HEADER HYDROLASE 09-MAY-16 5JTA TITLE NEUTRAL TREHALASE NTH1 FROM SACCHAROMYCES CEREVISIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEUTRAL TREHALASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ALPHA,ALPHA-TREHALASE,ALPHA-TREHALOSE GLUCOHYDROLASE; COMPND 5 EC: 3.2.1.28; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: NTH1, NTH, YDR001C, YD8119.07C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TREHALASE, GLYCOSIDASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.ALBLOVA,A.SMIDOVA,V.OBSILOVA,T.OBSIL REVDAT 5 01-MAY-24 5JTA 1 REMARK REVDAT 4 31-JAN-18 5JTA 1 REMARK REVDAT 3 22-NOV-17 5JTA 1 JRNL REVDAT 2 08-NOV-17 5JTA 1 JRNL REVDAT 1 01-NOV-17 5JTA 0 JRNL AUTH M.ALBLOVA,A.SMIDOVA,V.DOCEKAL,J.VESELY,P.HERMAN,V.OBSILOVA, JRNL AUTH 2 T.OBSIL JRNL TITL MOLECULAR BASIS OF THE 14-3-3 PROTEIN-DEPENDENT ACTIVATION JRNL TITL 2 OF YEAST NEUTRAL TREHALASE NTH1. JRNL REF PROC. NATL. ACAD. SCI. V. 114 E9811 2017 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 29087344 JRNL DOI 10.1073/PNAS.1714491114 REMARK 2 REMARK 2 RESOLUTION. 2.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.15 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 31910 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1680 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.72 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2314 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.88 REMARK 3 BIN R VALUE (WORKING SET) : 0.3830 REMARK 3 BIN FREE R VALUE SET COUNT : 122 REMARK 3 BIN FREE R VALUE : 0.3710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4379 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 21 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 52.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.85000 REMARK 3 B22 (A**2) : 1.85000 REMARK 3 B33 (A**2) : -6.00000 REMARK 3 B12 (A**2) : 0.93000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.217 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.267 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.000 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.002 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.896 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5JTA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221207. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-SEP-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918409 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33613 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.720 REMARK 200 RESOLUTION RANGE LOW (A) : 49.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.040 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PRELIMINARY MODEL OBTAINED FROM SAD EXPERIMENT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM CITRATE, AMMONIUM SULFATE, REMARK 280 LITHIUM SULFATE, PH 7.3, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.91333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 39.95667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 79.91333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 39.95667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 79.91333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 39.95667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 79.91333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 39.95667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLN A 3 REMARK 465 VAL A 4 REMARK 465 ASN A 5 REMARK 465 THR A 6 REMARK 465 SER A 7 REMARK 465 GLN A 8 REMARK 465 GLY A 9 REMARK 465 PRO A 10 REMARK 465 VAL A 11 REMARK 465 ALA A 12 REMARK 465 GLN A 13 REMARK 465 GLY A 14 REMARK 465 ARG A 15 REMARK 465 GLN A 16 REMARK 465 ARG A 17 REMARK 465 ARG A 18 REMARK 465 LEU A 19 REMARK 465 SER A 20 REMARK 465 SER A 21 REMARK 465 LEU A 22 REMARK 465 SER A 23 REMARK 465 GLU A 24 REMARK 465 PHE A 25 REMARK 465 ASN A 26 REMARK 465 ASP A 27 REMARK 465 PRO A 28 REMARK 465 PHE A 29 REMARK 465 SER A 30 REMARK 465 ASN A 31 REMARK 465 ALA A 32 REMARK 465 GLU A 33 REMARK 465 VAL A 34 REMARK 465 TYR A 35 REMARK 465 TYR A 36 REMARK 465 GLY A 37 REMARK 465 PRO A 38 REMARK 465 PRO A 39 REMARK 465 THR A 40 REMARK 465 ASP A 41 REMARK 465 PRO A 42 REMARK 465 ARG A 43 REMARK 465 LYS A 44 REMARK 465 GLN A 45 REMARK 465 LYS A 46 REMARK 465 GLN A 47 REMARK 465 ALA A 48 REMARK 465 LYS A 49 REMARK 465 PRO A 50 REMARK 465 ALA A 51 REMARK 465 LYS A 52 REMARK 465 ILE A 53 REMARK 465 ASN A 54 REMARK 465 ARG A 55 REMARK 465 THR A 56 REMARK 465 ARG A 57 REMARK 465 THR A 58 REMARK 465 MET A 59 REMARK 465 SER A 60 REMARK 465 VAL A 61 REMARK 465 PHE A 62 REMARK 465 ASP A 63 REMARK 465 ASN A 64 REMARK 465 VAL A 65 REMARK 465 SER A 66 REMARK 465 PRO A 67 REMARK 465 PHE A 68 REMARK 465 LYS A 69 REMARK 465 LYS A 70 REMARK 465 THR A 71 REMARK 465 GLY A 72 REMARK 465 PHE A 73 REMARK 465 GLY A 74 REMARK 465 LYS A 75 REMARK 465 LEU A 76 REMARK 465 GLN A 77 REMARK 465 GLN A 78 REMARK 465 THR A 79 REMARK 465 ARG A 80 REMARK 465 ARG A 81 REMARK 465 GLY A 82 REMARK 465 SER A 83 REMARK 465 GLU A 84 REMARK 465 ASP A 85 REMARK 465 ASP A 86 REMARK 465 THR A 87 REMARK 465 TYR A 88 REMARK 465 SER A 89 REMARK 465 SER A 90 REMARK 465 SER A 91 REMARK 465 GLN A 92 REMARK 465 GLY A 93 REMARK 465 ASN A 94 REMARK 465 ARG A 95 REMARK 465 ARG A 96 REMARK 465 PHE A 97 REMARK 465 PHE A 98 REMARK 465 ILE A 99 REMARK 465 GLU A 100 REMARK 465 ASP A 101 REMARK 465 VAL A 102 REMARK 465 ASP A 103 REMARK 465 LYS A 104 REMARK 465 THR A 105 REMARK 465 LEU A 106 REMARK 465 ASN A 107 REMARK 465 GLU A 108 REMARK 465 LEU A 109 REMARK 465 LEU A 110 REMARK 465 ALA A 111 REMARK 465 ALA A 112 REMARK 465 GLU A 113 REMARK 465 ASP A 114 REMARK 465 THR A 115 REMARK 465 ASP A 116 REMARK 465 LYS A 117 REMARK 465 ASN A 118 REMARK 465 TYR A 119 REMARK 465 GLN A 120 REMARK 465 ILE A 121 REMARK 465 THR A 122 REMARK 465 ILE A 123 REMARK 465 GLU A 124 REMARK 465 ASP A 125 REMARK 465 THR A 126 REMARK 465 GLY A 127 REMARK 465 PRO A 128 REMARK 465 LYS A 129 REMARK 465 VAL A 130 REMARK 465 LEU A 131 REMARK 465 LYS A 132 REMARK 465 VAL A 133 REMARK 465 GLY A 134 REMARK 465 THR A 135 REMARK 465 ALA A 136 REMARK 465 ASN A 137 REMARK 465 SER A 138 REMARK 465 TYR A 139 REMARK 465 GLY A 140 REMARK 465 TYR A 141 REMARK 465 LYS A 142 REMARK 465 HIS A 143 REMARK 465 ILE A 144 REMARK 465 ASN A 145 REMARK 465 ILE A 146 REMARK 465 ARG A 147 REMARK 465 GLY A 148 REMARK 465 THR A 149 REMARK 465 TYR A 150 REMARK 465 MET A 151 REMARK 465 LEU A 152 REMARK 465 SER A 153 REMARK 465 ASN A 154 REMARK 465 LEU A 155 REMARK 465 LEU A 156 REMARK 465 GLN A 157 REMARK 465 GLU A 158 REMARK 465 LEU A 159 REMARK 465 THR A 160 REMARK 465 ILE A 161 REMARK 465 ALA A 162 REMARK 465 LYS A 163 REMARK 465 SER A 164 REMARK 465 PHE A 165 REMARK 465 GLY A 166 REMARK 465 ARG A 167 REMARK 465 HIS A 168 REMARK 465 GLN A 169 REMARK 465 ILE A 170 REMARK 465 PHE A 171 REMARK 465 LEU A 172 REMARK 465 ASP A 173 REMARK 465 GLU A 174 REMARK 465 ALA A 175 REMARK 465 ARG A 176 REMARK 465 ILE A 177 REMARK 465 ASN A 178 REMARK 465 ARG A 680 REMARK 465 GLY A 681 REMARK 465 THR A 682 REMARK 465 ASP A 683 REMARK 465 PRO A 684 REMARK 465 HIS A 685 REMARK 465 ARG A 686 REMARK 465 VAL A 687 REMARK 465 GLU A 688 REMARK 465 ALA A 689 REMARK 465 GLU A 690 REMARK 465 TYR A 691 REMARK 465 GLY A 692 REMARK 465 ASN A 693 REMARK 465 GLN A 694 REMARK 465 GLY A 695 REMARK 465 ALA A 696 REMARK 465 ASP A 697 REMARK 465 PHE A 698 REMARK 465 LYS A 699 REMARK 465 GLY A 700 REMARK 465 ALA A 701 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 184 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 208 CG CD OE1 OE2 REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 LYS A 214 CE NZ REMARK 470 LYS A 221 CG CD CE NZ REMARK 470 GLU A 236 CG CD OE1 OE2 REMARK 470 LYS A 249 CD CE NZ REMARK 470 GLU A 262 CG CD OE1 OE2 REMARK 470 ARG A 302 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 370 CG CD CE NZ REMARK 470 SER A 402 OG REMARK 470 LYS A 440 CD CE NZ REMARK 470 LYS A 458 CD CE NZ REMARK 470 LYS A 461 CD CE NZ REMARK 470 LYS A 511 CD CE NZ REMARK 470 LYS A 517 CG CD CE NZ REMARK 470 LYS A 561 CD CE NZ REMARK 470 GLN A 588 CG CD OE1 NE2 REMARK 470 SER A 618 OG REMARK 470 TYR A 668 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN A 669 CG OD1 ND2 REMARK 470 ILE A 671 CG1 CG2 CD1 REMARK 470 GLU A 674 CD OE1 OE2 REMARK 470 LYS A 675 CG CD CE NZ REMARK 470 GLU A 704 CG CD OE1 OE2 REMARK 470 ARG A 742 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 677 OG1 THR A 679 1.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 246 C - N - CD ANGL. DEV. = 12.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 191 -79.88 -112.62 REMARK 500 LYS A 249 39.64 72.18 REMARK 500 THR A 270 61.29 -111.43 REMARK 500 LYS A 323 55.21 -106.89 REMARK 500 SER A 356 -159.86 -113.96 REMARK 500 VAL A 398 -66.07 -103.24 REMARK 500 THR A 400 40.58 -109.75 REMARK 500 SER A 402 -124.80 47.52 REMARK 500 LYS A 458 69.12 -117.28 REMARK 500 HIS A 477 74.04 -103.54 REMARK 500 TRP A 624 39.21 -94.54 REMARK 500 TYR A 668 36.58 -89.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5M4A RELATED DB: PDB REMARK 900 RELATED ID: 5N6N RELATED DB: PDB REMARK 900 RELATED ID: 5NIS RELATED DB: PDB DBREF 5JTA A 1 751 UNP P32356 TREA_YEAST 1 751 SEQRES 1 A 751 MET SER GLN VAL ASN THR SER GLN GLY PRO VAL ALA GLN SEQRES 2 A 751 GLY ARG GLN ARG ARG LEU SER SER LEU SER GLU PHE ASN SEQRES 3 A 751 ASP PRO PHE SER ASN ALA GLU VAL TYR TYR GLY PRO PRO SEQRES 4 A 751 THR ASP PRO ARG LYS GLN LYS GLN ALA LYS PRO ALA LYS SEQRES 5 A 751 ILE ASN ARG THR ARG THR MET SER VAL PHE ASP ASN VAL SEQRES 6 A 751 SER PRO PHE LYS LYS THR GLY PHE GLY LYS LEU GLN GLN SEQRES 7 A 751 THR ARG ARG GLY SER GLU ASP ASP THR TYR SER SER SER SEQRES 8 A 751 GLN GLY ASN ARG ARG PHE PHE ILE GLU ASP VAL ASP LYS SEQRES 9 A 751 THR LEU ASN GLU LEU LEU ALA ALA GLU ASP THR ASP LYS SEQRES 10 A 751 ASN TYR GLN ILE THR ILE GLU ASP THR GLY PRO LYS VAL SEQRES 11 A 751 LEU LYS VAL GLY THR ALA ASN SER TYR GLY TYR LYS HIS SEQRES 12 A 751 ILE ASN ILE ARG GLY THR TYR MET LEU SER ASN LEU LEU SEQRES 13 A 751 GLN GLU LEU THR ILE ALA LYS SER PHE GLY ARG HIS GLN SEQRES 14 A 751 ILE PHE LEU ASP GLU ALA ARG ILE ASN GLU ASN PRO VAL SEQRES 15 A 751 ASN ARG LEU SER ARG LEU ILE ASN THR GLN PHE TRP ASN SEQRES 16 A 751 SER LEU THR ARG ARG VAL ASP LEU ASN ASN VAL GLY GLU SEQRES 17 A 751 ILE ALA LYS ASP THR LYS ILE ASP THR PRO GLY ALA LYS SEQRES 18 A 751 ASN PRO ARG ILE TYR VAL PRO TYR ASP CYS PRO GLU GLN SEQRES 19 A 751 TYR GLU PHE TYR VAL GLN ALA SER GLN MET HIS PRO SER SEQRES 20 A 751 LEU LYS LEU GLU VAL GLU TYR LEU PRO LYS LYS ILE THR SEQRES 21 A 751 ALA GLU TYR VAL LYS SER VAL ASN ASP THR PRO GLY LEU SEQRES 22 A 751 LEU ALA LEU ALA MET GLU GLU HIS PHE ASN PRO SER THR SEQRES 23 A 751 GLY GLU LYS THR LEU ILE GLY TYR PRO TYR ALA VAL PRO SEQRES 24 A 751 GLY GLY ARG PHE ASN GLU LEU TYR GLY TRP ASP SER TYR SEQRES 25 A 751 MET MET ALA LEU GLY LEU LEU GLU ALA ASN LYS THR ASP SEQRES 26 A 751 VAL ALA ARG GLY MET VAL GLU HIS PHE ILE PHE GLU ILE SEQRES 27 A 751 ASN HIS TYR GLY LYS ILE LEU ASN ALA ASN ARG SER TYR SEQRES 28 A 751 TYR LEU CYS ARG SER GLN PRO PRO PHE LEU THR GLU MET SEQRES 29 A 751 ALA LEU VAL VAL PHE LYS LYS LEU GLY GLY ARG SER ASN SEQRES 30 A 751 PRO ASP ALA VAL ASP LEU LEU LYS ARG ALA PHE GLN ALA SEQRES 31 A 751 SER ILE LYS GLU TYR LYS THR VAL TRP THR ALA SER PRO SEQRES 32 A 751 ARG LEU ASP PRO GLU THR GLY LEU SER ARG TYR HIS PRO SEQRES 33 A 751 ASN GLY LEU GLY ILE PRO PRO GLU THR GLU SER ASP HIS SEQRES 34 A 751 PHE ASP THR VAL LEU LEU PRO TYR ALA SER LYS HIS GLY SEQRES 35 A 751 VAL THR LEU ASP GLU PHE LYS GLN LEU TYR ASN ASP GLY SEQRES 36 A 751 LYS ILE LYS GLU PRO LYS LEU ASP GLU PHE PHE LEU HIS SEQRES 37 A 751 ASP ARG GLY VAL ARG GLU SER GLY HIS ASP THR THR TYR SEQRES 38 A 751 ARG PHE GLU GLY VAL CYS ALA TYR LEU ALA THR ILE ASP SEQRES 39 A 751 LEU ASN SER LEU LEU TYR LYS TYR GLU ILE ASP ILE ALA SEQRES 40 A 751 ASP PHE ILE LYS GLU PHE CYS ASP ASP LYS TYR GLU ASP SEQRES 41 A 751 PRO LEU ASP HIS SER ILE THR THR SER ALA MET TRP LYS SEQRES 42 A 751 GLU MET ALA LYS ILE ARG GLN GLU LYS ILE THR LYS TYR SEQRES 43 A 751 MET TRP ASP ASP GLU SER GLY PHE PHE PHE ASP TYR ASN SEQRES 44 A 751 THR LYS ILE LYS HIS ARG THR SER TYR GLU SER ALA THR SEQRES 45 A 751 THR PHE TRP ALA LEU TRP ALA GLY LEU ALA THR LYS GLU SEQRES 46 A 751 GLN ALA GLN LYS MET VAL GLU LYS ALA LEU PRO LYS LEU SEQRES 47 A 751 GLU MET LEU GLY GLY LEU ALA ALA CYS THR GLU ARG SER SEQRES 48 A 751 ARG GLY PRO ILE SER ILE SER ARG PRO ILE ARG GLN TRP SEQRES 49 A 751 ASP TYR PRO PHE GLY TRP ALA PRO HIS GLN ILE LEU ALA SEQRES 50 A 751 TRP GLU GLY LEU ARG SER TYR GLY TYR LEU THR VAL THR SEQRES 51 A 751 ASN ARG LEU ALA TYR ARG TRP LEU PHE MET MET THR LYS SEQRES 52 A 751 ALA PHE VAL ASP TYR ASN GLY ILE VAL VAL GLU LYS TYR SEQRES 53 A 751 ASP VAL THR ARG GLY THR ASP PRO HIS ARG VAL GLU ALA SEQRES 54 A 751 GLU TYR GLY ASN GLN GLY ALA ASP PHE LYS GLY ALA ALA SEQRES 55 A 751 THR GLU GLY PHE GLY TRP VAL ASN ALA SER TYR ILE LEU SEQRES 56 A 751 GLY LEU LYS TYR MET ASN SER HIS ALA ARG ARG ALA LEU SEQRES 57 A 751 GLY ALA CYS ILE PRO PRO ILE SER PHE PHE SER SER LEU SEQRES 58 A 751 ARG PRO GLN GLU ARG ASN LEU TYR GLY LEU FORMUL 2 HOH *21(H2 O) HELIX 1 AA1 ASN A 180 THR A 191 1 12 HELIX 2 AA2 THR A 191 LEU A 197 1 7 HELIX 3 AA3 ASN A 205 LYS A 211 1 7 HELIX 4 AA4 THR A 217 LYS A 221 5 5 HELIX 5 AA5 CYS A 231 HIS A 245 1 15 HELIX 6 AA6 PRO A 246 LYS A 249 5 4 HELIX 7 AA7 THR A 260 VAL A 267 1 8 HELIX 8 AA8 TRP A 309 ALA A 321 1 13 HELIX 9 AA9 LYS A 323 GLY A 342 1 20 HELIX 10 AB1 ARG A 349 LEU A 353 5 5 HELIX 11 AB2 PHE A 360 GLY A 373 1 14 HELIX 12 AB3 GLY A 374 SER A 376 5 3 HELIX 13 AB4 ASN A 377 VAL A 398 1 22 HELIX 14 AB5 PHE A 430 HIS A 441 1 12 HELIX 15 AB6 THR A 444 ASP A 454 1 11 HELIX 16 AB7 GLU A 459 GLY A 476 1 18 HELIX 17 AB8 VAL A 486 ALA A 488 5 3 HELIX 18 AB9 THR A 492 CYS A 514 1 23 HELIX 19 AC1 THR A 528 TRP A 548 1 21 HELIX 20 AC2 SER A 570 THR A 573 5 4 HELIX 21 AC3 PHE A 574 GLY A 580 1 7 HELIX 22 AC4 THR A 583 ALA A 594 1 12 HELIX 23 AC5 ALA A 594 LEU A 598 1 5 HELIX 24 AC6 THR A 608 GLY A 613 1 6 HELIX 25 AC7 TRP A 630 TYR A 644 1 15 HELIX 26 AC8 TYR A 646 TYR A 668 1 23 HELIX 27 AC9 PHE A 706 TYR A 719 1 14 HELIX 28 AD1 ASN A 721 ALA A 730 1 10 HELIX 29 AD2 PRO A 733 SER A 740 1 8 HELIX 30 AD3 ARG A 742 ASN A 747 1 6 HELIX 31 AD4 LEU A 748 GLY A 750 5 3 SHEET 1 AA1 2 THR A 198 ARG A 199 0 SHEET 2 AA1 2 TYR A 296 ALA A 297 -1 O TYR A 296 N ARG A 199 SHEET 1 AA2 3 GLU A 251 TYR A 254 0 SHEET 2 AA2 3 ARG A 224 VAL A 227 1 N ILE A 225 O GLU A 251 SHEET 3 AA2 3 LEU A 273 LEU A 274 1 O LEU A 273 N ARG A 224 SHEET 1 AA3 2 MET A 278 PHE A 282 0 SHEET 2 AA3 2 LYS A 289 GLY A 293 -1 O ILE A 292 N GLU A 279 SHEET 1 AA4 3 LEU A 490 ALA A 491 0 SHEET 2 AA4 3 TYR A 558 ASN A 559 -1 O TYR A 558 N ALA A 491 SHEET 3 AA4 3 HIS A 564 ARG A 565 -1 O HIS A 564 N ASN A 559 SHEET 1 AA5 2 TYR A 518 GLU A 519 0 SHEET 2 AA5 2 ILE A 526 THR A 527 -1 O THR A 527 N TYR A 518 SHEET 1 AA6 2 GLU A 599 MET A 600 0 SHEET 2 AA6 2 GLY A 603 LEU A 604 -1 O GLY A 603 N MET A 600 SHEET 1 AA7 2 PHE A 628 GLY A 629 0 SHEET 2 AA7 2 TYR A 676 ASP A 677 -1 O TYR A 676 N GLY A 629 CISPEP 1 ASP A 478 THR A 479 0 6.62 CISPEP 2 TYR A 626 PRO A 627 0 -2.13 CRYST1 186.700 186.700 119.870 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005356 0.003092 0.000000 0.00000 SCALE2 0.000000 0.006185 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008342 0.00000