 7.9978 L12: -0.4812 REMARK 3 L13: -1.3231 L23: -0.1836 REMARK 3 S TENSOR REMARK 3 S11: 0.2824 S12: -0.0327 S13: 0.1075 REMARK 3 S21: -0.6269 S22: -0.0223 S23: -0.4147 REMARK 3 S31: -0.8125 S32: 0.4180 S33: -0.2286 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 134 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.2977 53.2396 73.4833 REMARK 3 T TENSOR REMARK 3 T11: 1.3527 T22: 0.9386 REMARK 3 T33: 0.7594 T12: 0.2298 REMARK 3 T13: 0.1139 T23: -0.2051 REMARK 3 L TENSOR REMARK 3 L11: 8.4657 L22: 6.7529 REMARK 3 L33: 3.9494 L12: 4.1967 REMARK 3 L13: -5.5952 L23: -1.6857 REMARK 3 S TENSOR REMARK 3 S11: -0.7204 S12: 1.0300 S13: -0.7208 REMARK 3 S21: -1.5100 S22: 0.6653 S23: 0.0508 REMARK 3 S31: 0.5640 S32: -0.5338 S33: 0.1298 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 153 THROUGH 236 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.4329 61.4793 86.2317 REMARK 3 T TENSOR REMARK 3 T11: 0.8728 T22: 0.9962 REMARK 3 T33: 1.0446 T12: 0.2122 REMARK 3 T13: 0.3146 T23: 0.0260 REMARK 3 L TENSOR REMARK 3 L11: 6.1313 L22: 7.1685 REMARK 3 L33: 5.6334 L12: 0.9162 REMARK 3 L13: -4.8916 L23: 2.7656 REMARK 3 S TENSOR REMARK 3 S11: -0.1515 S12: -0.0703 S13: -0.1444 REMARK 3 S21: -0.6779 S22: -0.3642 S23: -1.1847 REMARK 3 S31: 0.2474 S32: 2.5642 S33: -0.2547 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 237 THROUGH 344 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0448 59.8373 89.7119 REMARK 3 T TENSOR REMARK 3 T11: 0.5516 T22: 0.4038 REMARK 3 T33: 0.4424 T12: 0.0482 REMARK 3 T13: 0.0290 T23: -0.0542 REMARK 3 L TENSOR REMARK 3 L11: 6.1683 L22: 4.8185 REMARK 3 L33: 6.8885 L12: -1.4737 REMARK 3 L13: -0.6100 L23: -0.1230 REMARK 3 S TENSOR REMARK 3 S11: -0.0279 S12: 0.2315 S13: -0.1772 REMARK 3 S21: -0.3015 S22: -0.0246 S23: -0.0681 REMARK 3 S31: 0.0820 S32: -0.1712 S33: 0.0544 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JHO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000220270. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918409 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26378 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 69.320 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.90 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 30.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 10.90 REMARK 200 R MERGE FOR SHELL (I) : 1.00000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: BIPYMIDAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40 MG/ML PROTEIN, 100 MM FORMIC ACID , REMARK 280 PH 4.4, 9 % PEG 8000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+1/4 REMARK 290 8555 -Y,-X,-Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.43500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 159.65250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 53.21750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 106.43500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 53.21750 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 159.65250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 LEU A 3 REMARK 465 GLY A 4 REMARK 465 ARG A 5 REMARK 465 GLN A 6 REMARK 465 SER A 7 REMARK 465 HIS A 8 REMARK 465 ARG A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 ARG A 12 REMARK 465 THR A 13 REMARK 465 HIS A 14 REMARK 465 GLY A 15 REMARK 465 GLN A 16 REMARK 465 LYS A 17 REMARK 465 HIS A 18 REMARK 465 ARG A 19 REMARK 465 ARG A 20 REMARK 465 ARG A 21 REMARK 465 GLY A 22 REMARK 465 ARG A 23 REMARK 465 GLY A 24 REMARK 465 LYS A 25 REMARK 465 GLY A 26 REMARK 465 ALA A 27 REMARK 465 SER A 28 REMARK 465 GLN A 29 REMARK 465 GLY A 30 REMARK 465 GLU A 31 REMARK 465 GLU A 32 REMARK 465 GLY A 33 REMARK 465 LEU A 34 REMARK 465 GLU A 35 REMARK 465 ALA A 36 REMARK 465 LEU A 37 REMARK 465 ALA A 38 REMARK 465 HIS A 39 REMARK 465 ASP A 40 REMARK 465 THR A 41 REMARK 465 LYS A 174 REMARK 465 ARG A 175 REMARK 465 ASN A 176 REMARK 465 ASN A 177 REMARK 465 LEU A 178 REMARK 465 ILE A 179 REMARK 465 PRO A 180 REMARK 465 ILE A 181 REMARK 465 VAL A 182 REMARK 465 ARG A 183 REMARK 465 SER A 184 REMARK 465 PHE A 185 REMARK 465 ALA A 186 REMARK 465 GLU A 187 REMARK 465 VAL A 188 REMARK 465 GLY A 189 REMARK 465 LYS A 190 REMARK 465 LYS A 191 REMARK 465 GLN A 192 REMARK 465 SER A 193 REMARK 465 ASP A 194 REMARK 465 PRO A 195 REMARK 465 HIS A 196 REMARK 465 LEU A 197 REMARK 465 MET A 198 REMARK 465 ASP A 199 REMARK 465 LYS A 200 REMARK 465 HIS A 201 REMARK 465 GLY A 202 REMARK 465 GLN A 203 REMARK 465 THR A 204 REMARK 465 VAL A 205 REMARK 465 SER A 206 REMARK 465 PRO A 207 REMARK 465 GLN A 208 REMARK 465 SER A 209 REMARK 465 VAL A 210 REMARK 465 PRO A 211 REMARK 465 THR A 212 REMARK 465 THR A 213 REMARK 465 ASN A 214 REMARK 465 LEU A 215 REMARK 465 GLU A 216 REMARK 465 VAL A 217 REMARK 465 LYS A 218 REMARK 465 ASN A 219 REMARK 465 GLY A 220 REMARK 465 VAL A 221 REMARK 465 ASN A 222 REMARK 465 CYS A 223 REMARK 465 GLU A 224 REMARK 465 HIS A 225 REMARK 465 SER A 226 REMARK 465 PRO A 227 REMARK 465 VAL A 228 REMARK 465 ASP A 229 REMARK 465 LEU A 230 REMARK 465 SER A 231 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 LEU B 3 REMARK 465 GLY B 4 REMARK 465 ARG B 5 REMARK 465 GLN B 6 REMARK 465 SER B 7 REMARK 465 HIS B 8 REMARK 465 ARG B 9 REMARK 465 HIS B 10 REMARK 465 HIS B 11 REMARK 465 ARG B 12 REMARK 465 THR B 13 REMARK 465 HIS B 14 REMARK 465 GLY B 15 REMARK 465 GLN B 16 REMARK 465 LYS B 17 REMARK 465 HIS B 18 REMARK 465 ARG B 19 REMARK 465 ARG B 20 REMARK 465 ARG B 21 REMARK 465 GLY B 22 REMARK 465 ARG B 23 REMARK 465 GLY B 24 REMARK 465 LYS B 25 REMARK 465 GLY B 26 REMARK 465 ALA B 27 REMARK 465 SER B 28 REMARK 465 GLN B 29 REMARK 465 GLY B 30 REMARK 465 GLU B 31 REMARK 465 GLU B 32 REMARK 465 GLY B 33 REMARK 465 LEU B 34 REMARK 465 GLU B 35 REMARK 465 ALA B 36 REMARK 465 LEU B 37 REMARK 465 ALA B 38 REMARK 465 HIS B 39 REMARK 465 ASP B 40 REMARK 465 THR B 41 REMARK 465 PRO B 42 REMARK 465 LYS B 73 REMARK 465 GLU B 74 REMARK 465 GLY B 75 REMARK 465 GLU B 76 REMARK 465 ASP B 77 REMARK 465 GLU B 172 REMARK 465 LYS B 173 REMARK 465 LYS B 174 REMARK 465 ARG B 175 REMARK 465 ASN B 176 REMARK 465 ASN B 177 REMARK 465 LEU B 178 REMARK 465 ILE B 179 REMARK 465 PRO B 180 REMARK 465 ILE B 181 REMARK 465 VAL B 182 REMARK 465 ARG B 183 REMARK 465 SER B 184 REMARK 465 PHE B 185 REMARK 465 ALA B 186 REMARK 465 GLU B 187 REMARK 465 VAL B 188 REMARK 465 GLY B 189 REMARK 465 LYS B 190 REMARK 465 LYS B 191 REMARK 465 GLN B 192 REMARK 465 SER B 193 REMARK 465 ASP B 194 REMARK 465 PRO B 195 REMARK 465 HIS B 196 REMARK 465 LEU B 197 REMARK 465 MET B 198 REMARK 465 ASP B 199 REMARK 465 LYS B 200 REMARK 465 HIS B 201 REMARK 465 GLY B 202 REMARK 465 GLN B 203 REMARK 465 THR B 204 REMARK 465 VAL B 205 REMARK 465 SER B 206 REMARK 465 PRO B 207 REMARK 465 GLN B 208 REMARK 465 SER B 209 REMARK 465 VAL B 210 REMARK 465 PRO B 211 REMARK 465 THR B 212 REMARK 465 THR B 213 REMARK 465 ASN B 214 REMARK 465 LEU B 215 REMARK 465 GLU B 216 REMARK 465 VAL B 217 REMARK 465 LYS B 218 REMARK 465 ASN B 219 REMARK 465 GLY B 220 REMARK 465 VAL B 221 REMARK 465 ASN B 222 REMARK 465 CYS B 223 REMARK 465 GLU B 224 REMARK 465 HIS B 225 REMARK 465 SER B 226 REMARK 465 PRO B 227 REMARK 465 VAL B 228 REMARK 465 ASP B 229 REMARK 465 LEU B 230 REMARK 465 SER B 231 REMARK 465 LYS B 232 REMARK 465 VAL B 233 REMARK 465 ASP B 234 REMARK 465 LEU B 235 REMARK 465 HIS B 236 REMARK 465 PHE B 237 REMARK 465 MET B 238 REMARK 465 LYS B 239 REMARK 465 LYS B 240 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 270 C - N - CA ANGL. DEV. = -16.8 DEGREES REMARK 500 PRO A 270 C - N - CD ANGL. DEV. = 13.1 DEGREES REMARK 500 PRO B 270 C - N - CA ANGL. DEV. = -15.9 DEGREES REMARK 500 PRO B 270 C - N - CD ANGL. DEV. = 14.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 57 -23.48 72.38 REMARK 500 LEU A 87 68.06 -167.69 REMARK 500 LYS A 88 -55.85 66.43 REMARK 500 GLU A 172 3.61 58.16 REMARK 500 ASP A 234 -114.15 -131.57 REMARK 500 PRO A 281 80.95 -66.66 REMARK 500 GLU B 57 -23.70 75.20 REMARK 500 HIS B 58 21.12 -76.26 REMARK 500 LEU B 87 68.43 -169.95 REMARK 500 LYS B 88 -54.83 67.96 REMARK 500 PRO B 281 84.73 -64.04 REMARK 500 REMARK 500 REMARK: NULL DBREF 5JHO A 1 344 UNP Q2Y0W8 S4A8_HUMAN 1 344 DBREF 5JHO B 1 344 UNP Q2Y0W8 S4A8_HUMAN 1 344 SEQRES 1 A 344 MET PRO LEU GLY ARG GLN SER HIS ARG HIS HIS ARG THR SEQRES 2 A 344 HIS GLY GLN LYS HIS ARG ARG ARG GLY ARG GLY LYS GLY SEQRES 3 A 344 ALA SER GLN GLY GLU GLU GLY LEU GLU ALA LEU ALA HIS SEQRES 4 A 344 ASP THR PRO SER GLN ARG VAL GLN PHE ILE LEU GLY THR SEQRES 5 A 344 GLU GLU ASP GLU GLU HIS VAL PRO HIS GLU LEU PHE THR SEQRES 6 A 344 GLU LEU ASP GLU ILE CYS MET LYS GLU GLY GLU ASP ALA SEQRES 7 A 344 GLU TRP LYS GLU THR ALA ARG TRP LEU LYS PHE GLU GLU SEQRES 8 A 344 ASP VAL GLU ASP GLY GLY GLU ARG TRP SER LYS PRO TYR SEQRES 9 A 344 VAL ALA THR LEU SER LEU HIS SER LEU PHE GLU LEU ARG SEQRES 10 A 344 SER CYS LEU ILE ASN GLY THR VAL LEU LEU ASP MET HIS SEQRES 11 A 344 ALA ASN SER ILE GLU GLU ILE SER ASP LEU ILE LEU ASP SEQRES 12 A 344 GLN GLN GLU LEU SER SER ASP LEU ASN ASP SER MET ARG SEQRES 13 A 344 VAL LYS VAL ARG GLU ALA LEU LEU LYS LYS HIS HIS HIS SEQRES 14 A 344 GLN ASN GLU LYS LYS ARG ASN ASN LEU ILE PRO ILE VAL SEQRES 15 A 344 ARG SER PHE ALA GLU VAL GLY LYS LYS GLN SER ASP PRO SEQRES 16 A 344 HIS LEU MET ASP LYS HIS GLY GLN THR VAL SER PRO GLN SEQRES 17 A 344 SER VAL PRO THR THR ASN LEU GLU VAL LYS ASN GLY VAL SEQRES 18 A 344 ASN CYS GLU HIS SER PRO VAL ASP LEU SER LYS VAL ASP SEQRES 19 A 344 LEU HIS PHE MET LYS LYS ILE PRO THR GLY ALA GLU ALA SEQRES 20 A 344 SER ASN VAL LEU VAL GLY GLU VAL ASP ILE LEU ASP ARG SEQRES 21 A 344 PRO ILE VAL ALA PHE VAL ARG LEU SER PRO ALA VAL LEU SEQRES 22 A 344 LEU SER GLY LEU THR GLU VAL PRO ILE PRO THR ARG PHE SEQRES 23 A 344 LEU PHE ILE LEU LEU GLY PRO VAL GLY LYS GLY GLN GLN SEQRES 24 A 344 TYR HIS GLU ILE GLY ARG SER MET ALA THR ILE MET THR SEQRES 25 A 344 ASP GLU ILE PHE HIS ASP VAL ALA TYR LYS ALA LYS GLU SEQRES 26 A 344 ARG ASP ASP LEU LEU ALA GLY ILE ASP GLU PHE LEU ASP SEQRES 27 A 344 GLN VAL THR VAL LEU PRO SEQRES 1 B 344 MET PRO LEU GLY ARG GLN SER HIS ARG HIS HIS ARG THR SEQRES 2 B 344 HIS GLY GLN LYS HIS ARG ARG ARG GLY ARG GLY LYS GLY SEQRES 3 B 344 ALA SER GLN GLY GLU GLU GLY LEU GLU ALA LEU ALA HIS SEQRES 4 B 344 ASP THR PRO SER GLN ARG VAL GLN PHE ILE LEU GLY THR SEQRES 5 B 344 GLU GLU ASP GLU GLU HIS VAL PRO HIS GLU LEU PHE THR SEQRES 6 B 344 GLU LEU ASP GLU ILE CYS MET LYS GLU GLY GLU ASP ALA SEQRES 7 B 344 GLU TRP LYS GLU THR ALA ARG TRP LEU LYS PHE GLU GLU SEQRES 8 B 344 ASP VAL GLU ASP GLY GLY GLU ARG TRP SER LYS PRO TYR SEQRES 9 B 344 VAL ALA THR LEU SER LEU HIS SER LEU PHE GLU LEU ARG SEQRES 10 B 344 SER CYS LEU ILE ASN GLY THR VAL LEU LEU ASP MET HIS SEQRES 11 B 344 ALA ASN SER ILE GLU GLU ILE SER ASP LEU ILE LEU ASP SEQRES 12 B 344 GLN GLN GLU LEU SER SER ASP LEU ASN ASP SER MET ARG SEQRES 13 B 344 VAL LYS VAL ARG GLU ALA LEU LEU LYS LYS HIS HIS HIS SEQRES 14 B 344 GLN ASN GLU LYS LYS ARG ASN ASN LEU ILE PRO ILE VAL SEQRES 15 B 344 ARG SER PHE ALA GLU VAL GLY LYS LYS GLN SER ASP PRO SEQRES 16 B 344 HIS LEU MET ASP LYS HIS GLY GLN THR VAL SER PRO GLN SEQRES 17 B 344 SER VAL PRO THR THR ASN LEU GLU VAL LYS ASN GLY VAL SEQRES 18 B 344 ASN CYS GLU HIS SER PRO VAL ASP LEU SER LYS VAL ASP SEQRES 19 B 344 LEU HIS PHE MET LYS LYS ILE PRO THR GLY ALA GLU ALA SEQRES 20 B 344 SER ASN VAL LEU VAL GLY GLU VAL ASP ILE LEU ASP ARG SEQRES 21 B 344 PRO ILE VAL ALA PHE VAL ARG LEU SER PRO ALA VAL LEU SEQRES 22 B 344 LEU SER GLY LEU THR GLU VAL PRO ILE PRO THR ARG PHE SEQRES 23 B 344 LEU PHE ILE LEU LEU GLY PRO VAL GLY LYS GLY GLN GLN SEQRES 24 B 344 TYR HIS GLU ILE GLY ARG SER MET ALA THR ILE MET THR SEQRES 25 B 344 ASP GLU ILE PHE HIS ASP VAL ALA TYR LYS ALA LYS GLU SEQRES 26 B 344 ARG ASP ASP LEU LEU ALA GLY ILE ASP GLU PHE LEU ASP SEQRES 27 B 344 GLN VAL THR VAL LEU PRO FORMUL 3 HOH *5(H2 O) HELIX 1 AA1 GLN A 44 THR A 52 1 9 HELIX 2 AA2 ASP A 95 GLU A 98 5 4 HELIX 3 AA3 LEU A 110 GLY A 123 1 14 HELIX 4 AA4 SER A 133 ASP A 143 1 11 HELIX 5 AA5 ASN A 152 LEU A 164 1 13 HELIX 6 AA6 PHE A 237 ILE A 241 5 5 HELIX 7 AA7 LYS A 296 MET A 311 1 16 HELIX 8 AA8 ASP A 313 ALA A 323 1 11 HELIX 9 AA9 GLU A 325 VAL A 340 1 16 HELIX 10 AB1 GLN B 44 THR B 52 1 9 HELIX 11 AB2 LEU B 110 GLY B 123 1 14 HELIX 12 AB3 SER B 133 ASP B 143 1 11 HELIX 13 AB4 ASN B 152 LEU B 164 1 13 HELIX 14 AB5 LYS B 296 MET B 311 1 16 HELIX 15 AB6 ASP B 313 ALA B 323 1 11 HELIX 16 AB7 GLU B 325 VAL B 340 1 16 SHEET 1 AA1 8 ARG A 99 TRP A 100 0 SHEET 2 AA1 8 GLU A 90 GLU A 94 -1 N GLU A 94 O ARG A 99 SHEET 3 AA1 8 TRP A 80 TRP A 86 -1 N THR A 83 O VAL A 93 SHEET 4 AA1 8 LEU A 63 MET A 72 -1 N LEU A 67 O THR A 83 SHEET 5 AA1 8 GLU A 246 VAL A 255 1 O VAL A 250 N GLU A 66 SHEET 6 AA1 8 THR A 284 GLY A 292 1 O ARG A 285 N ALA A 247 SHEET 7 AA1 8 ILE A 262 VAL A 272 -1 N VAL A 272 O THR A 284 SHEET 8 AA1 8 THR A 124 MET A 129 1 N THR A 124 O VAL A 263 SHEET 1 AA2 4 ARG A 99 TRP A 100 0 SHEET 2 AA2 4 GLU A 90 GLU A 94 -1 N GLU A 94 O ARG A 99 SHEET 3 AA2 4 TRP A 80 TRP A 86 -1 N THR A 83 O VAL A 93 SHEET 4 AA2 4 HIS A 167 HIS A 168 1 O HIS A 168 N TRP A 80 SHEET 1 AA3 4 LEU A 108 SER A 109 0 SHEET 2 AA3 4 THR B 341 LEU B 343 -1 O VAL B 342 N LEU A 108 SHEET 3 AA3 4 THR A 341 LEU A 343 -1 N LEU A 343 O THR B 341 SHEET 4 AA3 4 LEU B 108 SER B 109 -1 O LEU B 108 N VAL A 342 SHEET 1 AA4 8 ARG B 99 TRP B 100 0 SHEET 2 AA4 8 GLU B 90 GLU B 94 -1 N GLU B 94 O ARG B 99 SHEET 3 AA4 8 TRP B 80 TRP B 86 -1 N THR B 83 O VAL B 93 SHEET 4 AA4 8 LEU B 63 CYS B 71 -1 N LEU B 67 O THR B 83 SHEET 5 AA4 8 GLU B 246 GLU B 254 1 O VAL B 250 N GLU B 66 SHEET 6 AA4 8 THR B 284 GLY B 292 1 O PHE B 288 N LEU B 251 SHEET 7 AA4 8 ILE B 262 VAL B 272 -1 N ILE B 262 O LEU B 291 SHEET 8 AA4 8 THR B 124 MET B 129 1 N THR B 124 O VAL B 263 SHEET 1 AA5 4 ARG B 99 TRP B 100 0 SHEET 2 AA5 4 GLU B 90 GLU B 94 -1 N GLU B 94 O ARG B 99 SHEET 3 AA5 4 TRP B 80 TRP B 86 -1 N THR B 83 O VAL B 93 SHEET 4 AA5 4 HIS B 167 HIS B 168 1 O HIS B 168 N GLU B 82 CRYST1 98.040 98.040 212.870 90.00 90.00 90.00 P 43 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010200 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010200 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004698 0.00000