data_5JU9 # _entry.id 5JU9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5JU9 WWPDB D_1000221240 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5JU9 _pdbx_database_status.recvd_initial_deposition_date 2016-05-10 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jin, Y.' 1 'Petricevic, M.' 2 'Goddard-Borger, E.D.' 3 'Williams, S.J.' 4 'Davies, G.J.' 5 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'ACS Cent Sci' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2374-7943 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 2 _citation.language ? _citation.page_first 896 _citation.page_last 903 _citation.title 'A beta-Mannanase with a Lysozyme-like Fold and a Novel Molecular Catalytic Mechanism.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acscentsci.6b00232 _citation.pdbx_database_id_PubMed 28058278 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jin, Y.' 1 ? primary 'Petricevic, M.' 2 ? primary 'John, A.' 3 ? primary 'Raich, L.' 4 ? primary 'Jenkins, H.' 5 ? primary 'Portela De Souza, L.' 6 ? primary 'Cuskin, F.' 7 ? primary 'Gilbert, H.J.' 8 ? primary 'Rovira, C.' 9 ? primary 'Goddard-Borger, E.D.' 10 ? primary 'Williams, S.J.' 11 ? primary 'Davies, G.J.' 12 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5JU9 _cell.details ? _cell.formula_units_Z ? _cell.length_a 36.680 _cell.length_a_esd ? _cell.length_b 53.630 _cell.length_b_esd ? _cell.length_c 82.140 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JU9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man beta-1,4-mannanase 17593.283 1 3.2.1.78 ? ? ? 2 branched man 'beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-alpha-D-mannopyranose' 504.438 1 ? ? ? ? 3 non-polymer man 'CHLORIDE ION' 35.453 2 ? ? ? ? 4 water nat water 18.015 162 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SACPSGATCGSYTVGGLGSRKQQVRNAGGSSLDLAVAMLETERMDTAYPYGDNKSGDAANFGIFKQNWLMLRSACAQFGG QGAGQYDNGAALNSSLGQDVSCLHQSQSHYGLDAWFAGHRNGASGLSSPNTADIAAYKAAVYWIKAQLDADSANLGNDTR FWVQVPAI ; _entity_poly.pdbx_seq_one_letter_code_can ;SACPSGATCGSYTVGGLGSRKQQVRNAGGSSLDLAVAMLETERMDTAYPYGDNKSGDAANFGIFKQNWLMLRSACAQFGG QGAGQYDNGAALNSSLGQDVSCLHQSQSHYGLDAWFAGHRNGASGLSSPNTADIAAYKAAVYWIKAQLDADSANLGNDTR FWVQVPAI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ALA n 1 3 CYS n 1 4 PRO n 1 5 SER n 1 6 GLY n 1 7 ALA n 1 8 THR n 1 9 CYS n 1 10 GLY n 1 11 SER n 1 12 TYR n 1 13 THR n 1 14 VAL n 1 15 GLY n 1 16 GLY n 1 17 LEU n 1 18 GLY n 1 19 SER n 1 20 ARG n 1 21 LYS n 1 22 GLN n 1 23 GLN n 1 24 VAL n 1 25 ARG n 1 26 ASN n 1 27 ALA n 1 28 GLY n 1 29 GLY n 1 30 SER n 1 31 SER n 1 32 LEU n 1 33 ASP n 1 34 LEU n 1 35 ALA n 1 36 VAL n 1 37 ALA n 1 38 MET n 1 39 LEU n 1 40 GLU n 1 41 THR n 1 42 GLU n 1 43 ARG n 1 44 MET n 1 45 ASP n 1 46 THR n 1 47 ALA n 1 48 TYR n 1 49 PRO n 1 50 TYR n 1 51 GLY n 1 52 ASP n 1 53 ASN n 1 54 LYS n 1 55 SER n 1 56 GLY n 1 57 ASP n 1 58 ALA n 1 59 ALA n 1 60 ASN n 1 61 PHE n 1 62 GLY n 1 63 ILE n 1 64 PHE n 1 65 LYS n 1 66 GLN n 1 67 ASN n 1 68 TRP n 1 69 LEU n 1 70 MET n 1 71 LEU n 1 72 ARG n 1 73 SER n 1 74 ALA n 1 75 CYS n 1 76 ALA n 1 77 GLN n 1 78 PHE n 1 79 GLY n 1 80 GLY n 1 81 GLN n 1 82 GLY n 1 83 ALA n 1 84 GLY n 1 85 GLN n 1 86 TYR n 1 87 ASP n 1 88 ASN n 1 89 GLY n 1 90 ALA n 1 91 ALA n 1 92 LEU n 1 93 ASN n 1 94 SER n 1 95 SER n 1 96 LEU n 1 97 GLY n 1 98 GLN n 1 99 ASP n 1 100 VAL n 1 101 SER n 1 102 CYS n 1 103 LEU n 1 104 HIS n 1 105 GLN n 1 106 SER n 1 107 GLN n 1 108 SER n 1 109 HIS n 1 110 TYR n 1 111 GLY n 1 112 LEU n 1 113 ASP n 1 114 ALA n 1 115 TRP n 1 116 PHE n 1 117 ALA n 1 118 GLY n 1 119 HIS n 1 120 ARG n 1 121 ASN n 1 122 GLY n 1 123 ALA n 1 124 SER n 1 125 GLY n 1 126 LEU n 1 127 SER n 1 128 SER n 1 129 PRO n 1 130 ASN n 1 131 THR n 1 132 ALA n 1 133 ASP n 1 134 ILE n 1 135 ALA n 1 136 ALA n 1 137 TYR n 1 138 LYS n 1 139 ALA n 1 140 ALA n 1 141 VAL n 1 142 TYR n 1 143 TRP n 1 144 ILE n 1 145 LYS n 1 146 ALA n 1 147 GLN n 1 148 LEU n 1 149 ASP n 1 150 ALA n 1 151 ASP n 1 152 SER n 1 153 ALA n 1 154 ASN n 1 155 LEU n 1 156 GLY n 1 157 ASN n 1 158 ASP n 1 159 THR n 1 160 ARG n 1 161 PHE n 1 162 TRP n 1 163 VAL n 1 164 GLN n 1 165 VAL n 1 166 PRO n 1 167 ALA n 1 168 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 168 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'NRRL B-24484' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details 'Streptomyces sp. NRRL B-24484, Taxonomy ID: 1463833' _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptomyces sp. NRRL B-24361' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 354193 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Codon plus' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pHisMALP _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5JU9 _struct_ref.pdbx_db_accession 5JU9 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5JU9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 168 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5JU9 _struct_ref_seq.db_align_beg 6 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 173 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 6 _struct_ref_seq.pdbx_auth_seq_align_end 173 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose ? 'C6 H12 O6' 180.156 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose ? 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5JU9 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.43 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;The protein stock in the buffer of 20 mM sodium phosphate, pH7.2, and 200 mM NaCl is mixed 1:1 with the precipitant consist of 20% PEG6000, 0.15-0.2 M CaCl2, and 0.1 M Na HEPES, pH 7.0 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-02-01 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97949 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I02' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97949 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I02 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5JU9 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.18 _reflns.d_resolution_low 44.91 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 52763 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.18 _reflns_shell.d_res_low 1.21 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 80.2 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.558 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 0.09 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] 0.11 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] -0.20 _refine.B_iso_max ? _refine.B_iso_mean 13.909 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.979 _refine.correlation_coeff_Fo_to_Fc_free 0.971 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5JU9 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.18 _refine.ls_d_res_low 44.91 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 50049 _refine.ls_number_reflns_R_free 2647 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.39 _refine.ls_percent_reflns_R_free 5.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.13250 _refine.ls_R_factor_R_free 0.15313 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.13143 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'alpha-helical fragment' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.032 _refine.pdbx_overall_ESU_R_Free 0.032 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 0.881 _refine.overall_SU_ML 0.018 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1230 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 162 _refine_hist.number_atoms_total 1428 _refine_hist.d_res_high 1.18 _refine_hist.d_res_low 44.91 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 0.019 1340 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 1184 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.574 1.952 1836 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.062 3.000 2737 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.096 5.000 184 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 36.944 25.000 62 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 11.877 15.000 193 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 23.610 15.000 6 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.107 0.200 201 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 0.020 1606 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 330 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 1.247 1.229 685 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.247 1.228 684 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.604 1.852 859 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 1.603 1.853 860 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 1.702 1.357 655 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 1.701 1.357 655 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 2.158 1.997 969 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 2.689 11.130 1732 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 2.688 11.132 1733 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? 1.492 3.000 2524 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? 28.502 5.000 54 ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? 7.764 5.000 2595 ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.180 _refine_ls_shell.d_res_low 1.211 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 152 _refine_ls_shell.number_reflns_R_work 2968 _refine_ls_shell.percent_reflns_obs 79.35 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.252 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.260 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5JU9 _struct.title 'Structure of a beta-1,4-mannanase, SsGH134, in complex with Man3.' _struct.pdbx_descriptor 'beta-1,4-mannanase (E.C.3.2.1.78)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5JU9 _struct_keywords.text 'beta-1, 4-mannanase, carbohydrate degrading, glycosyl hydrolase, hydrolase' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 16 ? ALA A 27 ? GLY A 21 ALA A 32 1 ? 12 HELX_P HELX_P2 AA2 SER A 30 ? THR A 41 ? SER A 35 THR A 46 1 ? 12 HELX_P HELX_P3 AA3 PRO A 49 ? LYS A 54 ? PRO A 54 LYS A 59 5 ? 6 HELX_P HELX_P4 AA4 SER A 55 ? ALA A 58 ? SER A 60 ALA A 63 5 ? 4 HELX_P HELX_P5 AA5 TRP A 68 ? CYS A 75 ? TRP A 73 CYS A 80 1 ? 8 HELX_P HELX_P6 AA6 ALA A 76 ? GLY A 79 ? ALA A 81 GLY A 84 5 ? 4 HELX_P HELX_P7 AA7 GLY A 82 ? SER A 94 ? GLY A 87 SER A 99 5 ? 13 HELX_P HELX_P8 AA8 SER A 95 ? GLY A 111 ? SER A 100 GLY A 116 1 ? 17 HELX_P HELX_P9 AA9 GLY A 111 ? SER A 128 ? GLY A 116 SER A 133 1 ? 18 HELX_P HELX_P10 AB1 THR A 131 ? ASP A 151 ? THR A 136 ASP A 156 1 ? 21 HELX_P HELX_P11 AB2 SER A 152 ? GLY A 156 ? SER A 157 GLY A 161 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 9 SG ? ? A CYS 8 A CYS 14 1_555 ? ? ? ? ? ? ? 2.048 ? ? disulf2 disulf ? ? A CYS 75 SG B ? ? 1_555 A CYS 102 SG ? ? A CYS 80 A CYS 107 1_555 ? ? ? ? ? ? ? 2.061 ? ? covale1 covale one ? B MAN . O4 ? ? ? 1_555 B BMA . C1 ? ? B MAN 1 B BMA 2 1_555 ? ? ? ? ? ? ? 1.408 ? ? covale2 covale one ? B BMA . O4 ? ? ? 1_555 B BMA . C1 ? ? B BMA 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.417 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 CYS A 9 ? THR A 13 ? CYS A 14 THR A 18 AA1 2 THR A 159 ? VAL A 163 ? THR A 164 VAL A 168 AA2 1 ASN A 60 ? PHE A 61 ? ASN A 65 PHE A 66 AA2 2 GLN A 66 ? ASN A 67 ? GLN A 71 ASN A 72 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TYR A 12 ? N TYR A 17 O ARG A 160 ? O ARG A 165 AA2 1 2 N PHE A 61 ? N PHE A 66 O GLN A 66 ? O GLN A 71 # _atom_sites.entry_id 5JU9 _atom_sites.fract_transf_matrix[1][1] 0.027263 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018646 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012174 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 6 ? ? ? A . n A 1 2 ALA 2 7 7 ALA ALA A . n A 1 3 CYS 3 8 8 CYS CYS A . n A 1 4 PRO 4 9 9 PRO PRO A . n A 1 5 SER 5 10 10 SER SER A . n A 1 6 GLY 6 11 11 GLY GLY A . n A 1 7 ALA 7 12 12 ALA ALA A . n A 1 8 THR 8 13 13 THR THR A . n A 1 9 CYS 9 14 14 CYS CYS A . n A 1 10 GLY 10 15 15 GLY GLY A . n A 1 11 SER 11 16 16 SER SER A . n A 1 12 TYR 12 17 17 TYR TYR A . n A 1 13 THR 13 18 18 THR THR A . n A 1 14 VAL 14 19 19 VAL VAL A . n A 1 15 GLY 15 20 20 GLY GLY A . n A 1 16 GLY 16 21 21 GLY GLY A . n A 1 17 LEU 17 22 22 LEU LEU A . n A 1 18 GLY 18 23 23 GLY GLY A . n A 1 19 SER 19 24 24 SER SER A . n A 1 20 ARG 20 25 25 ARG ARG A . n A 1 21 LYS 21 26 26 LYS LYS A . n A 1 22 GLN 22 27 27 GLN GLN A . n A 1 23 GLN 23 28 28 GLN GLN A . n A 1 24 VAL 24 29 29 VAL VAL A . n A 1 25 ARG 25 30 30 ARG ARG A . n A 1 26 ASN 26 31 31 ASN ASN A . n A 1 27 ALA 27 32 32 ALA ALA A . n A 1 28 GLY 28 33 33 GLY GLY A . n A 1 29 GLY 29 34 34 GLY GLY A . n A 1 30 SER 30 35 35 SER SER A . n A 1 31 SER 31 36 36 SER SER A . n A 1 32 LEU 32 37 37 LEU LEU A . n A 1 33 ASP 33 38 38 ASP ASP A . n A 1 34 LEU 34 39 39 LEU LEU A . n A 1 35 ALA 35 40 40 ALA ALA A . n A 1 36 VAL 36 41 41 VAL VAL A . n A 1 37 ALA 37 42 42 ALA ALA A . n A 1 38 MET 38 43 43 MET MET A . n A 1 39 LEU 39 44 44 LEU LEU A . n A 1 40 GLU 40 45 45 GLU GLU A . n A 1 41 THR 41 46 46 THR THR A . n A 1 42 GLU 42 47 47 GLU GLU A . n A 1 43 ARG 43 48 48 ARG ARG A . n A 1 44 MET 44 49 49 MET MET A . n A 1 45 ASP 45 50 50 ASP ASP A . n A 1 46 THR 46 51 51 THR THR A . n A 1 47 ALA 47 52 52 ALA ALA A . n A 1 48 TYR 48 53 53 TYR TYR A . n A 1 49 PRO 49 54 54 PRO PRO A . n A 1 50 TYR 50 55 55 TYR TYR A . n A 1 51 GLY 51 56 56 GLY GLY A . n A 1 52 ASP 52 57 57 ASP ASP A . n A 1 53 ASN 53 58 58 ASN ASN A . n A 1 54 LYS 54 59 59 LYS LYS A . n A 1 55 SER 55 60 60 SER SER A . n A 1 56 GLY 56 61 61 GLY GLY A . n A 1 57 ASP 57 62 62 ASP ASP A . n A 1 58 ALA 58 63 63 ALA ALA A . n A 1 59 ALA 59 64 64 ALA ALA A . n A 1 60 ASN 60 65 65 ASN ASN A . n A 1 61 PHE 61 66 66 PHE PHE A . n A 1 62 GLY 62 67 67 GLY GLY A . n A 1 63 ILE 63 68 68 ILE ILE A . n A 1 64 PHE 64 69 69 PHE PHE A . n A 1 65 LYS 65 70 70 LYS LYS A . n A 1 66 GLN 66 71 71 GLN GLN A . n A 1 67 ASN 67 72 72 ASN ASN A . n A 1 68 TRP 68 73 73 TRP TRP A . n A 1 69 LEU 69 74 74 LEU LEU A . n A 1 70 MET 70 75 75 MET MET A . n A 1 71 LEU 71 76 76 LEU LEU A . n A 1 72 ARG 72 77 77 ARG ARG A . n A 1 73 SER 73 78 78 SER SER A . n A 1 74 ALA 74 79 79 ALA ALA A . n A 1 75 CYS 75 80 80 CYS CYS A . n A 1 76 ALA 76 81 81 ALA ALA A . n A 1 77 GLN 77 82 82 GLN GLN A . n A 1 78 PHE 78 83 83 PHE PHE A . n A 1 79 GLY 79 84 84 GLY GLY A . n A 1 80 GLY 80 85 85 GLY GLY A . n A 1 81 GLN 81 86 86 GLN GLN A . n A 1 82 GLY 82 87 87 GLY GLY A . n A 1 83 ALA 83 88 88 ALA ALA A . n A 1 84 GLY 84 89 89 GLY GLY A . n A 1 85 GLN 85 90 90 GLN GLN A . n A 1 86 TYR 86 91 91 TYR TYR A . n A 1 87 ASP 87 92 92 ASP ASP A . n A 1 88 ASN 88 93 93 ASN ASN A . n A 1 89 GLY 89 94 94 GLY GLY A . n A 1 90 ALA 90 95 95 ALA ALA A . n A 1 91 ALA 91 96 96 ALA ALA A . n A 1 92 LEU 92 97 97 LEU LEU A . n A 1 93 ASN 93 98 98 ASN ASN A . n A 1 94 SER 94 99 99 SER SER A . n A 1 95 SER 95 100 100 SER SER A . n A 1 96 LEU 96 101 101 LEU LEU A . n A 1 97 GLY 97 102 102 GLY GLY A . n A 1 98 GLN 98 103 103 GLN GLN A . n A 1 99 ASP 99 104 104 ASP ASP A . n A 1 100 VAL 100 105 105 VAL VAL A . n A 1 101 SER 101 106 106 SER SER A . n A 1 102 CYS 102 107 107 CYS CYS A . n A 1 103 LEU 103 108 108 LEU LEU A . n A 1 104 HIS 104 109 109 HIS HIS A . n A 1 105 GLN 105 110 110 GLN GLN A . n A 1 106 SER 106 111 111 SER SER A . n A 1 107 GLN 107 112 112 GLN GLN A . n A 1 108 SER 108 113 113 SER SER A . n A 1 109 HIS 109 114 114 HIS HIS A . n A 1 110 TYR 110 115 115 TYR TYR A . n A 1 111 GLY 111 116 116 GLY GLY A . n A 1 112 LEU 112 117 117 LEU LEU A . n A 1 113 ASP 113 118 118 ASP ASP A . n A 1 114 ALA 114 119 119 ALA ALA A . n A 1 115 TRP 115 120 120 TRP TRP A . n A 1 116 PHE 116 121 121 PHE PHE A . n A 1 117 ALA 117 122 122 ALA ALA A . n A 1 118 GLY 118 123 123 GLY GLY A . n A 1 119 HIS 119 124 124 HIS HIS A . n A 1 120 ARG 120 125 125 ARG ARG A . n A 1 121 ASN 121 126 126 ASN ASN A . n A 1 122 GLY 122 127 127 GLY GLY A . n A 1 123 ALA 123 128 128 ALA ALA A . n A 1 124 SER 124 129 129 SER SER A . n A 1 125 GLY 125 130 130 GLY GLY A . n A 1 126 LEU 126 131 131 LEU LEU A . n A 1 127 SER 127 132 132 SER SER A . n A 1 128 SER 128 133 133 SER SER A . n A 1 129 PRO 129 134 134 PRO PRO A . n A 1 130 ASN 130 135 135 ASN ASN A . n A 1 131 THR 131 136 136 THR THR A . n A 1 132 ALA 132 137 137 ALA ALA A . n A 1 133 ASP 133 138 138 ASP ASP A . n A 1 134 ILE 134 139 139 ILE ILE A . n A 1 135 ALA 135 140 140 ALA ALA A . n A 1 136 ALA 136 141 141 ALA ALA A . n A 1 137 TYR 137 142 142 TYR TYR A . n A 1 138 LYS 138 143 143 LYS LYS A . n A 1 139 ALA 139 144 144 ALA ALA A . n A 1 140 ALA 140 145 145 ALA ALA A . n A 1 141 VAL 141 146 146 VAL VAL A . n A 1 142 TYR 142 147 147 TYR TYR A . n A 1 143 TRP 143 148 148 TRP TRP A . n A 1 144 ILE 144 149 149 ILE ILE A . n A 1 145 LYS 145 150 150 LYS LYS A . n A 1 146 ALA 146 151 151 ALA ALA A . n A 1 147 GLN 147 152 152 GLN GLN A . n A 1 148 LEU 148 153 153 LEU LEU A . n A 1 149 ASP 149 154 154 ASP ASP A . n A 1 150 ALA 150 155 155 ALA ALA A . n A 1 151 ASP 151 156 156 ASP ASP A . n A 1 152 SER 152 157 157 SER SER A . n A 1 153 ALA 153 158 158 ALA ALA A . n A 1 154 ASN 154 159 159 ASN ASN A . n A 1 155 LEU 155 160 160 LEU LEU A . n A 1 156 GLY 156 161 161 GLY GLY A . n A 1 157 ASN 157 162 162 ASN ASN A . n A 1 158 ASP 158 163 163 ASP ASP A . n A 1 159 THR 159 164 164 THR THR A . n A 1 160 ARG 160 165 165 ARG ARG A . n A 1 161 PHE 161 166 166 PHE PHE A . n A 1 162 TRP 162 167 167 TRP TRP A . n A 1 163 VAL 163 168 168 VAL VAL A . n A 1 164 GLN 164 169 169 GLN GLN A . n A 1 165 VAL 165 170 170 VAL VAL A . n A 1 166 PRO 166 171 171 PRO PRO A . n A 1 167 ALA 167 172 172 ALA ALA A . n A 1 168 ILE 168 173 173 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CL 1 204 1 CL CL A . D 3 CL 1 205 3 CL CL A . E 4 HOH 1 301 110 HOH HOH A . E 4 HOH 2 302 128 HOH HOH A . E 4 HOH 3 303 118 HOH HOH A . E 4 HOH 4 304 186 HOH HOH A . E 4 HOH 5 305 119 HOH HOH A . E 4 HOH 6 306 58 HOH HOH A . E 4 HOH 7 307 130 HOH HOH A . E 4 HOH 8 308 93 HOH HOH A . E 4 HOH 9 309 165 HOH HOH A . E 4 HOH 10 310 2 HOH HOH A . E 4 HOH 11 311 191 HOH HOH A . E 4 HOH 12 312 52 HOH HOH A . E 4 HOH 13 313 180 HOH HOH A . E 4 HOH 14 314 46 HOH HOH A . E 4 HOH 15 315 151 HOH HOH A . E 4 HOH 16 316 10 HOH HOH A . E 4 HOH 17 317 59 HOH HOH A . E 4 HOH 18 318 66 HOH HOH A . E 4 HOH 19 319 135 HOH HOH A . E 4 HOH 20 320 3 HOH HOH A . E 4 HOH 21 321 7 HOH HOH A . E 4 HOH 22 322 62 HOH HOH A . E 4 HOH 23 323 159 HOH HOH A . E 4 HOH 24 324 26 HOH HOH A . E 4 HOH 25 325 25 HOH HOH A . E 4 HOH 26 326 170 HOH HOH A . E 4 HOH 27 327 48 HOH HOH A . E 4 HOH 28 328 85 HOH HOH A . E 4 HOH 29 329 142 HOH HOH A . E 4 HOH 30 330 100 HOH HOH A . E 4 HOH 31 331 13 HOH HOH A . E 4 HOH 32 332 31 HOH HOH A . E 4 HOH 33 333 5 HOH HOH A . E 4 HOH 34 334 47 HOH HOH A . E 4 HOH 35 335 57 HOH HOH A . E 4 HOH 36 336 152 HOH HOH A . E 4 HOH 37 337 18 HOH HOH A . E 4 HOH 38 338 94 HOH HOH A . E 4 HOH 39 339 4 HOH HOH A . E 4 HOH 40 340 23 HOH HOH A . E 4 HOH 41 341 169 HOH HOH A . E 4 HOH 42 342 69 HOH HOH A . E 4 HOH 43 343 80 HOH HOH A . E 4 HOH 44 344 56 HOH HOH A . E 4 HOH 45 345 104 HOH HOH A . E 4 HOH 46 346 124 HOH HOH A . E 4 HOH 47 347 120 HOH HOH A . E 4 HOH 48 348 65 HOH HOH A . E 4 HOH 49 349 42 HOH HOH A . E 4 HOH 50 350 39 HOH HOH A . E 4 HOH 51 351 74 HOH HOH A . E 4 HOH 52 352 36 HOH HOH A . E 4 HOH 53 353 44 HOH HOH A . E 4 HOH 54 354 139 HOH HOH A . E 4 HOH 55 355 73 HOH HOH A . E 4 HOH 56 356 68 HOH HOH A . E 4 HOH 57 357 160 HOH HOH A . E 4 HOH 58 358 175 HOH HOH A . E 4 HOH 59 359 84 HOH HOH A . E 4 HOH 60 360 61 HOH HOH A . E 4 HOH 61 361 38 HOH HOH A . E 4 HOH 62 362 32 HOH HOH A . E 4 HOH 63 363 43 HOH HOH A . E 4 HOH 64 364 79 HOH HOH A . E 4 HOH 65 365 105 HOH HOH A . E 4 HOH 66 366 149 HOH HOH A . E 4 HOH 67 367 54 HOH HOH A . E 4 HOH 68 368 64 HOH HOH A . E 4 HOH 69 369 167 HOH HOH A . E 4 HOH 70 370 49 HOH HOH A . E 4 HOH 71 371 99 HOH HOH A . E 4 HOH 72 372 8 HOH HOH A . E 4 HOH 73 373 91 HOH HOH A . E 4 HOH 74 374 173 HOH HOH A . E 4 HOH 75 375 71 HOH HOH A . E 4 HOH 76 376 185 HOH HOH A . E 4 HOH 77 377 45 HOH HOH A . E 4 HOH 78 378 162 HOH HOH A . E 4 HOH 79 379 121 HOH HOH A . E 4 HOH 80 380 86 HOH HOH A . E 4 HOH 81 381 6 HOH HOH A . E 4 HOH 82 382 19 HOH HOH A . E 4 HOH 83 383 177 HOH HOH A . E 4 HOH 84 384 163 HOH HOH A . E 4 HOH 85 385 27 HOH HOH A . E 4 HOH 86 386 98 HOH HOH A . E 4 HOH 87 387 17 HOH HOH A . E 4 HOH 88 388 14 HOH HOH A . E 4 HOH 89 389 97 HOH HOH A . E 4 HOH 90 390 20 HOH HOH A . E 4 HOH 91 391 15 HOH HOH A . E 4 HOH 92 392 75 HOH HOH A . E 4 HOH 93 393 137 HOH HOH A . E 4 HOH 94 394 132 HOH HOH A . E 4 HOH 95 395 102 HOH HOH A . E 4 HOH 96 396 157 HOH HOH A . E 4 HOH 97 397 77 HOH HOH A . E 4 HOH 98 398 174 HOH HOH A . E 4 HOH 99 399 89 HOH HOH A . E 4 HOH 100 400 145 HOH HOH A . E 4 HOH 101 401 83 HOH HOH A . E 4 HOH 102 402 188 HOH HOH A . E 4 HOH 103 403 155 HOH HOH A . E 4 HOH 104 404 183 HOH HOH A . E 4 HOH 105 405 70 HOH HOH A . E 4 HOH 106 406 184 HOH HOH A . E 4 HOH 107 407 126 HOH HOH A . E 4 HOH 108 408 12 HOH HOH A . E 4 HOH 109 409 34 HOH HOH A . E 4 HOH 110 410 63 HOH HOH A . E 4 HOH 111 411 95 HOH HOH A . E 4 HOH 112 412 35 HOH HOH A . E 4 HOH 113 413 33 HOH HOH A . E 4 HOH 114 414 138 HOH HOH A . E 4 HOH 115 415 129 HOH HOH A . E 4 HOH 116 416 24 HOH HOH A . E 4 HOH 117 417 134 HOH HOH A . E 4 HOH 118 418 164 HOH HOH A . E 4 HOH 119 419 154 HOH HOH A . E 4 HOH 120 420 22 HOH HOH A . E 4 HOH 121 421 166 HOH HOH A . E 4 HOH 122 422 171 HOH HOH A . E 4 HOH 123 423 168 HOH HOH A . E 4 HOH 124 424 101 HOH HOH A . E 4 HOH 125 425 29 HOH HOH A . E 4 HOH 126 426 60 HOH HOH A . E 4 HOH 127 427 153 HOH HOH A . E 4 HOH 128 428 125 HOH HOH A . E 4 HOH 129 429 30 HOH HOH A . E 4 HOH 130 430 37 HOH HOH A . E 4 HOH 131 431 158 HOH HOH A . E 4 HOH 132 432 9 HOH HOH A . E 4 HOH 133 433 182 HOH HOH A . E 4 HOH 134 434 67 HOH HOH A . E 4 HOH 135 435 41 HOH HOH A . E 4 HOH 136 436 187 HOH HOH A . E 4 HOH 137 437 106 HOH HOH A . E 4 HOH 138 438 117 HOH HOH A . E 4 HOH 139 439 115 HOH HOH A . E 4 HOH 140 440 133 HOH HOH A . E 4 HOH 141 441 144 HOH HOH A . E 4 HOH 142 442 109 HOH HOH A . E 4 HOH 143 443 108 HOH HOH A . E 4 HOH 144 444 181 HOH HOH A . E 4 HOH 145 445 40 HOH HOH A . E 4 HOH 146 446 127 HOH HOH A . E 4 HOH 147 447 178 HOH HOH A . E 4 HOH 148 448 51 HOH HOH A . E 4 HOH 149 449 150 HOH HOH A . E 4 HOH 150 450 90 HOH HOH A . E 4 HOH 151 451 148 HOH HOH A . E 4 HOH 152 452 179 HOH HOH A . E 4 HOH 153 453 122 HOH HOH A . E 4 HOH 154 454 87 HOH HOH A . E 4 HOH 155 455 176 HOH HOH A . E 4 HOH 156 456 189 HOH HOH A . E 4 HOH 157 457 131 HOH HOH A . E 4 HOH 158 458 161 HOH HOH A . E 4 HOH 159 459 55 HOH HOH A . E 4 HOH 160 460 190 HOH HOH A . E 4 HOH 161 461 114 HOH HOH A . E 4 HOH 162 462 116 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1400 ? 1 MORE -9 ? 1 'SSA (A^2)' 7050 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-11-16 2 'Structure model' 1 1 2017-01-18 3 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' atom_site_anisotrop 3 3 'Structure model' chem_comp 4 3 'Structure model' entity 5 3 'Structure model' pdbx_branch_scheme 6 3 'Structure model' pdbx_chem_comp_identifier 7 3 'Structure model' pdbx_entity_branch 8 3 'Structure model' pdbx_entity_branch_descriptor 9 3 'Structure model' pdbx_entity_branch_link 10 3 'Structure model' pdbx_entity_branch_list 11 3 'Structure model' pdbx_entity_nonpoly 12 3 'Structure model' pdbx_nonpoly_scheme 13 3 'Structure model' pdbx_struct_assembly_gen 14 3 'Structure model' struct_asym 15 3 'Structure model' struct_conn 16 3 'Structure model' struct_site 17 3 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.B_iso_or_equiv' 2 3 'Structure model' '_atom_site.Cartn_x' 3 3 'Structure model' '_atom_site.Cartn_y' 4 3 'Structure model' '_atom_site.Cartn_z' 5 3 'Structure model' '_atom_site.auth_asym_id' 6 3 'Structure model' '_atom_site.auth_atom_id' 7 3 'Structure model' '_atom_site.auth_comp_id' 8 3 'Structure model' '_atom_site.auth_seq_id' 9 3 'Structure model' '_atom_site.label_asym_id' 10 3 'Structure model' '_atom_site.label_atom_id' 11 3 'Structure model' '_atom_site.label_comp_id' 12 3 'Structure model' '_atom_site.label_entity_id' 13 3 'Structure model' '_atom_site.type_symbol' 14 3 'Structure model' '_atom_site_anisotrop.U[1][1]' 15 3 'Structure model' '_atom_site_anisotrop.U[1][2]' 16 3 'Structure model' '_atom_site_anisotrop.U[1][3]' 17 3 'Structure model' '_atom_site_anisotrop.U[2][2]' 18 3 'Structure model' '_atom_site_anisotrop.U[2][3]' 19 3 'Structure model' '_atom_site_anisotrop.U[3][3]' 20 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 21 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 22 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 23 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 24 3 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 25 3 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 26 3 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 27 3 'Structure model' '_atom_site_anisotrop.type_symbol' 28 3 'Structure model' '_chem_comp.name' 29 3 'Structure model' '_chem_comp.type' 30 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 31 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 32 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 33 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 34 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 35 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 36 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 37 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 38 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 39 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 40 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 41 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0135 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? ACORN ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE1 A GLU 47 ? A O A HOH 301 ? ? 2.00 2 1 NE2 A GLN 82 ? B O A HOH 302 ? ? 2.12 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CG _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 MET _pdbx_validate_rmsd_angle.auth_seq_id_1 75 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 B _pdbx_validate_rmsd_angle.auth_atom_id_2 SD _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 MET _pdbx_validate_rmsd_angle.auth_seq_id_2 75 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 B _pdbx_validate_rmsd_angle.auth_atom_id_3 CE _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 MET _pdbx_validate_rmsd_angle.auth_seq_id_3 75 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 B _pdbx_validate_rmsd_angle.angle_value 111.12 _pdbx_validate_rmsd_angle.angle_target_value 100.20 _pdbx_validate_rmsd_angle.angle_deviation 10.92 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.60 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 10 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 15.01 _pdbx_validate_torsion.psi 78.03 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id SER _pdbx_unobs_or_zero_occ_residues.auth_seq_id 6 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id SER _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'European Research Council' 'United Kingdom' AdG-322942 1 'Australian Research Council' Australia ? 2 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 MAN 1 B MAN 1 B MAN 1 n B 2 BMA 2 B BMA 2 D BMA 1 n B 2 BMA 3 B BMA 3 D BMA 2 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DManpb1-4DManpb1-4DManpa1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,3,2/[a1122h-1a_1-5][a1122h-1b_1-5]/1-2-2/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 3 2 '[][a-D-Manp]{[(4+1)][b-D-Manp]{[(4+1)][b-D-Manp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 BMA C1 O1 1 MAN O4 HO4 sing ? 2 2 3 BMA C1 O1 2 BMA O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 MAN 1 n 2 BMA 2 n 2 BMA 3 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CHLORIDE ION' CL 4 water HOH #