HEADER PROTEIN BINDING 09-MAY-16 5JST TITLE MBP FUSED MDV1 COILED COIL COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALTOSE-BINDING PERIPLASMIC PROTEIN,MITOCHONDRIAL DIVISION COMPND 3 PROTEIN 1; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: UNP RESIDUES 27-392,UNP RESIDUES 230-300; COMPND 6 SYNONYM: MBP,MMBP,MALTODEXTRIN-BINDING PROTEIN,MITOCHONDRIA FISSION 2 COMPND 7 PROTEIN; COMPND 8 ENGINEERED: YES; COMPND 9 OTHER_DETAILS: THE FUSION PROTEIN OF MBP AND MDV1 (MITOCHONDRIAL COMPND 10 DIVISION PROTEIN 1) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI, SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 83333, 307796; SOURCE 5 STRAIN: K12, YJM789; SOURCE 6 GENE: MALE, B4034, JW3994, MDV1, FIS2, GAG3, NET2, SCY_3176; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MBP, COILED-COIL, SER, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR B.-W.KIM,H.K.SONG REVDAT 3 08-NOV-23 5JST 1 HETSYN REVDAT 2 29-JUL-20 5JST 1 COMPND REMARK HET HETNAM REVDAT 2 2 1 HETSYN FORMUL LINK SITE REVDAT 2 3 1 ATOM REVDAT 1 22-MAR-17 5JST 0 JRNL AUTH B.W.KIM,Y.O.JUNG,M.K.KIM,D.H.KWON,S.H.PARK,J.H.KIM,Y.B.KUK, JRNL AUTH 2 S.J.OH,L.KIM,B.H.KIM,W.S.YANG,H.K.SONG JRNL TITL ACCORD: AN ASSESSMENT TOOL TO DETERMINE THE ORIENTATION OF JRNL TITL 2 HOMODIMERIC COILED-COILS. JRNL REF SCI REP V. 7 43318 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 28266564 JRNL DOI 10.1038/SREP43318 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 50766 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.960 REMARK 3 FREE R VALUE TEST SET COUNT : 2011 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.8507 - 5.2947 0.91 3278 136 0.1804 0.2117 REMARK 3 2 5.2947 - 4.2045 0.98 3480 146 0.1706 0.2279 REMARK 3 3 4.2045 - 3.6736 1.00 3508 146 0.1972 0.2465 REMARK 3 4 3.6736 - 3.3380 1.00 3506 142 0.2309 0.2863 REMARK 3 5 3.3380 - 3.0988 1.00 3509 154 0.2621 0.3169 REMARK 3 6 3.0988 - 2.9162 1.00 3507 146 0.2844 0.3467 REMARK 3 7 2.9162 - 2.7702 1.00 3505 144 0.2806 0.3192 REMARK 3 8 2.7702 - 2.6497 1.00 3493 139 0.2758 0.2929 REMARK 3 9 2.6497 - 2.5477 1.00 3521 140 0.2825 0.3316 REMARK 3 10 2.5477 - 2.4598 1.00 3518 144 0.2862 0.3478 REMARK 3 11 2.4598 - 2.3829 1.00 3491 137 0.2881 0.3582 REMARK 3 12 2.3829 - 2.3148 1.00 3505 144 0.2914 0.3634 REMARK 3 13 2.3148 - 2.2539 1.00 3494 150 0.3022 0.3384 REMARK 3 14 2.2539 - 2.1989 0.99 3440 143 0.3300 0.3961 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6737 REMARK 3 ANGLE : 0.879 9169 REMARK 3 CHIRALITY : 0.055 1041 REMARK 3 PLANARITY : 0.006 1192 REMARK 3 DIHEDRAL : 11.487 4011 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 3484 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JST COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221163. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-MAY-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.25530 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50774 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.199 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.69700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3DM0, 2XU6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.3~1.7 M SODIUM FORMATE, 25% PEG REMARK 280 3350, 0.1 M CACL2, 0.1 M SODIUM ACETATE/ACETIC ACID, PH 4.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 64.25750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.47100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 64.25750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 51.47100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 LYS A 1 REMARK 465 ILE A 2 REMARK 465 GLU A 3 REMARK 465 ASP A 432 REMARK 465 ASP A 433 REMARK 465 ARG A 434 REMARK 465 LEU A 435 REMARK 465 ASP A 436 REMARK 465 PHE A 437 REMARK 465 LEU A 438 REMARK 465 GLU A 439 REMARK 465 GLU A 440 REMARK 465 TYR A 441 REMARK 465 GLY A 442 REMARK 465 MET B 0 REMARK 465 ASP B 433 REMARK 465 ARG B 434 REMARK 465 LEU B 435 REMARK 465 ASP B 436 REMARK 465 PHE B 437 REMARK 465 LEU B 438 REMARK 465 GLU B 439 REMARK 465 GLU B 440 REMARK 465 TYR B 441 REMARK 465 GLY B 442 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 6 CG CD CE NZ REMARK 470 LYS A 29 CG CD CE NZ REMARK 470 LYS A 34 CG CD CE NZ REMARK 470 GLU A 78 CG CD OE1 OE2 REMARK 470 LYS A 102 CG CD CE NZ REMARK 470 ASN A 173 CG OD1 ND2 REMARK 470 GLU A 278 CG CD OE1 OE2 REMARK 470 LYS A 295 CG CD CE NZ REMARK 470 GLU A 309 CG CD OE1 OE2 REMARK 470 GLU A 310 CG CD OE1 OE2 REMARK 470 ARG A 394 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 408 CG CD OE1 OE2 REMARK 470 LYS A 429 CG CD CE NZ REMARK 470 GLN A 430 CG CD OE1 NE2 REMARK 470 ILE A 431 CG1 CG2 CD1 REMARK 470 LYS B 1 CG CD CE NZ REMARK 470 ILE B 2 CG1 CG2 CD1 REMARK 470 GLU B 3 CG CD OE1 OE2 REMARK 470 LYS B 6 CG CD CE NZ REMARK 470 GLU B 22 CG CD OE1 OE2 REMARK 470 LYS B 29 CG CD CE NZ REMARK 470 LYS B 34 CG CD CE NZ REMARK 470 GLU B 45 CG CD OE1 OE2 REMARK 470 GLU B 78 CG CD OE1 OE2 REMARK 470 ASP B 87 CG OD1 OD2 REMARK 470 LYS B 88 CG CD CE NZ REMARK 470 LYS B 119 CG CD CE NZ REMARK 470 ASN B 173 CG OD1 ND2 REMARK 470 LYS B 202 CG CD CE NZ REMARK 470 GLU B 278 CG CD OE1 OE2 REMARK 470 LYS B 313 CG CD CE NZ REMARK 470 LYS B 409 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 643 O HOH B 674 1.98 REMARK 500 OD1 ASN B 402 O HOH B 601 1.99 REMARK 500 O HOH A 693 O HOH A 720 2.02 REMARK 500 O HOH A 722 O HOH A 729 2.03 REMARK 500 O LEU A 411 O HOH A 601 2.03 REMARK 500 NH1 ARG B 404 O HOH B 602 2.07 REMARK 500 O HOH B 639 O HOH B 662 2.08 REMARK 500 OH TYR A 99 O HOH A 602 2.11 REMARK 500 O3 GLC C 2 O HOH A 603 2.12 REMARK 500 NZ LYS B 140 O LYS B 202 2.13 REMARK 500 OE2 GLU A 44 O HOH A 604 2.13 REMARK 500 OD1 ASP A 287 OG SER A 306 2.14 REMARK 500 NE2 GLN A 86 O HOH A 605 2.14 REMARK 500 O HOH B 624 O HOH B 683 2.15 REMARK 500 OH TYR B 99 O HOH B 603 2.15 REMARK 500 OD1 ASP B 164 NE2 GLN B 253 2.16 REMARK 500 OH TYR B 341 O HOH B 604 2.17 REMARK 500 ND2 ASN A 387 O HOH A 606 2.18 REMARK 500 O2 GLC D 1 O HOH B 605 2.18 REMARK 500 NZ LYS A 413 O HOH A 607 2.19 REMARK 500 OD1 ASP B 287 OG SER B 306 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 688 O HOH B 634 3455 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 55 -162.51 -112.02 REMARK 500 ALA A 168 -79.49 -82.11 REMARK 500 ASN A 173 19.85 58.44 REMARK 500 ASP A 209 -169.83 -124.16 REMARK 500 ASN A 272 32.71 -94.84 REMARK 500 TYR A 283 -55.23 -123.65 REMARK 500 ASP B 55 -162.95 -110.51 REMARK 500 ALA B 168 -78.97 -82.36 REMARK 500 ASN B 173 18.11 55.31 REMARK 500 ASP B 209 -168.58 -122.94 REMARK 500 ASN B 272 35.50 -93.29 REMARK 500 TYR B 283 -55.95 -126.26 REMARK 500 REMARK 500 REMARK: NULL DBREF 5JST A 1 366 UNP P0AEX9 MALE_ECOLI 27 392 DBREF 5JST A 372 442 UNP A6ZQL5 MDV1_YEAS7 230 300 DBREF 5JST B 1 366 UNP P0AEX9 MALE_ECOLI 27 392 DBREF 5JST B 372 442 UNP A6ZQL5 MDV1_YEAS7 230 300 SEQADV 5JST MET A 0 UNP P0AEX9 INITIATING METHIONINE SEQADV 5JST ALA A 82 UNP P0AEX9 ASP 108 ENGINEERED MUTATION SEQADV 5JST ALA A 83 UNP P0AEX9 LYS 109 ENGINEERED MUTATION SEQADV 5JST ALA A 239 UNP P0AEX9 LYS 265 ENGINEERED MUTATION SEQADV 5JST ALA A 359 UNP P0AEX9 GLU 385 ENGINEERED MUTATION SEQADV 5JST ALA A 362 UNP P0AEX9 LYS 388 ENGINEERED MUTATION SEQADV 5JST ALA A 363 UNP P0AEX9 ASP 389 ENGINEERED MUTATION SEQADV 5JST ASN A 367 UNP P0AEX9 LINKER SEQADV 5JST ALA A 368 UNP P0AEX9 LINKER SEQADV 5JST ALA A 369 UNP P0AEX9 LINKER SEQADV 5JST ALA A 370 UNP P0AEX9 LINKER SEQADV 5JST GLY A 371 UNP P0AEX9 LINKER SEQADV 5JST MET B 0 UNP P0AEX9 INITIATING METHIONINE SEQADV 5JST ALA B 82 UNP P0AEX9 ASP 108 ENGINEERED MUTATION SEQADV 5JST ALA B 83 UNP P0AEX9 LYS 109 ENGINEERED MUTATION SEQADV 5JST ALA B 239 UNP P0AEX9 LYS 265 ENGINEERED MUTATION SEQADV 5JST ALA B 359 UNP P0AEX9 GLU 385 ENGINEERED MUTATION SEQADV 5JST ALA B 362 UNP P0AEX9 LYS 388 ENGINEERED MUTATION SEQADV 5JST ALA B 363 UNP P0AEX9 ASP 389 ENGINEERED MUTATION SEQADV 5JST ASN B 367 UNP P0AEX9 LINKER SEQADV 5JST ALA B 368 UNP P0AEX9 LINKER SEQADV 5JST ALA B 369 UNP P0AEX9 LINKER SEQADV 5JST ALA B 370 UNP P0AEX9 LINKER SEQADV 5JST GLY B 371 UNP P0AEX9 LINKER SEQRES 1 A 443 MET LYS ILE GLU GLU GLY LYS LEU VAL ILE TRP ILE ASN SEQRES 2 A 443 GLY ASP LYS GLY TYR ASN GLY LEU ALA GLU VAL GLY LYS SEQRES 3 A 443 LYS PHE GLU LYS ASP THR GLY ILE LYS VAL THR VAL GLU SEQRES 4 A 443 HIS PRO ASP LYS LEU GLU GLU LYS PHE PRO GLN VAL ALA SEQRES 5 A 443 ALA THR GLY ASP GLY PRO ASP ILE ILE PHE TRP ALA HIS SEQRES 6 A 443 ASP ARG PHE GLY GLY TYR ALA GLN SER GLY LEU LEU ALA SEQRES 7 A 443 GLU ILE THR PRO ALA ALA ALA PHE GLN ASP LYS LEU TYR SEQRES 8 A 443 PRO PHE THR TRP ASP ALA VAL ARG TYR ASN GLY LYS LEU SEQRES 9 A 443 ILE ALA TYR PRO ILE ALA VAL GLU ALA LEU SER LEU ILE SEQRES 10 A 443 TYR ASN LYS ASP LEU LEU PRO ASN PRO PRO LYS THR TRP SEQRES 11 A 443 GLU GLU ILE PRO ALA LEU ASP LYS GLU LEU LYS ALA LYS SEQRES 12 A 443 GLY LYS SER ALA LEU MET PHE ASN LEU GLN GLU PRO TYR SEQRES 13 A 443 PHE THR TRP PRO LEU ILE ALA ALA ASP GLY GLY TYR ALA SEQRES 14 A 443 PHE LYS TYR GLU ASN GLY LYS TYR ASP ILE LYS ASP VAL SEQRES 15 A 443 GLY VAL ASP ASN ALA GLY ALA LYS ALA GLY LEU THR PHE SEQRES 16 A 443 LEU VAL ASP LEU ILE LYS ASN LYS HIS MET ASN ALA ASP SEQRES 17 A 443 THR ASP TYR SER ILE ALA GLU ALA ALA PHE ASN LYS GLY SEQRES 18 A 443 GLU THR ALA MET THR ILE ASN GLY PRO TRP ALA TRP SER SEQRES 19 A 443 ASN ILE ASP THR SER ALA VAL ASN TYR GLY VAL THR VAL SEQRES 20 A 443 LEU PRO THR PHE LYS GLY GLN PRO SER LYS PRO PHE VAL SEQRES 21 A 443 GLY VAL LEU SER ALA GLY ILE ASN ALA ALA SER PRO ASN SEQRES 22 A 443 LYS GLU LEU ALA LYS GLU PHE LEU GLU ASN TYR LEU LEU SEQRES 23 A 443 THR ASP GLU GLY LEU GLU ALA VAL ASN LYS ASP LYS PRO SEQRES 24 A 443 LEU GLY ALA VAL ALA LEU LYS SER TYR GLU GLU GLU LEU SEQRES 25 A 443 ALA LYS ASP PRO ARG ILE ALA ALA THR MET GLU ASN ALA SEQRES 26 A 443 GLN LYS GLY GLU ILE MET PRO ASN ILE PRO GLN MET SER SEQRES 27 A 443 ALA PHE TRP TYR ALA VAL ARG THR ALA VAL ILE ASN ALA SEQRES 28 A 443 ALA SER GLY ARG GLN THR VAL ASP ALA ALA LEU ALA ALA SEQRES 29 A 443 ALA GLN THR ASN ALA ALA ALA GLY SER GLN THR LEU VAL SEQRES 30 A 443 ASN SER LEU GLU PHE LEU ASN ILE GLN LYS ASN SER THR SEQRES 31 A 443 LEU SER GLU ILE ARG ASP ILE GLU VAL GLU VAL GLU ASN SEQRES 32 A 443 LEU ARG GLN LYS LYS GLU LYS LEU LEU GLY LYS ILE ALA SEQRES 33 A 443 ASN ILE GLU GLN ASN GLN LEU LEU LEU GLU ASP ASN LEU SEQRES 34 A 443 LYS GLN ILE ASP ASP ARG LEU ASP PHE LEU GLU GLU TYR SEQRES 35 A 443 GLY SEQRES 1 B 443 MET LYS ILE GLU GLU GLY LYS LEU VAL ILE TRP ILE ASN SEQRES 2 B 443 GLY ASP LYS GLY TYR ASN GLY LEU ALA GLU VAL GLY LYS SEQRES 3 B 443 LYS PHE GLU LYS ASP THR GLY ILE LYS VAL THR VAL GLU SEQRES 4 B 443 HIS PRO ASP LYS LEU GLU GLU LYS PHE PRO GLN VAL ALA SEQRES 5 B 443 ALA THR GLY ASP GLY PRO ASP ILE ILE PHE TRP ALA HIS SEQRES 6 B 443 ASP ARG PHE GLY GLY TYR ALA GLN SER GLY LEU LEU ALA SEQRES 7 B 443 GLU ILE THR PRO ALA ALA ALA PHE GLN ASP LYS LEU TYR SEQRES 8 B 443 PRO PHE THR TRP ASP ALA VAL ARG TYR ASN GLY LYS LEU SEQRES 9 B 443 ILE ALA TYR PRO ILE ALA VAL GLU ALA LEU SER LEU ILE SEQRES 10 B 443 TYR ASN LYS ASP LEU LEU PRO ASN PRO PRO LYS THR TRP SEQRES 11 B 443 GLU GLU ILE PRO ALA LEU ASP LYS GLU LEU LYS ALA LYS SEQRES 12 B 443 GLY LYS SER ALA LEU MET PHE ASN LEU GLN GLU PRO TYR SEQRES 13 B 443 PHE THR TRP PRO LEU ILE ALA ALA ASP GLY GLY TYR ALA SEQRES 14 B 443 PHE LYS TYR GLU ASN GLY LYS TYR ASP ILE LYS ASP VAL SEQRES 15 B 443 GLY VAL ASP ASN ALA GLY ALA LYS ALA GLY LEU THR PHE SEQRES 16 B 443 LEU VAL ASP LEU ILE LYS ASN LYS HIS MET ASN ALA ASP SEQRES 17 B 443 THR ASP TYR SER ILE ALA GLU ALA ALA PHE ASN LYS GLY SEQRES 18 B 443 GLU THR ALA MET THR ILE ASN GLY PRO TRP ALA TRP SER SEQRES 19 B 443 ASN ILE ASP THR SER ALA VAL ASN TYR GLY VAL THR VAL SEQRES 20 B 443 LEU PRO THR PHE LYS GLY GLN PRO SER LYS PRO PHE VAL SEQRES 21 B 443 GLY VAL LEU SER ALA GLY ILE ASN ALA ALA SER PRO ASN SEQRES 22 B 443 LYS GLU LEU ALA LYS GLU PHE LEU GLU ASN TYR LEU LEU SEQRES 23 B 443 THR ASP GLU GLY LEU GLU ALA VAL ASN LYS ASP LYS PRO SEQRES 24 B 443 LEU GLY ALA VAL ALA LEU LYS SER TYR GLU GLU GLU LEU SEQRES 25 B 443 ALA LYS ASP PRO ARG ILE ALA ALA THR MET GLU ASN ALA SEQRES 26 B 443 GLN LYS GLY GLU ILE MET PRO ASN ILE PRO GLN MET SER SEQRES 27 B 443 ALA PHE TRP TYR ALA VAL ARG THR ALA VAL ILE ASN ALA SEQRES 28 B 443 ALA SER GLY ARG GLN THR VAL ASP ALA ALA LEU ALA ALA SEQRES 29 B 443 ALA GLN THR ASN ALA ALA ALA GLY SER GLN THR LEU VAL SEQRES 30 B 443 ASN SER LEU GLU PHE LEU ASN ILE GLN LYS ASN SER THR SEQRES 31 B 443 LEU SER GLU ILE ARG ASP ILE GLU VAL GLU VAL GLU ASN SEQRES 32 B 443 LEU ARG GLN LYS LYS GLU LYS LEU LEU GLY LYS ILE ALA SEQRES 33 B 443 ASN ILE GLU GLN ASN GLN LEU LEU LEU GLU ASP ASN LEU SEQRES 34 B 443 LYS GLN ILE ASP ASP ARG LEU ASP PHE LEU GLU GLU TYR SEQRES 35 B 443 GLY HET GLC C 1 12 HET GLC C 2 11 HET GLC D 1 12 HET GLC D 2 11 HET ACT A 502 4 HET ACT A 503 4 HET ACT A 504 7 HET ACT A 505 7 HET GOL A 506 14 HET ACT B 502 4 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM ACT ACETATE ION HETNAM GOL GLYCEROL HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GLC 4(C6 H12 O6) FORMUL 5 ACT 5(C2 H3 O2 1-) FORMUL 9 GOL C3 H8 O3 FORMUL 11 HOH *221(H2 O) HELIX 1 AA1 GLY A 16 GLY A 32 1 17 HELIX 2 AA2 LYS A 42 ALA A 52 1 11 HELIX 3 AA3 ARG A 66 SER A 73 1 8 HELIX 4 AA4 ALA A 82 ASP A 87 1 6 HELIX 5 AA5 TYR A 90 VAL A 97 1 8 HELIX 6 AA6 GLU A 131 LYS A 142 1 12 HELIX 7 AA7 GLU A 153 ASP A 164 1 12 HELIX 8 AA8 ASN A 185 ASN A 201 1 17 HELIX 9 AA9 ASP A 209 LYS A 219 1 11 HELIX 10 AB1 GLY A 228 TRP A 230 5 3 HELIX 11 AB2 ALA A 231 SER A 238 1 8 HELIX 12 AB3 ASN A 272 TYR A 283 1 12 HELIX 13 AB4 THR A 286 LYS A 297 1 12 HELIX 14 AB5 LEU A 304 ALA A 312 1 9 HELIX 15 AB6 ASP A 314 GLY A 327 1 14 HELIX 16 AB7 GLN A 335 SER A 352 1 18 HELIX 17 AB8 THR A 356 ALA A 370 1 15 HELIX 18 AB9 SER A 372 ILE A 431 1 60 HELIX 19 AC1 GLY B 16 GLY B 32 1 17 HELIX 20 AC2 LYS B 42 ALA B 52 1 11 HELIX 21 AC3 ARG B 66 SER B 73 1 8 HELIX 22 AC4 ALA B 82 ASP B 87 1 6 HELIX 23 AC5 TYR B 90 VAL B 97 1 8 HELIX 24 AC6 THR B 128 GLU B 130 5 3 HELIX 25 AC7 GLU B 131 ALA B 141 1 11 HELIX 26 AC8 GLU B 153 ASP B 164 1 12 HELIX 27 AC9 ASN B 185 ASN B 201 1 17 HELIX 28 AD1 ASP B 209 LYS B 219 1 11 HELIX 29 AD2 GLY B 228 TRP B 230 5 3 HELIX 30 AD3 ALA B 231 THR B 237 1 7 HELIX 31 AD4 ASN B 272 TYR B 283 1 12 HELIX 32 AD5 THR B 286 LYS B 297 1 12 HELIX 33 AD6 LEU B 304 ALA B 312 1 9 HELIX 34 AD7 ASP B 314 GLY B 327 1 14 HELIX 35 AD8 GLN B 335 SER B 352 1 18 HELIX 36 AD9 THR B 356 ALA B 370 1 15 HELIX 37 AE1 SER B 372 ASP B 432 1 61 SHEET 1 AA1 6 VAL A 35 GLU A 38 0 SHEET 2 AA1 6 LEU A 7 TRP A 10 1 N LEU A 7 O THR A 36 SHEET 3 AA1 6 ILE A 59 ALA A 63 1 O PHE A 61 N TRP A 10 SHEET 4 AA1 6 PHE A 258 ILE A 266 -1 O GLY A 265 N ILE A 60 SHEET 5 AA1 6 TYR A 106 GLU A 111 -1 N GLU A 111 O GLY A 260 SHEET 6 AA1 6 ALA A 301 VAL A 302 -1 O ALA A 301 N VAL A 110 SHEET 1 AA2 5 VAL A 35 GLU A 38 0 SHEET 2 AA2 5 LEU A 7 TRP A 10 1 N LEU A 7 O THR A 36 SHEET 3 AA2 5 ILE A 59 ALA A 63 1 O PHE A 61 N TRP A 10 SHEET 4 AA2 5 PHE A 258 ILE A 266 -1 O GLY A 265 N ILE A 60 SHEET 5 AA2 5 GLU A 328 ILE A 329 1 O GLU A 328 N VAL A 259 SHEET 1 AA3 2 ARG A 98 TYR A 99 0 SHEET 2 AA3 2 LYS A 102 LEU A 103 -1 O LYS A 102 N TYR A 99 SHEET 1 AA4 4 SER A 145 LEU A 147 0 SHEET 2 AA4 4 THR A 222 ASN A 227 1 O ALA A 223 N SER A 145 SHEET 3 AA4 4 SER A 114 ASN A 118 -1 N ASN A 118 O ALA A 223 SHEET 4 AA4 4 TYR A 242 THR A 245 -1 O THR A 245 N LEU A 115 SHEET 1 AA5 2 TYR A 167 GLU A 172 0 SHEET 2 AA5 2 LYS A 175 GLY A 182 -1 O ASP A 180 N LYS A 170 SHEET 1 AA6 2 THR A 249 PHE A 250 0 SHEET 2 AA6 2 GLN A 253 PRO A 254 -1 O GLN A 253 N PHE A 250 SHEET 1 AA7 6 VAL B 35 GLU B 38 0 SHEET 2 AA7 6 LEU B 7 TRP B 10 1 N ILE B 9 O THR B 36 SHEET 3 AA7 6 ILE B 59 ALA B 63 1 O PHE B 61 N TRP B 10 SHEET 4 AA7 6 PHE B 258 ILE B 266 -1 O GLY B 265 N ILE B 60 SHEET 5 AA7 6 TYR B 106 GLU B 111 -1 N GLU B 111 O GLY B 260 SHEET 6 AA7 6 ALA B 301 VAL B 302 -1 O ALA B 301 N VAL B 110 SHEET 1 AA8 5 VAL B 35 GLU B 38 0 SHEET 2 AA8 5 LEU B 7 TRP B 10 1 N ILE B 9 O THR B 36 SHEET 3 AA8 5 ILE B 59 ALA B 63 1 O PHE B 61 N TRP B 10 SHEET 4 AA8 5 PHE B 258 ILE B 266 -1 O GLY B 265 N ILE B 60 SHEET 5 AA8 5 GLU B 328 ILE B 329 1 O GLU B 328 N VAL B 259 SHEET 1 AA9 2 ARG B 98 TYR B 99 0 SHEET 2 AA9 2 LYS B 102 LEU B 103 -1 O LYS B 102 N TYR B 99 SHEET 1 AB1 4 SER B 145 LEU B 147 0 SHEET 2 AB1 4 THR B 222 ASN B 227 1 O ALA B 223 N SER B 145 SHEET 3 AB1 4 SER B 114 ASN B 118 -1 N ASN B 118 O ALA B 223 SHEET 4 AB1 4 TYR B 242 THR B 245 -1 O THR B 245 N LEU B 115 SHEET 1 AB2 2 TYR B 167 GLU B 172 0 SHEET 2 AB2 2 LYS B 175 GLY B 182 -1 O ASP B 180 N LYS B 170 SHEET 1 AB3 2 THR B 249 PHE B 250 0 SHEET 2 AB3 2 GLN B 253 PRO B 254 -1 O GLN B 253 N PHE B 250 LINK O4 GLC C 1 C1 GLC C 2 1555 1555 1.40 LINK O4 GLC D 1 C1 GLC D 2 1555 1555 1.42 CRYST1 128.515 102.942 79.267 90.00 102.51 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007781 0.000000 0.001727 0.00000 SCALE2 0.000000 0.009714 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012923 0.00000