HEADER OXIDOREDUCTASE 09-MAY-16 5JT1 TITLE THE 3D STRUCTURE OF NI-RECONSTITUTED U489C VARIANT OF [NIFESE] TITLE 2 HYDROGENASE FROM DESULFOVIBRIO VULGARIS HILDENBOROUGH IN THE OXIDIZED TITLE 3 STATE AT 1.35 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPLASMIC [NIFESE] HYDROGENASE, SMALL SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 EC: 1.12.7.2; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PERIPLASMIC [NIFESE] HYDROGENASE, LARGE SUBUNIT, COMPND 8 SELENOCYSTEINE-CONTAINING; COMPND 9 CHAIN: B; COMPND 10 EC: 1.12.7.2; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES; COMPND 13 OTHER_DETAILS: CYS489 IS OXIDIZED TO SULFINATE (CSD) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFOVIBRIO VULGARIS STR. HILDENBOROUGH; SOURCE 3 ORGANISM_TAXID: 882; SOURCE 4 GENE: HYSB, DVU_1917; SOURCE 5 EXPRESSION_SYSTEM: DESULFOVIBRIO VULGARIS STR. HILDENBOROUGH; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 882; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: DESULFOVIBRIO VULGARIS STR. HILDENBOROUGH; SOURCE 9 ORGANISM_TAXID: 882; SOURCE 10 GENE: HYSA, DVU_1918; SOURCE 11 EXPRESSION_SYSTEM: DESULFOVIBRIO VULGARIS STR. HILDENBOROUGH; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 882 KEYWDS NIFESE-SITE H2 CLEAVAGE/PRODUCTION, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.C.MARQUES,I.A.C.PEREIRA,P.M.MATIAS REVDAT 4 03-APR-24 5JT1 1 SSBOND LINK REVDAT 3 10-JAN-24 5JT1 1 SSBOND LINK REVDAT 2 03-MAY-17 5JT1 1 JRNL REVDAT 1 22-MAR-17 5JT1 0 JRNL AUTH M.C.MARQUES,C.TAPIA,O.GUTIERREZ-SANZ,A.R.RAMOS,K.L.KELLER, JRNL AUTH 2 J.D.WALL,A.L.DE LACEY,P.M.MATIAS,I.A.C.PEREIRA JRNL TITL THE DIRECT ROLE OF SELENOCYSTEINE IN [NIFESE] HYDROGENASE JRNL TITL 2 MATURATION AND CATALYSIS. JRNL REF NAT. CHEM. BIOL. V. 13 544 2017 JRNL REFN ESSN 1552-4469 JRNL PMID 28319099 JRNL DOI 10.1038/NCHEMBIO.2335 REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.090 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 151825 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.117 REMARK 3 R VALUE (WORKING SET) : 0.116 REMARK 3 FREE R VALUE : 0.145 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 7574 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.6520 - 4.1937 0.99 5008 297 0.1214 0.1300 REMARK 3 2 4.1937 - 3.3290 0.99 5024 208 0.1054 0.1297 REMARK 3 3 3.3290 - 2.9083 0.99 4928 275 0.1151 0.1315 REMARK 3 4 2.9083 - 2.6424 0.99 4880 265 0.1059 0.1341 REMARK 3 5 2.6424 - 2.4530 0.99 4924 238 0.1004 0.1231 REMARK 3 6 2.4530 - 2.3084 0.99 4878 250 0.0927 0.1139 REMARK 3 7 2.3084 - 2.1928 0.99 4871 240 0.0902 0.1118 REMARK 3 8 2.1928 - 2.0973 0.98 4849 279 0.0912 0.1201 REMARK 3 9 2.0973 - 2.0166 0.98 4826 281 0.0938 0.1279 REMARK 3 10 2.0166 - 1.9470 0.98 4820 278 0.0961 0.1438 REMARK 3 11 1.9470 - 1.8861 0.98 4844 254 0.0986 0.1316 REMARK 3 12 1.8861 - 1.8322 0.98 4785 271 0.0980 0.1389 REMARK 3 13 1.8322 - 1.7840 0.98 4789 259 0.1001 0.1460 REMARK 3 14 1.7840 - 1.7404 0.98 4833 258 0.0997 0.1290 REMARK 3 15 1.7404 - 1.7009 0.97 4723 276 0.1095 0.1552 REMARK 3 16 1.7009 - 1.6647 0.97 4828 238 0.1169 0.1620 REMARK 3 17 1.6647 - 1.6314 0.97 4765 241 0.1168 0.1456 REMARK 3 18 1.6314 - 1.6006 0.97 4801 255 0.1190 0.1714 REMARK 3 19 1.6006 - 1.5720 0.97 4798 227 0.1280 0.1670 REMARK 3 20 1.5720 - 1.5454 0.97 4748 271 0.1418 0.1926 REMARK 3 21 1.5454 - 1.5204 0.97 4756 256 0.1481 0.1943 REMARK 3 22 1.5204 - 1.4970 0.97 4779 230 0.1546 0.1971 REMARK 3 23 1.4970 - 1.4750 0.97 4702 239 0.1632 0.1932 REMARK 3 24 1.4750 - 1.4542 0.97 4794 265 0.1719 0.2082 REMARK 3 25 1.4542 - 1.4346 0.96 4695 229 0.1866 0.2310 REMARK 3 26 1.4346 - 1.4160 0.96 4730 247 0.2029 0.2577 REMARK 3 27 1.4160 - 1.3983 0.96 4765 222 0.2099 0.2638 REMARK 3 28 1.3983 - 1.3814 0.96 4733 232 0.2259 0.2865 REMARK 3 29 1.3814 - 1.3653 0.96 4689 258 0.2337 0.2868 REMARK 3 30 1.3653 - 1.3500 0.96 4686 235 0.2325 0.2605 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 9.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 6361 REMARK 3 ANGLE : 1.227 8655 REMARK 3 CHIRALITY : 0.085 946 REMARK 3 PLANARITY : 0.008 1128 REMARK 3 DIHEDRAL : 14.859 2398 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JT1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221190. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-SEP-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS MARCH 1, 2015 REMARK 200 DATA SCALING SOFTWARE : XDS MARCH 1, 2015 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 151830 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.350 REMARK 200 RESOLUTION RANGE LOW (A) : 45.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 1.17700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2WPN REMARK 200 REMARK 200 REMARK: IRREGULAR HEXAGONAL PLATE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350 AND 0.2M SODIUM MALONATE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 53.38900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.59150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 53.38900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.59150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -122.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -33 REMARK 465 SER A -32 REMARK 465 LEU A -31 REMARK 465 THR A -30 REMARK 465 ARG A -29 REMARK 465 ARG A -28 REMARK 465 ASP A -27 REMARK 465 PHE A -26 REMARK 465 VAL A -25 REMARK 465 LYS A -24 REMARK 465 LEU A -23 REMARK 465 CYS A -22 REMARK 465 THR A -21 REMARK 465 GLY A -20 REMARK 465 THR A -19 REMARK 465 VAL A -18 REMARK 465 ALA A -17 REMARK 465 GLY A -16 REMARK 465 PHE A -15 REMARK 465 GLY A -14 REMARK 465 ILE A -13 REMARK 465 SER A -12 REMARK 465 GLN A -11 REMARK 465 MET A -10 REMARK 465 PHE A -9 REMARK 465 HIS A -8 REMARK 465 PRO A -7 REMARK 465 ALA A -6 REMARK 465 VAL A -5 REMARK 465 HIS A -4 REMARK 465 GLU A -3 REMARK 465 ALA A -2 REMARK 465 LEU A -1 REMARK 465 ALA A 0 REMARK 465 TRP B 4 REMARK 465 SER B 5 REMARK 465 HIS B 6 REMARK 465 PRO B 7 REMARK 465 GLN B 8 REMARK 465 PHE B 9 REMARK 465 GLU B 10 REMARK 465 LYS B 11 REMARK 465 GLY B 12 REMARK 465 VAL B 496 REMARK 465 LEU B 497 REMARK 465 HIS B 498 REMARK 465 ALA B 499 REMARK 465 GLU B 500 REMARK 465 SER B 501 REMARK 465 GLY B 502 REMARK 465 LYS B 503 REMARK 465 VAL B 504 REMARK 465 ALA B 505 REMARK 465 VAL B 506 REMARK 465 ILE B 507 REMARK 465 GLU B 508 REMARK 465 VAL B 509 REMARK 465 LYS B 510 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 813 O HOH B 866 1.96 REMARK 500 O HOH B 709 O HOH B 997 2.02 REMARK 500 O HOH B 1015 O HOH B 1161 2.09 REMARK 500 OG1 THR A 2 O HOH A 401 2.10 REMARK 500 O HOH A 420 O HOH A 624 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 605 O HOH A 605 2658 1.50 REMARK 500 O HOH A 401 O HOH B 1053 3545 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 458 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 46 113.08 -161.56 REMARK 500 GLU A 134 22.31 -143.93 REMARK 500 LYS A 251 -163.89 58.10 REMARK 500 LYS A 251 -163.89 56.17 REMARK 500 ALA A 263 -101.91 -155.64 REMARK 500 HIS B 185 78.98 76.24 REMARK 500 PHE B 251 81.57 69.96 REMARK 500 TYR B 313 16.09 -140.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 686 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH B1170 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH B1171 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH B1172 DISTANCE = 6.11 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 303 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 18 SG REMARK 620 2 SF4 A 303 S2 101.1 REMARK 620 3 SF4 A 303 S3 126.3 107.6 REMARK 620 4 SF4 A 303 S4 112.3 103.7 103.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 6ML A 304 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 18 SG REMARK 620 2 6ML A 304 O12 93.0 REMARK 620 3 6ML A 304 S3 119.0 107.5 REMARK 620 4 6ML A 304 S2 119.3 106.8 108.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 303 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 21 SG REMARK 620 2 SF4 A 303 S1 109.1 REMARK 620 3 SF4 A 303 S2 120.0 100.9 REMARK 620 4 SF4 A 303 S3 114.7 101.9 107.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 6ML A 304 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 77 OE2 REMARK 620 2 6ML A 304 O12 78.5 REMARK 620 3 6ML A 304 O24 149.5 102.6 REMARK 620 4 6ML A 304 S1 102.4 104.8 106.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 303 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 121 SG REMARK 620 2 SF4 A 303 S1 109.4 REMARK 620 3 SF4 A 303 S3 133.8 102.0 REMARK 620 4 SF4 A 303 S4 97.5 108.1 103.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 6ML A 304 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 121 SG REMARK 620 2 6ML A 304 O24 115.9 REMARK 620 3 6ML A 304 S3 100.7 109.6 REMARK 620 4 6ML A 304 S4 125.7 97.8 106.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 303 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 159 SG REMARK 620 2 SF4 A 303 S1 116.0 REMARK 620 3 SF4 A 303 S2 125.1 101.3 REMARK 620 4 SF4 A 303 S4 102.0 107.9 103.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 6ML A 304 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 159 SG REMARK 620 2 6ML A 304 S3 119.8 REMARK 620 3 6ML A 304 S2 113.8 107.5 REMARK 620 4 6ML A 304 S4 100.9 106.0 107.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 301 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 208 ND1 REMARK 620 2 SF4 A 301 S1 103.0 REMARK 620 3 SF4 A 301 S3 119.2 106.6 REMARK 620 4 SF4 A 301 S4 118.3 105.7 102.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 301 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 211 SG REMARK 620 2 SF4 A 301 S1 113.2 REMARK 620 3 SF4 A 301 S2 119.8 102.5 REMARK 620 4 SF4 A 301 S3 107.6 106.4 106.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 301 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 232 SG REMARK 620 2 SF4 A 301 S1 119.2 REMARK 620 3 SF4 A 301 S2 120.3 103.6 REMARK 620 4 SF4 A 301 S4 101.4 106.6 104.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 301 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 238 SG REMARK 620 2 SF4 A 301 S2 117.4 REMARK 620 3 SF4 A 301 S3 110.0 106.1 REMARK 620 4 SF4 A 301 S4 115.8 103.0 103.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 302 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 247 SG REMARK 620 2 SF4 A 302 S1 114.9 REMARK 620 3 SF4 A 302 S2 104.7 105.0 REMARK 620 4 SF4 A 302 S3 123.6 103.9 102.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 302 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 259 SG REMARK 620 2 SF4 A 302 S1 109.5 REMARK 620 3 SF4 A 302 S2 115.8 105.6 REMARK 620 4 SF4 A 302 S4 115.8 104.9 104.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 302 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 265 SG REMARK 620 2 SF4 A 302 S1 113.1 REMARK 620 3 SF4 A 302 S3 118.3 103.8 REMARK 620 4 SF4 A 302 S4 111.7 105.2 103.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 302 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 268 SG REMARK 620 2 SF4 A 302 S2 107.7 REMARK 620 3 SF4 A 302 S3 121.1 103.3 REMARK 620 4 SF4 A 302 S4 114.5 104.1 104.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 B 603 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 56 OE2 REMARK 620 2 ILE B 441 O 93.6 REMARK 620 3 HIS B 495 NE2 90.2 92.0 REMARK 620 4 HOH B 713 O 85.5 90.5 175.2 REMARK 620 5 HOH B 720 O 92.2 173.7 90.4 87.5 REMARK 620 6 HOH B 741 O 175.3 86.4 94.5 89.8 87.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 602 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CSX B 75 SG REMARK 620 2 CYS B 78 SG 91.4 REMARK 620 3 CYS B 489 SG 88.3 174.4 REMARK 620 4 CYS B 492 SG 114.7 75.1 100.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FCO B 601 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 78 SG REMARK 620 2 FCO B 601 C1 168.8 REMARK 620 3 FCO B 601 C2 93.6 90.6 REMARK 620 4 FCO B 601 C3 100.5 89.5 94.0 REMARK 620 5 CYS B 492 SG 83.1 92.2 175.9 88.9 REMARK 620 6 HOH B1056 O 87.7 82.8 80.6 170.5 96.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6ML A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FCO B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE2 B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue H2S B 604 DBREF 5JT1 A -33 283 UNP Q72AS4 Q72AS4_DESVH 1 317 DBREF 5JT1 B 12 510 UNP Q72AS3 Q72AS3_DESVH 12 510 SEQADV 5JT1 TRP B 4 UNP Q72AS3 EXPRESSION TAG SEQADV 5JT1 SER B 5 UNP Q72AS3 EXPRESSION TAG SEQADV 5JT1 HIS B 6 UNP Q72AS3 EXPRESSION TAG SEQADV 5JT1 PRO B 7 UNP Q72AS3 EXPRESSION TAG SEQADV 5JT1 GLN B 8 UNP Q72AS3 EXPRESSION TAG SEQADV 5JT1 PHE B 9 UNP Q72AS3 EXPRESSION TAG SEQADV 5JT1 GLU B 10 UNP Q72AS3 EXPRESSION TAG SEQADV 5JT1 LYS B 11 UNP Q72AS3 EXPRESSION TAG SEQADV 5JT1 CYS B 489 UNP Q72AS3 SEC 489 ENGINEERED MUTATION SEQRES 1 A 317 MET SER LEU THR ARG ARG ASP PHE VAL LYS LEU CYS THR SEQRES 2 A 317 GLY THR VAL ALA GLY PHE GLY ILE SER GLN MET PHE HIS SEQRES 3 A 317 PRO ALA VAL HIS GLU ALA LEU ALA GLY THR LEU THR GLY SEQRES 4 A 317 GLU ARG PRO PRO VAL PHE TRP LEU GLN GLY GLN GLY CYS SEQRES 5 A 317 THR GLY CYS SER VAL THR LEU LEU ASN SER VAL HIS PRO SEQRES 6 A 317 SER ILE ALA ASP VAL LEU LEU LYS VAL ILE SER LEU GLU SEQRES 7 A 317 PHE HIS PRO THR VAL MET ALA TRP GLU GLY GLU HIS ALA SEQRES 8 A 317 ILE GLU HIS MET ARG LYS VAL ALA GLU LYS PHE LYS GLY SEQRES 9 A 317 LYS PHE PHE LEU VAL ILE GLU GLY SER VAL PRO VAL GLU SEQRES 10 A 317 ALA ASP GLY LYS TYR CYS ILE ILE GLY GLU ALA ASN HIS SEQRES 11 A 317 HIS GLU ILE SER MET VAL ASP ALA LEU LYS GLU PHE GLY SEQRES 12 A 317 PRO ASN ALA ALA ALA VAL LEU ALA VAL GLY THR CYS ALA SEQRES 13 A 317 ALA TYR GLY GLY ILE PRO ALA ALA GLU GLY SER GLU THR SEQRES 14 A 317 GLY ALA THR ALA VAL SER LYS PHE LEU GLY ASP ASN GLY SEQRES 15 A 317 ILE LYS THR PRO VAL VAL ASN ILE PRO GLY CYS PRO PRO SEQRES 16 A 317 HIS PRO ASP TRP ILE VAL GLY THR VAL VAL LEU ALA LEU SEQRES 17 A 317 ASP ALA ILE LYS LYS ASN GLY LEU GLU GLY GLY LEU ALA SEQRES 18 A 317 GLU VAL VAL LYS VAL LEU ASP SER ASP GLY ARG PRO THR SEQRES 19 A 317 PRO PHE PHE GLY ARG ASN ILE HIS GLU ASN CYS PRO TYR SEQRES 20 A 317 LEU ASP LYS TYR ASP GLU GLY VAL MET SER ALA THR PHE SEQRES 21 A 317 THR ASP LYS VAL GLY CYS ARG TYR ASP LEU GLY CYS LYS SEQRES 22 A 317 GLY PRO MET THR MET ALA ASP CYS PHE GLU ARG LYS TRP SEQRES 23 A 317 ASN GLY GLY VAL ASN TRP CYS VAL GLN ASN ALA VAL CYS SEQRES 24 A 317 ILE GLY CYS VAL GLU PRO ASP PHE PRO ASP GLY LYS SER SEQRES 25 A 317 PRO PHE TYR GLN ALA SEQRES 1 B 507 TRP SER HIS PRO GLN PHE GLU LYS GLY ALA THR GLY ARG SEQRES 2 B 507 THR THR ILE ALA ILE ASP PRO VAL THR ARG ILE GLU GLY SEQRES 3 B 507 HIS LEU LYS ALA GLU VAL VAL VAL GLU ASN GLY LYS VAL SEQRES 4 B 507 VAL ASP ALA ARG LEU SER GLY GLY MET TYR ARG GLY PHE SEQRES 5 B 507 GLU THR ILE LEU ARG GLY ARG ASP PRO ARG ASP ALA SER SEQRES 6 B 507 GLN ILE VAL GLN ARG ILE CSX GLY VAL CYS PRO THR ALA SEQRES 7 B 507 HIS SER THR ALA SER VAL LEU ALA LEU ASP GLU ALA PHE SEQRES 8 B 507 GLY ALA LYS VAL PRO ASN ASN GLY ARG ILE THR ARG ASN SEQRES 9 B 507 LEU ILE PHE GLY ALA ASN TYR LEU GLN SER HIS ILE LEU SEQRES 10 B 507 HIS PHE TYR HIS LEU SER ALA GLN ASP PHE VAL GLN GLY SEQRES 11 B 507 PRO ASP THR ALA PRO PHE VAL PRO ARG PHE PRO LYS SER SEQRES 12 B 507 ASP LEU ARG LEU SER LYS GLU LEU ASN LYS ALA GLY VAL SEQRES 13 B 507 ASP GLN TYR ILE GLU ALA LEU GLU VAL ARG ARG ILE CYS SEQRES 14 B 507 HIS GLU MET VAL ALA LEU PHE GLY GLY ARG MET PRO HIS SEQRES 15 B 507 VAL GLN GLY GLN VAL VAL GLY GLY ALA THR GLU ILE PRO SEQRES 16 B 507 THR LYS GLU LYS LEU VAL GLU TYR ALA ALA ARG PHE LYS SEQRES 17 B 507 LYS VAL ARG ASP PHE VAL GLU GLN LYS TYR VAL PRO VAL SEQRES 18 B 507 VAL TYR THR ILE GLY SER LYS TYR LYS ASP MET PHE LYS SEQRES 19 B 507 VAL GLY GLN GLY PHE LYS ALA ALA LEU CYS VAL GLY ALA SEQRES 20 B 507 PHE PRO LEU ASP ASN SER GLY LYS LYS HIS LEU PHE MET SEQRES 21 B 507 PRO GLY VAL TYR ALA LYS GLY LYS ASP MET PRO PHE ASP SEQRES 22 B 507 PRO SER LYS ILE LYS GLU TYR VAL LYS TYR SER TRP PHE SEQRES 23 B 507 ALA GLU GLU THR THR GLY LEU ASN TYR LYS GLU GLY LYS SEQRES 24 B 507 THR ILE PRO ALA PRO ASP LYS ALA GLY ALA TYR SER PHE SEQRES 25 B 507 VAL LYS ALA PRO ARG TYR ASP GLY LEU SER LEU GLU VAL SEQRES 26 B 507 GLY PRO LEU ALA ARG MET TRP VAL ASN ASN PRO GLU LEU SEQRES 27 B 507 SER PRO VAL GLY LYS LYS LEU LEU LYS ASP LEU PHE GLY SEQRES 28 B 507 ILE SER ALA LYS LYS PHE ARG ASP LEU GLY GLU GLU ALA SEQRES 29 B 507 ALA PHE SER LEU MET GLY ARG HIS VAL ALA ARG ALA GLU SEQRES 30 B 507 GLU THR TYR TYR MET LEU GLY ALA ILE GLU GLY TRP LEU SEQRES 31 B 507 LYS GLU ILE LYS ALA GLY GLU ASP THR VAL VAL MET PRO SEQRES 32 B 507 ALA VAL PRO ALA SER ALA GLU GLY THR GLY PHE THR GLU SEQRES 33 B 507 ALA PRO ARG GLY SER LEU LEU HIS TYR VAL LYS VAL LYS SEQRES 34 B 507 ASP SER LYS ILE ASP ASN TYR GLN ILE VAL SER ALA SER SEQRES 35 B 507 LEU TRP ASN CYS ASN PRO ARG ASP ASP MET GLY GLN ARG SEQRES 36 B 507 GLY ALA VAL GLU GLU ALA LEU ILE GLY ILE PRO VAL ASP SEQRES 37 B 507 ASP ILE GLN ASN PRO VAL ASN VAL ALA ARG LEU ILE ARG SEQRES 38 B 507 ALA PHE ASP PRO CYS LEU GLY CYS ALA VAL HIS VAL LEU SEQRES 39 B 507 HIS ALA GLU SER GLY LYS VAL ALA VAL ILE GLU VAL LYS HET CSX B 75 22 HET CSD B 489 11 HET SF4 A 301 8 HET SF4 A 302 8 HET SF4 A 303 8 HET 6ML A 304 10 HET FCO B 601 7 HET NI B 602 1 HET FE2 B 603 1 HET H2S B 604 3 HETNAM CSX S-OXY CYSTEINE HETNAM CSD 3-SULFINOALANINE HETNAM SF4 IRON/SULFUR CLUSTER HETNAM 6ML OXYGEN-DAMAGED SF4 HETNAM FCO CARBONMONOXIDE-(DICYANO) IRON HETNAM NI NICKEL (II) ION HETNAM FE2 FE (II) ION HETNAM H2S HYDROSULFURIC ACID HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE HETSYN H2S HYDROGEN SULFIDE FORMUL 2 CSX C3 H7 N O3 S FORMUL 2 CSD C3 H7 N O4 S FORMUL 3 SF4 3(FE4 S4) FORMUL 6 6ML FE4 O2 S4 FORMUL 7 FCO C3 FE N2 O FORMUL 8 NI NI 2+ FORMUL 9 FE2 FE 2+ FORMUL 10 H2S H2 S FORMUL 11 HOH *758(H2 O) HELIX 1 AA1 THR A 19 ASN A 27 1 9 HELIX 2 AA2 SER A 32 VAL A 40 1 9 HELIX 3 AA3 GLU A 53 PHE A 68 1 16 HELIX 4 AA4 GLU A 83 LYS A 87 5 5 HELIX 5 AA5 MET A 101 GLY A 109 1 9 HELIX 6 AA6 GLY A 119 GLY A 125 1 7 HELIX 7 AA7 GLY A 126 ALA A 130 5 5 HELIX 8 AA8 ALA A 139 ASN A 147 1 9 HELIX 9 AA9 HIS A 162 LYS A 191 1 30 HELIX 10 AB1 PRO A 199 GLY A 204 1 6 HELIX 11 AB2 ILE A 207 CYS A 211 5 5 HELIX 12 AB3 TYR A 213 GLY A 220 1 8 HELIX 13 AB4 ARG A 233 GLY A 237 5 5 HELIX 14 AB5 LYS A 239 THR A 243 5 5 HELIX 15 AB6 ASP A 246 LYS A 251 1 6 HELIX 16 AB7 TRP A 258 ALA A 263 1 6 HELIX 17 AB8 PRO A 274 SER A 278 5 5 HELIX 18 AB9 GLY B 54 LEU B 59 1 6 HELIX 19 AC1 ASP B 63 ARG B 65 5 3 HELIX 20 AC2 ASP B 66 VAL B 71 1 6 HELIX 21 AC3 GLN B 72 CSX B 75 5 4 HELIX 22 AC4 CYS B 78 GLY B 95 1 18 HELIX 23 AC5 PRO B 99 LEU B 125 1 27 HELIX 24 AC6 SER B 126 PHE B 130 5 5 HELIX 25 AC7 SER B 151 GLY B 181 1 31 HELIX 26 AC8 THR B 199 LYS B 220 1 22 HELIX 27 AC9 LYS B 220 TYR B 232 1 13 HELIX 28 AD1 LYS B 233 LYS B 237 5 5 HELIX 29 AD2 ASP B 276 SER B 278 5 3 HELIX 30 AD3 ALA B 290 THR B 294 5 5 HELIX 31 AD4 ASN B 297 GLY B 301 5 5 HELIX 32 AD5 GLY B 329 ASN B 338 1 10 HELIX 33 AD6 SER B 342 GLY B 354 1 13 HELIX 34 AD7 LYS B 359 LEU B 363 5 5 HELIX 35 AD8 GLY B 364 PHE B 369 1 6 HELIX 36 AD9 SER B 370 ILE B 396 1 27 HELIX 37 AE1 SER B 443 ASN B 450 1 8 HELIX 38 AE2 GLY B 459 LEU B 465 1 7 HELIX 39 AE3 VAL B 477 PHE B 486 1 10 HELIX 40 AE4 CYS B 489 HIS B 495 1 7 SHEET 1 AA1 5 SER A 42 PHE A 45 0 SHEET 2 AA1 5 PRO A 9 GLN A 14 1 N TRP A 12 O PHE A 45 SHEET 3 AA1 5 PHE A 72 GLU A 77 1 O VAL A 75 N PHE A 11 SHEET 4 AA1 5 ALA A 112 VAL A 118 1 O ALA A 113 N PHE A 72 SHEET 5 AA1 5 VAL A 153 ILE A 156 1 O ILE A 156 N ALA A 117 SHEET 1 AA2 2 VAL A 80 PRO A 81 0 SHEET 2 AA2 2 ALA A 137 THR A 138 -1 O THR A 138 N VAL A 80 SHEET 1 AA3 2 ILE A 90 ALA A 94 0 SHEET 2 AA3 2 HIS A 97 SER A 100 -1 O ILE A 99 N GLY A 92 SHEET 1 AA4 3 ARG B 16 ILE B 21 0 SHEET 2 AA4 3 LEU B 31 GLU B 38 -1 O VAL B 37 N THR B 17 SHEET 3 AA4 3 LYS B 41 GLY B 49 -1 O VAL B 43 N VAL B 36 SHEET 1 AA5 2 GLN B 189 VAL B 190 0 SHEET 2 AA5 2 GLY B 193 ALA B 194 -1 O GLY B 193 N VAL B 190 SHEET 1 AA6 3 ALA B 245 CYS B 247 0 SHEET 2 AA6 3 GLY B 265 ALA B 268 -1 O TYR B 267 N ALA B 245 SHEET 3 AA6 3 LYS B 271 MET B 273 -1 O MET B 273 N VAL B 266 SHEET 1 AA7 2 ALA B 250 PRO B 252 0 SHEET 2 AA7 2 HIS B 260 PHE B 262 -1 O LEU B 261 N PHE B 251 SHEET 1 AA8 2 ILE B 280 TYR B 283 0 SHEET 2 AA8 2 ALA B 318 TYR B 321 -1 O ARG B 320 N LYS B 281 SHEET 1 AA9 3 ALA B 412 ALA B 420 0 SHEET 2 AA9 3 GLY B 423 LYS B 432 -1 O VAL B 431 N ALA B 412 SHEET 3 AA9 3 LYS B 435 VAL B 442 -1 O ASP B 437 N LYS B 430 SSBOND 1 CYS B 75 CYS B 78 1555 1555 2.03 SSBOND 2 CSX B 75 CSD B 489 1555 1555 2.99 LINK SG BCYS A 21 S1 B6ML A 304 1555 1555 1.88 LINK C ILE B 74 N ACSX B 75 1555 1555 1.33 LINK C ILE B 74 N BCSX B 75 1555 1555 1.32 LINK C ACSX B 75 N GLY B 76 1555 1555 1.32 LINK C BCSX B 75 N GLY B 76 1555 1555 1.33 LINK C PRO B 488 N BCSD B 489 1555 1555 1.33 LINK C BCSD B 489 N LEU B 490 1555 1555 1.33 LINK SG CYS A 18 FE1 ASF4 A 303 1555 1555 2.33 LINK SG CYS A 18 FE1 B6ML A 304 1555 1555 2.09 LINK SG ACYS A 21 FE4 ASF4 A 303 1555 1555 2.23 LINK OE2BGLU A 77 FE2 B6ML A 304 1555 1555 2.04 LINK SG CYS A 121 FE2 ASF4 A 303 1555 1555 2.36 LINK SG CYS A 121 FE4 B6ML A 304 1555 1555 2.06 LINK SG CYS A 159 FE3 ASF4 A 303 1555 1555 2.34 LINK SG CYS A 159 FE3 B6ML A 304 1555 1555 2.31 LINK ND1 HIS A 208 FE2 SF4 A 301 1555 1555 2.07 LINK SG CYS A 211 FE4 SF4 A 301 1555 1555 2.29 LINK SG CYS A 232 FE3 SF4 A 301 1555 1555 2.30 LINK SG CYS A 238 FE1 SF4 A 301 1555 1555 2.32 LINK SG CYS A 247 FE4 SF4 A 302 1555 1555 2.29 LINK SG CYS A 259 FE3 SF4 A 302 1555 1555 2.27 LINK SG CYS A 265 FE2 SF4 A 302 1555 1555 2.30 LINK SG CYS A 268 FE1 SF4 A 302 1555 1555 2.30 LINK OE2 GLU B 56 FE FE2 B 603 1555 1555 2.15 LINK SG ACSX B 75 NI A NI B 602 1555 1555 2.24 LINK SG CYS B 78 FE FCO B 601 1555 1555 2.25 LINK SG CYS B 78 NI A NI B 602 1555 1555 2.33 LINK O ILE B 441 FE FE2 B 603 1555 1555 2.20 LINK SG ACYS B 489 NI A NI B 602 1555 1555 2.48 LINK SG CYS B 492 FE FCO B 601 1555 1555 2.31 LINK SG CYS B 492 NI A NI B 602 1555 1555 2.62 LINK NE2 HIS B 495 FE FE2 B 603 1555 1555 2.11 LINK FE FCO B 601 O AHOH B1056 1555 1555 2.16 LINK FE FE2 B 603 O HOH B 713 1555 1555 2.15 LINK FE FE2 B 603 O HOH B 720 1555 1555 2.22 LINK FE FE2 B 603 O HOH B 741 1555 1555 2.12 CISPEP 1 HIS A 30 PRO A 31 0 5.12 CISPEP 2 HIS A 30 PRO A 31 0 -7.34 CISPEP 3 CYS A 159 PRO A 160 0 -2.22 CISPEP 4 PHE A 273 PRO A 274 0 6.72 CISPEP 5 SER A 278 PRO A 279 0 -3.61 CISPEP 6 ASP B 22 PRO B 23 0 5.39 CISPEP 7 ALA B 137 PRO B 138 0 4.61 CISPEP 8 VAL B 140 PRO B 141 0 -5.21 CISPEP 9 MET B 183 PRO B 184 0 -4.44 SITE 1 AC1 8 HIS A 208 CYS A 211 TYR A 213 LEU A 214 SITE 2 AC1 8 CYS A 232 ARG A 233 CYS A 238 VAL A 260 SITE 1 AC2 9 THR A 243 CYS A 247 TRP A 252 CYS A 259 SITE 2 AC2 9 CYS A 265 ILE A 266 CYS A 268 ARG B 182 SITE 3 AC2 9 GLN B 187 SITE 1 AC3 12 GLY A 17 CYS A 18 CYS A 21 GLU A 77 SITE 2 AC3 12 GLY A 119 THR A 120 CYS A 121 GLY A 158 SITE 3 AC3 12 CYS A 159 6ML A 304 ARG B 73 HIS B 185 SITE 1 AC4 13 CYS A 18 THR A 19 GLY A 20 CYS A 21 SITE 2 AC4 13 GLU A 77 THR A 120 CYS A 121 GLY A 158 SITE 3 AC4 13 CYS A 159 PRO A 160 SF4 A 303 HOH A 422 SITE 4 AC4 13 HIS B 185 SITE 1 AC5 13 CYS B 75 CYS B 78 HIS B 82 ALA B 420 SITE 2 AC5 13 PRO B 421 ARG B 422 ALA B 444 SER B 445 SITE 3 AC5 13 CYS B 489 CSD B 489 CYS B 492 NI B 602 SITE 4 AC5 13 HOH B1056 SITE 1 AC6 8 CSX B 75 CYS B 75 CYS B 78 CSD B 489 SITE 2 AC6 8 CYS B 489 CYS B 492 FCO B 601 HOH B1056 SITE 1 AC7 6 GLU B 56 ILE B 441 HIS B 495 HOH B 713 SITE 2 AC7 6 HOH B 720 HOH B 741 SITE 1 AC8 6 CYS B 78 THR B 80 ALA B 81 PHE B 110 SITE 2 AC8 6 ASN B 113 PRO B 421 CRYST1 106.778 63.183 110.664 90.00 105.27 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009365 0.000000 0.002556 0.00000 SCALE2 0.000000 0.015827 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009367 0.00000