data_5JKN # _entry.id 5JKN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.315 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5JKN WWPDB D_1000220438 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5JKN _pdbx_database_status.recvd_initial_deposition_date 2016-04-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Abdul Rehman, S.A.' 1 'Kulathu, Y.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Mol.Cell _citation.journal_id_ASTM MOCEFL _citation.journal_id_CSD 2168 _citation.journal_id_ISSN 1097-2765 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 63 _citation.language ? _citation.page_first 146 _citation.page_last 155 _citation.title 'MINDY-1 Is a Member of an Evolutionarily Conserved and Structurally Distinct New Family of Deubiquitinating Enzymes.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.molcel.2016.05.009 _citation.pdbx_database_id_PubMed 27292798 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Abdul Rehman, S.A.' 1 ? primary 'Kristariyanto, Y.A.' 2 ? primary 'Choi, S.Y.' 3 ? primary 'Nkosi, P.J.' 4 ? primary 'Weidlich, S.' 5 ? primary 'Labib, K.' 6 ? primary 'Hofmann, K.' 7 ? primary 'Kulathu, Y.' 8 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5JKN _cell.details ? _cell.formula_units_Z ? _cell.length_a 99.671 _cell.length_a_esd ? _cell.length_b 99.671 _cell.length_b_esd ? _cell.length_c 165.123 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JKN _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein FAM63A' 32038.217 1 ? ? ? ? 2 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 4 non-polymer syn 'MERCURY (II) ION' 200.590 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSPEFPGRLEMEPDFYCVKWIPWKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSDELMAHLGNCLL SIKPQEKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGK LSYNQLVERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFSTMTKHKSHLYLLVT DQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGSPE ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSPEFPGRLEMEPDFYCVKWIPWKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSDELMAHLGNCLL SIKPQEKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGK LSYNQLVERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFSTMTKHKSHLYLLVT DQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGSPE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 PRO n 1 7 GLU n 1 8 PHE n 1 9 PRO n 1 10 GLY n 1 11 ARG n 1 12 LEU n 1 13 GLU n 1 14 MET n 1 15 GLU n 1 16 PRO n 1 17 ASP n 1 18 PHE n 1 19 TYR n 1 20 CYS n 1 21 VAL n 1 22 LYS n 1 23 TRP n 1 24 ILE n 1 25 PRO n 1 26 TRP n 1 27 LYS n 1 28 GLY n 1 29 GLU n 1 30 GLN n 1 31 THR n 1 32 PRO n 1 33 ILE n 1 34 ILE n 1 35 THR n 1 36 GLN n 1 37 SER n 1 38 THR n 1 39 ASN n 1 40 GLY n 1 41 PRO n 1 42 CYS n 1 43 PRO n 1 44 LEU n 1 45 LEU n 1 46 ALA n 1 47 ILE n 1 48 MET n 1 49 ASN n 1 50 ILE n 1 51 LEU n 1 52 PHE n 1 53 LEU n 1 54 GLN n 1 55 TRP n 1 56 LYS n 1 57 VAL n 1 58 LYS n 1 59 LEU n 1 60 PRO n 1 61 PRO n 1 62 GLN n 1 63 LYS n 1 64 GLU n 1 65 VAL n 1 66 ILE n 1 67 THR n 1 68 SER n 1 69 ASP n 1 70 GLU n 1 71 LEU n 1 72 MET n 1 73 ALA n 1 74 HIS n 1 75 LEU n 1 76 GLY n 1 77 ASN n 1 78 CYS n 1 79 LEU n 1 80 LEU n 1 81 SER n 1 82 ILE n 1 83 LYS n 1 84 PRO n 1 85 GLN n 1 86 GLU n 1 87 LYS n 1 88 SER n 1 89 GLU n 1 90 GLY n 1 91 LEU n 1 92 GLN n 1 93 LEU n 1 94 ASN n 1 95 PHE n 1 96 GLN n 1 97 GLN n 1 98 ASN n 1 99 VAL n 1 100 ASP n 1 101 ASP n 1 102 ALA n 1 103 MET n 1 104 THR n 1 105 VAL n 1 106 LEU n 1 107 PRO n 1 108 LYS n 1 109 LEU n 1 110 ALA n 1 111 THR n 1 112 GLY n 1 113 LEU n 1 114 ASP n 1 115 VAL n 1 116 ASN n 1 117 VAL n 1 118 ARG n 1 119 PHE n 1 120 THR n 1 121 GLY n 1 122 VAL n 1 123 SER n 1 124 ASP n 1 125 PHE n 1 126 GLU n 1 127 TYR n 1 128 THR n 1 129 PRO n 1 130 GLU n 1 131 CYS n 1 132 SER n 1 133 VAL n 1 134 PHE n 1 135 ASP n 1 136 LEU n 1 137 LEU n 1 138 GLY n 1 139 ILE n 1 140 PRO n 1 141 LEU n 1 142 TYR n 1 143 HIS n 1 144 GLY n 1 145 TRP n 1 146 LEU n 1 147 VAL n 1 148 ASP n 1 149 PRO n 1 150 GLN n 1 151 SER n 1 152 PRO n 1 153 GLU n 1 154 ALA n 1 155 VAL n 1 156 ARG n 1 157 ALA n 1 158 VAL n 1 159 GLY n 1 160 LYS n 1 161 LEU n 1 162 SER n 1 163 TYR n 1 164 ASN n 1 165 GLN n 1 166 LEU n 1 167 VAL n 1 168 GLU n 1 169 ARG n 1 170 ILE n 1 171 ILE n 1 172 THR n 1 173 CYS n 1 174 LYS n 1 175 HIS n 1 176 SER n 1 177 SER n 1 178 ASP n 1 179 THR n 1 180 ASN n 1 181 LEU n 1 182 VAL n 1 183 THR n 1 184 GLU n 1 185 GLY n 1 186 LEU n 1 187 ILE n 1 188 ALA n 1 189 GLU n 1 190 GLN n 1 191 PHE n 1 192 LEU n 1 193 GLU n 1 194 THR n 1 195 THR n 1 196 ALA n 1 197 ALA n 1 198 GLN n 1 199 LEU n 1 200 THR n 1 201 TYR n 1 202 HIS n 1 203 GLY n 1 204 LEU n 1 205 CYS n 1 206 GLU n 1 207 LEU n 1 208 THR n 1 209 ALA n 1 210 ALA n 1 211 ALA n 1 212 LYS n 1 213 GLU n 1 214 GLY n 1 215 GLU n 1 216 LEU n 1 217 SER n 1 218 VAL n 1 219 PHE n 1 220 PHE n 1 221 ARG n 1 222 ASN n 1 223 ASN n 1 224 HIS n 1 225 PHE n 1 226 SER n 1 227 THR n 1 228 MET n 1 229 THR n 1 230 LYS n 1 231 HIS n 1 232 LYS n 1 233 SER n 1 234 HIS n 1 235 LEU n 1 236 TYR n 1 237 LEU n 1 238 LEU n 1 239 VAL n 1 240 THR n 1 241 ASP n 1 242 GLN n 1 243 GLY n 1 244 PHE n 1 245 LEU n 1 246 GLN n 1 247 GLU n 1 248 GLU n 1 249 GLN n 1 250 VAL n 1 251 VAL n 1 252 TRP n 1 253 GLU n 1 254 SER n 1 255 LEU n 1 256 HIS n 1 257 ASN n 1 258 VAL n 1 259 ASP n 1 260 GLY n 1 261 ASP n 1 262 SER n 1 263 CYS n 1 264 PHE n 1 265 CYS n 1 266 ASP n 1 267 SER n 1 268 ASP n 1 269 PHE n 1 270 HIS n 1 271 LEU n 1 272 SER n 1 273 HIS n 1 274 SER n 1 275 LEU n 1 276 GLY n 1 277 LYS n 1 278 GLY n 1 279 PRO n 1 280 GLY n 1 281 ALA n 1 282 GLU n 1 283 GLY n 1 284 GLY n 1 285 SER n 1 286 GLY n 1 287 SER n 1 288 PRO n 1 289 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 289 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'FAM63A, KIAA1390' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli ' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX6P1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FA63A_HUMAN _struct_ref.pdbx_db_accession Q8N5J2 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EPDFYCVKWIPWKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLN FQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCK HSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFSTMTKHKSHLYLLVTDQGFLQEEQVVWES LHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGSPE ; _struct_ref.pdbx_align_begin 110 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5JKN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 15 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 289 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8N5J2 _struct_ref_seq.db_align_beg 110 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 384 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 110 _struct_ref_seq.pdbx_auth_seq_align_end 384 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5JKN GLY A 1 ? UNP Q8N5J2 ? ? 'expression tag' 96 1 1 5JKN PRO A 2 ? UNP Q8N5J2 ? ? 'expression tag' 97 2 1 5JKN LEU A 3 ? UNP Q8N5J2 ? ? 'expression tag' 98 3 1 5JKN GLY A 4 ? UNP Q8N5J2 ? ? 'expression tag' 99 4 1 5JKN SER A 5 ? UNP Q8N5J2 ? ? 'expression tag' 100 5 1 5JKN PRO A 6 ? UNP Q8N5J2 ? ? 'expression tag' 101 6 1 5JKN GLU A 7 ? UNP Q8N5J2 ? ? 'expression tag' 102 7 1 5JKN PHE A 8 ? UNP Q8N5J2 ? ? 'expression tag' 103 8 1 5JKN PRO A 9 ? UNP Q8N5J2 ? ? 'expression tag' 104 9 1 5JKN GLY A 10 ? UNP Q8N5J2 ? ? 'expression tag' 105 10 1 5JKN ARG A 11 ? UNP Q8N5J2 ? ? 'expression tag' 106 11 1 5JKN LEU A 12 ? UNP Q8N5J2 ? ? 'expression tag' 107 12 1 5JKN GLU A 13 ? UNP Q8N5J2 ? ? 'expression tag' 108 13 1 5JKN MET A 14 ? UNP Q8N5J2 ? ? 'expression tag' 109 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HG non-polymer . 'MERCURY (II) ION' ? 'Hg 2' 200.590 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5JKN _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100mM Hepes-Na pH 7.5, 200mM NaCl and 25% PEG4000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-06-19 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.93927 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.93927 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID23-1 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5JKN _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.0 _reflns.d_resolution_low 99.67 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 17325 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.0 _reflns.pdbx_Rmerge_I_obs 0.065 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.0 _reflns_shell.d_res_low 3.18 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99.9 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.88 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 5.2 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.866 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 5.56 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] 5.56 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] -11.12 _refine.B_iso_max ? _refine.B_iso_mean 118.197 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.907 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5JKN _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.00 _refine.ls_d_res_low 99.67 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 16430 _refine.ls_number_reflns_R_free 856 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.70 _refine.ls_percent_reflns_R_free 5.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.19907 _refine.ls_R_factor_R_free 0.24231 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.19686 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'Partial model obatined from experimental phasing' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.296 _refine.pdbx_overall_ESU_R_Free 0.260 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 15.275 _refine.overall_SU_ML 0.243 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2002 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2015 _refine_hist.d_res_high 3.00 _refine_hist.d_res_low 99.67 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 0.019 2072 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 1907 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.204 1.948 2826 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.882 3.000 4392 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.245 5.000 256 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.913 25.474 95 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.245 15.000 325 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 10.037 15.000 4 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.068 0.200 324 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 0.021 2348 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 474 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 5.779 11.731 1024 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 5.759 11.727 1023 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 9.334 17.575 1277 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 9.330 17.581 1278 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 5.572 12.278 1048 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 5.567 12.285 1044 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 9.207 18.219 1543 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 12.826 92.873 2199 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 12.824 92.901 2200 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 3.000 _refine_ls_shell.d_res_low 3.078 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 62 _refine_ls_shell.number_reflns_R_work 1169 _refine_ls_shell.percent_reflns_obs 99.92 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.386 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.384 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5JKN _struct.title 'Crystal structure of deubiquitinase MINDY-1' _struct.pdbx_descriptor 'Protein FAM63A' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5JKN _struct_keywords.text 'Hydrolase, Cysteine protease, isopeptidase and Ubiquitin binding' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 43 ? GLN A 54 ? PRO A 138 GLN A 149 1 ? 12 HELX_P HELX_P2 AA2 SER A 68 ? SER A 81 ? SER A 163 SER A 176 1 ? 14 HELX_P HELX_P3 AA3 LEU A 91 ? LEU A 106 ? LEU A 186 LEU A 201 1 ? 16 HELX_P HELX_P4 AA4 PRO A 107 ? ALA A 110 ? PRO A 202 ALA A 205 5 ? 4 HELX_P HELX_P5 AA5 GLU A 130 ? GLY A 138 ? GLU A 225 GLY A 233 1 ? 9 HELX_P HELX_P6 AA6 SER A 151 ? GLY A 159 ? SER A 246 GLY A 254 1 ? 9 HELX_P HELX_P7 AA7 SER A 162 ? HIS A 175 ? SER A 257 HIS A 270 1 ? 14 HELX_P HELX_P8 AA8 ASP A 178 ? THR A 195 ? ASP A 273 THR A 290 1 ? 18 HELX_P HELX_P9 AA9 THR A 200 ? ALA A 211 ? THR A 295 ALA A 306 1 ? 12 HELX_P HELX_P10 AB1 ASP A 241 ? LEU A 245 ? ASP A 336 LEU A 340 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id metalc1 _struct_conn.conn_type_id metalc _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 131 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_comp_id HG _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id HG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 226 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HG _struct_conn.ptnr2_auth_seq_id 403 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.554 _struct_conn.pdbx_value_order ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 29 ? THR A 35 ? GLU A 124 THR A 130 AA1 2 PHE A 18 ? TRP A 26 ? PHE A 113 TRP A 121 AA1 3 VAL A 65 ? THR A 67 ? VAL A 160 THR A 162 AA2 1 LEU A 141 ? HIS A 143 ? LEU A 236 HIS A 238 AA2 2 LEU A 216 ? ARG A 221 ? LEU A 311 ARG A 316 AA2 3 HIS A 224 ? HIS A 231 ? HIS A 319 HIS A 326 AA2 4 HIS A 234 ? LEU A 238 ? HIS A 329 LEU A 333 AA2 5 TRP A 252 ? SER A 254 ? TRP A 347 SER A 349 AA2 6 PHE A 264 ? CYS A 265 ? PHE A 359 CYS A 360 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O THR A 31 ? O THR A 126 N ILE A 24 ? N ILE A 119 AA1 2 3 N TYR A 19 ? N TYR A 114 O ILE A 66 ? O ILE A 161 AA2 1 2 N TYR A 142 ? N TYR A 237 O PHE A 220 ? O PHE A 315 AA2 2 3 N SER A 217 ? N SER A 312 O MET A 228 ? O MET A 323 AA2 3 4 N HIS A 231 ? N HIS A 326 O HIS A 234 ? O HIS A 329 AA2 4 5 N LEU A 237 ? N LEU A 332 O GLU A 253 ? O GLU A 348 AA2 5 6 N TRP A 252 ? N TRP A 347 O CYS A 265 ? O CYS A 360 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PEG 401 ? 3 'binding site for residue PEG A 401' AC2 Software A PO4 402 ? 4 'binding site for residue PO4 A 402' AC3 Software A HG 403 ? 1 'binding site for residue HG A 403' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 VAL A 115 ? VAL A 210 . ? 1_555 ? 2 AC1 3 TYR A 163 ? TYR A 258 . ? 1_555 ? 3 AC1 3 ASN A 223 ? ASN A 318 . ? 1_555 ? 4 AC2 4 PHE A 219 ? PHE A 314 . ? 1_555 ? 5 AC2 4 ARG A 221 ? ARG A 316 . ? 1_555 ? 6 AC2 4 SER A 226 ? SER A 321 . ? 1_555 ? 7 AC2 4 LEU A 237 ? LEU A 332 . ? 1_555 ? 8 AC3 1 CYS A 131 ? CYS A 226 . ? 1_555 ? # _atom_sites.entry_id 5JKN _atom_sites.fract_transf_matrix[1][1] 0.010033 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010033 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006056 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C HG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 96 ? ? ? A . n A 1 2 PRO 2 97 ? ? ? A . n A 1 3 LEU 3 98 ? ? ? A . n A 1 4 GLY 4 99 ? ? ? A . n A 1 5 SER 5 100 ? ? ? A . n A 1 6 PRO 6 101 ? ? ? A . n A 1 7 GLU 7 102 ? ? ? A . n A 1 8 PHE 8 103 ? ? ? A . n A 1 9 PRO 9 104 ? ? ? A . n A 1 10 GLY 10 105 ? ? ? A . n A 1 11 ARG 11 106 ? ? ? A . n A 1 12 LEU 12 107 ? ? ? A . n A 1 13 GLU 13 108 ? ? ? A . n A 1 14 MET 14 109 ? ? ? A . n A 1 15 GLU 15 110 ? ? ? A . n A 1 16 PRO 16 111 111 PRO PRO A . n A 1 17 ASP 17 112 112 ASP ASP A . n A 1 18 PHE 18 113 113 PHE PHE A . n A 1 19 TYR 19 114 114 TYR TYR A . n A 1 20 CYS 20 115 115 CYS CYS A . n A 1 21 VAL 21 116 116 VAL VAL A . n A 1 22 LYS 22 117 117 LYS LYS A . n A 1 23 TRP 23 118 118 TRP TRP A . n A 1 24 ILE 24 119 119 ILE ILE A . n A 1 25 PRO 25 120 120 PRO PRO A . n A 1 26 TRP 26 121 121 TRP TRP A . n A 1 27 LYS 27 122 122 LYS LYS A . n A 1 28 GLY 28 123 123 GLY GLY A . n A 1 29 GLU 29 124 124 GLU GLU A . n A 1 30 GLN 30 125 125 GLN GLN A . n A 1 31 THR 31 126 126 THR THR A . n A 1 32 PRO 32 127 127 PRO PRO A . n A 1 33 ILE 33 128 128 ILE ILE A . n A 1 34 ILE 34 129 129 ILE ILE A . n A 1 35 THR 35 130 130 THR THR A . n A 1 36 GLN 36 131 131 GLN GLN A . n A 1 37 SER 37 132 132 SER SER A . n A 1 38 THR 38 133 133 THR THR A . n A 1 39 ASN 39 134 134 ASN ASN A . n A 1 40 GLY 40 135 135 GLY GLY A . n A 1 41 PRO 41 136 136 PRO PRO A . n A 1 42 CYS 42 137 137 CYS CYS A . n A 1 43 PRO 43 138 138 PRO PRO A . n A 1 44 LEU 44 139 139 LEU LEU A . n A 1 45 LEU 45 140 140 LEU LEU A . n A 1 46 ALA 46 141 141 ALA ALA A . n A 1 47 ILE 47 142 142 ILE ILE A . n A 1 48 MET 48 143 143 MET MET A . n A 1 49 ASN 49 144 144 ASN ASN A . n A 1 50 ILE 50 145 145 ILE ILE A . n A 1 51 LEU 51 146 146 LEU LEU A . n A 1 52 PHE 52 147 147 PHE PHE A . n A 1 53 LEU 53 148 148 LEU LEU A . n A 1 54 GLN 54 149 149 GLN GLN A . n A 1 55 TRP 55 150 150 TRP TRP A . n A 1 56 LYS 56 151 151 LYS LYS A . n A 1 57 VAL 57 152 152 VAL VAL A . n A 1 58 LYS 58 153 153 LYS LYS A . n A 1 59 LEU 59 154 154 LEU LEU A . n A 1 60 PRO 60 155 155 PRO PRO A . n A 1 61 PRO 61 156 156 PRO PRO A . n A 1 62 GLN 62 157 157 GLN GLN A . n A 1 63 LYS 63 158 158 LYS LYS A . n A 1 64 GLU 64 159 159 GLU GLU A . n A 1 65 VAL 65 160 160 VAL VAL A . n A 1 66 ILE 66 161 161 ILE ILE A . n A 1 67 THR 67 162 162 THR THR A . n A 1 68 SER 68 163 163 SER SER A . n A 1 69 ASP 69 164 164 ASP ASP A . n A 1 70 GLU 70 165 165 GLU GLU A . n A 1 71 LEU 71 166 166 LEU LEU A . n A 1 72 MET 72 167 167 MET MET A . n A 1 73 ALA 73 168 168 ALA ALA A . n A 1 74 HIS 74 169 169 HIS HIS A . n A 1 75 LEU 75 170 170 LEU LEU A . n A 1 76 GLY 76 171 171 GLY GLY A . n A 1 77 ASN 77 172 172 ASN ASN A . n A 1 78 CYS 78 173 173 CYS CYS A . n A 1 79 LEU 79 174 174 LEU LEU A . n A 1 80 LEU 80 175 175 LEU LEU A . n A 1 81 SER 81 176 176 SER SER A . n A 1 82 ILE 82 177 177 ILE ILE A . n A 1 83 LYS 83 178 178 LYS LYS A . n A 1 84 PRO 84 179 179 PRO PRO A . n A 1 85 GLN 85 180 180 GLN GLN A . n A 1 86 GLU 86 181 181 GLU GLU A . n A 1 87 LYS 87 182 ? ? ? A . n A 1 88 SER 88 183 ? ? ? A . n A 1 89 GLU 89 184 ? ? ? A . n A 1 90 GLY 90 185 185 GLY GLY A . n A 1 91 LEU 91 186 186 LEU LEU A . n A 1 92 GLN 92 187 187 GLN GLN A . n A 1 93 LEU 93 188 188 LEU LEU A . n A 1 94 ASN 94 189 189 ASN ASN A . n A 1 95 PHE 95 190 190 PHE PHE A . n A 1 96 GLN 96 191 191 GLN GLN A . n A 1 97 GLN 97 192 192 GLN GLN A . n A 1 98 ASN 98 193 193 ASN ASN A . n A 1 99 VAL 99 194 194 VAL VAL A . n A 1 100 ASP 100 195 195 ASP ASP A . n A 1 101 ASP 101 196 196 ASP ASP A . n A 1 102 ALA 102 197 197 ALA ALA A . n A 1 103 MET 103 198 198 MET MET A . n A 1 104 THR 104 199 199 THR THR A . n A 1 105 VAL 105 200 200 VAL VAL A . n A 1 106 LEU 106 201 201 LEU LEU A . n A 1 107 PRO 107 202 202 PRO PRO A . n A 1 108 LYS 108 203 203 LYS LYS A . n A 1 109 LEU 109 204 204 LEU LEU A . n A 1 110 ALA 110 205 205 ALA ALA A . n A 1 111 THR 111 206 206 THR THR A . n A 1 112 GLY 112 207 207 GLY GLY A . n A 1 113 LEU 113 208 208 LEU LEU A . n A 1 114 ASP 114 209 209 ASP ASP A . n A 1 115 VAL 115 210 210 VAL VAL A . n A 1 116 ASN 116 211 211 ASN ASN A . n A 1 117 VAL 117 212 212 VAL VAL A . n A 1 118 ARG 118 213 213 ARG ARG A . n A 1 119 PHE 119 214 214 PHE PHE A . n A 1 120 THR 120 215 215 THR THR A . n A 1 121 GLY 121 216 216 GLY GLY A . n A 1 122 VAL 122 217 217 VAL VAL A . n A 1 123 SER 123 218 218 SER SER A . n A 1 124 ASP 124 219 219 ASP ASP A . n A 1 125 PHE 125 220 220 PHE PHE A . n A 1 126 GLU 126 221 221 GLU GLU A . n A 1 127 TYR 127 222 222 TYR TYR A . n A 1 128 THR 128 223 223 THR THR A . n A 1 129 PRO 129 224 224 PRO PRO A . n A 1 130 GLU 130 225 225 GLU GLU A . n A 1 131 CYS 131 226 226 CYS CYS A . n A 1 132 SER 132 227 227 SER SER A . n A 1 133 VAL 133 228 228 VAL VAL A . n A 1 134 PHE 134 229 229 PHE PHE A . n A 1 135 ASP 135 230 230 ASP ASP A . n A 1 136 LEU 136 231 231 LEU LEU A . n A 1 137 LEU 137 232 232 LEU LEU A . n A 1 138 GLY 138 233 233 GLY GLY A . n A 1 139 ILE 139 234 234 ILE ILE A . n A 1 140 PRO 140 235 235 PRO PRO A . n A 1 141 LEU 141 236 236 LEU LEU A . n A 1 142 TYR 142 237 237 TYR TYR A . n A 1 143 HIS 143 238 238 HIS HIS A . n A 1 144 GLY 144 239 239 GLY GLY A . n A 1 145 TRP 145 240 240 TRP TRP A . n A 1 146 LEU 146 241 241 LEU LEU A . n A 1 147 VAL 147 242 242 VAL VAL A . n A 1 148 ASP 148 243 243 ASP ASP A . n A 1 149 PRO 149 244 244 PRO PRO A . n A 1 150 GLN 150 245 245 GLN GLN A . n A 1 151 SER 151 246 246 SER SER A . n A 1 152 PRO 152 247 247 PRO PRO A . n A 1 153 GLU 153 248 248 GLU GLU A . n A 1 154 ALA 154 249 249 ALA ALA A . n A 1 155 VAL 155 250 250 VAL VAL A . n A 1 156 ARG 156 251 251 ARG ARG A . n A 1 157 ALA 157 252 252 ALA ALA A . n A 1 158 VAL 158 253 253 VAL VAL A . n A 1 159 GLY 159 254 254 GLY GLY A . n A 1 160 LYS 160 255 255 LYS LYS A . n A 1 161 LEU 161 256 256 LEU LEU A . n A 1 162 SER 162 257 257 SER SER A . n A 1 163 TYR 163 258 258 TYR TYR A . n A 1 164 ASN 164 259 259 ASN ASN A . n A 1 165 GLN 165 260 260 GLN GLN A . n A 1 166 LEU 166 261 261 LEU LEU A . n A 1 167 VAL 167 262 262 VAL VAL A . n A 1 168 GLU 168 263 263 GLU GLU A . n A 1 169 ARG 169 264 264 ARG ARG A . n A 1 170 ILE 170 265 265 ILE ILE A . n A 1 171 ILE 171 266 266 ILE ILE A . n A 1 172 THR 172 267 267 THR THR A . n A 1 173 CYS 173 268 268 CYS CYS A . n A 1 174 LYS 174 269 269 LYS LYS A . n A 1 175 HIS 175 270 270 HIS HIS A . n A 1 176 SER 176 271 271 SER SER A . n A 1 177 SER 177 272 272 SER SER A . n A 1 178 ASP 178 273 273 ASP ASP A . n A 1 179 THR 179 274 274 THR THR A . n A 1 180 ASN 180 275 275 ASN ASN A . n A 1 181 LEU 181 276 276 LEU LEU A . n A 1 182 VAL 182 277 277 VAL VAL A . n A 1 183 THR 183 278 278 THR THR A . n A 1 184 GLU 184 279 279 GLU GLU A . n A 1 185 GLY 185 280 280 GLY GLY A . n A 1 186 LEU 186 281 281 LEU LEU A . n A 1 187 ILE 187 282 282 ILE ILE A . n A 1 188 ALA 188 283 283 ALA ALA A . n A 1 189 GLU 189 284 284 GLU GLU A . n A 1 190 GLN 190 285 285 GLN GLN A . n A 1 191 PHE 191 286 286 PHE PHE A . n A 1 192 LEU 192 287 287 LEU LEU A . n A 1 193 GLU 193 288 288 GLU GLU A . n A 1 194 THR 194 289 289 THR THR A . n A 1 195 THR 195 290 290 THR THR A . n A 1 196 ALA 196 291 291 ALA ALA A . n A 1 197 ALA 197 292 292 ALA ALA A . n A 1 198 GLN 198 293 293 GLN GLN A . n A 1 199 LEU 199 294 294 LEU LEU A . n A 1 200 THR 200 295 295 THR THR A . n A 1 201 TYR 201 296 296 TYR TYR A . n A 1 202 HIS 202 297 297 HIS HIS A . n A 1 203 GLY 203 298 298 GLY GLY A . n A 1 204 LEU 204 299 299 LEU LEU A . n A 1 205 CYS 205 300 300 CYS CYS A . n A 1 206 GLU 206 301 301 GLU GLU A . n A 1 207 LEU 207 302 302 LEU LEU A . n A 1 208 THR 208 303 303 THR THR A . n A 1 209 ALA 209 304 304 ALA ALA A . n A 1 210 ALA 210 305 305 ALA ALA A . n A 1 211 ALA 211 306 306 ALA ALA A . n A 1 212 LYS 212 307 307 LYS LYS A . n A 1 213 GLU 213 308 308 GLU GLU A . n A 1 214 GLY 214 309 309 GLY GLY A . n A 1 215 GLU 215 310 310 GLU GLU A . n A 1 216 LEU 216 311 311 LEU LEU A . n A 1 217 SER 217 312 312 SER SER A . n A 1 218 VAL 218 313 313 VAL VAL A . n A 1 219 PHE 219 314 314 PHE PHE A . n A 1 220 PHE 220 315 315 PHE PHE A . n A 1 221 ARG 221 316 316 ARG ARG A . n A 1 222 ASN 222 317 317 ASN ASN A . n A 1 223 ASN 223 318 318 ASN ASN A . n A 1 224 HIS 224 319 319 HIS HIS A . n A 1 225 PHE 225 320 320 PHE PHE A . n A 1 226 SER 226 321 321 SER SER A . n A 1 227 THR 227 322 322 THR THR A . n A 1 228 MET 228 323 323 MET MET A . n A 1 229 THR 229 324 324 THR THR A . n A 1 230 LYS 230 325 325 LYS LYS A . n A 1 231 HIS 231 326 326 HIS HIS A . n A 1 232 LYS 232 327 327 LYS LYS A . n A 1 233 SER 233 328 328 SER SER A . n A 1 234 HIS 234 329 329 HIS HIS A . n A 1 235 LEU 235 330 330 LEU LEU A . n A 1 236 TYR 236 331 331 TYR TYR A . n A 1 237 LEU 237 332 332 LEU LEU A . n A 1 238 LEU 238 333 333 LEU LEU A . n A 1 239 VAL 239 334 334 VAL VAL A . n A 1 240 THR 240 335 335 THR THR A . n A 1 241 ASP 241 336 336 ASP ASP A . n A 1 242 GLN 242 337 337 GLN GLN A . n A 1 243 GLY 243 338 338 GLY GLY A . n A 1 244 PHE 244 339 339 PHE PHE A . n A 1 245 LEU 245 340 340 LEU LEU A . n A 1 246 GLN 246 341 341 GLN GLN A . n A 1 247 GLU 247 342 342 GLU GLU A . n A 1 248 GLU 248 343 343 GLU GLU A . n A 1 249 GLN 249 344 344 GLN GLN A . n A 1 250 VAL 250 345 345 VAL VAL A . n A 1 251 VAL 251 346 346 VAL VAL A . n A 1 252 TRP 252 347 347 TRP TRP A . n A 1 253 GLU 253 348 348 GLU GLU A . n A 1 254 SER 254 349 349 SER SER A . n A 1 255 LEU 255 350 350 LEU LEU A . n A 1 256 HIS 256 351 351 HIS HIS A . n A 1 257 ASN 257 352 352 ASN ASN A . n A 1 258 VAL 258 353 353 VAL VAL A . n A 1 259 ASP 259 354 354 ASP ASP A . n A 1 260 GLY 260 355 355 GLY GLY A . n A 1 261 ASP 261 356 356 ASP ASP A . n A 1 262 SER 262 357 357 SER SER A . n A 1 263 CYS 263 358 358 CYS CYS A . n A 1 264 PHE 264 359 359 PHE PHE A . n A 1 265 CYS 265 360 360 CYS CYS A . n A 1 266 ASP 266 361 361 ASP ASP A . n A 1 267 SER 267 362 362 SER SER A . n A 1 268 ASP 268 363 363 ASP ASP A . n A 1 269 PHE 269 364 364 PHE PHE A . n A 1 270 HIS 270 365 365 HIS HIS A . n A 1 271 LEU 271 366 366 LEU LEU A . n A 1 272 SER 272 367 367 SER SER A . n A 1 273 HIS 273 368 368 HIS HIS A . n A 1 274 SER 274 369 369 SER SER A . n A 1 275 LEU 275 370 ? ? ? A . n A 1 276 GLY 276 371 ? ? ? A . n A 1 277 LYS 277 372 ? ? ? A . n A 1 278 GLY 278 373 ? ? ? A . n A 1 279 PRO 279 374 ? ? ? A . n A 1 280 GLY 280 375 ? ? ? A . n A 1 281 ALA 281 376 ? ? ? A . n A 1 282 GLU 282 377 ? ? ? A . n A 1 283 GLY 283 378 ? ? ? A . n A 1 284 GLY 284 379 ? ? ? A . n A 1 285 SER 285 380 ? ? ? A . n A 1 286 GLY 286 381 ? ? ? A . n A 1 287 SER 287 382 ? ? ? A . n A 1 288 PRO 288 383 ? ? ? A . n A 1 289 GLU 289 384 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PEG 1 401 1 PEG PEG A . C 3 PO4 1 402 1 PO4 PO4 A . D 4 HG 1 403 1 HG HG A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 680 ? 1 MORE -30 ? 1 'SSA (A^2)' 12990 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-06-22 2 'Structure model' 1 1 2016-06-29 3 'Structure model' 1 2 2016-07-20 4 'Structure model' 1 3 2019-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' reflns 2 4 'Structure model' reflns_shell # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_reflns.pdbx_CC_half' 2 4 'Structure model' '_reflns_shell.pdbx_CC_half' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0103 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 112 ? ? -61.27 -70.56 2 1 GLN A 187 ? ? -91.56 -60.99 3 1 VAL A 253 ? ? -90.24 -61.58 4 1 THR A 290 ? ? -107.12 44.33 5 1 LEU A 294 ? ? -163.10 111.83 6 1 ASN A 318 ? ? 36.12 49.32 7 1 VAL A 346 ? ? -125.22 -51.19 8 1 ASP A 354 ? ? -170.01 136.31 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 122 ? CD ? A LYS 27 CD 2 1 Y 1 A LYS 122 ? CE ? A LYS 27 CE 3 1 Y 1 A LYS 122 ? NZ ? A LYS 27 NZ 4 1 Y 1 A LYS 178 ? CG ? A LYS 83 CG 5 1 Y 1 A LYS 178 ? CD ? A LYS 83 CD 6 1 Y 1 A LYS 178 ? CE ? A LYS 83 CE 7 1 Y 1 A LYS 178 ? NZ ? A LYS 83 NZ 8 1 Y 1 A LYS 255 ? CG ? A LYS 160 CG 9 1 Y 1 A LYS 255 ? CD ? A LYS 160 CD 10 1 Y 1 A LYS 255 ? CE ? A LYS 160 CE 11 1 Y 1 A LYS 255 ? NZ ? A LYS 160 NZ 12 1 Y 1 A GLU 288 ? CG ? A GLU 193 CG 13 1 Y 1 A GLU 288 ? CD ? A GLU 193 CD 14 1 Y 1 A GLU 288 ? OE1 ? A GLU 193 OE1 15 1 Y 1 A GLU 288 ? OE2 ? A GLU 193 OE2 16 1 Y 1 A LYS 307 ? CG ? A LYS 212 CG 17 1 Y 1 A LYS 307 ? CD ? A LYS 212 CD 18 1 Y 1 A LYS 307 ? CE ? A LYS 212 CE 19 1 Y 1 A LYS 307 ? NZ ? A LYS 212 NZ 20 1 Y 1 A LYS 327 ? CG ? A LYS 232 CG 21 1 Y 1 A LYS 327 ? CD ? A LYS 232 CD 22 1 Y 1 A LYS 327 ? CE ? A LYS 232 CE 23 1 Y 1 A LYS 327 ? NZ ? A LYS 232 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 96 ? A GLY 1 2 1 Y 1 A PRO 97 ? A PRO 2 3 1 Y 1 A LEU 98 ? A LEU 3 4 1 Y 1 A GLY 99 ? A GLY 4 5 1 Y 1 A SER 100 ? A SER 5 6 1 Y 1 A PRO 101 ? A PRO 6 7 1 Y 1 A GLU 102 ? A GLU 7 8 1 Y 1 A PHE 103 ? A PHE 8 9 1 Y 1 A PRO 104 ? A PRO 9 10 1 Y 1 A GLY 105 ? A GLY 10 11 1 Y 1 A ARG 106 ? A ARG 11 12 1 Y 1 A LEU 107 ? A LEU 12 13 1 Y 1 A GLU 108 ? A GLU 13 14 1 Y 1 A MET 109 ? A MET 14 15 1 Y 1 A GLU 110 ? A GLU 15 16 1 Y 1 A LYS 182 ? A LYS 87 17 1 Y 1 A SER 183 ? A SER 88 18 1 Y 1 A GLU 184 ? A GLU 89 19 1 Y 1 A LEU 370 ? A LEU 275 20 1 Y 1 A GLY 371 ? A GLY 276 21 1 Y 1 A LYS 372 ? A LYS 277 22 1 Y 1 A GLY 373 ? A GLY 278 23 1 Y 1 A PRO 374 ? A PRO 279 24 1 Y 1 A GLY 375 ? A GLY 280 25 1 Y 1 A ALA 376 ? A ALA 281 26 1 Y 1 A GLU 377 ? A GLU 282 27 1 Y 1 A GLY 378 ? A GLY 283 28 1 Y 1 A GLY 379 ? A GLY 284 29 1 Y 1 A SER 380 ? A SER 285 30 1 Y 1 A GLY 381 ? A GLY 286 31 1 Y 1 A SER 382 ? A SER 287 32 1 Y 1 A PRO 383 ? A PRO 288 33 1 Y 1 A GLU 384 ? A GLU 289 # _pdbx_audit_support.funding_organization ? _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'DI(HYDROXYETHYL)ETHER' PEG 3 'PHOSPHATE ION' PO4 4 'MERCURY (II) ION' HG #