data_5JPL # _entry.id 5JPL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5JPL pdb_00005jpl 10.2210/pdb5jpl/pdb WWPDB D_1000220962 ? ? BMRB 30073 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details . _pdbx_database_related.db_id 30073 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5JPL _pdbx_database_status.recvd_initial_deposition_date 2016-05-03 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tietz, J.I.' 1 'Schwalen, C.J.' 2 'Blair, P.M.' 3 'Zakai, U.I.' 4 'Mitchell, D.A.' 5 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat. Chem. Biol.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1552-4469 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 13 _citation.language ? _citation.page_first 470 _citation.page_last 478 _citation.title 'A new genome-mining tool redefines the lasso peptide biosynthetic landscape.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/nchembio.2319 _citation.pdbx_database_id_PubMed 28244986 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tietz, J.I.' 1 ? primary 'Schwalen, C.J.' 2 ? primary 'Patel, P.S.' 3 ? primary 'Maxson, T.' 4 ? primary 'Blair, P.M.' 5 ? primary 'Tai, H.C.' 6 ? primary 'Zakai, U.I.' 7 ? primary 'Mitchell, D.A.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description 'Uncharacterized protein' _entity.formula_weight 2027.247 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'residues 30-46' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GRPNWGFENDWSCVRVC _entity_poly.pdbx_seq_one_letter_code_can GRPNWGFENDWSCVRVC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ARG n 1 3 PRO n 1 4 ASN n 1 5 TRP n 1 6 GLY n 1 7 PHE n 1 8 GLU n 1 9 ASN n 1 10 ASP n 1 11 TRP n 1 12 SER n 1 13 CYS n 1 14 VAL n 1 15 ARG n 1 16 VAL n 1 17 CYS n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 17 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Nocardiopsis alba (strain ATCC BAA-2165 / BE74)' _entity_src_nat.pdbx_ncbi_taxonomy_id 1205910 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain 'ATCC BAA-2165 / BE74' _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details 'USDA-ARS NRRL Collection' _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code J7LF03_NOCAA _struct_ref.pdbx_db_accession J7LF03 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code GRPNWGFENDWSCVRVC _struct_ref.pdbx_align_begin 30 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5JPL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 17 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession J7LF03 _struct_ref_seq.db_align_beg 30 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 46 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 17 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 1H 1 anisotropic 2 1 1 '2D 1H-1H NOESY' 1 anisotropic 3 1 1 '2D 1H-13C HSQC aliphatic' 1 anisotropic 4 1 1 '2D 1H-13C HSQC aromatic' 1 anisotropic 5 1 1 '2D 1H-1H TOCSY' 1 anisotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7 _pdbx_nmr_exptl_sample_conditions.ionic_strength 1 _pdbx_nmr_exptl_sample_conditions.details 'room temperature' _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.label conditions _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '5 mM LP2006, methanol' _pdbx_nmr_sample_details.solvent_system methanol _pdbx_nmr_sample_details.label CD3OH_sample _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details 'Natural product dissolved in CD3OH.' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 900 _pdbx_nmr_spectrometer.details 'inverse 5 mm TCI cryogenic probe with z-axis pulsed field gradient (pfg) capability' # _pdbx_nmr_refine.entry_id 5JPL _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 5JPL _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5JPL _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement XPLOR-NIH 2.36 'Charles Schwieters, Marius Clore (NIH)' 2 collection TopSpin 1.3 'Bruker Biospin' 3 'chemical shift assignment' MestReNova 8.1.1 'Mestrelab Research' 4 'peak picking' Sparky ? Goddard 5 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 6 'structure calculation' XPLOR-NIH 2.36 'Charles Schwieters, Marius Clore (NIH)' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5JPL _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5JPL _struct.title 'LP2006, a handcuff-topology lasso peptide antibiotic' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5JPL _struct_keywords.text 'lasso peptide, RiPP, antibiotic macrocyclic, ANTIBIOTIC' _struct_keywords.pdbx_keywords ANTIBIOTIC # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id PHE _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 7 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ASP _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 10 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id PHE _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 7 _struct_conf.end_auth_comp_id ASP _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 10 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 13 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 17 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 13 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 17 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.018 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ARG A 2 ? PRO A 3 ? ARG A 2 PRO A 3 AA1 2 SER A 12 ? CYS A 13 ? SER A 12 CYS A 13 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ARG _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 2 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ARG _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 2 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id CYS _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 13 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id CYS _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 13 # _atom_sites.entry_id 5JPL _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 ASN 4 4 4 ASN ASN A . n A 1 5 TRP 5 5 5 TRP TRP A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 PHE 7 7 7 PHE PHE A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 TRP 11 11 11 TRP TRP A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 CYS 13 13 13 CYS CYS A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 CYS 17 17 17 CYS CYS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 1730 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-03-01 2 'Structure model' 1 1 2017-03-15 3 'Structure model' 1 2 2017-04-26 4 'Structure model' 2 0 2022-11-30 5 'Structure model' 2 1 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Atomic model' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' 8 5 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' database_2 3 4 'Structure model' pdbx_nmr_software 4 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 5 4 'Structure model' pdbx_validate_close_contact 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_conn_type 8 5 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.auth_atom_id' 2 4 'Structure model' '_atom_site.label_atom_id' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_pdbx_nmr_software.name' 6 5 'Structure model' '_pdbx_database_status.status_code_nmr_data' # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component LP2006 _pdbx_nmr_exptl_sample.concentration 5 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling none # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N A GLY 1 ? ? CD A GLU 8 ? ? 1.33 2 2 HD21 A ASN 9 ? ? H A TRP 11 ? ? 1.25 3 2 N A GLY 1 ? ? CD A GLU 8 ? ? 1.33 4 3 N A GLY 1 ? ? CD A GLU 8 ? ? 1.33 5 4 HD21 A ASN 9 ? ? H A TRP 11 ? ? 1.22 6 4 N A GLY 1 ? ? CD A GLU 8 ? ? 1.34 7 5 N A GLY 1 ? ? CD A GLU 8 ? ? 1.34 8 6 N A GLY 1 ? ? CD A GLU 8 ? ? 1.34 9 7 N A GLY 1 ? ? CD A GLU 8 ? ? 1.34 10 8 N A GLY 1 ? ? CD A GLU 8 ? ? 1.34 11 8 H1 A GLY 1 ? ? OG A SER 12 ? ? 1.56 12 9 HD21 A ASN 9 ? ? H A TRP 11 ? ? 1.28 13 9 N A GLY 1 ? ? CD A GLU 8 ? ? 1.33 14 10 N A GLY 1 ? ? CD A GLU 8 ? ? 1.33 15 11 HD21 A ASN 9 ? ? H A TRP 11 ? ? 1.25 16 11 N A GLY 1 ? ? CD A GLU 8 ? ? 1.34 17 12 N A GLY 1 ? ? CD A GLU 8 ? ? 1.34 18 13 N A GLY 1 ? ? CD A GLU 8 ? ? 1.34 19 14 HD21 A ASN 9 ? ? H A TRP 11 ? ? 1.23 20 14 N A GLY 1 ? ? CD A GLU 8 ? ? 1.33 21 15 N A GLY 1 ? ? CD A GLU 8 ? ? 1.33 22 16 N A GLY 1 ? ? CD A GLU 8 ? ? 1.34 23 17 N A GLY 1 ? ? CD A GLU 8 ? ? 1.34 24 18 HD21 A ASN 9 ? ? H A TRP 11 ? ? 1.28 25 18 HD22 A ASN 9 ? ? HG A SER 12 ? ? 1.30 26 18 N A GLY 1 ? ? CD A GLU 8 ? ? 1.34 27 19 N A GLY 1 ? ? CD A GLU 8 ? ? 1.33 28 20 HD21 A ASN 9 ? ? H A TRP 11 ? ? 1.25 29 20 N A GLY 1 ? ? CD A GLU 8 ? ? 1.33 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 4 ? ? 175.62 21.30 2 1 PHE A 7 ? ? -136.75 -41.84 3 1 ASN A 9 ? ? 40.07 15.35 4 1 VAL A 16 ? ? 55.45 -86.49 5 2 PRO A 3 ? ? -45.36 83.35 6 2 ASN A 4 ? ? -172.69 34.01 7 2 TRP A 5 ? ? 53.55 107.22 8 2 ASN A 9 ? ? 41.82 17.59 9 2 ASP A 10 ? ? 48.87 11.90 10 3 ARG A 2 ? ? -38.71 102.04 11 3 PRO A 3 ? ? -45.41 100.20 12 3 ASN A 4 ? ? -172.89 23.92 13 3 TRP A 5 ? ? 51.50 104.22 14 3 ASN A 9 ? ? 42.06 16.06 15 3 ASP A 10 ? ? 47.06 22.85 16 3 TRP A 11 ? ? -144.50 10.38 17 3 ARG A 15 ? ? -142.53 -72.06 18 4 ARG A 2 ? ? -174.94 104.09 19 4 PRO A 3 ? ? -44.53 86.03 20 4 ASN A 4 ? ? -159.62 28.58 21 4 TRP A 5 ? ? 47.63 91.20 22 4 ASN A 9 ? ? 41.80 13.88 23 4 ASP A 10 ? ? 54.46 0.00 24 4 VAL A 14 ? ? -90.97 -156.92 25 5 PRO A 3 ? ? -64.98 99.85 26 5 ASN A 4 ? ? -174.98 -128.77 27 5 TRP A 5 ? ? -161.48 99.72 28 5 ASN A 9 ? ? 46.70 12.53 29 5 ASP A 10 ? ? 43.07 19.32 30 5 TRP A 11 ? ? -154.79 19.15 31 5 ARG A 15 ? ? -140.77 -84.87 32 6 PRO A 3 ? ? -45.26 85.96 33 6 ASN A 4 ? ? -160.55 32.58 34 6 TRP A 5 ? ? 54.26 96.26 35 6 PHE A 7 ? ? -80.35 -79.82 36 6 GLU A 8 ? ? -48.33 161.57 37 6 ASN A 9 ? ? 55.61 7.66 38 6 ASP A 10 ? ? 57.83 9.90 39 6 TRP A 11 ? ? -160.16 29.71 40 7 ASN A 4 ? ? 76.10 155.58 41 7 PHE A 7 ? ? -87.07 -83.74 42 7 GLU A 8 ? ? -44.02 159.81 43 7 ASN A 9 ? ? 53.88 12.20 44 7 ASP A 10 ? ? 57.57 7.91 45 7 TRP A 11 ? ? -159.34 35.65 46 7 VAL A 14 ? ? -67.55 -143.52 47 8 ASN A 4 ? ? 83.36 114.40 48 8 TRP A 5 ? ? -37.82 120.94 49 8 PHE A 7 ? ? -80.82 -73.73 50 8 GLU A 8 ? ? -49.41 152.78 51 8 ASN A 9 ? ? 54.24 8.82 52 8 ASP A 10 ? ? 55.75 5.09 53 8 TRP A 11 ? ? -142.66 21.23 54 8 ARG A 15 ? ? -145.03 -65.07 55 9 PRO A 3 ? ? -41.12 172.70 56 9 ASN A 4 ? ? 58.30 121.58 57 9 ASN A 9 ? ? 40.98 17.63 58 9 ASP A 10 ? ? 46.25 15.40 59 9 ARG A 15 ? ? -167.68 -51.31 60 10 TRP A 5 ? ? -32.89 141.06 61 10 ASN A 9 ? ? 46.38 18.46 62 10 ASP A 10 ? ? 51.45 11.65 63 10 TRP A 11 ? ? -159.45 37.60 64 11 PRO A 3 ? ? -40.55 179.26 65 11 ASN A 4 ? ? 79.20 98.22 66 11 TRP A 5 ? ? -35.53 121.94 67 11 PHE A 7 ? ? -93.64 -68.08 68 11 ASN A 9 ? ? 41.31 18.82 69 11 ASP A 10 ? ? 45.84 13.31 70 11 VAL A 14 ? ? -97.26 -118.79 71 12 PRO A 3 ? ? -54.20 -162.20 72 12 ASN A 4 ? ? 60.41 113.16 73 12 PHE A 7 ? ? -90.97 -70.80 74 12 GLU A 8 ? ? -49.67 150.92 75 12 ASN A 9 ? ? 55.57 6.20 76 12 TRP A 11 ? ? -146.86 26.85 77 13 ASN A 4 ? ? 90.13 110.21 78 13 ASN A 9 ? ? 56.33 5.22 79 13 ASP A 10 ? ? 62.19 -0.12 80 13 VAL A 14 ? ? -77.06 -92.18 81 14 ASN A 4 ? ? -173.72 17.26 82 14 PHE A 7 ? ? -154.10 -19.25 83 14 GLU A 8 ? ? -59.10 -103.09 84 14 ASN A 9 ? ? -70.18 38.80 85 14 ASP A 10 ? ? 43.79 21.72 86 14 TRP A 11 ? ? -152.06 8.44 87 15 ASN A 4 ? ? -174.41 -121.15 88 15 TRP A 5 ? ? -175.64 102.53 89 15 PHE A 7 ? ? -159.68 -60.48 90 15 ASN A 9 ? ? 53.61 8.64 91 15 TRP A 11 ? ? -157.42 9.96 92 15 ARG A 15 ? ? 42.94 -129.26 93 16 ASN A 4 ? ? -155.50 25.99 94 16 TRP A 5 ? ? 47.57 98.53 95 16 ASN A 9 ? ? 55.03 6.74 96 16 ASP A 10 ? ? 57.88 2.75 97 16 ARG A 15 ? ? -157.48 -38.07 98 17 ASN A 4 ? ? -64.59 -169.39 99 17 PHE A 7 ? ? -99.23 -67.56 100 17 GLU A 8 ? ? -53.84 176.34 101 17 ASN A 9 ? ? 48.43 16.20 102 17 ASP A 10 ? ? 69.56 -10.04 103 17 TRP A 11 ? ? -166.43 73.14 104 17 SER A 12 ? ? -171.28 144.87 105 18 PRO A 3 ? ? -42.06 98.70 106 18 ASN A 4 ? ? -173.00 31.17 107 18 TRP A 5 ? ? 44.02 88.63 108 18 PHE A 7 ? ? -94.33 -66.20 109 18 ASN A 9 ? ? 43.14 15.57 110 18 ASP A 10 ? ? 46.65 14.46 111 18 VAL A 14 ? ? -71.08 -96.32 112 18 VAL A 16 ? ? 53.53 107.88 113 19 PRO A 3 ? ? -70.12 25.46 114 19 TRP A 5 ? ? -25.37 125.37 115 19 ASN A 9 ? ? 41.62 16.61 116 19 ASP A 10 ? ? 49.41 17.57 117 19 TRP A 11 ? ? -140.26 10.77 118 19 VAL A 14 ? ? -72.00 -123.20 119 20 ARG A 2 ? ? -38.38 102.63 120 20 PRO A 3 ? ? -46.00 102.35 121 20 ASN A 4 ? ? -179.83 23.61 122 20 TRP A 5 ? ? 48.52 106.36 123 20 PHE A 7 ? ? -146.67 -35.76 124 20 GLU A 8 ? ? -47.09 -105.65 125 20 ASN A 9 ? ? -75.17 29.36 126 20 ASP A 10 ? ? 56.33 -1.06 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 2 2 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 3 3 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 4 4 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 5 5 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 6 6 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 7 7 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 8 8 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 9 9 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 10 10 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 11 11 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 12 12 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 13 13 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 14 14 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 15 15 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 16 16 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 17 17 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 18 18 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 19 19 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 20 20 Y 1 A GLU 8 ? OE2 ? A GLU 8 OE2 #