HEADER TRANSFERASE 29-APR-16 5JMQ TITLE CRYSTAL STRUCTURE OF MUS MUSCULUS PROTEIN ARGININE METHYLTRANSFERASE 2 TITLE 2 WITH CP3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN ARGININE N-METHYLTRANSFERASE 2; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: PRMT2, HRMT1L1, MCG_3122; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: SF21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PDEST20 KEYWDS TRANSFERASE, S-ADENOSYL L-METHIONINE EXPDTA X-RAY DIFFRACTION AUTHOR V.CURA,N.TROFFER-CHARLIER,N.MARECHAL,L.BONNEFOND,J.CAVARELLI REVDAT 4 10-JAN-24 5JMQ 1 REMARK REVDAT 3 30-MAR-22 5JMQ 1 TITLE JRNL REVDAT 2 24-APR-19 5JMQ 1 SOURCE REVDAT 1 10-MAY-17 5JMQ 0 JRNL AUTH V.CURA,N.MARECHAL,N.TROFFER-CHARLIER,J.M.STRUB, JRNL AUTH 2 M.J.VAN HAREN,N.I.MARTIN,S.CIANFERANI,L.BONNEFOND, JRNL AUTH 3 J.CAVARELLI JRNL TITL STRUCTURAL STUDIES OF PROTEIN ARGININE METHYLTRANSFERASE 2 JRNL TITL 2 REVEAL ITS INTERACTIONS WITH POTENTIAL SUBSTRATES AND JRNL TITL 3 INHIBITORS. JRNL REF FEBS J. V. 284 77 2017 JRNL REFN ISSN 1742-464X JRNL PMID 27879050 JRNL DOI 10.1111/FEBS.13953 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1980 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 46333 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 2320 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.3218 - 4.6125 1.00 2779 150 0.1610 0.1962 REMARK 3 2 4.6125 - 3.6617 1.00 2668 139 0.1383 0.1419 REMARK 3 3 3.6617 - 3.1990 1.00 2661 146 0.1609 0.1986 REMARK 3 4 3.1990 - 2.9066 1.00 2621 147 0.1744 0.1778 REMARK 3 5 2.9066 - 2.6983 1.00 2638 123 0.1680 0.1897 REMARK 3 6 2.6983 - 2.5392 1.00 2596 140 0.1706 0.1910 REMARK 3 7 2.5392 - 2.4121 1.00 2654 126 0.1712 0.2136 REMARK 3 8 2.4121 - 2.3071 1.00 2573 150 0.1735 0.2139 REMARK 3 9 2.3071 - 2.2183 1.00 2590 152 0.1783 0.2052 REMARK 3 10 2.2183 - 2.1417 0.99 2605 120 0.2181 0.2439 REMARK 3 11 2.1417 - 2.0748 0.99 2554 155 0.2286 0.2727 REMARK 3 12 2.0748 - 2.0155 0.99 2606 125 0.2280 0.2246 REMARK 3 13 2.0155 - 1.9624 0.99 2580 132 0.2398 0.2699 REMARK 3 14 1.9624 - 1.9145 0.99 2587 137 0.2715 0.2683 REMARK 3 15 1.9145 - 1.8710 0.99 2534 138 0.2908 0.3304 REMARK 3 16 1.8710 - 1.8312 0.99 2580 126 0.3274 0.3205 REMARK 3 17 1.8312 - 1.7945 0.84 2187 114 0.3616 0.3916 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 39.40 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.76 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2851 REMARK 3 ANGLE : 0.878 3869 REMARK 3 CHIRALITY : 0.039 433 REMARK 3 PLANARITY : 0.004 499 REMARK 3 DIHEDRAL : 13.837 1036 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 107 THROUGH 255 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.3327 13.1936 -22.9554 REMARK 3 T TENSOR REMARK 3 T11: 0.1858 T22: 0.2069 REMARK 3 T33: 0.2093 T12: -0.0044 REMARK 3 T13: 0.0164 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 1.5154 L22: 2.2302 REMARK 3 L33: 1.5021 L12: -0.3224 REMARK 3 L13: 0.4196 L23: -0.1835 REMARK 3 S TENSOR REMARK 3 S11: -0.0640 S12: 0.0289 S13: 0.1180 REMARK 3 S21: 0.1004 S22: -0.0134 S23: -0.0394 REMARK 3 S31: -0.1315 S32: 0.1256 S33: 0.0786 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 256 THROUGH 307 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3200 -15.9133 -2.0568 REMARK 3 T TENSOR REMARK 3 T11: 0.2858 T22: 0.1729 REMARK 3 T33: 0.2586 T12: 0.0398 REMARK 3 T13: 0.0466 T23: -0.0321 REMARK 3 L TENSOR REMARK 3 L11: 0.8014 L22: 0.8023 REMARK 3 L33: 7.6629 L12: 0.5042 REMARK 3 L13: -1.8107 L23: -2.1701 REMARK 3 S TENSOR REMARK 3 S11: -0.1058 S12: -0.1090 S13: -0.0165 REMARK 3 S21: 0.0511 S22: -0.0633 S23: -0.1838 REMARK 3 S31: 0.2797 S32: 0.0480 S33: 0.1431 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 308 THROUGH 426 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.2563 -10.5643 -21.2295 REMARK 3 T TENSOR REMARK 3 T11: 0.2358 T22: 0.2515 REMARK 3 T33: 0.2244 T12: 0.0575 REMARK 3 T13: 0.0643 T23: -0.0275 REMARK 3 L TENSOR REMARK 3 L11: 0.5994 L22: 2.3066 REMARK 3 L33: 0.4734 L12: -0.4834 REMARK 3 L13: 0.4890 L23: -0.6857 REMARK 3 S TENSOR REMARK 3 S11: 0.0214 S12: 0.1091 S13: -0.0784 REMARK 3 S21: -0.2085 S22: -0.0967 S23: -0.1414 REMARK 3 S31: 0.2027 S32: 0.1204 S33: 0.0886 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 427 THROUGH 445 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5602 -23.7075 -14.9635 REMARK 3 T TENSOR REMARK 3 T11: 0.2879 T22: 0.2299 REMARK 3 T33: 0.2721 T12: 0.0385 REMARK 3 T13: 0.0542 T23: -0.0144 REMARK 3 L TENSOR REMARK 3 L11: 9.5379 L22: 8.7922 REMARK 3 L33: 2.0382 L12: -9.0299 REMARK 3 L13: -2.9086 L23: 3.2777 REMARK 3 S TENSOR REMARK 3 S11: -0.2340 S12: 0.1646 S13: -0.8560 REMARK 3 S21: 0.5173 S22: -0.0762 S23: 0.8601 REMARK 3 S31: 0.2958 S32: -0.0469 S33: 0.3434 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JMQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000220883. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46366 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.790 REMARK 200 RESOLUTION RANGE LOW (A) : 44.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.11300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 1.95700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5FUB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG6000, 100MM CACL2, 100MM HEPES REMARK 280 PH7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.07950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.07950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.85000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.34250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 32.85000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.34250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 66.07950 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.85000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 57.34250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 66.07950 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 32.85000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 57.34250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 676 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 917 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 921 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ALA A 3 REMARK 465 PRO A 4 REMARK 465 GLY A 5 REMARK 465 GLU A 6 REMARK 465 GLY A 7 REMARK 465 PRO A 8 REMARK 465 CYS A 9 REMARK 465 SER A 10 REMARK 465 GLU A 11 REMARK 465 SER A 12 REMARK 465 GLN A 13 REMARK 465 VAL A 14 REMARK 465 ILE A 15 REMARK 465 PRO A 16 REMARK 465 VAL A 17 REMARK 465 LEU A 18 REMARK 465 GLU A 19 REMARK 465 GLU A 20 REMARK 465 ASP A 21 REMARK 465 PRO A 22 REMARK 465 VAL A 23 REMARK 465 ASP A 24 REMARK 465 TYR A 25 REMARK 465 GLY A 26 REMARK 465 CYS A 27 REMARK 465 GLU A 28 REMARK 465 MET A 29 REMARK 465 GLN A 30 REMARK 465 LEU A 31 REMARK 465 LEU A 32 REMARK 465 GLN A 33 REMARK 465 ASP A 34 REMARK 465 GLY A 35 REMARK 465 ALA A 36 REMARK 465 GLN A 37 REMARK 465 LEU A 38 REMARK 465 GLN A 39 REMARK 465 LEU A 40 REMARK 465 GLN A 41 REMARK 465 LEU A 42 REMARK 465 GLN A 43 REMARK 465 PRO A 44 REMARK 465 GLU A 45 REMARK 465 GLU A 46 REMARK 465 PHE A 47 REMARK 465 VAL A 48 REMARK 465 ALA A 49 REMARK 465 ILE A 50 REMARK 465 ALA A 51 REMARK 465 ASP A 52 REMARK 465 TYR A 53 REMARK 465 THR A 54 REMARK 465 ALA A 55 REMARK 465 THR A 56 REMARK 465 ASP A 57 REMARK 465 GLU A 58 REMARK 465 THR A 59 REMARK 465 GLN A 60 REMARK 465 LEU A 61 REMARK 465 SER A 62 REMARK 465 PHE A 63 REMARK 465 LEU A 64 REMARK 465 ARG A 65 REMARK 465 GLY A 66 REMARK 465 GLU A 67 REMARK 465 LYS A 68 REMARK 465 ILE A 69 REMARK 465 LEU A 70 REMARK 465 ILE A 71 REMARK 465 LEU A 72 REMARK 465 ARG A 73 REMARK 465 GLN A 74 REMARK 465 THR A 75 REMARK 465 THR A 76 REMARK 465 ALA A 77 REMARK 465 ASP A 78 REMARK 465 TRP A 79 REMARK 465 TRP A 80 REMARK 465 TRP A 81 REMARK 465 GLY A 82 REMARK 465 GLU A 83 REMARK 465 ARG A 84 REMARK 465 ALA A 85 REMARK 465 GLY A 86 REMARK 465 CYS A 87 REMARK 465 CYS A 88 REMARK 465 GLY A 89 REMARK 465 TYR A 90 REMARK 465 ILE A 91 REMARK 465 PRO A 92 REMARK 465 ALA A 93 REMARK 465 ASN A 94 REMARK 465 HIS A 95 REMARK 465 LEU A 96 REMARK 465 GLY A 97 REMARK 465 LYS A 98 REMARK 465 GLN A 99 REMARK 465 LEU A 100 REMARK 465 GLU A 101 REMARK 465 GLU A 102 REMARK 465 TYR A 103 REMARK 465 ASP A 104 REMARK 465 PRO A 105 REMARK 465 GLU A 106 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 618 O HOH A 643 1.85 REMARK 500 OE2 GLU A 215 O HOH A 601 1.88 REMARK 500 O HOH A 779 O HOH A 893 2.05 REMARK 500 O HOH A 835 O HOH A 876 2.07 REMARK 500 O HOH A 673 O HOH A 884 2.07 REMARK 500 O HOH A 664 O HOH A 862 2.08 REMARK 500 OE1 GLN A 143 O HOH A 602 2.16 REMARK 500 O HOH A 767 O HOH A 890 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 899 O HOH A 916 3454 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 229 -53.71 72.66 REMARK 500 GLU A 232 -27.43 88.94 REMARK 500 ALA A 266 58.19 -151.28 REMARK 500 VAL A 274 -59.36 -121.45 REMARK 500 LYS A 383 -136.07 46.56 REMARK 500 VAL A 412 -60.04 -101.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 921 DISTANCE = 5.82 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 506 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 196 O REMARK 620 2 ASP A 199 OD1 84.2 REMARK 620 3 ASP A 199 OD2 139.4 57.0 REMARK 620 4 HOH A 686 O 101.5 85.3 88.0 REMARK 620 5 HOH A 773 O 69.4 144.2 150.4 77.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6LC A 508 DBREF 5JMQ A 1 445 UNP Q3UKX1 Q3UKX1_MOUSE 1 445 SEQADV 5JMQ GLY A 0 UNP Q3UKX1 EXPRESSION TAG SEQADV 5JMQ TRP A 445 UNP Q3UKX1 ARG 445 ENGINEERED MUTATION SEQRES 1 A 446 GLY MET GLU ALA PRO GLY GLU GLY PRO CYS SER GLU SER SEQRES 2 A 446 GLN VAL ILE PRO VAL LEU GLU GLU ASP PRO VAL ASP TYR SEQRES 3 A 446 GLY CYS GLU MET GLN LEU LEU GLN ASP GLY ALA GLN LEU SEQRES 4 A 446 GLN LEU GLN LEU GLN PRO GLU GLU PHE VAL ALA ILE ALA SEQRES 5 A 446 ASP TYR THR ALA THR ASP GLU THR GLN LEU SER PHE LEU SEQRES 6 A 446 ARG GLY GLU LYS ILE LEU ILE LEU ARG GLN THR THR ALA SEQRES 7 A 446 ASP TRP TRP TRP GLY GLU ARG ALA GLY CYS CYS GLY TYR SEQRES 8 A 446 ILE PRO ALA ASN HIS LEU GLY LYS GLN LEU GLU GLU TYR SEQRES 9 A 446 ASP PRO GLU ASP THR TRP GLN ASP GLU GLU TYR PHE ASP SEQRES 10 A 446 SER TYR GLY THR LEU LYS LEU HIS LEU GLU MET LEU ALA SEQRES 11 A 446 ASP GLN PRO ARG THR THR LYS TYR HIS SER VAL ILE LEU SEQRES 12 A 446 GLN ASN LYS GLU SER LEU LYS ASP LYS VAL ILE LEU ASP SEQRES 13 A 446 VAL GLY CYS GLY THR GLY ILE ILE SER LEU PHE CYS ALA SEQRES 14 A 446 HIS HIS ALA ARG PRO LYS ALA VAL TYR ALA VAL GLU ALA SEQRES 15 A 446 SER ASP MET ALA GLN HIS THR SER GLN LEU VAL LEU GLN SEQRES 16 A 446 ASN GLY PHE ALA ASP THR ILE THR VAL PHE GLN GLN LYS SEQRES 17 A 446 VAL GLU ASP VAL VAL LEU PRO GLU LYS VAL ASP VAL LEU SEQRES 18 A 446 VAL SER GLU TRP MET GLY THR CYS LEU LEU PHE GLU PHE SEQRES 19 A 446 MET ILE GLU SER ILE LEU TYR ALA ARG ASP THR TRP LEU SEQRES 20 A 446 LYS GLY ASP GLY ILE ILE TRP PRO THR THR ALA ALA LEU SEQRES 21 A 446 HIS LEU VAL PRO CYS SER ALA GLU LYS ASP TYR HIS SER SEQRES 22 A 446 LYS VAL LEU PHE TRP ASP ASN ALA TYR GLU PHE ASN LEU SEQRES 23 A 446 SER ALA LEU LYS SER LEU ALA ILE LYS GLU PHE PHE SER SEQRES 24 A 446 ARG PRO LYS SER ASN HIS ILE LEU LYS PRO GLU ASP CYS SEQRES 25 A 446 LEU SER GLU PRO CYS THR ILE LEU GLN LEU ASP MET ARG SEQRES 26 A 446 THR VAL GLN VAL PRO ASP LEU GLU THR MET ARG GLY GLU SEQRES 27 A 446 LEU ARG PHE ASP ILE GLN LYS ALA GLY THR LEU HIS GLY SEQRES 28 A 446 PHE THR ALA TRP PHE SER VAL TYR PHE GLN SER LEU GLU SEQRES 29 A 446 GLU GLY GLN PRO GLN GLN VAL LEU SER THR GLY PRO LEU SEQRES 30 A 446 HIS PRO THR THR HIS TRP LYS GLN THR LEU PHE MET MET SEQRES 31 A 446 ASP ASP PRO VAL PRO VAL HIS THR GLY ASP VAL VAL THR SEQRES 32 A 446 GLY SER VAL VAL LEU GLN ARG ASN PRO VAL TRP ARG ARG SEQRES 33 A 446 HIS MET SER VAL SER LEU SER TRP VAL VAL THR SER ALA SEQRES 34 A 446 LEU ASP PRO THR SER GLN ARG VAL GLY GLU LYS VAL PHE SEQRES 35 A 446 PRO ILE TRP TRP HET PG4 A 501 13 HET EDO A 502 4 HET EDO A 503 4 HET EDO A 504 4 HET EDO A 505 4 HET CA A 506 1 HET CL A 507 1 HET 6LC A 508 24 HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM EDO 1,2-ETHANEDIOL HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETNAM 6LC 9-[(5E)-7-CARBAMIMIDAMIDO-5,6,7-TRIDEOXY-BETA-D-RIBO- HETNAM 2 6LC HEPT-5-ENOFURANOSYL]-9H-PURIN-6-AMINE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 PG4 C8 H18 O5 FORMUL 3 EDO 4(C2 H6 O2) FORMUL 7 CA CA 2+ FORMUL 8 CL CL 1- FORMUL 9 6LC C13 H18 N8 O3 FORMUL 10 HOH *321(H2 O) HELIX 1 AA1 GLN A 110 TYR A 118 1 9 HELIX 2 AA2 LEU A 121 ALA A 129 1 9 HELIX 3 AA3 ASP A 130 ASN A 144 1 15 HELIX 4 AA4 GLY A 161 ALA A 171 1 11 HELIX 5 AA5 ASP A 183 ASN A 195 1 13 HELIX 6 AA6 MET A 234 TRP A 245 1 12 HELIX 7 AA7 ALA A 266 VAL A 274 1 9 HELIX 8 AA8 LEU A 275 ALA A 280 5 6 HELIX 9 AA9 LEU A 285 ALA A 287 5 3 HELIX 10 AB1 LEU A 288 SER A 298 1 11 HELIX 11 AB2 LYS A 307 CYS A 311 5 5 HELIX 12 AB3 GLN A 327 LEU A 331 5 5 SHEET 1 AA1 5 ILE A 201 PHE A 204 0 SHEET 2 AA1 5 ALA A 175 VAL A 179 1 N ALA A 178 O THR A 202 SHEET 3 AA1 5 VAL A 152 VAL A 156 1 N ILE A 153 O TYR A 177 SHEET 4 AA1 5 VAL A 217 SER A 222 1 O VAL A 219 N LEU A 154 SHEET 5 AA1 5 LEU A 246 TRP A 253 1 O TRP A 253 N LEU A 220 SHEET 1 AA2 5 LYS A 301 HIS A 304 0 SHEET 2 AA2 5 GLN A 384 VAL A 395 -1 O LEU A 386 N LYS A 301 SHEET 3 AA2 5 GLY A 346 PHE A 359 -1 N PHE A 351 O PHE A 387 SHEET 4 AA2 5 THR A 256 CYS A 264 -1 N HIS A 260 O TRP A 354 SHEET 5 AA2 5 CYS A 316 ASP A 322 -1 O LEU A 321 N ALA A 257 SHEET 1 AA3 4 LYS A 301 HIS A 304 0 SHEET 2 AA3 4 GLN A 384 VAL A 395 -1 O LEU A 386 N LYS A 301 SHEET 3 AA3 4 GLY A 346 PHE A 359 -1 N PHE A 351 O PHE A 387 SHEET 4 AA3 4 GLN A 369 SER A 372 -1 O GLN A 369 N PHE A 359 SHEET 1 AA4 4 THR A 333 ASP A 341 0 SHEET 2 AA4 4 VAL A 400 ARG A 409 -1 O LEU A 407 N MET A 334 SHEET 3 AA4 4 MET A 417 THR A 426 -1 O SER A 420 N VAL A 406 SHEET 4 AA4 4 GLN A 434 ILE A 443 -1 O ILE A 443 N MET A 417 LINK O GLY A 196 CA CA A 506 1555 1555 2.57 LINK OD1 ASP A 199 CA CA A 506 1555 1555 2.32 LINK OD2 ASP A 199 CA CA A 506 1555 1555 2.30 LINK CA CA A 506 O HOH A 686 1555 1555 2.62 LINK CA CA A 506 O HOH A 773 1555 1555 2.52 CISPEP 1 TRP A 253 PRO A 254 0 -4.17 CISPEP 2 ILE A 443 TRP A 444 0 0.16 SITE 1 AC1 4 LYS A 151 ASP A 218 ASP A 249 LEU A 362 SITE 1 AC2 1 HIS A 377 SITE 1 AC3 5 GLN A 110 TYR A 114 GLU A 232 ARG A 415 SITE 2 AC3 5 EDO A 505 SITE 1 AC4 1 ARG A 299 SITE 1 AC5 5 GLN A 110 GLU A 113 HIS A 416 TRP A 445 SITE 2 AC5 5 EDO A 503 SITE 1 AC6 4 GLY A 196 ASP A 199 HOH A 686 HOH A 773 SITE 1 AC7 5 GLY A 374 PRO A 375 LEU A 376 HIS A 377 SITE 2 AC7 5 HOH A 918 SITE 1 AC8 18 PHE A 115 TYR A 118 HIS A 124 MET A 127 SITE 2 AC8 18 GLY A 157 GLU A 180 ALA A 181 GLN A 206 SITE 3 AC8 18 LYS A 207 VAL A 208 GLU A 209 GLU A 223 SITE 4 AC8 18 MET A 225 MET A 234 SER A 237 HIS A 381 SITE 5 AC8 18 TRP A 382 HOH A 749 CRYST1 65.700 114.685 132.159 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015221 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008720 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007567 0.00000