HEADER LIPID TRANSPORT 23-APR-16 5JJD TITLE CRYSTAL STRUCTURE OF THE CERAMIDE TRANSFER PROTEIN PH AND START DOMAIN TITLE 2 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: COLLAGEN TYPE IV ALPHA-3-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 148-250; COMPND 5 SYNONYM: CERAMIDE TRANSFER PROTEIN,HCERT,GOODPASTURE ANTIGEN-BINDING COMPND 6 PROTEIN,GPBP,START DOMAIN-CONTAINING PROTEIN 11,STARD11,STAR-RELATED COMPND 7 LIPID TRANSFER PROTEIN 11; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: COLLAGEN TYPE IV ALPHA-3-BINDING PROTEIN; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: UNP RESIDUES 359-598; COMPND 13 SYNONYM: CERAMIDE TRANSFER PROTEIN,HCERT,GOODPASTURE ANTIGEN-BINDING COMPND 14 PROTEIN,GPBP,START DOMAIN-CONTAINING PROTEIN 11,STARD11,STAR-RELATED COMPND 15 LIPID TRANSFER PROTEIN 11; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: COL4A3BP, CERT, STARD11; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: COL4A3BP, CERT, STARD11; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CERT, PH, START, COMPLEX, LIPID TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR J.PRASHEK,S.BOUYAIN,X.YAO REVDAT 5 27-SEP-23 5JJD 1 REMARK REVDAT 4 25-DEC-19 5JJD 1 REMARK REVDAT 3 16-JAN-19 5JJD 1 JRNL REVDAT 2 13-SEP-17 5JJD 1 REMARK REVDAT 1 05-JUL-17 5JJD 0 JRNL AUTH J.PRASHEK,S.BOUYAIN,M.FU,Y.LI,D.BERKES,X.YAO JRNL TITL INTERACTION BETWEEN THE PH AND START DOMAINS OF CERAMIDE JRNL TITL 2 TRANSFER PROTEIN COMPETES WITH PHOSPHATIDYLINOSITOL JRNL TITL 3 4-PHOSPHATE BINDING BY THE PH DOMAIN. JRNL REF J. BIOL. CHEM. V. 292 14217 2017 JRNL REFN ESSN 1083-351X JRNL PMID 28652409 JRNL DOI 10.1074/JBC.M117.780007 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 13855 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 690 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.9756 - 4.1073 1.00 2819 151 0.1721 0.2003 REMARK 3 2 4.1073 - 3.2606 1.00 2694 141 0.1855 0.2659 REMARK 3 3 3.2606 - 2.8486 1.00 2659 136 0.2286 0.2725 REMARK 3 4 2.8486 - 2.5882 0.99 2627 141 0.2428 0.2823 REMARK 3 5 2.5882 - 2.4030 0.89 2366 121 0.2624 0.2681 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.280 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2801 REMARK 3 ANGLE : 0.483 3800 REMARK 3 CHIRALITY : 0.045 412 REMARK 3 PLANARITY : 0.003 489 REMARK 3 DIHEDRAL : 10.447 1663 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.8645 -4.3716 -29.3075 REMARK 3 T TENSOR REMARK 3 T11: 0.1666 T22: 0.2752 REMARK 3 T33: 0.1991 T12: 0.0669 REMARK 3 T13: -0.0017 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 3.2543 L22: 7.5484 REMARK 3 L33: 6.9177 L12: 0.7742 REMARK 3 L13: 0.6783 L23: 3.2991 REMARK 3 S TENSOR REMARK 3 S11: -0.3275 S12: -0.7622 S13: -0.0582 REMARK 3 S21: -0.0560 S22: -0.0786 S23: 0.2771 REMARK 3 S31: -0.1363 S32: 0.0775 S33: 0.4163 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 40 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.5330 2.6740 -31.7796 REMARK 3 T TENSOR REMARK 3 T11: 0.3386 T22: 0.3882 REMARK 3 T33: 0.2550 T12: -0.0452 REMARK 3 T13: -0.0141 T23: -0.0392 REMARK 3 L TENSOR REMARK 3 L11: 4.9965 L22: 3.6859 REMARK 3 L33: 6.0360 L12: 0.4623 REMARK 3 L13: 0.3205 L23: -0.9898 REMARK 3 S TENSOR REMARK 3 S11: -0.0225 S12: 0.6444 S13: -0.0457 REMARK 3 S21: -0.5619 S22: 0.1297 S23: -0.4834 REMARK 3 S31: -0.4573 S32: 0.8146 S33: -0.1695 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.8786 -2.6228 -21.9285 REMARK 3 T TENSOR REMARK 3 T11: 0.2468 T22: 0.3570 REMARK 3 T33: 0.2729 T12: 0.0563 REMARK 3 T13: 0.0248 T23: -0.0398 REMARK 3 L TENSOR REMARK 3 L11: 9.3360 L22: 8.8592 REMARK 3 L33: 2.7566 L12: 0.0816 REMARK 3 L13: 0.5942 L23: 0.2417 REMARK 3 S TENSOR REMARK 3 S11: 0.1127 S12: -0.3179 S13: -0.1973 REMARK 3 S21: 0.4660 S22: 0.0256 S23: 0.9825 REMARK 3 S31: -0.3772 S32: -0.5481 S33: -0.1891 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 102 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.8867 6.2163 -17.1548 REMARK 3 T TENSOR REMARK 3 T11: 0.4441 T22: 0.3976 REMARK 3 T33: 0.3536 T12: 0.0224 REMARK 3 T13: 0.0172 T23: -0.1070 REMARK 3 L TENSOR REMARK 3 L11: 3.7174 L22: 5.3474 REMARK 3 L33: 8.9558 L12: -1.8245 REMARK 3 L13: 1.4302 L23: -6.8424 REMARK 3 S TENSOR REMARK 3 S11: -0.3155 S12: -0.2438 S13: 0.4025 REMARK 3 S21: 1.3918 S22: 0.4833 S23: -0.0787 REMARK 3 S31: -1.1178 S32: -0.5026 S33: -0.0976 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 364 THROUGH 381 ) REMARK 3 ORIGIN FOR THE GROUP (A): -59.8197 0.4397 -59.5287 REMARK 3 T TENSOR REMARK 3 T11: 0.3187 T22: 0.3677 REMARK 3 T33: 0.4058 T12: -0.0792 REMARK 3 T13: 0.0769 T23: 0.0858 REMARK 3 L TENSOR REMARK 3 L11: 4.7635 L22: 1.4073 REMARK 3 L33: 6.5005 L12: -1.1332 REMARK 3 L13: -0.9600 L23: -1.8647 REMARK 3 S TENSOR REMARK 3 S11: -0.2782 S12: 0.4579 S13: 0.3108 REMARK 3 S21: -0.1944 S22: -0.1479 S23: -0.5351 REMARK 3 S31: -0.1584 S32: 0.5402 S33: 0.4285 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 382 THROUGH 405 ) REMARK 3 ORIGIN FOR THE GROUP (A): -69.6856 10.1296 -39.3614 REMARK 3 T TENSOR REMARK 3 T11: 0.6022 T22: 0.4918 REMARK 3 T33: 0.4147 T12: 0.0251 REMARK 3 T13: -0.0783 T23: -0.0607 REMARK 3 L TENSOR REMARK 3 L11: 3.9311 L22: 6.4745 REMARK 3 L33: 6.9458 L12: 0.8925 REMARK 3 L13: -1.7156 L23: 0.6847 REMARK 3 S TENSOR REMARK 3 S11: -0.0685 S12: -0.6255 S13: 0.3171 REMARK 3 S21: 1.0354 S22: 0.0923 S23: -0.6532 REMARK 3 S31: -1.0033 S32: 0.1451 S33: -0.0619 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 406 THROUGH 417 ) REMARK 3 ORIGIN FOR THE GROUP (A): -74.3315 16.9247 -54.0529 REMARK 3 T TENSOR REMARK 3 T11: 0.8166 T22: 0.3699 REMARK 3 T33: 0.5804 T12: 0.0570 REMARK 3 T13: -0.0560 T23: -0.0872 REMARK 3 L TENSOR REMARK 3 L11: 5.4393 L22: 3.7386 REMARK 3 L33: 7.4556 L12: 2.2008 REMARK 3 L13: 2.6188 L23: -3.1460 REMARK 3 S TENSOR REMARK 3 S11: -0.2323 S12: 0.5253 S13: 0.7346 REMARK 3 S21: 0.2622 S22: 0.1623 S23: 0.7857 REMARK 3 S31: -2.5510 S32: 0.1063 S33: 0.2120 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 418 THROUGH 428 ) REMARK 3 ORIGIN FOR THE GROUP (A): -67.7164 -1.6212 -38.1112 REMARK 3 T TENSOR REMARK 3 T11: 0.2826 T22: 0.1918 REMARK 3 T33: 0.1994 T12: -0.0646 REMARK 3 T13: 0.0268 T23: -0.0497 REMARK 3 L TENSOR REMARK 3 L11: 4.3465 L22: 4.0018 REMARK 3 L33: 5.0859 L12: -1.9712 REMARK 3 L13: 1.3717 L23: -4.1948 REMARK 3 S TENSOR REMARK 3 S11: 0.1265 S12: -0.4371 S13: 0.0594 REMARK 3 S21: 0.8856 S22: -0.1515 S23: -0.2127 REMARK 3 S31: -0.7941 S32: -0.0393 S33: -0.1216 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 429 THROUGH 489 ) REMARK 3 ORIGIN FOR THE GROUP (A): -75.4367 -7.1656 -54.5414 REMARK 3 T TENSOR REMARK 3 T11: 0.1998 T22: 0.1851 REMARK 3 T33: 0.2307 T12: -0.0243 REMARK 3 T13: 0.0089 T23: -0.0229 REMARK 3 L TENSOR REMARK 3 L11: 3.1246 L22: 2.4584 REMARK 3 L33: 3.8665 L12: 0.2737 REMARK 3 L13: 1.7862 L23: -0.8037 REMARK 3 S TENSOR REMARK 3 S11: -0.1840 S12: 0.1280 S13: 0.0026 REMARK 3 S21: -0.1070 S22: 0.0860 S23: 0.1693 REMARK 3 S31: -0.2139 S32: -0.0700 S33: 0.0578 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 490 THROUGH 533 ) REMARK 3 ORIGIN FOR THE GROUP (A): -66.9690 -2.0524 -54.0688 REMARK 3 T TENSOR REMARK 3 T11: 0.2208 T22: 0.2657 REMARK 3 T33: 0.2603 T12: -0.0476 REMARK 3 T13: -0.0051 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 0.4870 L22: 1.7408 REMARK 3 L33: 1.8230 L12: 0.1082 REMARK 3 L13: -0.7823 L23: 0.6948 REMARK 3 S TENSOR REMARK 3 S11: -0.1242 S12: 0.3835 S13: 0.1753 REMARK 3 S21: -0.1946 S22: 0.0698 S23: -0.0530 REMARK 3 S31: -0.3194 S32: 0.6423 S33: 0.0650 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 534 THROUGH 543 ) REMARK 3 ORIGIN FOR THE GROUP (A): -54.3129 -15.4031 -26.4517 REMARK 3 T TENSOR REMARK 3 T11: 0.3815 T22: 0.4767 REMARK 3 T33: 0.3708 T12: 0.0475 REMARK 3 T13: -0.0287 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 3.2106 L22: 4.1282 REMARK 3 L33: 8.0549 L12: -1.7466 REMARK 3 L13: -0.7705 L23: 5.1757 REMARK 3 S TENSOR REMARK 3 S11: -0.4769 S12: -1.3254 S13: -0.7037 REMARK 3 S21: 1.3679 S22: 0.4329 S23: 0.4717 REMARK 3 S31: 1.2543 S32: 0.0862 S33: 0.1033 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 544 THROUGH 564 ) REMARK 3 ORIGIN FOR THE GROUP (A): -71.2555 1.5601 -45.4399 REMARK 3 T TENSOR REMARK 3 T11: 0.2543 T22: 0.1855 REMARK 3 T33: 0.2125 T12: -0.0080 REMARK 3 T13: 0.0226 T23: -0.0244 REMARK 3 L TENSOR REMARK 3 L11: 2.6024 L22: 3.3569 REMARK 3 L33: 4.8303 L12: -0.0508 REMARK 3 L13: 0.3295 L23: -1.2853 REMARK 3 S TENSOR REMARK 3 S11: -0.2291 S12: -0.1519 S13: 0.4008 REMARK 3 S21: 0.0870 S22: 0.1964 S23: 0.1498 REMARK 3 S31: -0.6964 S32: -0.3428 S33: 0.1995 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 565 THROUGH 598 ) REMARK 3 ORIGIN FOR THE GROUP (A): -75.7759 -4.4104 -41.2371 REMARK 3 T TENSOR REMARK 3 T11: 0.2302 T22: 0.4160 REMARK 3 T33: 0.2522 T12: -0.0046 REMARK 3 T13: 0.0346 T23: -0.0581 REMARK 3 L TENSOR REMARK 3 L11: 4.2618 L22: 8.1140 REMARK 3 L33: 4.8898 L12: -3.3583 REMARK 3 L13: 0.8928 L23: -1.7249 REMARK 3 S TENSOR REMARK 3 S11: -0.2133 S12: -0.4837 S13: -0.0824 REMARK 3 S21: 0.2792 S22: 0.4646 S23: 0.9669 REMARK 3 S31: -0.6247 S32: -0.6777 S33: -0.2274 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JJD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000220582. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13860 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 38.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2E3M, 4HHV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES BIS-TRIS (PH 6.0), 6% (W/V) REMARK 280 POLYETHYLENE GLYCOL 10,000, AND 10 MICRO MOLAR CALCIUM CHLORIDE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.88050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.90200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.45700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.90200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.88050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.45700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 17 REMARK 465 GLU A 18 REMARK 465 PHE A 19 REMARK 465 SER A 20 REMARK 465 GLY A 21 REMARK 465 PRO A 22 REMARK 465 PRO A 23 REMARK 465 TYR A 121 REMARK 465 GLY A 122 REMARK 465 GLY B 353 REMARK 465 HIS B 354 REMARK 465 MET B 355 REMARK 465 ALA B 356 REMARK 465 MET B 357 REMARK 465 GLU B 358 REMARK 465 PHE B 359 REMARK 465 SER B 360 REMARK 465 SER B 361 REMARK 465 VAL B 362 REMARK 465 GLY B 363 REMARK 465 GLY B 387 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 446 HG1 THR B 448 1.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 34 -80.67 -98.90 REMARK 500 GLU A 62 42.78 -80.78 REMARK 500 TYR A 63 32.83 -149.08 REMARK 500 ASN A 91 -145.18 60.08 REMARK 500 ASP B 389 -107.12 29.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE B 604 DBREF 5JJD A 20 122 UNP Q9Y5P4 C43BP_HUMAN 148 250 DBREF 5JJD B 359 598 UNP Q9Y5P4 C43BP_HUMAN 359 598 SEQADV 5JJD GLY A 17 UNP Q9Y5P4 EXPRESSION TAG SEQADV 5JJD GLU A 18 UNP Q9Y5P4 EXPRESSION TAG SEQADV 5JJD PHE A 19 UNP Q9Y5P4 EXPRESSION TAG SEQADV 5JJD GLY B 353 UNP Q9Y5P4 EXPRESSION TAG SEQADV 5JJD HIS B 354 UNP Q9Y5P4 EXPRESSION TAG SEQADV 5JJD MET B 355 UNP Q9Y5P4 EXPRESSION TAG SEQADV 5JJD ALA B 356 UNP Q9Y5P4 EXPRESSION TAG SEQADV 5JJD MET B 357 UNP Q9Y5P4 EXPRESSION TAG SEQADV 5JJD GLU B 358 UNP Q9Y5P4 EXPRESSION TAG SEQRES 1 A 106 GLY GLU PHE SER GLY PRO PRO VAL GLU ARG CYS GLY VAL SEQRES 2 A 106 LEU SER LYS TRP THR ASN TYR ILE HIS GLY TRP GLN ASP SEQRES 3 A 106 ARG TRP VAL VAL LEU LYS ASN ASN ALA LEU SER TYR TYR SEQRES 4 A 106 LYS SER GLU ASP GLU THR GLU TYR GLY CYS ARG GLY SER SEQRES 5 A 106 ILE CYS LEU SER LYS ALA VAL ILE THR PRO HIS ASP PHE SEQRES 6 A 106 ASP GLU CYS ARG PHE ASP ILE SER VAL ASN ASP SER VAL SEQRES 7 A 106 TRP TYR LEU ARG ALA GLN ASP PRO ASP HIS ARG GLN GLN SEQRES 8 A 106 TRP ILE ASP ALA ILE GLU GLN HIS LYS THR GLU SER GLY SEQRES 9 A 106 TYR GLY SEQRES 1 B 246 GLY HIS MET ALA MET GLU PHE SER SER VAL GLY THR HIS SEQRES 2 B 246 ARG PHE VAL GLN LYS VAL GLU GLU MET VAL GLN ASN HIS SEQRES 3 B 246 MET THR TYR SER LEU GLN ASP VAL GLY GLY ASP ALA ASN SEQRES 4 B 246 TRP GLN LEU VAL VAL GLU GLU GLY GLU MET LYS VAL TYR SEQRES 5 B 246 ARG ARG GLU VAL GLU GLU ASN GLY ILE VAL LEU ASP PRO SEQRES 6 B 246 LEU LYS ALA THR HIS ALA VAL LYS GLY VAL THR GLY HIS SEQRES 7 B 246 GLU VAL CYS ASN TYR PHE TRP ASN VAL ASP VAL ARG ASN SEQRES 8 B 246 ASP TRP GLU THR THR ILE GLU ASN PHE HIS VAL VAL GLU SEQRES 9 B 246 THR LEU ALA ASP ASN ALA ILE ILE ILE TYR GLN THR HIS SEQRES 10 B 246 LYS ARG VAL TRP PRO ALA SER GLN ARG ASP VAL LEU TYR SEQRES 11 B 246 LEU SER VAL ILE ARG LYS ILE PRO ALA LEU THR GLU ASN SEQRES 12 B 246 ASP PRO GLU THR TRP ILE VAL CYS ASN PHE SER VAL ASP SEQRES 13 B 246 HIS ASP SER ALA PRO LEU ASN ASN ARG CYS VAL ARG ALA SEQRES 14 B 246 LYS ILE ASN VAL ALA MET ILE CYS GLN THR LEU VAL SER SEQRES 15 B 246 PRO PRO GLU GLY ASN GLN GLU ILE SER ARG ASP ASN ILE SEQRES 16 B 246 LEU CYS LYS ILE THR TYR VAL ALA ASN VAL ASN PRO GLY SEQRES 17 B 246 GLY TRP ALA PRO ALA SER VAL LEU ARG ALA VAL ALA LYS SEQRES 18 B 246 ARG GLU TYR PRO LYS PHE LEU LYS ARG PHE THR SER TYR SEQRES 19 B 246 VAL GLN GLU LYS THR ALA GLY LYS PRO ILE LEU PHE HET PEG B 601 17 HET PEG B 602 17 HET PEG B 603 17 HET PGE B 604 24 HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PGE TRIETHYLENE GLYCOL FORMUL 3 PEG 3(C4 H10 O3) FORMUL 6 PGE C6 H14 O4 FORMUL 7 HOH *78(H2 O) HELIX 1 AA1 SER A 57 GLY A 64 5 8 HELIX 2 AA2 ASP A 101 GLY A 120 1 20 HELIX 3 AA3 PHE B 367 SER B 382 1 16 HELIX 4 AA4 GLY B 388 TRP B 392 5 5 HELIX 5 AA5 THR B 428 ASN B 438 1 11 HELIX 6 AA6 VAL B 439 TRP B 445 5 7 HELIX 7 AA7 SER B 543 ASP B 545 5 3 HELIX 8 AA8 PRO B 564 ALA B 592 1 29 SHEET 1 AA1 7 GLY A 67 CYS A 70 0 SHEET 2 AA1 7 ALA A 51 TYR A 55 -1 N LEU A 52 O ILE A 69 SHEET 3 AA1 7 TRP A 40 LYS A 48 -1 N VAL A 46 O SER A 53 SHEET 4 AA1 7 ARG A 26 TRP A 33 -1 N ARG A 26 O LEU A 47 SHEET 5 AA1 7 SER A 93 ARG A 98 -1 O ARG A 98 N SER A 31 SHEET 6 AA1 7 ARG A 85 VAL A 90 -1 N ILE A 88 O TRP A 95 SHEET 7 AA1 7 VAL A 75 PRO A 78 -1 N THR A 77 O ASP A 87 SHEET 1 AA2 9 GLN B 393 GLU B 398 0 SHEET 2 AA2 9 MET B 401 ARG B 405 -1 O VAL B 403 N VAL B 396 SHEET 3 AA2 9 LEU B 418 LYS B 425 -1 O LYS B 419 N TYR B 404 SHEET 4 AA2 9 ILE B 547 ASN B 558 -1 O ILE B 551 N HIS B 422 SHEET 5 AA2 9 LYS B 522 VAL B 533 -1 N LEU B 532 O LEU B 548 SHEET 6 AA2 9 THR B 499 SER B 506 -1 N ASN B 504 O VAL B 525 SHEET 7 AA2 9 ARG B 478 ILE B 489 -1 N ILE B 489 O THR B 499 SHEET 8 AA2 9 ALA B 462 HIS B 469 -1 N ILE B 463 O SER B 484 SHEET 9 AA2 9 ILE B 449 ALA B 459 -1 N GLU B 450 O THR B 468 SHEET 1 AA3 8 GLN B 393 GLU B 398 0 SHEET 2 AA3 8 MET B 401 ARG B 405 -1 O VAL B 403 N VAL B 396 SHEET 3 AA3 8 LEU B 418 LYS B 425 -1 O LYS B 419 N TYR B 404 SHEET 4 AA3 8 ILE B 547 ASN B 558 -1 O ILE B 551 N HIS B 422 SHEET 5 AA3 8 LYS B 522 VAL B 533 -1 N LEU B 532 O LEU B 548 SHEET 6 AA3 8 THR B 499 SER B 506 -1 N ASN B 504 O VAL B 525 SHEET 7 AA3 8 ARG B 478 ILE B 489 -1 N ILE B 489 O THR B 499 SHEET 8 AA3 8 VAL B 519 ARG B 520 1 O VAL B 519 N ASP B 479 SHEET 1 AA4 2 VAL B 408 GLU B 409 0 SHEET 2 AA4 2 VAL B 414 LEU B 415 -1 O LEU B 415 N VAL B 408 CISPEP 1 TRP B 473 PRO B 474 0 2.62 SITE 1 AC1 2 HIS B 469 PGE B 604 SITE 1 AC2 2 SER B 534 ASN B 546 SITE 1 AC3 2 TRP B 437 ASP B 460 SITE 1 AC4 6 TRP B 445 TYR B 482 ASN B 504 PHE B 579 SITE 2 AC4 6 PEG B 601 HOH B 715 CRYST1 59.761 60.914 95.804 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016733 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016417 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010438 0.00000