HEADER DNA BINDING PROTEIN 06-MAY-16 5JRJ TITLE CRYSTAL STRUCTURE OF HERBASPIRILLUM SEROPEDICAE RECA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN RECA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RECOMBINASE A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HERBASPIRILLUM SEROPEDICAE; SOURCE 3 ORGANISM_TAXID: 964; SOURCE 4 STRAIN: SMR1; SOURCE 5 CELL: PROTEOBACTERIA; SOURCE 6 GENE: RECA; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: STL2669 KEYWDS DNA-BINDING PROTEIN, ATP-DEPENDENT DNA PROTEIN, ATPASE ACTIVITY, DNA KEYWDS 2 STRAND EXCHANGE, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR W.C.LEITE,C.W.GALVAO,S.C.SAAB,J.IULEK,R.M.ETTO,M.B.R.STEFFENS, AUTHOR 2 S.CHITTENI-PATTU,T.STANAGE,J.L.KECK,M.M.COX REVDAT 5 27-SEP-23 5JRJ 1 LINK REVDAT 4 25-DEC-19 5JRJ 1 REMARK REVDAT 3 25-APR-18 5JRJ 1 JRNL REVDAT 2 13-SEP-17 5JRJ 1 REMARK REVDAT 1 03-AUG-16 5JRJ 0 JRNL AUTH W.C.LEITE,C.W.GALVAO,S.C.SAAB,J.IULEK,R.M.ETTO,M.B.STEFFENS, JRNL AUTH 2 S.CHITTENI-PATTU,T.STANAGE,J.L.KECK,M.M.COX JRNL TITL STRUCTURAL AND FUNCTIONAL STUDIES OF H. SEROPEDICAE RECA JRNL TITL 2 PROTEIN - INSIGHTS INTO THE POLYMERIZATION OF RECA PROTEIN JRNL TITL 3 AS NUCLEOPROTEIN FILAMENT. JRNL REF PLOS ONE V. 11 59871 2016 JRNL REFN ESSN 1932-6203 JRNL PMID 27447485 JRNL DOI 10.1371/JOURNAL.PONE.0159871 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 42571 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.750 REMARK 3 FREE R VALUE TEST SET COUNT : 2024 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.5835 - 4.0935 1.00 3016 150 0.1584 0.1855 REMARK 3 2 4.0935 - 3.2502 1.00 2971 148 0.1515 0.1898 REMARK 3 3 3.2502 - 2.8396 1.00 2985 147 0.1642 0.1875 REMARK 3 4 2.8396 - 2.5801 1.00 2949 149 0.1726 0.1990 REMARK 3 5 2.5801 - 2.3953 1.00 2966 150 0.1796 0.2031 REMARK 3 6 2.3953 - 2.2541 1.00 2962 147 0.1690 0.2267 REMARK 3 7 2.2541 - 2.1412 1.00 2945 143 0.1711 0.2236 REMARK 3 8 2.1412 - 2.0480 1.00 2963 144 0.1823 0.2219 REMARK 3 9 2.0480 - 1.9692 1.00 2958 150 0.1837 0.2155 REMARK 3 10 1.9692 - 1.9013 1.00 2935 150 0.1854 0.2251 REMARK 3 11 1.9013 - 1.8418 1.00 2954 148 0.1989 0.2337 REMARK 3 12 1.8418 - 1.7892 1.00 2959 149 0.2249 0.2641 REMARK 3 13 1.7892 - 1.7421 0.92 2732 140 0.2670 0.3023 REMARK 3 14 1.7421 - 1.6996 0.76 2252 109 0.3348 0.4200 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.40 REMARK 3 SHRINKAGE RADIUS : 1.30 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.94 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 2453 REMARK 3 ANGLE : 1.621 3326 REMARK 3 CHIRALITY : 0.089 384 REMARK 3 PLANARITY : 0.007 423 REMARK 3 DIHEDRAL : 15.553 947 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A OR ( CHAIN A AND RESID 401 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.1732 42.2210 42.1896 REMARK 3 T TENSOR REMARK 3 T11: 0.1007 T22: 0.1118 REMARK 3 T33: 0.1049 T12: 0.0138 REMARK 3 T13: -0.0012 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 0.5930 L22: 0.2343 REMARK 3 L33: 0.1438 L12: -0.0706 REMARK 3 L13: 0.2769 L23: -0.1199 REMARK 3 S TENSOR REMARK 3 S11: -0.0415 S12: 0.0115 S13: 0.0712 REMARK 3 S21: -0.0202 S22: -0.0013 S23: -0.0108 REMARK 3 S31: -0.0467 S32: 0.0006 S33: -0.0319 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JRJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000220839. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER SMART 6000 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PROTEUM PLUS VERSION 2010.5 REMARK 200 DATA SCALING SOFTWARE : PROTEUM PLUS VERSION 2010.5 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42574 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 31.578 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 5.180 REMARK 200 R MERGE (I) : 0.04670 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.0300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.5 REMARK 200 DATA REDUNDANCY IN SHELL : 1.83 REMARK 200 R MERGE FOR SHELL (I) : 0.62850 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.080 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER PHASER-2.6.0 REMARK 200 STARTING MODEL: 1XMV REMARK 200 REMARK 200 REMARK: RODLIKE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SINGLE CRYSTALS WERE OBTAINED WITH REMARK 280 0.25 M CACL2 AND 14% W/V PEG 3350 WITH ADDITION OF POLYPROPYLENE REMARK 280 GLYCOL P 400 (PPG 400) ONTO THE DROP TO GIVE A FINAL REMARK 280 CONCENTRATION OF 5-8% W/V., PH 6.8, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.45100 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 60.90200 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 45.67650 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 76.12750 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 15.22550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 HELICAL SYMMETRY WITH THE FOLLOWING PARAMETERS: REMARK 300 ROTATION PER SUBUNIT (TWIST) = 0.00 DEGREES REMARK 300 RISE PER SUBUNIT (HEIGHT) = 0.00 ANGSTROMS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 30.45100 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 60.90200 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 45.67650 REMARK 350 BIOMT1 5 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 76.12750 REMARK 350 BIOMT1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 15.22550 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 ASP A 3 REMARK 465 LYS A 4 REMARK 465 LYS A 5 REMARK 465 ALA A 41 REMARK 465 GLU A 42 REMARK 465 GLU A 43 REMARK 465 GLY A 164 REMARK 465 ASP A 165 REMARK 465 MET A 166 REMARK 465 GLY A 167 REMARK 465 ASP A 168 REMARK 465 SER A 169 REMARK 465 LEU A 170 REMARK 465 PRO A 171 REMARK 465 GLY A 172 REMARK 465 LEU A 173 REMARK 465 GLN A 174 REMARK 465 ALA A 175 REMARK 465 ARG A 203 REMARK 465 MET A 204 REMARK 465 LYS A 205 REMARK 465 ILE A 206 REMARK 465 GLY A 207 REMARK 465 VAL A 208 REMARK 465 MET A 209 REMARK 465 PHE A 210 REMARK 465 GLY A 211 REMARK 465 ASN A 212 REMARK 465 PRO A 213 REMARK 465 GLU A 214 REMARK 465 THR A 215 REMARK 465 THR A 216 REMARK 465 THR A 217 REMARK 465 GLY A 218 REMARK 465 GLU A 343 REMARK 465 ALA A 344 REMARK 465 GLU A 345 REMARK 465 ALA A 346 REMARK 465 GLU A 347 REMARK 465 ALA A 348 REMARK 465 LYS A 349 REMARK 465 ALA A 350 REMARK 465 SER A 351 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 8 CG OD1 ND2 REMARK 470 LYS A 25 CE NZ REMARK 470 ILE A 44 CG1 CG2 CD1 REMARK 470 LYS A 92 CE NZ REMARK 470 GLU A 103 CD OE1 OE2 REMARK 470 ARG A 176 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 177 CG CD1 CD2 REMARK 470 GLN A 180 CD OE1 NE2 REMARK 470 LYS A 184 CE NZ REMARK 470 ASN A 220 CG OD1 ND2 REMARK 470 ARG A 234 NE CZ NH1 NH2 REMARK 470 LYS A 239 NZ REMARK 470 ASP A 242 CG OD1 OD2 REMARK 470 GLU A 243 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 774 O HOH A 805 1.95 REMARK 500 O2G ATP A 402 O HOH A 501 2.09 REMARK 500 O HOH A 781 O HOH A 805 2.09 REMARK 500 NE2 GLN A 22 OE1 GLN A 26 2.11 REMARK 500 O HOH A 641 O HOH A 805 2.14 REMARK 500 OG1 THR A 80 O2B ATP A 402 2.16 REMARK 500 O HOH A 708 O HOH A 756 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 262 9.86 83.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 119 OD1 REMARK 620 2 ASP A 120 OD1 89.2 REMARK 620 3 HOH A 528 O 72.6 79.4 REMARK 620 4 HOH A 588 O 76.3 67.5 134.4 REMARK 620 5 HOH A 746 O 85.5 125.8 146.8 58.8 REMARK 620 6 HOH A 750 O 177.8 88.6 106.9 102.9 95.9 REMARK 620 7 HOH A 759 O 93.0 151.7 74.4 140.2 82.5 88.9 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 403 DBREF 5JRJ A 1 351 UNP Q9F672 RECA_HERSE 1 351 SEQRES 1 A 351 MET ASP ASP LYS LYS ALA ALA ASN ASN SER GLU LYS SER SEQRES 2 A 351 LYS ALA LEU ALA ALA ALA LEU ALA GLN ILE GLU LYS GLN SEQRES 3 A 351 PHE GLY LYS GLY SER VAL MET ARG MET GLU ASP GLY VAL SEQRES 4 A 351 ILE ALA GLU GLU ILE GLN ALA VAL SER THR GLY SER LEU SEQRES 5 A 351 GLY LEU ASP ILE ALA LEU GLY ILE GLY GLY LEU PRO ARG SEQRES 6 A 351 GLY ARG VAL ILE GLU ILE TYR GLY PRO GLU SER SER GLY SEQRES 7 A 351 LYS THR THR LEU THR LEU GLN SER ILE ALA GLU MET GLN SEQRES 8 A 351 LYS LEU GLY GLY THR CYS ALA PHE ILE ASP ALA GLU HIS SEQRES 9 A 351 ALA LEU ASP VAL THR TYR ALA GLN LYS LEU GLY VAL ASN SEQRES 10 A 351 LEU ASN ASP LEU LEU ILE SER GLN PRO ASP THR GLY GLU SEQRES 11 A 351 GLN ALA LEU GLU ILE CYS ASP ALA LEU VAL ARG SER GLY SEQRES 12 A 351 ALA VAL ASP LEU ILE VAL VAL ASP SER VAL ALA ALA LEU SEQRES 13 A 351 THR PRO LYS ALA GLU ILE GLU GLY ASP MET GLY ASP SER SEQRES 14 A 351 LEU PRO GLY LEU GLN ALA ARG LEU MET SER GLN ALA LEU SEQRES 15 A 351 ARG LYS LEU THR GLY SER ILE ASN ARG THR ASN THR THR SEQRES 16 A 351 VAL ILE PHE ILE ASN GLN ILE ARG MET LYS ILE GLY VAL SEQRES 17 A 351 MET PHE GLY ASN PRO GLU THR THR THR GLY GLY ASN ALA SEQRES 18 A 351 LEU LYS PHE TYR ALA SER VAL ARG LEU ASP ILE ARG ARG SEQRES 19 A 351 THR GLY SER ILE LYS SER GLY ASP GLU VAL ILE GLY SER SEQRES 20 A 351 GLU THR LYS VAL LYS VAL VAL LYS ASN LYS VAL ALA PRO SEQRES 21 A 351 PRO PHE ARG GLU ALA HIS PHE ASP ILE LEU TYR GLY GLU SEQRES 22 A 351 GLY THR SER ARG GLU GLY GLU ILE LEU ASP LEU GLY SER SEQRES 23 A 351 GLU HIS LYS VAL VAL GLU LYS SER GLY ALA TRP TYR SER SEQRES 24 A 351 TYR ASN GLY GLU ARG ILE GLY GLN GLY LYS ASP ASN ALA SEQRES 25 A 351 ARG ASN TYR LEU LYS GLU HIS PRO GLU LEU ALA ARG GLU SEQRES 26 A 351 ILE GLU ASN LYS VAL ARG VAL ALA LEU GLY VAL PRO GLU SEQRES 27 A 351 LEU ALA GLY GLY GLU ALA GLU ALA GLU ALA LYS ALA SER HET ADP A 401 27 HET ATP A 402 31 HET CA A 403 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM CA CALCIUM ION FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 ATP C10 H16 N5 O13 P3 FORMUL 4 CA CA 2+ FORMUL 5 HOH *325(H2 O) HELIX 1 AA1 ALA A 6 GLY A 28 1 23 HELIX 2 AA2 SER A 51 LEU A 58 1 8 HELIX 3 AA3 GLY A 78 LEU A 93 1 16 HELIX 4 AA4 ASP A 107 LEU A 114 1 8 HELIX 5 AA5 ASN A 117 LEU A 121 5 5 HELIX 6 AA6 THR A 128 SER A 142 1 15 HELIX 7 AA7 PRO A 158 GLU A 163 1 6 HELIX 8 AA8 LEU A 177 ASN A 193 1 17 HELIX 9 AA9 ASN A 220 ALA A 226 1 7 HELIX 10 AB1 SER A 276 HIS A 288 1 13 HELIX 11 AB2 GLY A 308 HIS A 319 1 12 HELIX 12 AB3 HIS A 319 GLY A 335 1 17 SHEET 1 AA1 2 ALA A 46 VAL A 47 0 SHEET 2 AA1 2 LEU A 63 PRO A 64 -1 O LEU A 63 N VAL A 47 SHEET 1 AA2 9 LEU A 122 SER A 124 0 SHEET 2 AA2 9 CYS A 97 ASP A 101 1 N ASP A 101 O SER A 124 SHEET 3 AA2 9 LEU A 147 ASP A 151 1 O VAL A 149 N ILE A 100 SHEET 4 AA2 9 THR A 195 GLN A 201 1 O ILE A 197 N VAL A 150 SHEET 5 AA2 9 VAL A 68 GLY A 73 1 N ILE A 69 O PHE A 198 SHEET 6 AA2 9 VAL A 228 SER A 240 1 O LEU A 230 N TYR A 72 SHEET 7 AA2 9 GLU A 243 ASN A 256 -1 O GLU A 243 N SER A 240 SHEET 8 AA2 9 GLU A 264 LEU A 270 -1 O ILE A 269 N SER A 247 SHEET 9 AA2 9 GLY A 274 THR A 275 -1 O GLY A 274 N LEU A 270 SHEET 1 AA3 3 GLU A 292 SER A 294 0 SHEET 2 AA3 3 TRP A 297 TYR A 300 -1 O TRP A 297 N SER A 294 SHEET 3 AA3 3 GLU A 303 GLN A 307 -1 O ILE A 305 N TYR A 298 LINK OD1AASN A 119 CA CA A 403 1555 1555 2.32 LINK OD1 ASP A 120 CA CA A 403 1555 1555 2.36 LINK CA CA A 403 O HOH A 528 1555 6555 2.38 LINK CA CA A 403 O HOH A 588 1555 1555 2.93 LINK CA CA A 403 O HOH A 746 1555 1555 2.38 LINK CA CA A 403 O HOH A 750 1555 1555 2.27 LINK CA CA A 403 O HOH A 759 1555 6555 2.41 CISPEP 1 ASP A 151 SER A 152 0 18.29 SITE 1 AC1 21 PRO A 74 GLU A 75 SER A 76 SER A 77 SITE 2 AC1 21 GLY A 78 LYS A 79 THR A 80 THR A 81 SITE 3 AC1 21 ASP A 107 TYR A 110 ILE A 269 TYR A 271 SITE 4 AC1 21 GLY A 272 ATP A 402 HOH A 510 HOH A 519 SITE 5 AC1 21 HOH A 532 HOH A 534 HOH A 553 HOH A 559 SITE 6 AC1 21 HOH A 668 SITE 1 AC2 24 GLU A 75 SER A 76 SER A 77 GLY A 78 SITE 2 AC2 24 LYS A 79 THR A 80 THR A 81 ASP A 107 SITE 3 AC2 24 TYR A 110 GLN A 201 TYR A 271 GLY A 272 SITE 4 AC2 24 ADP A 401 HOH A 501 HOH A 510 HOH A 518 SITE 5 AC2 24 HOH A 519 HOH A 526 HOH A 532 HOH A 534 SITE 6 AC2 24 HOH A 553 HOH A 558 HOH A 559 HOH A 668 SITE 1 AC3 7 ASN A 119 ASP A 120 HOH A 528 HOH A 588 SITE 2 AC3 7 HOH A 746 HOH A 750 HOH A 759 CRYST1 87.410 87.410 91.353 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011440 0.006605 0.000000 0.00000 SCALE2 0.000000 0.013210 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010947 0.00000