data_5JLX # _entry.id 5JLX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5JLX pdb_00005jlx 10.2210/pdb5jlx/pdb WWPDB D_1000220815 ? ? # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 5JLW _pdbx_database_related.db_name PDB _pdbx_database_related.details . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5JLX _pdbx_database_status.recvd_initial_deposition_date 2016-04-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'White, M.A.' 1 'Zandarashvili, L.' 2 'Iwahara, J.' 3 'Nguyen, D.' 4 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country GE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Chembiochem _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1439-7633 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 17 _citation.language ? _citation.page_first 1636 _citation.page_last 1642 _citation.title 'Stereospecific Effects of Oxygen-to-Sulfur Substitution in DNA Phosphate on Ion Pair Dynamics and Protein-DNA Affinity.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/cbic.201600265 _citation.pdbx_database_id_PubMed 27271797 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nguyen, D.' 1 ? primary 'Zandarashvili, L.' 2 ? primary 'White, M.A.' 3 ? primary 'Iwahara, J.' 4 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5JLX _cell.details ? _cell.formula_units_Z ? _cell.length_a 60.864 _cell.length_a_esd ? _cell.length_b 75.581 _cell.length_b_esd ? _cell.length_c 91.876 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JLX _symmetry.cell_setting ? _symmetry.Int_Tables_number 17 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Homeotic protein antennapedia' 7961.297 2 ? C335S ? ? 2 polymer syn ;DNA (5'-D(*AP*GP*AP*AP*AP*GP*CP*(C7S)P*AP*TP*TP*AP*GP*AP*G)-3') ; 4667.128 2 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*CP*TP*CP*TP*AP*AP*TP*GP*GP*CP*TP*TP*TP*C)-3') ; 4525.944 2 ? ? ? ? 4 non-polymer syn 'NICKEL (II) ION' 58.693 3 ? ? ? ? 5 water nat water 18.015 29 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no MRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKEN MRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKEN A,D ? 2 polydeoxyribonucleotide no yes '(DA)(DG)(DA)(DA)(DA)(DG)(DC)(C7S)(DA)(DT)(DT)(DA)(DG)(DA)(DG)' AGAAAGCXATTAGAG B,E ? 3 polydeoxyribonucleotide no no '(DT)(DC)(DT)(DC)(DT)(DA)(DA)(DT)(DG)(DG)(DC)(DT)(DT)(DT)(DC)' TCTCTAATGGCTTTC C,F ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 LYS n 1 4 ARG n 1 5 GLY n 1 6 ARG n 1 7 GLN n 1 8 THR n 1 9 TYR n 1 10 THR n 1 11 ARG n 1 12 TYR n 1 13 GLN n 1 14 THR n 1 15 LEU n 1 16 GLU n 1 17 LEU n 1 18 GLU n 1 19 LYS n 1 20 GLU n 1 21 PHE n 1 22 HIS n 1 23 PHE n 1 24 ASN n 1 25 ARG n 1 26 TYR n 1 27 LEU n 1 28 THR n 1 29 ARG n 1 30 ARG n 1 31 ARG n 1 32 ARG n 1 33 ILE n 1 34 GLU n 1 35 ILE n 1 36 ALA n 1 37 HIS n 1 38 ALA n 1 39 LEU n 1 40 SER n 1 41 LEU n 1 42 THR n 1 43 GLU n 1 44 ARG n 1 45 GLN n 1 46 ILE n 1 47 LYS n 1 48 ILE n 1 49 TRP n 1 50 PHE n 1 51 GLN n 1 52 ASN n 1 53 ARG n 1 54 ARG n 1 55 MET n 1 56 LYS n 1 57 TRP n 1 58 LYS n 1 59 LYS n 1 60 GLU n 1 61 ASN n 2 1 DA n 2 2 DG n 2 3 DA n 2 4 DA n 2 5 DA n 2 6 DG n 2 7 DC n 2 8 C7S n 2 9 DA n 2 10 DT n 2 11 DT n 2 12 DA n 2 13 DG n 2 14 DA n 2 15 DG n 3 1 DT n 3 2 DC n 3 3 DT n 3 4 DC n 3 5 DT n 3 6 DA n 3 7 DA n 3 8 DT n 3 9 DG n 3 10 DG n 3 11 DC n 3 12 DT n 3 13 DT n 3 14 DT n 3 15 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 61 _entity_src_gen.gene_src_common_name 'Fruit fly' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Antp, CG1028' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Drosophila melanogaster' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7227 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 15 unidentified ? 32644 ? 3 1 sample 1 15 unidentified ? 32644 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP ANTP_DROME P02833 ? 1 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297 2 PDB 5JLX 5JLX ? 2 ? 1 3 PDB 5JLX 5JLX ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5JLX A 2 ? 61 ? P02833 297 ? 356 ? 1 60 2 2 5JLX B 1 ? 15 ? 5JLX 0 ? 14 ? 0 14 3 3 5JLX C 1 ? 15 ? 5JLX 0 ? 14 ? 0 14 4 1 5JLX D 2 ? 61 ? P02833 297 ? 356 ? 1 60 5 2 5JLX E 1 ? 15 ? 5JLX 1 ? 15 ? 1 15 6 3 5JLX F 1 ? 15 ? 5JLX 1 ? 15 ? 1 15 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5JLX MET A 1 ? UNP P02833 ? ? 'expression tag' 0 1 1 5JLX SER A 40 ? UNP P02833 CYS 335 'engineered mutation' 39 2 4 5JLX MET D 1 ? UNP P02833 ? ? 'expression tag' 0 3 4 5JLX SER D 40 ? UNP P02833 CYS 335 'engineered mutation' 39 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 C7S 'DNA linking' n "2'-deoxy-5'-O-thiophosphonocytidine" ;2'-deoxy-5'-O-thiophosphonocytidine (thiophospho connection isoform 2) ; 'C9 H14 N3 O6 P S' 323.263 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5JLX _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.14 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 60.81 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20mM bis-Tris propane, 10mM NiCl2, 4-6% 2-methyl-2,4-pentanediol' _exptl_crystal_grow.pdbx_pH_range '6.0 - 7.5' # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX-225' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-03-31 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97872 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-F' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97872 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-F _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5JLX _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.748 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11412 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.4 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.4 _reflns.pdbx_Rmerge_I_obs 0.152 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.064 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 4.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.75 _reflns_shell.d_res_low 2.80 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99.1 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.302 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.2 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5JLX _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.748 _refine.ls_d_res_low 36.666 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 9098 _refine.ls_number_reflns_R_free 455 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 78.70 _refine.ls_percent_reflns_R_free 5.00 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1954 _refine.ls_R_factor_R_free 0.2464 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1926 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4XID _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 27.28 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.37 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1048 _refine_hist.pdbx_number_atoms_nucleic_acid 1218 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 29 _refine_hist.number_atoms_total 2298 _refine_hist.d_res_high 2.748 _refine_hist.d_res_low 36.666 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? 2434 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.786 ? 3526 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 26.539 ? 1236 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.042 ? 377 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 241 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.7480 3.1455 . . 103 1960 55.00 . . . 0.3788 . 0.2753 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1455 3.9622 . . 155 2950 82.00 . . . 0.2570 . 0.1959 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.9622 36.6696 . . 197 3733 99.00 . . . 0.2206 . 0.1785 . . . . . . . . . . # _struct.entry_id 5JLX _struct.title 'AntpHD with 15bp DNA duplex S-monothioated at Cytidine-8' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5JLX _struct_keywords.text ;HOMEODOMAIN, DNA-BINDING PROTEIN, COMPLEX (HOMEODOMAIN-DNA), TRANSCRIPTION-DNA COMPLEX, Transcription Regulator-DNA complex, monothiolated DNA ; _struct_keywords.pdbx_keywords 'Transcription Regulator/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 5 ? K N N 5 ? L N N 5 ? M N N 5 ? N N N 5 ? # _struct_biol.id 1 _struct_biol.details 'There are two protein:DNA complexes in the a.u.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 10 ? HIS A 22 ? THR A 9 HIS A 21 1 ? 13 HELX_P HELX_P2 AA2 THR A 28 ? LEU A 39 ? THR A 27 LEU A 38 1 ? 12 HELX_P HELX_P3 AA3 THR A 42 ? ASN A 61 ? THR A 41 ASN A 60 1 ? 20 HELX_P HELX_P4 AA4 THR D 10 ? ASN D 24 ? THR D 9 ASN D 23 1 ? 15 HELX_P HELX_P5 AA5 THR D 28 ? LEU D 39 ? THR D 27 LEU D 38 1 ? 12 HELX_P HELX_P6 AA6 THR D 42 ? ASN D 61 ? THR D 41 ASN D 60 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DC 7 "O3'" ? ? ? 1_555 B C7S 8 P ? ? B DC 6 B C7S 7 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale2 covale both ? B C7S 8 "O3'" ? ? ? 1_555 B DA 9 P ? ? B C7S 7 B DA 8 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale3 covale both ? E DC 7 "O3'" ? ? ? 1_555 E C7S 8 P ? ? E DC 7 E C7S 8 1_555 ? ? ? ? ? ? ? 1.597 ? ? covale4 covale both ? E C7S 8 "O3'" ? ? ? 1_555 E DA 9 P ? ? E C7S 8 E DA 9 1_555 ? ? ? ? ? ? ? 1.616 ? ? metalc1 metalc ? ? A HIS 22 NE2 ? ? ? 1_555 G NI . NI ? ? A HIS 21 A NI 101 1_555 ? ? ? ? ? ? ? 2.183 ? ? metalc2 metalc ? ? G NI . NI ? ? ? 1_555 J HOH . O ? ? A NI 101 A HOH 203 1_555 ? ? ? ? ? ? ? 1.910 ? ? metalc3 metalc ? ? G NI . NI ? ? ? 1_555 D HIS 22 NE2 ? ? A NI 101 D HIS 21 1_555 ? ? ? ? ? ? ? 2.188 ? ? metalc4 metalc ? ? G NI . NI ? ? ? 1_555 L HOH . O ? ? A NI 101 D HOH 103 1_555 ? ? ? ? ? ? ? 2.220 ? ? metalc5 metalc ? ? B DG 2 N7 ? ? ? 1_555 H NI . NI ? ? B DG 1 B NI 101 1_555 ? ? ? ? ? ? ? 2.597 ? ? metalc6 metalc ? ? E DG 2 N7 ? ? ? 1_555 I NI . NI ? ? E DG 2 E NI 101 1_555 ? ? ? ? ? ? ? 2.467 ? ? metalc7 metalc ? ? I NI . NI ? ? ? 1_555 M HOH . O ? ? E NI 101 E HOH 203 1_555 ? ? ? ? ? ? ? 1.944 ? ? hydrog1 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 15 N3 ? ? B DG 1 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 15 O2 ? ? B DG 1 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 15 N4 ? ? B DG 1 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DA 3 N1 ? ? ? 1_555 C DT 14 N3 ? ? B DA 2 C DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DA 3 N6 ? ? ? 1_555 C DT 14 O4 ? ? B DA 2 C DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 13 N3 ? ? B DA 3 C DT 12 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog7 hydrog ? ? B DA 5 N1 ? ? ? 1_555 C DT 12 N3 ? ? B DA 4 C DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DA 5 N6 ? ? ? 1_555 C DT 12 O4 ? ? B DA 4 C DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 6 N1 ? ? ? 1_555 C DC 11 N3 ? ? B DG 5 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 6 N2 ? ? ? 1_555 C DC 11 O2 ? ? B DG 5 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 6 O6 ? ? ? 1_555 C DC 11 N4 ? ? B DG 5 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 7 N3 ? ? ? 1_555 C DG 10 N1 ? ? B DC 6 C DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 7 N4 ? ? ? 1_555 C DG 10 O6 ? ? B DC 6 C DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 7 O2 ? ? ? 1_555 C DG 10 N2 ? ? B DC 6 C DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B C7S 8 N3 ? ? ? 1_555 C DG 9 N1 ? ? B C7S 7 C DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B C7S 8 N4 ? ? ? 1_555 C DG 9 O6 ? ? B C7S 7 C DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B C7S 8 O2 ? ? ? 1_555 C DG 9 N2 ? ? B C7S 7 C DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DA 9 N1 ? ? ? 1_555 C DT 8 N3 ? ? B DA 8 C DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DA 9 N6 ? ? ? 1_555 C DT 8 O4 ? ? B DA 8 C DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DT 10 N3 ? ? ? 1_555 C DA 7 N1 ? ? B DT 9 C DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DT 10 O4 ? ? ? 1_555 C DA 7 N6 ? ? B DT 9 C DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DT 11 N3 ? ? ? 1_555 C DA 6 N1 ? ? B DT 10 C DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DT 11 O4 ? ? ? 1_555 C DA 6 N6 ? ? B DT 10 C DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DA 12 N1 ? ? ? 1_555 C DT 5 N3 ? ? B DA 11 C DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DA 12 N6 ? ? ? 1_555 C DT 5 O4 ? ? B DA 11 C DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DG 13 N1 ? ? ? 1_555 C DC 4 N3 ? ? B DG 12 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DG 13 N2 ? ? ? 1_555 C DC 4 O2 ? ? B DG 12 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DG 13 O6 ? ? ? 1_555 C DC 4 N4 ? ? B DG 12 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DA 14 N1 ? ? ? 1_555 C DT 3 N3 ? ? B DA 13 C DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DA 14 N6 ? ? ? 1_555 C DT 3 O4 ? ? B DA 13 C DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DG 15 N1 ? ? ? 1_555 C DC 2 N3 ? ? B DG 14 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DG 15 N2 ? ? ? 1_555 C DC 2 O2 ? ? B DG 14 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DG 15 O6 ? ? ? 1_555 C DC 2 N4 ? ? B DG 14 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? E DG 2 N1 ? ? ? 1_555 F DC 15 N3 ? ? E DG 2 F DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? E DG 2 N2 ? ? ? 1_555 F DC 15 O2 ? ? E DG 2 F DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? E DG 2 O6 ? ? ? 1_555 F DC 15 N4 ? ? E DG 2 F DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? E DA 3 N1 ? ? ? 1_555 F DT 14 N3 ? ? E DA 3 F DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? E DA 3 N6 ? ? ? 1_555 F DT 14 O4 ? ? E DA 3 F DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? E DA 4 N1 ? ? ? 1_555 F DT 13 N3 ? ? E DA 4 F DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? E DA 4 N6 ? ? ? 1_555 F DT 13 O4 ? ? E DA 4 F DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? E DA 5 N1 ? ? ? 1_555 F DT 12 N3 ? ? E DA 5 F DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? E DA 5 N6 ? ? ? 1_555 F DT 12 O4 ? ? E DA 5 F DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E DG 6 N1 ? ? ? 1_555 F DC 11 N3 ? ? E DG 6 F DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? E DG 6 N2 ? ? ? 1_555 F DC 11 O2 ? ? E DG 6 F DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? E DG 6 O6 ? ? ? 1_555 F DC 11 N4 ? ? E DG 6 F DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? E DC 7 N3 ? ? ? 1_555 F DG 10 N1 ? ? E DC 7 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? E DC 7 N4 ? ? ? 1_555 F DG 10 O6 ? ? E DC 7 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? E DC 7 O2 ? ? ? 1_555 F DG 10 N2 ? ? E DC 7 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? E C7S 8 N3 ? ? ? 1_555 F DG 9 N1 ? ? E C7S 8 F DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? E C7S 8 N4 ? ? ? 1_555 F DG 9 O6 ? ? E C7S 8 F DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? E C7S 8 O2 ? ? ? 1_555 F DG 9 N2 ? ? E C7S 8 F DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? E DA 9 N1 ? ? ? 1_555 F DT 8 N3 ? ? E DA 9 F DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? E DA 9 N6 ? ? ? 1_555 F DT 8 O4 ? ? E DA 9 F DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? E DT 10 N3 ? ? ? 1_555 F DA 7 N1 ? ? E DT 10 F DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? E DT 10 O4 ? ? ? 1_555 F DA 7 N6 ? ? E DT 10 F DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? E DT 11 N3 ? ? ? 1_555 F DA 6 N1 ? ? E DT 11 F DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? E DT 11 O4 ? ? ? 1_555 F DA 6 N6 ? ? E DT 11 F DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? E DA 12 N1 ? ? ? 1_555 F DT 5 N3 ? ? E DA 12 F DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? E DA 12 N6 ? ? ? 1_555 F DT 5 O4 ? ? E DA 12 F DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? E DG 13 N1 ? ? ? 1_555 F DC 4 N3 ? ? E DG 13 F DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? E DG 13 N2 ? ? ? 1_555 F DC 4 O2 ? ? E DG 13 F DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? E DG 13 O6 ? ? ? 1_555 F DC 4 N4 ? ? E DG 13 F DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? E DA 14 N1 ? ? ? 1_555 F DT 3 N3 ? ? E DA 14 F DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? E DA 14 N6 ? ? ? 1_555 F DT 3 O4 ? ? E DA 14 F DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? E DG 15 N1 ? ? ? 1_555 F DC 2 N3 ? ? E DG 15 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? E DG 15 N2 ? ? ? 1_555 F DC 2 O2 ? ? E DG 15 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? E DG 15 O6 ? ? ? 1_555 F DC 2 N4 ? ? E DG 15 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NI 101 ? 6 'binding site for residue NI A 101' AC2 Software B NI 101 ? 1 'binding site for residue NI B 101' AC3 Software E NI 101 ? 2 'binding site for residue NI E 101' AC4 Software E DC 7 ? 9 'binding site for Di-nucleotide DC E 7 and C7S E 8' AC5 Software E C7S 8 ? 7 'binding site for Di-nucleotide C7S E 8 and DA E 9' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HIS A 22 ? HIS A 21 . ? 1_555 ? 2 AC1 6 HOH J . ? HOH A 203 . ? 1_555 ? 3 AC1 6 HIS D 22 ? HIS D 21 . ? 1_555 ? 4 AC1 6 LYS D 59 ? LYS D 58 . ? 3_555 ? 5 AC1 6 ASN D 61 ? ASN D 60 . ? 3_555 ? 6 AC1 6 HOH L . ? HOH D 103 . ? 1_555 ? 7 AC2 1 DG B 2 ? DG B 1 . ? 1_555 ? 8 AC3 2 DG E 2 ? DG E 2 . ? 1_555 ? 9 AC3 2 HOH M . ? HOH E 203 . ? 1_555 ? 10 AC4 9 TYR D 26 ? TYR D 25 . ? 1_555 ? 11 AC4 9 GLN D 51 ? GLN D 50 . ? 1_555 ? 12 AC4 9 ARG D 54 ? ARG D 53 . ? 1_555 ? 13 AC4 9 MET D 55 ? MET D 54 . ? 1_555 ? 14 AC4 9 LYS D 58 ? LYS D 57 . ? 1_555 ? 15 AC4 9 DG E 6 ? DG E 6 . ? 1_555 ? 16 AC4 9 DA E 9 ? DA E 9 . ? 1_555 ? 17 AC4 9 DG F 9 ? DG F 9 . ? 1_555 ? 18 AC4 9 DG F 10 ? DG F 10 . ? 1_555 ? 19 AC5 7 MET D 55 ? MET D 54 . ? 1_555 ? 20 AC5 7 LYS D 58 ? LYS D 57 . ? 1_555 ? 21 AC5 7 DC E 7 ? DC E 7 . ? 1_555 ? 22 AC5 7 DT E 10 ? DT E 10 . ? 1_555 ? 23 AC5 7 DA F 7 ? DA F 7 . ? 1_555 ? 24 AC5 7 DT F 8 ? DT F 8 . ? 1_555 ? 25 AC5 7 DG F 9 ? DG F 9 . ? 1_555 ? # _atom_sites.entry_id 5JLX _atom_sites.fract_transf_matrix[1][1] 0.016430 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013231 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010884 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NI O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 ? ? ? A . n A 1 2 ARG 2 1 ? ? ? A . n A 1 3 LYS 3 2 ? ? ? A . n A 1 4 ARG 4 3 ? ? ? A . n A 1 5 GLY 5 4 5 GLY GLY A . n A 1 6 ARG 6 5 6 ARG ARG A . n A 1 7 GLN 7 6 7 GLN GLN A . n A 1 8 THR 8 7 8 THR THR A . n A 1 9 TYR 9 8 9 TYR TYR A . n A 1 10 THR 10 9 10 THR THR A . n A 1 11 ARG 11 10 11 ARG ARG A . n A 1 12 TYR 12 11 12 TYR TYR A . n A 1 13 GLN 13 12 13 GLN GLN A . n A 1 14 THR 14 13 14 THR THR A . n A 1 15 LEU 15 14 15 LEU LEU A . n A 1 16 GLU 16 15 16 GLU GLU A . n A 1 17 LEU 17 16 17 LEU LEU A . n A 1 18 GLU 18 17 18 GLU GLU A . n A 1 19 LYS 19 18 19 LYS LYS A . n A 1 20 GLU 20 19 20 GLU GLU A . n A 1 21 PHE 21 20 21 PHE PHE A . n A 1 22 HIS 22 21 22 HIS HIS A . n A 1 23 PHE 23 22 23 PHE PHE A . n A 1 24 ASN 24 23 24 ASN ASN A . n A 1 25 ARG 25 24 25 ARG ARG A . n A 1 26 TYR 26 25 26 TYR TYR A . n A 1 27 LEU 27 26 27 LEU LEU A . n A 1 28 THR 28 27 28 THR THR A . n A 1 29 ARG 29 28 29 ARG ARG A . n A 1 30 ARG 30 29 30 ARG ARG A . n A 1 31 ARG 31 30 31 ARG ARG A . n A 1 32 ARG 32 31 32 ARG ARG A . n A 1 33 ILE 33 32 33 ILE ILE A . n A 1 34 GLU 34 33 34 GLU GLU A . n A 1 35 ILE 35 34 35 ILE ILE A . n A 1 36 ALA 36 35 36 ALA ALA A . n A 1 37 HIS 37 36 37 HIS HIS A . n A 1 38 ALA 38 37 38 ALA ALA A . n A 1 39 LEU 39 38 39 LEU LEU A . n A 1 40 SER 40 39 40 SER SER A . n A 1 41 LEU 41 40 41 LEU LEU A . n A 1 42 THR 42 41 42 THR THR A . n A 1 43 GLU 43 42 43 GLU GLU A . n A 1 44 ARG 44 43 44 ARG ARG A . n A 1 45 GLN 45 44 45 GLN GLN A . n A 1 46 ILE 46 45 46 ILE ILE A . n A 1 47 LYS 47 46 47 LYS LYS A . n A 1 48 ILE 48 47 48 ILE ILE A . n A 1 49 TRP 49 48 49 TRP TRP A . n A 1 50 PHE 50 49 50 PHE PHE A . n A 1 51 GLN 51 50 51 GLN GLN A . n A 1 52 ASN 52 51 52 ASN ASN A . n A 1 53 ARG 53 52 53 ARG ARG A . n A 1 54 ARG 54 53 54 ARG ARG A . n A 1 55 MET 55 54 55 MET MET A . n A 1 56 LYS 56 55 56 LYS LYS A . n A 1 57 TRP 57 56 57 TRP TRP A . n A 1 58 LYS 58 57 58 LYS LYS A . n A 1 59 LYS 59 58 59 LYS LYS A . n A 1 60 GLU 60 59 60 GLU GLU A . n A 1 61 ASN 61 60 61 ASN ASN A . n B 2 1 DA 1 0 1 DA DA B . n B 2 2 DG 2 1 2 DG DG B . n B 2 3 DA 3 2 3 DA DA B . n B 2 4 DA 4 3 4 DA DA B . n B 2 5 DA 5 4 5 DA DA B . n B 2 6 DG 6 5 6 DG DG B . n B 2 7 DC 7 6 7 DC DC B . n B 2 8 C7S 8 7 8 C7S C7S B . n B 2 9 DA 9 8 9 DA DA B . n B 2 10 DT 10 9 10 DT DT B . n B 2 11 DT 11 10 11 DT DT B . n B 2 12 DA 12 11 12 DA DA B . n B 2 13 DG 13 12 13 DG DG B . n B 2 14 DA 14 13 14 DA DA B . n B 2 15 DG 15 14 15 DG DG B . n C 3 1 DT 1 0 1 DT DT C . n C 3 2 DC 2 1 2 DC DC C . n C 3 3 DT 3 2 3 DT DT C . n C 3 4 DC 4 3 4 DC DC C . n C 3 5 DT 5 4 5 DT DT C . n C 3 6 DA 6 5 6 DA DA C . n C 3 7 DA 7 6 7 DA DA C . n C 3 8 DT 8 7 8 DT DT C . n C 3 9 DG 9 8 9 DG DG C . n C 3 10 DG 10 9 10 DG DG C . n C 3 11 DC 11 10 11 DC DC C . n C 3 12 DT 12 11 12 DT DT C . n C 3 13 DT 13 12 13 DT DT C . n C 3 14 DT 14 13 14 DT DT C . n C 3 15 DC 15 14 15 DC DC C . n D 1 1 MET 1 0 ? ? ? D . n D 1 2 ARG 2 1 ? ? ? D . n D 1 3 LYS 3 2 ? ? ? D . n D 1 4 ARG 4 3 4 ARG ARG D . n D 1 5 GLY 5 4 5 GLY GLY D . n D 1 6 ARG 6 5 6 ARG ARG D . n D 1 7 GLN 7 6 7 GLN GLN D . n D 1 8 THR 8 7 8 THR THR D . n D 1 9 TYR 9 8 9 TYR TYR D . n D 1 10 THR 10 9 10 THR THR D . n D 1 11 ARG 11 10 11 ARG ARG D . n D 1 12 TYR 12 11 12 TYR TYR D . n D 1 13 GLN 13 12 13 GLN GLN D . n D 1 14 THR 14 13 14 THR THR D . n D 1 15 LEU 15 14 15 LEU LEU D . n D 1 16 GLU 16 15 16 GLU GLU D . n D 1 17 LEU 17 16 17 LEU LEU D . n D 1 18 GLU 18 17 18 GLU GLU D . n D 1 19 LYS 19 18 19 LYS LYS D . n D 1 20 GLU 20 19 20 GLU GLU D . n D 1 21 PHE 21 20 21 PHE PHE D . n D 1 22 HIS 22 21 22 HIS HIS D . n D 1 23 PHE 23 22 23 PHE PHE D . n D 1 24 ASN 24 23 24 ASN ASN D . n D 1 25 ARG 25 24 25 ARG ARG D . n D 1 26 TYR 26 25 26 TYR TYR D . n D 1 27 LEU 27 26 27 LEU LEU D . n D 1 28 THR 28 27 28 THR THR D . n D 1 29 ARG 29 28 29 ARG ARG D . n D 1 30 ARG 30 29 30 ARG ARG D . n D 1 31 ARG 31 30 31 ARG ARG D . n D 1 32 ARG 32 31 32 ARG ARG D . n D 1 33 ILE 33 32 33 ILE ILE D . n D 1 34 GLU 34 33 34 GLU GLU D . n D 1 35 ILE 35 34 35 ILE ILE D . n D 1 36 ALA 36 35 36 ALA ALA D . n D 1 37 HIS 37 36 37 HIS HIS D . n D 1 38 ALA 38 37 38 ALA ALA D . n D 1 39 LEU 39 38 39 LEU LEU D . n D 1 40 SER 40 39 40 SER SER D . n D 1 41 LEU 41 40 41 LEU LEU D . n D 1 42 THR 42 41 42 THR THR D . n D 1 43 GLU 43 42 43 GLU GLU D . n D 1 44 ARG 44 43 44 ARG ARG D . n D 1 45 GLN 45 44 45 GLN GLN D . n D 1 46 ILE 46 45 46 ILE ILE D . n D 1 47 LYS 47 46 47 LYS LYS D . n D 1 48 ILE 48 47 48 ILE ILE D . n D 1 49 TRP 49 48 49 TRP TRP D . n D 1 50 PHE 50 49 50 PHE PHE D . n D 1 51 GLN 51 50 51 GLN GLN D . n D 1 52 ASN 52 51 52 ASN ASN D . n D 1 53 ARG 53 52 53 ARG ARG D . n D 1 54 ARG 54 53 54 ARG ARG D . n D 1 55 MET 55 54 55 MET MET D . n D 1 56 LYS 56 55 56 LYS LYS D . n D 1 57 TRP 57 56 57 TRP TRP D . n D 1 58 LYS 58 57 58 LYS LYS D . n D 1 59 LYS 59 58 59 LYS LYS D . n D 1 60 GLU 60 59 60 GLU GLU D . n D 1 61 ASN 61 60 61 ASN ASN D . n E 2 1 DA 1 1 1 DA DA E . n E 2 2 DG 2 2 2 DG DG E . n E 2 3 DA 3 3 3 DA DA E . n E 2 4 DA 4 4 4 DA DA E . n E 2 5 DA 5 5 5 DA DA E . n E 2 6 DG 6 6 6 DG DG E . n E 2 7 DC 7 7 7 DC DC E . n E 2 8 C7S 8 8 8 C7S C7S E . n E 2 9 DA 9 9 9 DA DA E . n E 2 10 DT 10 10 10 DT DT E . n E 2 11 DT 11 11 11 DT DT E . n E 2 12 DA 12 12 12 DA DA E . n E 2 13 DG 13 13 13 DG DG E . n E 2 14 DA 14 14 14 DA DA E . n E 2 15 DG 15 15 15 DG DG E . n F 3 1 DT 1 1 1 DT DT F . n F 3 2 DC 2 2 2 DC DC F . n F 3 3 DT 3 3 3 DT DT F . n F 3 4 DC 4 4 4 DC DC F . n F 3 5 DT 5 5 5 DT DT F . n F 3 6 DA 6 6 6 DA DA F . n F 3 7 DA 7 7 7 DA DA F . n F 3 8 DT 8 8 8 DT DT F . n F 3 9 DG 9 9 9 DG DG F . n F 3 10 DG 10 10 10 DG DG F . n F 3 11 DC 11 11 11 DC DC F . n F 3 12 DT 12 12 12 DT DT F . n F 3 13 DT 13 13 13 DT DT F . n F 3 14 DT 14 14 14 DT DT F . n F 3 15 DC 15 15 15 DC DC F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 NI 1 101 1 NI NI A . H 4 NI 1 101 3 NI NI B . I 4 NI 1 101 2 NI NI E . J 5 HOH 1 201 3 HOH HOH A . J 5 HOH 2 202 15 HOH HOH A . J 5 HOH 3 203 25 HOH HOH A . J 5 HOH 4 204 2 HOH HOH A . J 5 HOH 5 205 20 HOH HOH A . J 5 HOH 6 206 27 HOH HOH A . J 5 HOH 7 207 28 HOH HOH A . K 5 HOH 1 101 8 HOH HOH C . K 5 HOH 2 102 9 HOH HOH C . K 5 HOH 3 103 16 HOH HOH C . K 5 HOH 4 104 22 HOH HOH C . K 5 HOH 5 105 14 HOH HOH C . K 5 HOH 6 106 24 HOH HOH C . K 5 HOH 7 107 23 HOH HOH C . L 5 HOH 1 101 13 HOH HOH D . L 5 HOH 2 102 17 HOH HOH D . L 5 HOH 3 103 29 HOH HOH D . L 5 HOH 4 104 21 HOH HOH D . L 5 HOH 5 105 6 HOH HOH D . L 5 HOH 6 106 19 HOH HOH D . M 5 HOH 1 201 1 HOH HOH E . M 5 HOH 2 202 5 HOH HOH E . M 5 HOH 3 203 10 HOH HOH E . M 5 HOH 4 204 11 HOH HOH E . M 5 HOH 5 205 7 HOH HOH E . M 5 HOH 6 206 26 HOH HOH E . N 5 HOH 1 101 4 HOH HOH F . N 5 HOH 2 102 12 HOH HOH F . N 5 HOH 3 103 18 HOH HOH F . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,G,H,J,K 2 1 D,E,F,I,L,M,N # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3280 ? 1 MORE -23 ? 1 'SSA (A^2)' 8670 ? 2 'ABSA (A^2)' 3280 ? 2 MORE -26 ? 2 'SSA (A^2)' 8780 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id D _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 106 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id L _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 22 ? A HIS 21 ? 1_555 NI ? G NI . ? A NI 101 ? 1_555 O ? J HOH . ? A HOH 203 ? 1_555 78.2 ? 2 NE2 ? A HIS 22 ? A HIS 21 ? 1_555 NI ? G NI . ? A NI 101 ? 1_555 NE2 ? D HIS 22 ? D HIS 21 ? 1_555 88.0 ? 3 O ? J HOH . ? A HOH 203 ? 1_555 NI ? G NI . ? A NI 101 ? 1_555 NE2 ? D HIS 22 ? D HIS 21 ? 1_555 82.1 ? 4 NE2 ? A HIS 22 ? A HIS 21 ? 1_555 NI ? G NI . ? A NI 101 ? 1_555 O ? L HOH . ? D HOH 103 ? 1_555 76.8 ? 5 O ? J HOH . ? A HOH 203 ? 1_555 NI ? G NI . ? A NI 101 ? 1_555 O ? L HOH . ? D HOH 103 ? 1_555 141.5 ? 6 NE2 ? D HIS 22 ? D HIS 21 ? 1_555 NI ? G NI . ? A NI 101 ? 1_555 O ? L HOH . ? D HOH 103 ? 1_555 68.2 ? 7 N7 ? E DG 2 ? E DG 2 ? 1_555 NI ? I NI . ? E NI 101 ? 1_555 O ? M HOH . ? E HOH 203 ? 1_555 82.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-06-22 2 'Structure model' 1 1 2016-07-13 3 'Structure model' 1 2 2016-09-14 4 'Structure model' 1 3 2017-09-20 5 'Structure model' 1 4 2019-12-25 6 'Structure model' 1 5 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Author supporting evidence' 6 5 'Structure model' 'Database references' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Derived calculations' 10 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_audit_support 2 4 'Structure model' pdbx_struct_oper_list 3 5 'Structure model' pdbx_audit_support 4 5 'Structure model' struct_ref_seq 5 6 'Structure model' chem_comp_atom 6 6 'Structure model' chem_comp_bond 7 6 'Structure model' database_2 8 6 'Structure model' pdbx_initial_refinement_model 9 6 'Structure model' pdbx_struct_conn_angle 10 6 'Structure model' struct_conn 11 6 'Structure model' struct_conn_type # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_audit_support.funding_organization' 2 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 3 5 'Structure model' '_pdbx_audit_support.funding_organization' 4 5 'Structure model' '_struct_ref_seq.db_align_beg' 5 5 'Structure model' '_struct_ref_seq.db_align_end' 6 6 'Structure model' '_database_2.pdbx_DOI' 7 6 'Structure model' '_database_2.pdbx_database_accession' 8 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 9 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 10 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 11 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 12 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 13 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 14 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 15 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 16 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 17 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 19 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 20 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 21 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 22 6 'Structure model' '_pdbx_struct_conn_angle.value' 23 6 'Structure model' '_struct_conn.conn_type_id' 24 6 'Structure model' '_struct_conn.id' 25 6 'Structure model' '_struct_conn.pdbx_dist_value' 26 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 27 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 28 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 29 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 30 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 31 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 32 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 33 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 34 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 35 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 36 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 37 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 38 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 39 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 40 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 41 6 'Structure model' '_struct_conn_type.id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 24.4948 14.2377 1.7546 0.3417 0.4890 0.3239 0.1361 0.0326 -0.1487 0.0793 0.2455 0.1054 0.1070 0.0156 -0.0679 -0.2524 -0.2647 -0.1306 -0.0528 -0.0616 -0.4342 0.2151 -0.0169 -0.0771 'X-RAY DIFFRACTION' 2 ? refined 17.1839 14.4656 7.5946 0.4905 0.4266 0.3101 0.2273 -0.0478 -0.0400 0.0348 0.0424 0.0022 0.0373 -0.0010 -0.0100 -0.0126 -0.0217 -0.1376 0.0026 0.1135 -0.0230 -0.0075 -0.1128 0.0133 'X-RAY DIFFRACTION' 3 ? refined 9.4784 14.8043 8.1004 -0.2295 0.0489 -0.7503 0.5156 -0.7353 0.5270 0.1171 0.0097 0.3549 0.0212 0.0717 0.0802 -0.0739 -0.0416 0.0048 -0.1105 0.0433 0.2185 0.2001 0.0820 -0.1499 'X-RAY DIFFRACTION' 4 ? refined 5.7041 20.9937 2.4133 0.7620 0.6677 0.7980 0.2024 -0.2907 -0.1549 0.0242 0.0160 0.0123 -0.0147 -0.0102 0.0059 -0.0580 0.0844 0.1002 0.2989 -0.0775 -0.0450 0.3282 -0.1658 -0.0001 'X-RAY DIFFRACTION' 5 ? refined 12.3490 29.4020 4.3797 0.3459 0.6623 0.4425 0.0777 -0.0548 -0.1112 0.0483 0.0111 0.0583 0.0249 -0.0503 -0.0323 -0.5358 -0.1331 -0.0480 -0.4036 -0.4028 0.2530 -0.2264 -0.1055 -0.0025 'X-RAY DIFFRACTION' 6 ? refined 18.6958 26.1925 7.6725 0.4317 0.5201 0.5025 -0.0000 0.0133 -0.0594 0.0309 0.0200 0.0140 0.0086 0.0202 -0.0069 0.1273 -0.2344 -0.0206 0.0245 0.0550 -0.0291 -0.0167 0.0728 -0.0012 'X-RAY DIFFRACTION' 7 ? refined 20.5436 24.4027 0.0930 0.5198 0.4830 0.2870 0.1016 -0.0806 0.1069 0.1071 0.1297 0.0055 0.1141 -0.0177 -0.0145 -0.2195 0.1762 -0.1198 -0.1736 -0.0637 -0.1885 -0.2668 -0.0204 -0.0403 'X-RAY DIFFRACTION' 8 ? refined 14.4053 19.0640 -2.9278 0.2296 0.3854 0.4164 0.0268 -0.0410 0.0205 0.0071 -0.0006 0.0112 0.0038 -0.0216 0.0004 -0.1916 0.3962 0.1119 -0.3588 -0.2461 0.1467 0.2752 -0.1343 0.0004 'X-RAY DIFFRACTION' 9 ? refined 8.9371 12.4765 -3.3529 0.5179 0.5536 0.7258 -0.0083 -0.2878 -0.2131 0.1143 0.0095 0.0051 -0.0102 -0.0313 -0.0038 -0.0259 0.0753 0.0947 -0.1101 0.0650 0.1420 0.1629 -0.2139 0.1515 'X-RAY DIFFRACTION' 10 ? refined 3.7842 7.6896 -3.0351 1.3610 0.6906 1.0038 -0.1807 -0.0134 -0.0836 0.0102 0.0066 0.0074 -0.0027 0.0078 0.0028 -0.2307 0.0159 0.0089 0.0812 0.0342 0.0891 0.0909 -0.0247 0.0005 'X-RAY DIFFRACTION' 11 ? refined 6.4683 34.6891 -11.4677 0.8299 0.6010 0.7696 0.2800 -0.1045 0.2331 0.0049 0.3152 0.3079 0.0235 0.0048 -0.3184 0.0754 0.1373 0.1834 0.0166 -0.2479 -0.1137 -0.1044 0.2144 -0.1170 'X-RAY DIFFRACTION' 12 ? refined 10.2022 15.5232 -13.7931 0.8249 0.7146 0.6598 0.2632 -0.2900 -0.1203 0.5672 0.8210 0.5332 0.3722 -0.5381 -0.1274 0.7934 0.5063 -0.7285 0.0129 -0.3128 0.2813 0.1217 -0.1896 0.0791 'X-RAY DIFFRACTION' 13 ? refined 27.2394 8.6331 -10.0784 0.7025 0.7169 0.5803 0.1824 -0.1107 0.0296 0.0089 0.0214 0.0054 0.0003 0.0093 -0.0033 0.1316 0.6109 -0.4756 -0.1140 -0.0589 0.2009 -0.1483 0.1414 0.0005 'X-RAY DIFFRACTION' 14 ? refined 21.5851 5.7992 -8.6998 0.7536 0.4579 0.5086 0.1452 -0.1826 -0.1095 0.6457 0.6195 0.2325 -0.2842 -0.4040 0.2962 0.1071 0.5710 -0.4445 0.5922 -0.3941 -0.3873 -0.1511 -0.7960 -0.0406 'X-RAY DIFFRACTION' 15 ? refined 13.7452 21.4198 -17.6801 1.0585 1.0964 0.7949 0.5720 -0.1820 0.1036 0.0075 0.1725 0.0646 -0.0277 0.0123 -0.1097 -0.0203 0.6703 0.2777 0.1362 -0.1357 0.0089 -0.4098 0.0712 0.0053 'X-RAY DIFFRACTION' 16 ? refined 0.7971 27.7351 -11.6482 1.1111 0.5441 0.7126 0.1329 -0.0855 -0.1132 0.0316 0.0342 0.0136 0.0377 -0.0108 -0.0140 0.3358 0.0484 0.0725 -0.2966 0.0018 0.1416 0.0484 -0.1770 0.0003 'X-RAY DIFFRACTION' 17 ? refined 15.7136 30.8205 29.2569 0.6148 0.4527 0.5847 -0.0088 -0.1734 0.0163 0.0035 0.0008 -0.0001 0.0086 -0.0006 -0.0037 -0.3702 0.2315 0.2096 0.4746 -0.2711 -0.0447 -0.2847 -0.0549 0.0006 'X-RAY DIFFRACTION' 18 ? refined 12.7097 26.8931 17.4892 0.3601 0.4782 0.5761 0.0876 -0.0035 0.0294 0.0119 0.0193 0.0134 0.0157 0.0108 -0.0045 -0.4224 0.2121 0.0741 -0.1830 -0.1974 0.1037 -0.3062 0.1314 0.0007 'X-RAY DIFFRACTION' 19 ? refined 11.9175 17.9452 18.5551 -0.0767 0.1597 0.1342 0.1320 -0.4472 -0.0693 0.3147 0.0227 0.2155 -0.0366 -0.0007 -0.0547 0.0389 -0.1657 -0.2230 -0.1106 0.2480 0.0175 0.0641 -0.2173 0.1943 'X-RAY DIFFRACTION' 20 ? refined 10.0785 11.0571 19.0480 0.2952 0.2715 0.5779 -0.1056 0.1867 -0.0740 0.0385 0.0884 0.1036 -0.0470 0.0627 -0.0740 -0.0210 -0.1329 0.0263 -0.1601 0.0299 0.2980 0.0613 -0.2783 -0.0321 'X-RAY DIFFRACTION' 21 ? refined 20.1889 10.2654 24.5741 0.4287 0.1611 0.5419 0.2549 0.2180 0.0854 0.1257 0.0170 0.1676 -0.0293 0.0510 -0.0019 0.1433 -0.1942 0.0422 -0.2164 -0.0323 0.2045 0.0143 0.1864 0.0306 'X-RAY DIFFRACTION' 22 ? refined 24.1009 14.0720 19.6314 0.1989 0.4077 0.3386 0.0127 0.1255 -0.0904 0.0074 0.1612 0.0152 -0.0009 0.0057 0.0185 0.0544 0.2895 -0.0888 -0.2488 0.0845 0.1843 -0.0202 0.1086 0.0935 'X-RAY DIFFRACTION' 23 ? refined 23.0013 21.8652 19.0714 0.2760 0.3708 0.5096 0.0939 0.0008 0.0895 0.0027 0.0180 0.0093 -0.0013 -0.0002 0.0023 0.0666 0.0140 -0.1396 -0.0208 0.2774 -0.4499 -0.1957 -0.0577 -0.0015 'X-RAY DIFFRACTION' 24 ? refined 23.8536 22.7172 24.7137 0.5737 0.5749 0.2314 -0.1450 0.0230 0.0892 0.0209 0.0368 0.0185 -0.0288 0.0168 -0.0182 0.0978 -0.0768 -0.1588 -0.0373 -0.1125 -0.0067 -0.1417 -0.0651 0.0041 'X-RAY DIFFRACTION' 25 ? refined 15.6669 18.6418 28.8672 0.2927 0.3310 0.2660 0.0865 0.0314 0.0404 0.1683 0.0280 0.0339 -0.0768 -0.0297 0.0149 -0.3281 -0.4105 -0.2236 -0.1294 -0.1476 0.2286 0.0922 -0.0366 -0.1739 'X-RAY DIFFRACTION' 26 ? refined 6.6946 13.8898 29.2731 0.3472 0.6646 0.5902 0.0292 0.1105 0.1573 0.0157 0.0075 0.0107 0.0037 0.0139 0.0100 -0.1588 0.0475 -0.2136 0.2614 0.1340 -0.1430 -0.0509 -0.0370 -0.0000 'X-RAY DIFFRACTION' 27 ? refined 0.7246 13.0738 29.8959 0.6043 0.9450 0.5597 -0.1899 0.0735 -0.0782 0.0143 0.0032 0.0069 0.0084 0.0061 -0.0002 -0.0418 0.0424 -0.0325 -0.1541 -0.0503 0.0669 0.0768 -0.0117 0.0001 'X-RAY DIFFRACTION' 28 ? refined 24.5399 7.7776 36.8248 0.3137 0.5031 0.5145 0.0186 -0.0177 0.0797 -0.0032 -0.0111 0.0876 -0.0059 0.0375 -0.0288 -0.2232 0.6175 0.2760 0.4126 0.2246 0.2470 -0.3645 -0.2014 -0.0002 'X-RAY DIFFRACTION' 29 ? refined 9.1333 18.8519 42.0381 0.6514 0.6029 0.7095 0.1944 0.3776 0.1888 0.2670 0.3611 0.2437 -0.1398 0.2487 -0.2087 -0.1328 0.3715 0.1155 0.4620 -0.2300 0.2862 0.1625 -0.2325 -0.5082 'X-RAY DIFFRACTION' 30 ? refined 8.9124 33.9177 35.7797 0.6857 0.8501 0.7820 0.2468 -0.2537 0.0251 0.0314 0.0124 0.0256 0.0220 0.0465 0.0213 0.0304 0.2195 0.2136 0.4654 0.0058 0.1735 -0.4142 0.4941 0.0001 'X-RAY DIFFRACTION' 31 ? refined -1.2004 30.9169 35.8541 0.5934 0.5613 1.0158 0.1234 0.0783 -0.2127 0.0039 0.0121 0.0123 -0.0079 -0.0097 0.0121 -0.5227 0.1825 0.0365 0.3384 -0.3967 -0.0314 0.0303 -0.2169 0.0021 'X-RAY DIFFRACTION' 32 ? refined 13.3539 24.8608 34.2385 0.4510 0.6002 0.6253 0.1889 -0.0124 -0.1446 0.1177 0.1528 0.1068 0.0906 -0.0166 -0.0912 -0.0422 -0.0361 0.2468 0.6040 -0.2588 0.1596 -0.1513 0.0768 -0.0019 'X-RAY DIFFRACTION' 33 ? refined 19.4277 8.6440 41.0414 0.9787 0.6901 0.7408 0.1810 -0.1712 0.0503 1.1370 0.9820 0.7148 -0.4762 -0.7904 0.6078 -0.5542 0.2338 -0.3188 0.5403 0.0877 -0.4156 -0.5182 -0.3548 -0.0582 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '(chain A and resid 1:13)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '(chain A and resid 14:17)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '(chain A and resid 18:23)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? '(chain A and resid 24:28)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? '(chain A and resid 29:33)' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? '(chain A and resid 34:38)' 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? '(chain A and resid 39:44)' 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? '(chain A and resid 45:52)' 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? '(chain A and resid 53:56)' 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? '(chain A and resid 57:61)' 'X-RAY DIFFRACTION' 11 11 ? ? ? ? ? ? ? ? ? '(chain B and resid 1:5)' 'X-RAY DIFFRACTION' 12 12 ? ? ? ? ? ? ? ? ? '(chain B and resid 6:11)' 'X-RAY DIFFRACTION' 13 13 ? ? ? ? ? ? ? ? ? '(chain B and resid 12:15)' 'X-RAY DIFFRACTION' 14 14 ? ? ? ? ? ? ? ? ? '(chain C and resid 1:7)' 'X-RAY DIFFRACTION' 15 15 ? ? ? ? ? ? ? ? ? '(chain C and resid 8:11)' 'X-RAY DIFFRACTION' 16 16 ? ? ? ? ? ? ? ? ? '(chain C and resid 12:15)' 'X-RAY DIFFRACTION' 17 17 ? ? ? ? ? ? ? ? ? '(chain D and resid 1:10)' 'X-RAY DIFFRACTION' 18 18 ? ? ? ? ? ? ? ? ? '(chain D and resid 11:15)' 'X-RAY DIFFRACTION' 19 19 ? ? ? ? ? ? ? ? ? '(chain D and resid 16:21)' 'X-RAY DIFFRACTION' 20 20 ? ? ? ? ? ? ? ? ? '(chain D and resid 22:25)' 'X-RAY DIFFRACTION' 21 21 ? ? ? ? ? ? ? ? ? '(chain D and resid 26:29)' 'X-RAY DIFFRACTION' 22 22 ? ? ? ? ? ? ? ? ? '(chain D and resid 30:34)' 'X-RAY DIFFRACTION' 23 23 ? ? ? ? ? ? ? ? ? '(chain D and resid 35:39)' 'X-RAY DIFFRACTION' 24 24 ? ? ? ? ? ? ? ? ? '(chain D and resid 40:43)' 'X-RAY DIFFRACTION' 25 25 ? ? ? ? ? ? ? ? ? '(chain D and resid 44:53)' 'X-RAY DIFFRACTION' 26 26 ? ? ? ? ? ? ? ? ? '(chain D and resid 54:57)' 'X-RAY DIFFRACTION' 27 27 ? ? ? ? ? ? ? ? ? '(chain D and resid 58:61)' 'X-RAY DIFFRACTION' 28 28 ? ? ? ? ? ? ? ? ? '(chain E and resid 1:7)' 'X-RAY DIFFRACTION' 29 29 ? ? ? ? ? ? ? ? ? '(chain E and resid 8:11)' 'X-RAY DIFFRACTION' 30 30 ? ? ? ? ? ? ? ? ? '(chain E and resid 12:15)' 'X-RAY DIFFRACTION' 31 31 ? ? ? ? ? ? ? ? ? '(chain F and resid 1:4)' 'X-RAY DIFFRACTION' 32 32 ? ? ? ? ? ? ? ? ? '(chain F and resid 5:8)' 'X-RAY DIFFRACTION' 33 33 ? ? ? ? ? ? ? ? ? '(chain F and resid 9:15)' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.10_2155 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OP2 E DA 5 ? ? O E HOH 201 ? ? 1.85 2 1 O C HOH 106 ? ? O C HOH 107 ? ? 2.07 3 1 O C HOH 104 ? ? O C HOH 107 ? ? 2.19 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.383 _pdbx_validate_rmsd_bond.bond_target_value 1.419 _pdbx_validate_rmsd_bond.bond_deviation -0.036 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DG 1 ? ? "C1'" B DG 1 ? ? N9 B DG 1 ? ? 110.69 108.30 2.39 0.30 N 2 1 "O4'" B DA 2 ? ? "C1'" B DA 2 ? ? N9 B DA 2 ? ? 110.50 108.30 2.20 0.30 N 3 1 "O4'" F DT 5 ? ? "C1'" F DT 5 ? ? N1 F DT 5 ? ? 110.12 108.30 1.82 0.30 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 58 ? NZ ? A LYS 59 NZ 2 1 Y 1 D ARG 3 ? NE ? D ARG 4 NE 3 1 Y 1 D ARG 3 ? CZ ? D ARG 4 CZ 4 1 Y 1 D ARG 3 ? NH1 ? D ARG 4 NH1 5 1 Y 1 D ARG 3 ? NH2 ? D ARG 4 NH2 6 1 Y 1 D LYS 58 ? CE ? D LYS 59 CE 7 1 Y 1 D LYS 58 ? NZ ? D LYS 59 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 0 ? A MET 1 2 1 Y 1 A ARG 1 ? A ARG 2 3 1 Y 1 A LYS 2 ? A LYS 3 4 1 Y 1 A ARG 3 ? A ARG 4 5 1 Y 1 D MET 0 ? D MET 1 6 1 Y 1 D ARG 1 ? D ARG 2 7 1 Y 1 D LYS 2 ? D LYS 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 C7S P P N N 58 C7S "C5'" C N N 59 C7S "O5'" O N N 60 C7S "C4'" C N R 61 C7S "O4'" O N N 62 C7S "C3'" C N S 63 C7S "O3'" O N N 64 C7S "C2'" C N N 65 C7S "C1'" C N R 66 C7S N1 N N N 67 C7S C2 C N N 68 C7S O2 O N N 69 C7S N3 N N N 70 C7S C4 C N N 71 C7S N4 N N N 72 C7S C5 C N N 73 C7S C6 C N N 74 C7S SP1 S N N 75 C7S OP2 O N N 76 C7S OP3 O N N 77 C7S H1 H N N 78 C7S H2 H N N 79 C7S H3 H N N 80 C7S H4 H N N 81 C7S H5 H N N 82 C7S H6 H N N 83 C7S H7 H N N 84 C7S H8 H N N 85 C7S H9 H N N 86 C7S H10 H N N 87 C7S H11 H N N 88 C7S H12 H N N 89 C7S HSP1 H N N 90 C7S HOP3 H N N 91 CYS N N N N 92 CYS CA C N R 93 CYS C C N N 94 CYS O O N N 95 CYS CB C N N 96 CYS SG S N N 97 CYS OXT O N N 98 CYS H H N N 99 CYS H2 H N N 100 CYS HA H N N 101 CYS HB2 H N N 102 CYS HB3 H N N 103 CYS HG H N N 104 CYS HXT H N N 105 DA OP3 O N N 106 DA P P N N 107 DA OP1 O N N 108 DA OP2 O N N 109 DA "O5'" O N N 110 DA "C5'" C N N 111 DA "C4'" C N R 112 DA "O4'" O N N 113 DA "C3'" C N S 114 DA "O3'" O N N 115 DA "C2'" C N N 116 DA "C1'" C N R 117 DA N9 N Y N 118 DA C8 C Y N 119 DA N7 N Y N 120 DA C5 C Y N 121 DA C6 C Y N 122 DA N6 N N N 123 DA N1 N Y N 124 DA C2 C Y N 125 DA N3 N Y N 126 DA C4 C Y N 127 DA HOP3 H N N 128 DA HOP2 H N N 129 DA "H5'" H N N 130 DA "H5''" H N N 131 DA "H4'" H N N 132 DA "H3'" H N N 133 DA "HO3'" H N N 134 DA "H2'" H N N 135 DA "H2''" H N N 136 DA "H1'" H N N 137 DA H8 H N N 138 DA H61 H N N 139 DA H62 H N N 140 DA H2 H N N 141 DC OP3 O N N 142 DC P P N N 143 DC OP1 O N N 144 DC OP2 O N N 145 DC "O5'" O N N 146 DC "C5'" C N N 147 DC "C4'" C N R 148 DC "O4'" O N N 149 DC "C3'" C N S 150 DC "O3'" O N N 151 DC "C2'" C N N 152 DC "C1'" C N R 153 DC N1 N N N 154 DC C2 C N N 155 DC O2 O N N 156 DC N3 N N N 157 DC C4 C N N 158 DC N4 N N N 159 DC C5 C N N 160 DC C6 C N N 161 DC HOP3 H N N 162 DC HOP2 H N N 163 DC "H5'" H N N 164 DC "H5''" H N N 165 DC "H4'" H N N 166 DC "H3'" H N N 167 DC "HO3'" H N N 168 DC "H2'" H N N 169 DC "H2''" H N N 170 DC "H1'" H N N 171 DC H41 H N N 172 DC H42 H N N 173 DC H5 H N N 174 DC H6 H N N 175 DG OP3 O N N 176 DG P P N N 177 DG OP1 O N N 178 DG OP2 O N N 179 DG "O5'" O N N 180 DG "C5'" C N N 181 DG "C4'" C N R 182 DG "O4'" O N N 183 DG "C3'" C N S 184 DG "O3'" O N N 185 DG "C2'" C N N 186 DG "C1'" C N R 187 DG N9 N Y N 188 DG C8 C Y N 189 DG N7 N Y N 190 DG C5 C Y N 191 DG C6 C N N 192 DG O6 O N N 193 DG N1 N N N 194 DG C2 C N N 195 DG N2 N N N 196 DG N3 N N N 197 DG C4 C Y N 198 DG HOP3 H N N 199 DG HOP2 H N N 200 DG "H5'" H N N 201 DG "H5''" H N N 202 DG "H4'" H N N 203 DG "H3'" H N N 204 DG "HO3'" H N N 205 DG "H2'" H N N 206 DG "H2''" H N N 207 DG "H1'" H N N 208 DG H8 H N N 209 DG H1 H N N 210 DG H21 H N N 211 DG H22 H N N 212 DT OP3 O N N 213 DT P P N N 214 DT OP1 O N N 215 DT OP2 O N N 216 DT "O5'" O N N 217 DT "C5'" C N N 218 DT "C4'" C N R 219 DT "O4'" O N N 220 DT "C3'" C N S 221 DT "O3'" O N N 222 DT "C2'" C N N 223 DT "C1'" C N R 224 DT N1 N N N 225 DT C2 C N N 226 DT O2 O N N 227 DT N3 N N N 228 DT C4 C N N 229 DT O4 O N N 230 DT C5 C N N 231 DT C7 C N N 232 DT C6 C N N 233 DT HOP3 H N N 234 DT HOP2 H N N 235 DT "H5'" H N N 236 DT "H5''" H N N 237 DT "H4'" H N N 238 DT "H3'" H N N 239 DT "HO3'" H N N 240 DT "H2'" H N N 241 DT "H2''" H N N 242 DT "H1'" H N N 243 DT H3 H N N 244 DT H71 H N N 245 DT H72 H N N 246 DT H73 H N N 247 DT H6 H N N 248 GLN N N N N 249 GLN CA C N S 250 GLN C C N N 251 GLN O O N N 252 GLN CB C N N 253 GLN CG C N N 254 GLN CD C N N 255 GLN OE1 O N N 256 GLN NE2 N N N 257 GLN OXT O N N 258 GLN H H N N 259 GLN H2 H N N 260 GLN HA H N N 261 GLN HB2 H N N 262 GLN HB3 H N N 263 GLN HG2 H N N 264 GLN HG3 H N N 265 GLN HE21 H N N 266 GLN HE22 H N N 267 GLN HXT H N N 268 GLU N N N N 269 GLU CA C N S 270 GLU C C N N 271 GLU O O N N 272 GLU CB C N N 273 GLU CG C N N 274 GLU CD C N N 275 GLU OE1 O N N 276 GLU OE2 O N N 277 GLU OXT O N N 278 GLU H H N N 279 GLU H2 H N N 280 GLU HA H N N 281 GLU HB2 H N N 282 GLU HB3 H N N 283 GLU HG2 H N N 284 GLU HG3 H N N 285 GLU HE2 H N N 286 GLU HXT H N N 287 GLY N N N N 288 GLY CA C N N 289 GLY C C N N 290 GLY O O N N 291 GLY OXT O N N 292 GLY H H N N 293 GLY H2 H N N 294 GLY HA2 H N N 295 GLY HA3 H N N 296 GLY HXT H N N 297 HIS N N N N 298 HIS CA C N S 299 HIS C C N N 300 HIS O O N N 301 HIS CB C N N 302 HIS CG C Y N 303 HIS ND1 N Y N 304 HIS CD2 C Y N 305 HIS CE1 C Y N 306 HIS NE2 N Y N 307 HIS OXT O N N 308 HIS H H N N 309 HIS H2 H N N 310 HIS HA H N N 311 HIS HB2 H N N 312 HIS HB3 H N N 313 HIS HD1 H N N 314 HIS HD2 H N N 315 HIS HE1 H N N 316 HIS HE2 H N N 317 HIS HXT H N N 318 HOH O O N N 319 HOH H1 H N N 320 HOH H2 H N N 321 ILE N N N N 322 ILE CA C N S 323 ILE C C N N 324 ILE O O N N 325 ILE CB C N S 326 ILE CG1 C N N 327 ILE CG2 C N N 328 ILE CD1 C N N 329 ILE OXT O N N 330 ILE H H N N 331 ILE H2 H N N 332 ILE HA H N N 333 ILE HB H N N 334 ILE HG12 H N N 335 ILE HG13 H N N 336 ILE HG21 H N N 337 ILE HG22 H N N 338 ILE HG23 H N N 339 ILE HD11 H N N 340 ILE HD12 H N N 341 ILE HD13 H N N 342 ILE HXT H N N 343 LEU N N N N 344 LEU CA C N S 345 LEU C C N N 346 LEU O O N N 347 LEU CB C N N 348 LEU CG C N N 349 LEU CD1 C N N 350 LEU CD2 C N N 351 LEU OXT O N N 352 LEU H H N N 353 LEU H2 H N N 354 LEU HA H N N 355 LEU HB2 H N N 356 LEU HB3 H N N 357 LEU HG H N N 358 LEU HD11 H N N 359 LEU HD12 H N N 360 LEU HD13 H N N 361 LEU HD21 H N N 362 LEU HD22 H N N 363 LEU HD23 H N N 364 LEU HXT H N N 365 LYS N N N N 366 LYS CA C N S 367 LYS C C N N 368 LYS O O N N 369 LYS CB C N N 370 LYS CG C N N 371 LYS CD C N N 372 LYS CE C N N 373 LYS NZ N N N 374 LYS OXT O N N 375 LYS H H N N 376 LYS H2 H N N 377 LYS HA H N N 378 LYS HB2 H N N 379 LYS HB3 H N N 380 LYS HG2 H N N 381 LYS HG3 H N N 382 LYS HD2 H N N 383 LYS HD3 H N N 384 LYS HE2 H N N 385 LYS HE3 H N N 386 LYS HZ1 H N N 387 LYS HZ2 H N N 388 LYS HZ3 H N N 389 LYS HXT H N N 390 MET N N N N 391 MET CA C N S 392 MET C C N N 393 MET O O N N 394 MET CB C N N 395 MET CG C N N 396 MET SD S N N 397 MET CE C N N 398 MET OXT O N N 399 MET H H N N 400 MET H2 H N N 401 MET HA H N N 402 MET HB2 H N N 403 MET HB3 H N N 404 MET HG2 H N N 405 MET HG3 H N N 406 MET HE1 H N N 407 MET HE2 H N N 408 MET HE3 H N N 409 MET HXT H N N 410 NI NI NI N N 411 PHE N N N N 412 PHE CA C N S 413 PHE C C N N 414 PHE O O N N 415 PHE CB C N N 416 PHE CG C Y N 417 PHE CD1 C Y N 418 PHE CD2 C Y N 419 PHE CE1 C Y N 420 PHE CE2 C Y N 421 PHE CZ C Y N 422 PHE OXT O N N 423 PHE H H N N 424 PHE H2 H N N 425 PHE HA H N N 426 PHE HB2 H N N 427 PHE HB3 H N N 428 PHE HD1 H N N 429 PHE HD2 H N N 430 PHE HE1 H N N 431 PHE HE2 H N N 432 PHE HZ H N N 433 PHE HXT H N N 434 SER N N N N 435 SER CA C N S 436 SER C C N N 437 SER O O N N 438 SER CB C N N 439 SER OG O N N 440 SER OXT O N N 441 SER H H N N 442 SER H2 H N N 443 SER HA H N N 444 SER HB2 H N N 445 SER HB3 H N N 446 SER HG H N N 447 SER HXT H N N 448 THR N N N N 449 THR CA C N S 450 THR C C N N 451 THR O O N N 452 THR CB C N R 453 THR OG1 O N N 454 THR CG2 C N N 455 THR OXT O N N 456 THR H H N N 457 THR H2 H N N 458 THR HA H N N 459 THR HB H N N 460 THR HG1 H N N 461 THR HG21 H N N 462 THR HG22 H N N 463 THR HG23 H N N 464 THR HXT H N N 465 TRP N N N N 466 TRP CA C N S 467 TRP C C N N 468 TRP O O N N 469 TRP CB C N N 470 TRP CG C Y N 471 TRP CD1 C Y N 472 TRP CD2 C Y N 473 TRP NE1 N Y N 474 TRP CE2 C Y N 475 TRP CE3 C Y N 476 TRP CZ2 C Y N 477 TRP CZ3 C Y N 478 TRP CH2 C Y N 479 TRP OXT O N N 480 TRP H H N N 481 TRP H2 H N N 482 TRP HA H N N 483 TRP HB2 H N N 484 TRP HB3 H N N 485 TRP HD1 H N N 486 TRP HE1 H N N 487 TRP HE3 H N N 488 TRP HZ2 H N N 489 TRP HZ3 H N N 490 TRP HH2 H N N 491 TRP HXT H N N 492 TYR N N N N 493 TYR CA C N S 494 TYR C C N N 495 TYR O O N N 496 TYR CB C N N 497 TYR CG C Y N 498 TYR CD1 C Y N 499 TYR CD2 C Y N 500 TYR CE1 C Y N 501 TYR CE2 C Y N 502 TYR CZ C Y N 503 TYR OH O N N 504 TYR OXT O N N 505 TYR H H N N 506 TYR H2 H N N 507 TYR HA H N N 508 TYR HB2 H N N 509 TYR HB3 H N N 510 TYR HD1 H N N 511 TYR HD2 H N N 512 TYR HE1 H N N 513 TYR HE2 H N N 514 TYR HH H N N 515 TYR HXT H N N 516 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 C7S "O3'" "C3'" sing N N 55 C7S O2 C2 doub N N 56 C7S "C4'" "C3'" sing N N 57 C7S "C4'" "O4'" sing N N 58 C7S "C4'" "C5'" sing N N 59 C7S "C1'" "O4'" sing N N 60 C7S "C1'" "C2'" sing N N 61 C7S "C1'" N1 sing N N 62 C7S "C3'" "C2'" sing N N 63 C7S C2 N1 sing N N 64 C7S C2 N3 sing N N 65 C7S "C5'" "O5'" sing N N 66 C7S N1 C6 sing N N 67 C7S N3 C4 doub N N 68 C7S "O5'" P sing N N 69 C7S C6 C5 doub N N 70 C7S C4 N4 sing N N 71 C7S C4 C5 sing N N 72 C7S SP1 P sing N N 73 C7S P OP2 doub N N 74 C7S P OP3 sing N N 75 C7S "C5'" H1 sing N N 76 C7S "C5'" H2 sing N N 77 C7S "C4'" H3 sing N N 78 C7S "C3'" H4 sing N N 79 C7S "O3'" H5 sing N N 80 C7S "C2'" H6 sing N N 81 C7S "C2'" H7 sing N N 82 C7S "C1'" H8 sing N N 83 C7S N4 H9 sing N N 84 C7S N4 H10 sing N N 85 C7S C5 H11 sing N N 86 C7S C6 H12 sing N N 87 C7S SP1 HSP1 sing N N 88 C7S OP3 HOP3 sing N N 89 CYS N CA sing N N 90 CYS N H sing N N 91 CYS N H2 sing N N 92 CYS CA C sing N N 93 CYS CA CB sing N N 94 CYS CA HA sing N N 95 CYS C O doub N N 96 CYS C OXT sing N N 97 CYS CB SG sing N N 98 CYS CB HB2 sing N N 99 CYS CB HB3 sing N N 100 CYS SG HG sing N N 101 CYS OXT HXT sing N N 102 DA OP3 P sing N N 103 DA OP3 HOP3 sing N N 104 DA P OP1 doub N N 105 DA P OP2 sing N N 106 DA P "O5'" sing N N 107 DA OP2 HOP2 sing N N 108 DA "O5'" "C5'" sing N N 109 DA "C5'" "C4'" sing N N 110 DA "C5'" "H5'" sing N N 111 DA "C5'" "H5''" sing N N 112 DA "C4'" "O4'" sing N N 113 DA "C4'" "C3'" sing N N 114 DA "C4'" "H4'" sing N N 115 DA "O4'" "C1'" sing N N 116 DA "C3'" "O3'" sing N N 117 DA "C3'" "C2'" sing N N 118 DA "C3'" "H3'" sing N N 119 DA "O3'" "HO3'" sing N N 120 DA "C2'" "C1'" sing N N 121 DA "C2'" "H2'" sing N N 122 DA "C2'" "H2''" sing N N 123 DA "C1'" N9 sing N N 124 DA "C1'" "H1'" sing N N 125 DA N9 C8 sing Y N 126 DA N9 C4 sing Y N 127 DA C8 N7 doub Y N 128 DA C8 H8 sing N N 129 DA N7 C5 sing Y N 130 DA C5 C6 sing Y N 131 DA C5 C4 doub Y N 132 DA C6 N6 sing N N 133 DA C6 N1 doub Y N 134 DA N6 H61 sing N N 135 DA N6 H62 sing N N 136 DA N1 C2 sing Y N 137 DA C2 N3 doub Y N 138 DA C2 H2 sing N N 139 DA N3 C4 sing Y N 140 DC OP3 P sing N N 141 DC OP3 HOP3 sing N N 142 DC P OP1 doub N N 143 DC P OP2 sing N N 144 DC P "O5'" sing N N 145 DC OP2 HOP2 sing N N 146 DC "O5'" "C5'" sing N N 147 DC "C5'" "C4'" sing N N 148 DC "C5'" "H5'" sing N N 149 DC "C5'" "H5''" sing N N 150 DC "C4'" "O4'" sing N N 151 DC "C4'" "C3'" sing N N 152 DC "C4'" "H4'" sing N N 153 DC "O4'" "C1'" sing N N 154 DC "C3'" "O3'" sing N N 155 DC "C3'" "C2'" sing N N 156 DC "C3'" "H3'" sing N N 157 DC "O3'" "HO3'" sing N N 158 DC "C2'" "C1'" sing N N 159 DC "C2'" "H2'" sing N N 160 DC "C2'" "H2''" sing N N 161 DC "C1'" N1 sing N N 162 DC "C1'" "H1'" sing N N 163 DC N1 C2 sing N N 164 DC N1 C6 sing N N 165 DC C2 O2 doub N N 166 DC C2 N3 sing N N 167 DC N3 C4 doub N N 168 DC C4 N4 sing N N 169 DC C4 C5 sing N N 170 DC N4 H41 sing N N 171 DC N4 H42 sing N N 172 DC C5 C6 doub N N 173 DC C5 H5 sing N N 174 DC C6 H6 sing N N 175 DG OP3 P sing N N 176 DG OP3 HOP3 sing N N 177 DG P OP1 doub N N 178 DG P OP2 sing N N 179 DG P "O5'" sing N N 180 DG OP2 HOP2 sing N N 181 DG "O5'" "C5'" sing N N 182 DG "C5'" "C4'" sing N N 183 DG "C5'" "H5'" sing N N 184 DG "C5'" "H5''" sing N N 185 DG "C4'" "O4'" sing N N 186 DG "C4'" "C3'" sing N N 187 DG "C4'" "H4'" sing N N 188 DG "O4'" "C1'" sing N N 189 DG "C3'" "O3'" sing N N 190 DG "C3'" "C2'" sing N N 191 DG "C3'" "H3'" sing N N 192 DG "O3'" "HO3'" sing N N 193 DG "C2'" "C1'" sing N N 194 DG "C2'" "H2'" sing N N 195 DG "C2'" "H2''" sing N N 196 DG "C1'" N9 sing N N 197 DG "C1'" "H1'" sing N N 198 DG N9 C8 sing Y N 199 DG N9 C4 sing Y N 200 DG C8 N7 doub Y N 201 DG C8 H8 sing N N 202 DG N7 C5 sing Y N 203 DG C5 C6 sing N N 204 DG C5 C4 doub Y N 205 DG C6 O6 doub N N 206 DG C6 N1 sing N N 207 DG N1 C2 sing N N 208 DG N1 H1 sing N N 209 DG C2 N2 sing N N 210 DG C2 N3 doub N N 211 DG N2 H21 sing N N 212 DG N2 H22 sing N N 213 DG N3 C4 sing N N 214 DT OP3 P sing N N 215 DT OP3 HOP3 sing N N 216 DT P OP1 doub N N 217 DT P OP2 sing N N 218 DT P "O5'" sing N N 219 DT OP2 HOP2 sing N N 220 DT "O5'" "C5'" sing N N 221 DT "C5'" "C4'" sing N N 222 DT "C5'" "H5'" sing N N 223 DT "C5'" "H5''" sing N N 224 DT "C4'" "O4'" sing N N 225 DT "C4'" "C3'" sing N N 226 DT "C4'" "H4'" sing N N 227 DT "O4'" "C1'" sing N N 228 DT "C3'" "O3'" sing N N 229 DT "C3'" "C2'" sing N N 230 DT "C3'" "H3'" sing N N 231 DT "O3'" "HO3'" sing N N 232 DT "C2'" "C1'" sing N N 233 DT "C2'" "H2'" sing N N 234 DT "C2'" "H2''" sing N N 235 DT "C1'" N1 sing N N 236 DT "C1'" "H1'" sing N N 237 DT N1 C2 sing N N 238 DT N1 C6 sing N N 239 DT C2 O2 doub N N 240 DT C2 N3 sing N N 241 DT N3 C4 sing N N 242 DT N3 H3 sing N N 243 DT C4 O4 doub N N 244 DT C4 C5 sing N N 245 DT C5 C7 sing N N 246 DT C5 C6 doub N N 247 DT C7 H71 sing N N 248 DT C7 H72 sing N N 249 DT C7 H73 sing N N 250 DT C6 H6 sing N N 251 GLN N CA sing N N 252 GLN N H sing N N 253 GLN N H2 sing N N 254 GLN CA C sing N N 255 GLN CA CB sing N N 256 GLN CA HA sing N N 257 GLN C O doub N N 258 GLN C OXT sing N N 259 GLN CB CG sing N N 260 GLN CB HB2 sing N N 261 GLN CB HB3 sing N N 262 GLN CG CD sing N N 263 GLN CG HG2 sing N N 264 GLN CG HG3 sing N N 265 GLN CD OE1 doub N N 266 GLN CD NE2 sing N N 267 GLN NE2 HE21 sing N N 268 GLN NE2 HE22 sing N N 269 GLN OXT HXT sing N N 270 GLU N CA sing N N 271 GLU N H sing N N 272 GLU N H2 sing N N 273 GLU CA C sing N N 274 GLU CA CB sing N N 275 GLU CA HA sing N N 276 GLU C O doub N N 277 GLU C OXT sing N N 278 GLU CB CG sing N N 279 GLU CB HB2 sing N N 280 GLU CB HB3 sing N N 281 GLU CG CD sing N N 282 GLU CG HG2 sing N N 283 GLU CG HG3 sing N N 284 GLU CD OE1 doub N N 285 GLU CD OE2 sing N N 286 GLU OE2 HE2 sing N N 287 GLU OXT HXT sing N N 288 GLY N CA sing N N 289 GLY N H sing N N 290 GLY N H2 sing N N 291 GLY CA C sing N N 292 GLY CA HA2 sing N N 293 GLY CA HA3 sing N N 294 GLY C O doub N N 295 GLY C OXT sing N N 296 GLY OXT HXT sing N N 297 HIS N CA sing N N 298 HIS N H sing N N 299 HIS N H2 sing N N 300 HIS CA C sing N N 301 HIS CA CB sing N N 302 HIS CA HA sing N N 303 HIS C O doub N N 304 HIS C OXT sing N N 305 HIS CB CG sing N N 306 HIS CB HB2 sing N N 307 HIS CB HB3 sing N N 308 HIS CG ND1 sing Y N 309 HIS CG CD2 doub Y N 310 HIS ND1 CE1 doub Y N 311 HIS ND1 HD1 sing N N 312 HIS CD2 NE2 sing Y N 313 HIS CD2 HD2 sing N N 314 HIS CE1 NE2 sing Y N 315 HIS CE1 HE1 sing N N 316 HIS NE2 HE2 sing N N 317 HIS OXT HXT sing N N 318 HOH O H1 sing N N 319 HOH O H2 sing N N 320 ILE N CA sing N N 321 ILE N H sing N N 322 ILE N H2 sing N N 323 ILE CA C sing N N 324 ILE CA CB sing N N 325 ILE CA HA sing N N 326 ILE C O doub N N 327 ILE C OXT sing N N 328 ILE CB CG1 sing N N 329 ILE CB CG2 sing N N 330 ILE CB HB sing N N 331 ILE CG1 CD1 sing N N 332 ILE CG1 HG12 sing N N 333 ILE CG1 HG13 sing N N 334 ILE CG2 HG21 sing N N 335 ILE CG2 HG22 sing N N 336 ILE CG2 HG23 sing N N 337 ILE CD1 HD11 sing N N 338 ILE CD1 HD12 sing N N 339 ILE CD1 HD13 sing N N 340 ILE OXT HXT sing N N 341 LEU N CA sing N N 342 LEU N H sing N N 343 LEU N H2 sing N N 344 LEU CA C sing N N 345 LEU CA CB sing N N 346 LEU CA HA sing N N 347 LEU C O doub N N 348 LEU C OXT sing N N 349 LEU CB CG sing N N 350 LEU CB HB2 sing N N 351 LEU CB HB3 sing N N 352 LEU CG CD1 sing N N 353 LEU CG CD2 sing N N 354 LEU CG HG sing N N 355 LEU CD1 HD11 sing N N 356 LEU CD1 HD12 sing N N 357 LEU CD1 HD13 sing N N 358 LEU CD2 HD21 sing N N 359 LEU CD2 HD22 sing N N 360 LEU CD2 HD23 sing N N 361 LEU OXT HXT sing N N 362 LYS N CA sing N N 363 LYS N H sing N N 364 LYS N H2 sing N N 365 LYS CA C sing N N 366 LYS CA CB sing N N 367 LYS CA HA sing N N 368 LYS C O doub N N 369 LYS C OXT sing N N 370 LYS CB CG sing N N 371 LYS CB HB2 sing N N 372 LYS CB HB3 sing N N 373 LYS CG CD sing N N 374 LYS CG HG2 sing N N 375 LYS CG HG3 sing N N 376 LYS CD CE sing N N 377 LYS CD HD2 sing N N 378 LYS CD HD3 sing N N 379 LYS CE NZ sing N N 380 LYS CE HE2 sing N N 381 LYS CE HE3 sing N N 382 LYS NZ HZ1 sing N N 383 LYS NZ HZ2 sing N N 384 LYS NZ HZ3 sing N N 385 LYS OXT HXT sing N N 386 MET N CA sing N N 387 MET N H sing N N 388 MET N H2 sing N N 389 MET CA C sing N N 390 MET CA CB sing N N 391 MET CA HA sing N N 392 MET C O doub N N 393 MET C OXT sing N N 394 MET CB CG sing N N 395 MET CB HB2 sing N N 396 MET CB HB3 sing N N 397 MET CG SD sing N N 398 MET CG HG2 sing N N 399 MET CG HG3 sing N N 400 MET SD CE sing N N 401 MET CE HE1 sing N N 402 MET CE HE2 sing N N 403 MET CE HE3 sing N N 404 MET OXT HXT sing N N 405 PHE N CA sing N N 406 PHE N H sing N N 407 PHE N H2 sing N N 408 PHE CA C sing N N 409 PHE CA CB sing N N 410 PHE CA HA sing N N 411 PHE C O doub N N 412 PHE C OXT sing N N 413 PHE CB CG sing N N 414 PHE CB HB2 sing N N 415 PHE CB HB3 sing N N 416 PHE CG CD1 doub Y N 417 PHE CG CD2 sing Y N 418 PHE CD1 CE1 sing Y N 419 PHE CD1 HD1 sing N N 420 PHE CD2 CE2 doub Y N 421 PHE CD2 HD2 sing N N 422 PHE CE1 CZ doub Y N 423 PHE CE1 HE1 sing N N 424 PHE CE2 CZ sing Y N 425 PHE CE2 HE2 sing N N 426 PHE CZ HZ sing N N 427 PHE OXT HXT sing N N 428 SER N CA sing N N 429 SER N H sing N N 430 SER N H2 sing N N 431 SER CA C sing N N 432 SER CA CB sing N N 433 SER CA HA sing N N 434 SER C O doub N N 435 SER C OXT sing N N 436 SER CB OG sing N N 437 SER CB HB2 sing N N 438 SER CB HB3 sing N N 439 SER OG HG sing N N 440 SER OXT HXT sing N N 441 THR N CA sing N N 442 THR N H sing N N 443 THR N H2 sing N N 444 THR CA C sing N N 445 THR CA CB sing N N 446 THR CA HA sing N N 447 THR C O doub N N 448 THR C OXT sing N N 449 THR CB OG1 sing N N 450 THR CB CG2 sing N N 451 THR CB HB sing N N 452 THR OG1 HG1 sing N N 453 THR CG2 HG21 sing N N 454 THR CG2 HG22 sing N N 455 THR CG2 HG23 sing N N 456 THR OXT HXT sing N N 457 TRP N CA sing N N 458 TRP N H sing N N 459 TRP N H2 sing N N 460 TRP CA C sing N N 461 TRP CA CB sing N N 462 TRP CA HA sing N N 463 TRP C O doub N N 464 TRP C OXT sing N N 465 TRP CB CG sing N N 466 TRP CB HB2 sing N N 467 TRP CB HB3 sing N N 468 TRP CG CD1 doub Y N 469 TRP CG CD2 sing Y N 470 TRP CD1 NE1 sing Y N 471 TRP CD1 HD1 sing N N 472 TRP CD2 CE2 doub Y N 473 TRP CD2 CE3 sing Y N 474 TRP NE1 CE2 sing Y N 475 TRP NE1 HE1 sing N N 476 TRP CE2 CZ2 sing Y N 477 TRP CE3 CZ3 doub Y N 478 TRP CE3 HE3 sing N N 479 TRP CZ2 CH2 doub Y N 480 TRP CZ2 HZ2 sing N N 481 TRP CZ3 CH2 sing Y N 482 TRP CZ3 HZ3 sing N N 483 TRP CH2 HH2 sing N N 484 TRP OXT HXT sing N N 485 TYR N CA sing N N 486 TYR N H sing N N 487 TYR N H2 sing N N 488 TYR CA C sing N N 489 TYR CA CB sing N N 490 TYR CA HA sing N N 491 TYR C O doub N N 492 TYR C OXT sing N N 493 TYR CB CG sing N N 494 TYR CB HB2 sing N N 495 TYR CB HB3 sing N N 496 TYR CG CD1 doub Y N 497 TYR CG CD2 sing Y N 498 TYR CD1 CE1 sing Y N 499 TYR CD1 HD1 sing N N 500 TYR CD2 CE2 doub Y N 501 TYR CD2 HD2 sing N N 502 TYR CE1 CZ doub Y N 503 TYR CE1 HE1 sing N N 504 TYR CE2 CZ sing Y N 505 TYR CE2 HE2 sing N N 506 TYR CZ OH sing N N 507 TYR OH HH sing N N 508 TYR OXT HXT sing N N 509 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5JLX 'double helix' 5JLX 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 2 1_555 C DC 15 1_555 -0.165 -0.297 0.074 8.481 -5.876 0.591 1 B_DG1:DC14_C B 1 ? C 14 ? 19 1 1 B DA 3 1_555 C DT 14 1_555 -0.028 0.322 0.348 11.324 -17.508 -2.351 2 B_DA2:DT13_C B 2 ? C 13 ? 20 1 1 B DA 4 1_555 C DT 13 1_555 0.885 0.084 0.877 12.715 -17.384 7.134 3 B_DA3:DT12_C B 3 ? C 12 ? ? ? 1 B DA 5 1_555 C DT 12 1_555 0.260 0.108 0.283 7.007 -11.543 1.401 4 B_DA4:DT11_C B 4 ? C 11 ? 20 1 1 B DG 6 1_555 C DC 11 1_555 -0.288 -0.239 0.591 0.689 -15.351 3.670 5 B_DG5:DC10_C B 5 ? C 10 ? 19 1 1 B DC 7 1_555 C DG 10 1_555 -0.606 0.026 0.041 -2.559 -6.942 4.433 6 B_DC6:DG9_C B 6 ? C 9 ? 19 1 1 B C7S 8 1_555 C DG 9 1_555 0.197 -0.226 0.169 -0.551 -12.670 4.083 7 B_C7S7:DG8_C B 7 ? C 8 ? 19 1 1 B DA 9 1_555 C DT 8 1_555 -0.032 -0.367 0.362 0.193 -18.605 3.053 8 B_DA8:DT7_C B 8 ? C 7 ? 20 1 1 B DT 10 1_555 C DA 7 1_555 -0.330 -0.150 0.024 4.783 -15.637 4.576 9 B_DT9:DA6_C B 9 ? C 6 ? 20 1 1 B DT 11 1_555 C DA 6 1_555 0.704 -0.146 0.059 -5.144 -15.031 1.447 10 B_DT10:DA5_C B 10 ? C 5 ? 20 1 1 B DA 12 1_555 C DT 5 1_555 -0.199 -0.123 -0.299 -9.632 -5.084 3.832 11 B_DA11:DT4_C B 11 ? C 4 ? 20 1 1 B DG 13 1_555 C DC 4 1_555 0.046 -0.297 0.102 -3.425 -6.129 0.287 12 B_DG12:DC3_C B 12 ? C 3 ? 19 1 1 B DA 14 1_555 C DT 3 1_555 0.360 -0.362 0.363 5.619 -11.940 -1.441 13 B_DA13:DT2_C B 13 ? C 2 ? 20 1 1 B DG 15 1_555 C DC 2 1_555 0.076 -0.071 0.300 14.441 -4.970 -3.955 14 B_DG14:DC1_C B 14 ? C 1 ? 19 1 1 E DG 2 1_555 F DC 15 1_555 -0.450 0.021 -0.052 6.721 -9.493 8.677 15 E_DG2:DC15_F E 2 ? F 15 ? 19 1 1 E DA 3 1_555 F DT 14 1_555 -0.165 -0.196 0.095 12.711 -18.369 1.360 16 E_DA3:DT14_F E 3 ? F 14 ? 20 1 1 E DA 4 1_555 F DT 13 1_555 0.236 -0.163 0.600 11.010 -13.160 2.905 17 E_DA4:DT13_F E 4 ? F 13 ? 20 1 1 E DA 5 1_555 F DT 12 1_555 -0.472 -0.277 0.307 8.380 -12.635 0.510 18 E_DA5:DT12_F E 5 ? F 12 ? 20 1 1 E DG 6 1_555 F DC 11 1_555 -0.732 -0.463 0.390 -1.155 -15.982 -1.093 19 E_DG6:DC11_F E 6 ? F 11 ? 19 1 1 E DC 7 1_555 F DG 10 1_555 -0.207 -0.165 0.030 0.687 -4.593 -4.142 20 E_DC7:DG10_F E 7 ? F 10 ? 19 1 1 E C7S 8 1_555 F DG 9 1_555 -0.598 0.081 0.206 -4.997 -6.013 -0.036 21 E_C7S8:DG9_F E 8 ? F 9 ? 19 1 1 E DA 9 1_555 F DT 8 1_555 0.015 -0.145 -0.282 -2.773 -9.123 0.726 22 E_DA9:DT8_F E 9 ? F 8 ? 20 1 1 E DT 10 1_555 F DA 7 1_555 -0.686 -0.235 0.254 0.805 -13.388 6.940 23 E_DT10:DA7_F E 10 ? F 7 ? 20 1 1 E DT 11 1_555 F DA 6 1_555 -0.089 0.015 -0.004 -1.311 -13.456 6.446 24 E_DT11:DA6_F E 11 ? F 6 ? 20 1 1 E DA 12 1_555 F DT 5 1_555 -0.002 0.117 -0.197 -4.659 -6.346 9.933 25 E_DA12:DT5_F E 12 ? F 5 ? 20 1 1 E DG 13 1_555 F DC 4 1_555 0.286 -0.011 -0.168 -1.057 -8.357 5.293 26 E_DG13:DC4_F E 13 ? F 4 ? 19 1 1 E DA 14 1_555 F DT 3 1_555 0.873 0.174 0.299 2.310 -4.996 1.556 27 E_DA14:DT3_F E 14 ? F 3 ? 20 1 1 E DG 15 1_555 F DC 2 1_555 1.152 0.176 0.216 1.454 -11.518 -6.041 28 E_DG15:DC2_F E 15 ? F 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 2 1_555 C DC 15 1_555 B DA 3 1_555 C DT 14 1_555 -0.554 0.539 3.180 -3.278 1.800 38.245 0.599 0.440 3.236 2.739 4.989 38.420 1 BB_DG1DA2:DT13DC14_CC B 1 ? C 14 ? B 2 ? C 13 ? 1 B DA 3 1_555 C DT 14 1_555 B DA 4 1_555 C DT 13 1_555 0.539 -0.320 3.177 -0.800 -3.086 41.082 -0.131 -0.850 3.181 -4.390 1.138 41.200 2 BB_DA2DA3:DT12DT13_CC B 2 ? C 13 ? B 3 ? C 12 ? 1 B DA 4 1_555 C DT 13 1_555 B DA 5 1_555 C DT 12 1_555 -0.071 -0.838 3.325 2.444 -5.013 31.470 -0.581 0.588 3.399 -9.153 -4.463 31.948 3 BB_DA3DA4:DT11DT12_CC B 3 ? C 12 ? B 4 ? C 11 ? 1 B DA 5 1_555 C DT 12 1_555 B DG 6 1_555 C DC 11 1_555 0.452 -1.031 3.316 -4.508 1.781 33.916 -2.031 -1.476 3.174 3.033 7.678 34.251 4 BB_DA4DG5:DC10DT11_CC B 4 ? C 11 ? B 5 ? C 10 ? 1 B DG 6 1_555 C DC 11 1_555 B DC 7 1_555 C DG 10 1_555 -0.412 -0.479 3.333 4.059 -1.696 32.858 -0.551 1.416 3.280 -2.982 -7.136 33.143 5 BB_DG5DC6:DG9DC10_CC B 5 ? C 10 ? B 6 ? C 9 ? 1 B DC 7 1_555 C DG 10 1_555 B C7S 8 1_555 C DG 9 1_555 0.368 0.443 3.273 2.100 6.509 34.070 -0.271 -0.289 3.314 10.973 -3.539 34.730 6 BB_DC6C7S7:DG8DG9_CC B 6 ? C 9 ? B 7 ? C 8 ? 1 B C7S 8 1_555 C DG 9 1_555 B DA 9 1_555 C DT 8 1_555 -0.257 0.460 3.264 -1.431 9.400 34.585 -0.628 0.208 3.281 15.453 2.352 35.830 7 BB_C7S7DA8:DT7DG8_CC B 7 ? C 8 ? B 8 ? C 7 ? 1 B DA 9 1_555 C DT 8 1_555 B DT 10 1_555 C DA 7 1_555 0.510 -0.937 3.210 1.056 -2.410 30.005 -1.313 -0.767 3.289 -4.644 -2.035 30.118 8 BB_DA8DT9:DA6DT7_CC B 8 ? C 7 ? B 9 ? C 6 ? 1 B DT 10 1_555 C DA 7 1_555 B DT 11 1_555 C DA 6 1_555 -0.534 -0.465 3.528 -0.286 4.330 36.727 -1.358 0.801 3.457 6.843 0.452 36.974 9 BB_DT9DT10:DA5DA6_CC B 9 ? C 6 ? B 10 ? C 5 ? 1 B DT 11 1_555 C DA 6 1_555 B DA 12 1_555 C DT 5 1_555 0.828 0.668 3.443 4.394 0.259 35.820 1.040 -0.673 3.521 0.419 -7.110 36.081 10 BB_DT10DA11:DT4DA5_CC B 10 ? C 5 ? B 11 ? C 4 ? 1 B DA 12 1_555 C DT 5 1_555 B DG 13 1_555 C DC 4 1_555 -0.900 0.584 3.179 -5.678 4.252 34.660 0.331 0.640 3.326 7.045 9.408 35.357 11 BB_DA11DG12:DC3DT4_CC B 11 ? C 4 ? B 12 ? C 3 ? 1 B DG 13 1_555 C DC 4 1_555 B DA 14 1_555 C DT 3 1_555 -0.590 0.702 3.228 -4.741 -3.838 38.555 1.508 0.319 3.194 -5.769 7.125 39.016 12 BB_DG12DA13:DT2DC3_CC B 12 ? C 3 ? B 13 ? C 2 ? 1 B DA 14 1_555 C DT 3 1_555 B DG 15 1_555 C DC 2 1_555 0.366 -0.087 3.138 1.316 7.654 30.749 -1.513 -0.438 3.041 14.153 -2.434 31.692 13 BB_DA13DG14:DC1DT2_CC B 13 ? C 2 ? B 14 ? C 1 ? 1 E DG 2 1_555 F DC 15 1_555 E DA 3 1_555 F DT 14 1_555 -0.719 0.388 3.115 -3.623 2.003 38.743 0.347 0.655 3.182 3.009 5.443 38.955 14 EE_DG2DA3:DT14DC15_FF E 2 ? F 15 ? E 3 ? F 14 ? 1 E DA 3 1_555 F DT 14 1_555 E DA 4 1_555 F DT 13 1_555 0.444 -0.262 3.183 -2.051 -0.192 35.172 -0.405 -1.029 3.154 -0.317 3.391 35.230 15 EE_DA3DA4:DT13DT14_FF E 3 ? F 14 ? E 4 ? F 13 ? 1 E DA 4 1_555 F DT 13 1_555 E DA 5 1_555 F DT 12 1_555 -0.022 -0.666 3.177 0.976 -2.947 33.185 -0.681 0.198 3.221 -5.146 -1.704 33.326 16 EE_DA4DA5:DT12DT13_FF E 4 ? F 13 ? E 5 ? F 12 ? 1 E DA 5 1_555 F DT 12 1_555 E DG 6 1_555 F DC 11 1_555 0.205 -0.873 3.469 -6.573 2.901 35.488 -1.832 -1.297 3.301 4.699 10.649 36.185 17 EE_DA5DG6:DC11DT12_FF E 5 ? F 12 ? E 6 ? F 11 ? 1 E DG 6 1_555 F DC 11 1_555 E DC 7 1_555 F DG 10 1_555 -0.456 -0.550 3.279 4.813 -1.970 35.334 -0.612 1.439 3.216 -3.223 -7.877 35.703 18 EE_DG6DC7:DG10DC11_FF E 6 ? F 11 ? E 7 ? F 10 ? 1 E DC 7 1_555 F DG 10 1_555 E C7S 8 1_555 F DG 9 1_555 0.601 -0.224 3.404 1.059 8.896 29.694 -2.196 -0.913 3.222 16.881 -2.010 30.987 19 EE_DC7C7S8:DG9DG10_FF E 7 ? F 10 ? E 8 ? F 9 ? 1 E C7S 8 1_555 F DG 9 1_555 E DA 9 1_555 F DT 8 1_555 -0.414 0.363 3.306 0.644 8.611 37.236 -0.556 0.716 3.299 13.268 -0.992 38.189 20 EE_C7S8DA9:DT8DG9_FF E 8 ? F 9 ? E 9 ? F 8 ? 1 E DA 9 1_555 F DT 8 1_555 E DT 10 1_555 F DA 7 1_555 0.724 -0.879 3.177 -3.329 -0.648 28.878 -1.614 -2.145 3.095 -1.294 6.645 29.072 21 EE_DA9DT10:DA7DT8_FF E 9 ? F 8 ? E 10 ? F 7 ? 1 E DT 10 1_555 F DA 7 1_555 E DT 11 1_555 F DA 6 1_555 -0.400 -0.393 3.381 0.522 2.076 33.990 -1.010 0.768 3.345 3.546 -0.892 34.055 22 EE_DT10DT11:DA6DA7_FF E 10 ? F 7 ? E 11 ? F 6 ? 1 E DT 11 1_555 F DA 6 1_555 E DA 12 1_555 F DT 5 1_555 1.050 1.013 3.319 3.301 4.472 39.155 0.948 -1.147 3.483 6.632 -4.896 39.532 23 EE_DT11DA12:DT5DA6_FF E 11 ? F 6 ? E 12 ? F 5 ? 1 E DA 12 1_555 F DT 5 1_555 E DG 13 1_555 F DC 4 1_555 -0.920 0.526 3.072 -4.020 7.087 33.850 -0.171 0.943 3.198 11.958 6.784 34.789 24 EE_DA12DG13:DC4DT5_FF E 12 ? F 5 ? E 13 ? F 4 ? 1 E DG 13 1_555 F DC 4 1_555 E DA 14 1_555 F DT 3 1_555 -0.685 0.110 3.183 -6.937 1.927 37.204 -0.076 0.171 3.255 2.986 10.750 37.870 25 EE_DG13DA14:DT3DC4_FF E 13 ? F 4 ? E 14 ? F 3 ? 1 E DA 14 1_555 F DT 3 1_555 E DG 15 1_555 F DC 2 1_555 -0.368 -0.332 3.404 -1.291 -1.428 33.388 -0.331 0.417 3.426 -2.483 2.246 33.442 26 EE_DA14DG15:DC2DT3_FF E 14 ? F 3 ? E 15 ? F 2 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'NICKEL (II) ION' NI 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4XID _pdbx_initial_refinement_model.details ? #