HEADER ALLERGEN 09-MAY-16 5JT8 TITLE STRUCTURAL BASIS FOR THE LIMITED ANTIBODY CROSS REACTIVITY BETWEEN THE TITLE 2 MITE ALLERGENS BLO T 1 AND DER P 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BLO T 1 ALLERGEN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BLOMIA TROPICALIS; SOURCE 3 ORGANISM_COMMON: MITE; SOURCE 4 ORGANISM_TAXID: 40697; SOURCE 5 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4922 KEYWDS ALLERGEN MITE, ALLERGEN EXPDTA X-RAY DIFFRACTION AUTHOR K.MENO,J.S.KASTRUP,M.GAJHEDE REVDAT 5 10-JAN-24 5JT8 1 HETSYN REVDAT 4 29-JUL-20 5JT8 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 16-OCT-19 5JT8 1 REMARK REVDAT 2 05-DEC-18 5JT8 1 JRNL REVDAT 1 24-MAY-17 5JT8 0 JRNL AUTH K.H.MENO,J.S.KASTRUP,I.C.KUO,K.Y.CHUA,M.GAJHEDE JRNL TITL THE STRUCTURE OF THE MITE ALLERGEN BLO T 1 EXPLAINS THE JRNL TITL 2 LIMITED ANTIBODY CROSS-REACTIVITY TO DER P 1. JRNL REF ALLERGY V. 72 665 2017 JRNL REFN ESSN 1398-9995 JRNL PMID 27997997 JRNL DOI 10.1111/ALL.13111 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.060 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 79280 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 3981 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 55.4870 - 6.3738 0.99 2666 138 0.1555 0.1866 REMARK 3 2 6.3738 - 5.0601 1.00 2645 174 0.1562 0.1863 REMARK 3 3 5.0601 - 4.4208 1.00 2740 122 0.1301 0.1561 REMARK 3 4 4.4208 - 4.0167 1.00 2669 160 0.1301 0.1619 REMARK 3 5 4.0167 - 3.7289 1.00 2704 168 0.1408 0.1755 REMARK 3 6 3.7289 - 3.5091 1.00 2615 154 0.1542 0.2017 REMARK 3 7 3.5091 - 3.3334 1.00 2726 126 0.1674 0.2109 REMARK 3 8 3.3334 - 3.1883 1.00 2706 134 0.1748 0.2678 REMARK 3 9 3.1883 - 3.0656 1.00 2743 120 0.1823 0.2543 REMARK 3 10 3.0656 - 2.9598 1.00 2652 140 0.1890 0.2335 REMARK 3 11 2.9598 - 2.8672 1.00 2702 130 0.1857 0.2284 REMARK 3 12 2.8672 - 2.7853 1.00 2661 136 0.1891 0.2664 REMARK 3 13 2.7853 - 2.7120 1.00 2736 135 0.1774 0.2248 REMARK 3 14 2.7120 - 2.6458 1.00 2719 148 0.1815 0.2491 REMARK 3 15 2.6458 - 2.5857 1.00 2676 142 0.1700 0.2254 REMARK 3 16 2.5857 - 2.5306 1.00 2640 127 0.1787 0.2204 REMARK 3 17 2.5306 - 2.4800 1.00 2781 137 0.1943 0.3096 REMARK 3 18 2.4800 - 2.4332 1.00 2676 128 0.1888 0.2201 REMARK 3 19 2.4332 - 2.3898 1.00 2652 132 0.2029 0.2939 REMARK 3 20 2.3898 - 2.3492 1.00 2723 174 0.2006 0.2616 REMARK 3 21 2.3492 - 2.3114 1.00 2609 143 0.2217 0.2856 REMARK 3 22 2.3114 - 2.2758 1.00 2795 124 0.2120 0.2982 REMARK 3 23 2.2758 - 2.2423 1.00 2659 160 0.2069 0.2416 REMARK 3 24 2.2423 - 2.2107 1.00 2687 154 0.2135 0.2309 REMARK 3 25 2.2107 - 2.1809 1.00 2602 142 0.2247 0.2740 REMARK 3 26 2.1809 - 2.1525 1.00 2751 142 0.2339 0.3277 REMARK 3 27 2.1525 - 2.1256 1.00 2624 143 0.2357 0.2700 REMARK 3 28 2.1256 - 2.1000 1.00 2740 148 0.2575 0.3037 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5292 REMARK 3 ANGLE : 1.029 7163 REMARK 3 CHIRALITY : 0.045 704 REMARK 3 PLANARITY : 0.004 949 REMARK 3 DIHEDRAL : 16.309 1889 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 27.1992 16.7066 -26.5859 REMARK 3 T TENSOR REMARK 3 T11: 0.1547 T22: 0.2705 REMARK 3 T33: 0.2195 T12: -0.0894 REMARK 3 T13: 0.0314 T23: -0.0390 REMARK 3 L TENSOR REMARK 3 L11: 1.1392 L22: 2.1009 REMARK 3 L33: 1.3726 L12: -1.0417 REMARK 3 L13: 0.3695 L23: -0.3167 REMARK 3 S TENSOR REMARK 3 S11: -0.0677 S12: 0.1133 S13: 0.0559 REMARK 3 S21: 0.0154 S22: 0.0067 S23: -0.3022 REMARK 3 S31: -0.0574 S32: 0.0741 S33: 0.0479 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JT8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221203. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAY-06 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 79280 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 55.486 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 17.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1XKG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SINGLE CRYSTALS WERE OBTAINED WITH REMARK 280 DROPS CONTAINING 4 UL SAMPLE SOLUTION CONTAINING 1 MG/ML RPROBLO REMARK 280 T 1, 0.5 MM YCL3, AND 10 MM TRIS-HCL PH 8.0, AND 2 UL RESERVOIR REMARK 280 SOLUTION CONTAINING 4% W/V PEG-6000, 0.1 M NA-HEPES PH 6.6 AND REMARK 280 0.8 M LINO3, VAPOR DIFFUSION, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 58.70600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.89392 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 44.12133 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 58.70600 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 33.89392 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 44.12133 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 58.70600 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 33.89392 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 44.12133 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 67.78785 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 88.24267 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 67.78785 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 88.24267 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 67.78785 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 88.24267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -17 REMARK 465 LYS A -16 REMARK 465 PHE A -15 REMARK 465 LEU A -14 REMARK 465 LEU A -13 REMARK 465 VAL A -12 REMARK 465 ALA A -11 REMARK 465 ALA A -10 REMARK 465 LEU A -9 REMARK 465 CYS A -8 REMARK 465 ALA A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 ALA A -4 REMARK 465 ILE A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 CYS A 0 REMARK 465 LYS A 1 REMARK 465 PRO A 2 REMARK 465 THR A 3 REMARK 465 ARG A 4 REMARK 465 GLU A 5 REMARK 465 MET B -17 REMARK 465 LYS B -16 REMARK 465 PHE B -15 REMARK 465 LEU B -14 REMARK 465 LEU B -13 REMARK 465 VAL B -12 REMARK 465 ALA B -11 REMARK 465 ALA B -10 REMARK 465 LEU B -9 REMARK 465 CYS B -8 REMARK 465 ALA B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 ALA B -4 REMARK 465 ILE B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 CYS B 0 REMARK 465 LYS B 1 REMARK 465 PRO B 2 REMARK 465 THR B 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 115 OG REMARK 470 SER B 115 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 224 OH TYR B 224 2.00 REMARK 500 O2 NO3 B 405 O HOH B 501 2.01 REMARK 500 O HOH B 519 O HOH B 540 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASN A 190 NH2 ARG B 22 2655 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 9 -169.04 -162.42 REMARK 500 SER A 58 0.30 -66.29 REMARK 500 SER A 70 30.29 -140.12 REMARK 500 ASN A 90 46.52 -93.23 REMARK 500 SER A 166 162.11 178.13 REMARK 500 ASP A 199 38.08 -93.83 REMARK 500 HIS A 301 15.57 -144.79 REMARK 500 GLU B 6 133.36 -39.16 REMARK 500 SER B 70 42.28 -153.48 REMARK 500 ASN B 90 44.39 -89.80 REMARK 500 THR B 179 -38.89 -132.01 REMARK 500 TYR B 187 77.88 -154.31 REMARK 500 ASP B 262 9.61 -155.52 REMARK 500 HIS B 301 12.25 -147.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 666 DISTANCE = 6.85 ANGSTROMS DBREF 5JT8 A -17 315 UNP A1KXI0 A1KXI0_BLOTA 1 333 DBREF 5JT8 B -17 315 UNP A1KXI0 A1KXI0_BLOTA 1 333 SEQADV 5JT8 PRO A 157 UNP A1KXI0 SER 175 CONFLICT SEQADV 5JT8 ARG A 185 UNP A1KXI0 GLU 203 CONFLICT SEQADV 5JT8 ASP A 197 UNP A1KXI0 ASN 215 CONFLICT SEQADV 5JT8 HIS A 216 UNP A1KXI0 GLN 234 CONFLICT SEQADV 5JT8 TYR A 309 UNP A1KXI0 PHE 327 CONFLICT SEQADV 5JT8 PRO B 157 UNP A1KXI0 SER 175 CONFLICT SEQADV 5JT8 ARG B 185 UNP A1KXI0 GLU 203 CONFLICT SEQADV 5JT8 ASP B 197 UNP A1KXI0 ASN 215 CONFLICT SEQADV 5JT8 HIS B 216 UNP A1KXI0 GLN 234 CONFLICT SEQADV 5JT8 TYR B 309 UNP A1KXI0 PHE 327 CONFLICT SEQRES 1 A 333 MET LYS PHE LEU LEU VAL ALA ALA LEU CYS ALA LEU VAL SEQRES 2 A 333 ALA ILE GLY SER CYS LYS PRO THR ARG GLU GLU ILE LYS SEQRES 3 A 333 THR PHE GLU GLN PHE LYS LYS VAL PHE GLY LYS VAL TYR SEQRES 4 A 333 ARG ASN ALA GLU GLU GLU ALA ARG ARG GLU HIS HIS PHE SEQRES 5 A 333 LYS GLU GLN LEU LYS TRP VAL GLU GLU HIS ASN GLY ILE SEQRES 6 A 333 ASP GLY VAL GLU TYR ALA ILE ASN GLU TYR SER ASP MET SEQRES 7 A 333 SER GLU GLN GLU PHE SER PHE HIS LEU SER GLY GLY GLY SEQRES 8 A 333 LEU ASN PHE THR TYR MET LYS MET GLU ALA ALA LYS GLU SEQRES 9 A 333 PRO LEU ILE ASN THR TYR GLY SER LEU PRO GLN ASN PHE SEQRES 10 A 333 ASP TRP ARG GLN LYS ALA ARG LEU THR ARG ILE ARG GLN SEQRES 11 A 333 GLN GLY SER CYS GLY SER CSO TRP ALA PHE ALA ALA ALA SEQRES 12 A 333 GLY VAL ALA GLU SER LEU TYR SER ILE GLN LYS GLN GLN SEQRES 13 A 333 SER ILE GLU LEU SER GLU GLN GLU LEU VAL ASP CYS THR SEQRES 14 A 333 TYR ASN ARG TYR ASP PRO SER TYR GLN CYS ASN GLY CYS SEQRES 15 A 333 GLY SER GLY TYR SER THR GLU ALA PHE LYS TYR MET ILE SEQRES 16 A 333 ARG THR GLY LEU VAL GLU GLU ARG ASN TYR PRO TYR ASN SEQRES 17 A 333 MET ARG THR GLN TRP CYS ASP PRO ASP VAL GLU GLY GLN SEQRES 18 A 333 ARG TYR HIS VAL SER GLY TYR GLN GLN LEU ARG TYR HIS SEQRES 19 A 333 SER SER ASP GLU ASP VAL MET TYR THR ILE GLN GLN HIS SEQRES 20 A 333 GLY PRO VAL VAL ILE TYR MET HIS GLY SER ASN ASN TYR SEQRES 21 A 333 PHE ARG ASN LEU GLY ASN GLY VAL LEU ARG GLY VAL ALA SEQRES 22 A 333 TYR ASN ASP ALA TYR THR ASP HIS ALA VAL ILE LEU VAL SEQRES 23 A 333 GLY TRP GLY THR VAL GLN GLY VAL ASP TYR TRP ILE ILE SEQRES 24 A 333 ARG ASN SER TRP GLY THR GLY TRP GLY ASN GLY GLY TYR SEQRES 25 A 333 GLY TYR VAL GLU ARG GLY HIS ASN SER LEU GLY ILE ASN SEQRES 26 A 333 ASN TYR VAL THR TYR ALA THR LEU SEQRES 1 B 333 MET LYS PHE LEU LEU VAL ALA ALA LEU CYS ALA LEU VAL SEQRES 2 B 333 ALA ILE GLY SER CYS LYS PRO THR ARG GLU GLU ILE LYS SEQRES 3 B 333 THR PHE GLU GLN PHE LYS LYS VAL PHE GLY LYS VAL TYR SEQRES 4 B 333 ARG ASN ALA GLU GLU GLU ALA ARG ARG GLU HIS HIS PHE SEQRES 5 B 333 LYS GLU GLN LEU LYS TRP VAL GLU GLU HIS ASN GLY ILE SEQRES 6 B 333 ASP GLY VAL GLU TYR ALA ILE ASN GLU TYR SER ASP MET SEQRES 7 B 333 SER GLU GLN GLU PHE SER PHE HIS LEU SER GLY GLY GLY SEQRES 8 B 333 LEU ASN PHE THR TYR MET LYS MET GLU ALA ALA LYS GLU SEQRES 9 B 333 PRO LEU ILE ASN THR TYR GLY SER LEU PRO GLN ASN PHE SEQRES 10 B 333 ASP TRP ARG GLN LYS ALA ARG LEU THR ARG ILE ARG GLN SEQRES 11 B 333 GLN GLY SER CYS GLY SER CSO TRP ALA PHE ALA ALA ALA SEQRES 12 B 333 GLY VAL ALA GLU SER LEU TYR SER ILE GLN LYS GLN GLN SEQRES 13 B 333 SER ILE GLU LEU SER GLU GLN GLU LEU VAL ASP CYS THR SEQRES 14 B 333 TYR ASN ARG TYR ASP PRO SER TYR GLN CYS ASN GLY CYS SEQRES 15 B 333 GLY SER GLY TYR SER THR GLU ALA PHE LYS TYR MET ILE SEQRES 16 B 333 ARG THR GLY LEU VAL GLU GLU ARG ASN TYR PRO TYR ASN SEQRES 17 B 333 MET ARG THR GLN TRP CYS ASP PRO ASP VAL GLU GLY GLN SEQRES 18 B 333 ARG TYR HIS VAL SER GLY TYR GLN GLN LEU ARG TYR HIS SEQRES 19 B 333 SER SER ASP GLU ASP VAL MET TYR THR ILE GLN GLN HIS SEQRES 20 B 333 GLY PRO VAL VAL ILE TYR MET HIS GLY SER ASN ASN TYR SEQRES 21 B 333 PHE ARG ASN LEU GLY ASN GLY VAL LEU ARG GLY VAL ALA SEQRES 22 B 333 TYR ASN ASP ALA TYR THR ASP HIS ALA VAL ILE LEU VAL SEQRES 23 B 333 GLY TRP GLY THR VAL GLN GLY VAL ASP TYR TRP ILE ILE SEQRES 24 B 333 ARG ASN SER TRP GLY THR GLY TRP GLY ASN GLY GLY TYR SEQRES 25 B 333 GLY TYR VAL GLU ARG GLY HIS ASN SER LEU GLY ILE ASN SEQRES 26 B 333 ASN TYR VAL THR TYR ALA THR LEU MODRES 5JT8 CSO A 119 CYS MODIFIED RESIDUE MODRES 5JT8 CSO B 119 CYS MODIFIED RESIDUE HET CSO A 119 7 HET CSO B 119 7 HET NAG C 1 14 HET NAG C 2 14 HET NAG A 401 14 HET CL A 402 1 HET CL A 403 1 HET NO3 A 404 4 HET NO3 A 405 4 HET NO3 A 406 4 HET NO3 A 407 4 HET CL B 403 1 HET CL B 404 1 HET NO3 B 405 4 HET NO3 B 406 4 HETNAM CSO S-HYDROXYCYSTEINE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CL CHLORIDE ION HETNAM NO3 NITRATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 1 CSO 2(C3 H7 N O3 S) FORMUL 3 NAG 3(C8 H15 N O6) FORMUL 5 CL 4(CL 1-) FORMUL 7 NO3 6(N O3 1-) FORMUL 15 HOH *306(H2 O) HELIX 1 AA1 THR A 9 PHE A 17 1 9 HELIX 2 AA2 ASN A 23 ASN A 45 1 23 HELIX 3 AA3 GLY A 46 VAL A 50 5 5 HELIX 4 AA4 SER A 61 GLY A 71 1 11 HELIX 5 AA5 ASN A 75 ALA A 83 1 9 HELIX 6 AA6 TRP A 101 ALA A 105 1 5 HELIX 7 AA7 SER A 118 GLN A 137 1 20 HELIX 8 AA8 SER A 143 THR A 151 1 9 HELIX 9 AA9 TYR A 168 THR A 179 1 12 HELIX 10 AB1 GLU A 183 TYR A 187 5 5 HELIX 11 AB2 SER A 218 GLY A 230 1 13 HELIX 12 AB3 ASN A 240 ASN A 245 1 6 HELIX 13 AB4 ASN A 302 ILE A 306 5 5 HELIX 14 AB5 THR B 9 PHE B 17 1 9 HELIX 15 AB6 ASN B 23 ASN B 45 1 23 HELIX 16 AB7 GLY B 46 VAL B 50 5 5 HELIX 17 AB8 SER B 61 GLY B 71 1 11 HELIX 18 AB9 ASN B 75 ALA B 83 1 9 HELIX 19 AC1 TRP B 101 ALA B 105 1 5 HELIX 20 AC2 SER B 118 GLN B 137 1 20 HELIX 21 AC3 SER B 143 THR B 151 1 9 HELIX 22 AC4 TYR B 168 THR B 179 1 12 HELIX 23 AC5 GLU B 183 TYR B 187 5 5 HELIX 24 AC6 SER B 218 GLY B 230 1 13 HELIX 25 AC7 ASN B 240 LEU B 246 1 7 HELIX 26 AC8 ASN B 302 ILE B 306 5 5 SHEET 1 AA1 3 PHE A 99 ASP A 100 0 SHEET 2 AA1 3 HIS A 263 VAL A 273 -1 O TRP A 270 N PHE A 99 SHEET 3 AA1 3 VAL A 232 MET A 236 -1 N MET A 236 O HIS A 263 SHEET 1 AA2 5 PHE A 99 ASP A 100 0 SHEET 2 AA2 5 HIS A 263 VAL A 273 -1 O TRP A 270 N PHE A 99 SHEET 3 AA2 5 VAL A 276 ARG A 282 -1 O ARG A 282 N ILE A 266 SHEET 4 AA2 5 TYR A 294 GLU A 298 -1 O VAL A 297 N TRP A 279 SHEET 5 AA2 5 VAL A 250 LEU A 251 1 N LEU A 251 O TYR A 296 SHEET 1 AA3 2 GLY A 209 GLN A 212 0 SHEET 2 AA3 2 THR A 311 THR A 314 -1 O THR A 314 N GLY A 209 SHEET 1 AA4 3 PHE B 99 ASP B 100 0 SHEET 2 AA4 3 HIS B 263 VAL B 273 -1 O TRP B 270 N PHE B 99 SHEET 3 AA4 3 VAL B 232 MET B 236 -1 N MET B 236 O HIS B 263 SHEET 1 AA5 5 PHE B 99 ASP B 100 0 SHEET 2 AA5 5 HIS B 263 VAL B 273 -1 O TRP B 270 N PHE B 99 SHEET 3 AA5 5 VAL B 276 ARG B 282 -1 O ARG B 282 N ILE B 266 SHEET 4 AA5 5 TYR B 294 GLU B 298 -1 O GLY B 295 N ILE B 281 SHEET 5 AA5 5 VAL B 250 LEU B 251 1 N LEU B 251 O TYR B 296 SHEET 1 AA6 2 GLY B 209 GLN B 212 0 SHEET 2 AA6 2 THR B 311 THR B 314 -1 O THR B 314 N GLY B 209 SSBOND 1 CYS A 116 CYS A 164 1555 1555 2.04 SSBOND 2 CYS A 150 CYS A 196 1555 1555 2.04 SSBOND 3 CYS B 116 CYS B 164 1555 1555 2.02 SSBOND 4 CYS B 150 CYS B 196 1555 1555 2.03 LINK ND2 ASN A 75 C1 NAG A 401 1555 1555 1.45 LINK C SER A 118 N CSO A 119 1555 1555 1.33 LINK C CSO A 119 N TRP A 120 1555 1555 1.33 LINK ND2 ASN B 75 C1 NAG C 1 1555 1555 1.44 LINK C SER B 118 N CSO B 119 1555 1555 1.33 LINK C CSO B 119 N TRP B 120 1555 1555 1.33 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.45 CRYST1 117.412 117.412 132.364 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008517 0.004917 0.000000 0.00000 SCALE2 0.000000 0.009835 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007555 0.00000