HEADER OXIDOREDUCTASE 11-MAY-16 5JW6 TITLE CYSTAL STRUCTURE OF ASPARTATE SEMIALDEHYDE DEHYDROGENASE FROM TITLE 2 ASPERGILLUS FUMIGATUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARTATE-SEMIALDEHYDE DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.2.1.11; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEOSARTORYA FUMIGATA (STRAIN ATCC MYA-4609 / SOURCE 3 AF293 / CBS 101355 / FGSC A1100); SOURCE 4 ORGANISM_TAXID: 330879; SOURCE 5 STRAIN: ATCC MYA-4609 / AF293 / CBS 101355 / FGSC A1100; SOURCE 6 CELL_LINE: BL21 (DE3); SOURCE 7 GENE: AFUA_3G06830; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS ROSSMAN FOLD, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR G.P.DAHAL,R.E.VIOLA REVDAT 5 27-SEP-23 5JW6 1 REMARK REVDAT 4 11-DEC-19 5JW6 1 REMARK REVDAT 3 18-APR-18 5JW6 1 JRNL REVDAT 2 13-SEP-17 5JW6 1 REMARK REVDAT 1 11-JAN-17 5JW6 0 JRNL AUTH G.P.DAHAL,R.E.VIOLA JRNL TITL STRUCTURE OF A FUNGAL FORM OF ASPARTATE-SEMIALDEHYDE JRNL TITL 2 DEHYDROGENASE FROM ASPERGILLUS FUMIGATUS. JRNL REF ACTA CRYSTALLOGR F STRUCT V. 73 36 2017 JRNL REF 2 BIOL COMMUN JRNL REFN ESSN 2053-230X JRNL PMID 28045392 JRNL DOI 10.1107/S2053230X16020070 REMARK 2 REMARK 2 RESOLUTION. 2.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 81.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 40287 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2153 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.39 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.45 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2906 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2570 REMARK 3 BIN FREE R VALUE SET COUNT : 184 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5466 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 107 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.09 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.63000 REMARK 3 B22 (A**2) : 0.63000 REMARK 3 B33 (A**2) : -2.05000 REMARK 3 B12 (A**2) : 0.32000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.273 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.226 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.161 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.931 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5590 ; 0.017 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5398 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7556 ; 1.924 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12438 ; 1.076 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 712 ; 7.723 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 244 ;35.672 ;24.180 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 950 ;16.651 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;19.271 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 845 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6336 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1234 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2860 ; 3.652 ; 3.713 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2859 ; 3.652 ; 3.712 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3568 ; 5.563 ; 5.551 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5JW6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221314. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5-7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97927 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42496 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.390 REMARK 200 RESOLUTION RANGE LOW (A) : 81.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.22400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3HSK REMARK 200 REMARK 200 REMARK: SINGLE HEXAGONAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M AMMONIUM SULPHATE 100 MM BIS-TRIS REMARK 280 PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.38000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 134.76000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 134.76000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 67.38000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 50970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -196.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 -141.75000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 81.83940 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 TYR A 189 REMARK 465 PRO A 190 REMARK 465 LEU A 364 REMARK 465 GLU A 365 REMARK 465 HIS A 366 REMARK 465 HIS A 367 REMARK 465 HIS A 368 REMARK 465 HIS A 369 REMARK 465 HIS A 370 REMARK 465 HIS A 371 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 SER B 3 REMARK 465 TYR B 189 REMARK 465 PRO B 190 REMARK 465 LEU B 364 REMARK 465 GLU B 365 REMARK 465 HIS B 366 REMARK 465 HIS B 367 REMARK 465 HIS B 368 REMARK 465 HIS B 369 REMARK 465 HIS B 370 REMARK 465 HIS B 371 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 198 CG - SD - CE ANGL. DEV. = -15.1 DEGREES REMARK 500 ARG A 258 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 258 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 309 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG A 309 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 MET B 198 CG - SD - CE ANGL. DEV. = -10.5 DEGREES REMARK 500 ARG B 306 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG B 306 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 309 NE - CZ - NH1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG B 309 NE - CZ - NH2 ANGL. DEV. = -5.2 DEGREES REMARK 500 ARG B 323 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 6 113.52 175.63 REMARK 500 ALA A 39 -149.44 -135.35 REMARK 500 SER A 89 -47.83 119.59 REMARK 500 VAL A 126 -54.63 -133.89 REMARK 500 PHE A 147 161.25 175.79 REMARK 500 VAL A 343 -99.24 -112.63 REMARK 500 ALA A 346 -106.61 -159.36 REMARK 500 LYS A 360 -20.79 79.44 REMARK 500 ALA B 39 -157.34 -145.12 REMARK 500 SER B 40 161.12 -44.91 REMARK 500 ARG B 53 67.33 69.72 REMARK 500 PHE B 77 24.82 -140.73 REMARK 500 SER B 89 -40.47 101.37 REMARK 500 GLU B 103 16.77 80.51 REMARK 500 VAL B 126 -56.08 -120.18 REMARK 500 LYS B 234 -70.54 -78.65 REMARK 500 SER B 312 49.71 31.26 REMARK 500 LYS B 313 17.48 59.99 REMARK 500 VAL B 343 -93.33 -115.02 REMARK 500 ALA B 346 -108.26 -153.63 REMARK 500 LYS B 360 -26.95 71.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR A 4 PRO A 5 -148.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 401 DBREF 5JW6 A 1 363 UNP Q4WWR8 Q4WWR8_ASPFU 1 363 DBREF 5JW6 B 1 363 UNP Q4WWR8 Q4WWR8_ASPFU 1 363 SEQADV 5JW6 LEU A 364 UNP Q4WWR8 EXPRESSION TAG SEQADV 5JW6 GLU A 365 UNP Q4WWR8 EXPRESSION TAG SEQADV 5JW6 HIS A 366 UNP Q4WWR8 EXPRESSION TAG SEQADV 5JW6 HIS A 367 UNP Q4WWR8 EXPRESSION TAG SEQADV 5JW6 HIS A 368 UNP Q4WWR8 EXPRESSION TAG SEQADV 5JW6 HIS A 369 UNP Q4WWR8 EXPRESSION TAG SEQADV 5JW6 HIS A 370 UNP Q4WWR8 EXPRESSION TAG SEQADV 5JW6 HIS A 371 UNP Q4WWR8 EXPRESSION TAG SEQADV 5JW6 LEU B 364 UNP Q4WWR8 EXPRESSION TAG SEQADV 5JW6 GLU B 365 UNP Q4WWR8 EXPRESSION TAG SEQADV 5JW6 HIS B 366 UNP Q4WWR8 EXPRESSION TAG SEQADV 5JW6 HIS B 367 UNP Q4WWR8 EXPRESSION TAG SEQADV 5JW6 HIS B 368 UNP Q4WWR8 EXPRESSION TAG SEQADV 5JW6 HIS B 369 UNP Q4WWR8 EXPRESSION TAG SEQADV 5JW6 HIS B 370 UNP Q4WWR8 EXPRESSION TAG SEQADV 5JW6 HIS B 371 UNP Q4WWR8 EXPRESSION TAG SEQRES 1 A 371 MET ALA SER TYR PRO LYS LYS LYS CYS GLY VAL LEU GLY SEQRES 2 A 371 ALA THR GLY SER VAL GLY GLN ARG PHE ILE LEU LEU LEU SEQRES 3 A 371 ALA ASP HIS PRO PHE LEU GLU LEU HIS ALA ILE GLY ALA SEQRES 4 A 371 SER ASN ARG SER ALA GLY LYS LYS TYR LYS ASP ALA VAL SEQRES 5 A 371 ARG TRP LYS GLN THR THR ALA MET SER GLU ARG LEU SER SEQRES 6 A 371 ASN LEU VAL LEU ARG ASP CYS ARG ALA ASP GLN PHE SER SEQRES 7 A 371 ASP CYS ASP LEU VAL PHE SER GLY LEU ASN SER ASP VAL SEQRES 8 A 371 ALA GLY GLU ILE GLU MET GLU PHE ILE LYS ALA GLU ILE SEQRES 9 A 371 PRO VAL PHE SER ASN ALA LYS ASN TYR ARG LYS HIS PRO SEQRES 10 A 371 LEU VAL PRO LEU VAL VAL PRO THR VAL ASN PRO GLN HIS SEQRES 11 A 371 LEU ASP LEU ILE PRO HIS GLN ARG LYS GLU PHE GLY LEU SEQRES 12 A 371 LYS LYS GLY PHE LEU VAL CYS ASN SER ASN CYS ALA VAL SEQRES 13 A 371 ILE GLY VAL VAL ILE PRO PHE ALA ALA LEU GLN ALA LYS SEQRES 14 A 371 PHE GLY PRO VAL GLU GLU VAL GLU VAL PHE THR GLU GLN SEQRES 15 A 371 ALA VAL SER GLY ALA GLY TYR PRO GLY VAL PRO SER MET SEQRES 16 A 371 ASP ILE MET ASP ASN VAL ILE PRO TYR ILE SER GLY GLU SEQRES 17 A 371 GLU ASP LYS LEU GLU ASN GLU ALA GLN LYS ILE LEU GLY SEQRES 18 A 371 SER LEU ASN ALA ASP ALA THR ALA PHE ASP GLU GLN LYS SEQRES 19 A 371 GLY LEU THR VAL GLY ALA THR CYS THR ARG VAL GLY VAL SEQRES 20 A 371 THR ASP GLY HIS MET ALA PHE VAL SER LEU ARG PHE LYS SEQRES 21 A 371 ASN ARG PRO GLY PRO SER ALA GLU GLU VAL LYS GLN ALA SEQRES 22 A 371 MET ARG GLU TYR GLN SER GLU ALA GLN LYS LEU GLY CYS SEQRES 23 A 371 PRO SER ALA PRO ARG GLU ALA ILE LYS VAL PHE ASP GLU SEQRES 24 A 371 PRO ASP ARG PRO GLN PRO ARG LEU ASP ARG ASP ILE SER SEQRES 25 A 371 LYS GLY TYR THR VAL SER VAL GLY ARG VAL ARG GLU ALA SEQRES 26 A 371 ALA PRO GLY SER TYR PHE ASP LEU ARG PHE ALA ALA LEU SEQRES 27 A 371 SER HIS ASN THR VAL ILE GLY ALA ALA GLY SER SER ILE SEQRES 28 A 371 LEU ASN ALA GLU VAL ALA VAL ILE LYS GLY TYR ILE LEU SEQRES 29 A 371 GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 371 MET ALA SER TYR PRO LYS LYS LYS CYS GLY VAL LEU GLY SEQRES 2 B 371 ALA THR GLY SER VAL GLY GLN ARG PHE ILE LEU LEU LEU SEQRES 3 B 371 ALA ASP HIS PRO PHE LEU GLU LEU HIS ALA ILE GLY ALA SEQRES 4 B 371 SER ASN ARG SER ALA GLY LYS LYS TYR LYS ASP ALA VAL SEQRES 5 B 371 ARG TRP LYS GLN THR THR ALA MET SER GLU ARG LEU SER SEQRES 6 B 371 ASN LEU VAL LEU ARG ASP CYS ARG ALA ASP GLN PHE SER SEQRES 7 B 371 ASP CYS ASP LEU VAL PHE SER GLY LEU ASN SER ASP VAL SEQRES 8 B 371 ALA GLY GLU ILE GLU MET GLU PHE ILE LYS ALA GLU ILE SEQRES 9 B 371 PRO VAL PHE SER ASN ALA LYS ASN TYR ARG LYS HIS PRO SEQRES 10 B 371 LEU VAL PRO LEU VAL VAL PRO THR VAL ASN PRO GLN HIS SEQRES 11 B 371 LEU ASP LEU ILE PRO HIS GLN ARG LYS GLU PHE GLY LEU SEQRES 12 B 371 LYS LYS GLY PHE LEU VAL CYS ASN SER ASN CYS ALA VAL SEQRES 13 B 371 ILE GLY VAL VAL ILE PRO PHE ALA ALA LEU GLN ALA LYS SEQRES 14 B 371 PHE GLY PRO VAL GLU GLU VAL GLU VAL PHE THR GLU GLN SEQRES 15 B 371 ALA VAL SER GLY ALA GLY TYR PRO GLY VAL PRO SER MET SEQRES 16 B 371 ASP ILE MET ASP ASN VAL ILE PRO TYR ILE SER GLY GLU SEQRES 17 B 371 GLU ASP LYS LEU GLU ASN GLU ALA GLN LYS ILE LEU GLY SEQRES 18 B 371 SER LEU ASN ALA ASP ALA THR ALA PHE ASP GLU GLN LYS SEQRES 19 B 371 GLY LEU THR VAL GLY ALA THR CYS THR ARG VAL GLY VAL SEQRES 20 B 371 THR ASP GLY HIS MET ALA PHE VAL SER LEU ARG PHE LYS SEQRES 21 B 371 ASN ARG PRO GLY PRO SER ALA GLU GLU VAL LYS GLN ALA SEQRES 22 B 371 MET ARG GLU TYR GLN SER GLU ALA GLN LYS LEU GLY CYS SEQRES 23 B 371 PRO SER ALA PRO ARG GLU ALA ILE LYS VAL PHE ASP GLU SEQRES 24 B 371 PRO ASP ARG PRO GLN PRO ARG LEU ASP ARG ASP ILE SER SEQRES 25 B 371 LYS GLY TYR THR VAL SER VAL GLY ARG VAL ARG GLU ALA SEQRES 26 B 371 ALA PRO GLY SER TYR PHE ASP LEU ARG PHE ALA ALA LEU SEQRES 27 B 371 SER HIS ASN THR VAL ILE GLY ALA ALA GLY SER SER ILE SEQRES 28 B 371 LEU ASN ALA GLU VAL ALA VAL ILE LYS GLY TYR ILE LEU SEQRES 29 B 371 GLU HIS HIS HIS HIS HIS HIS HET SO4 A 401 5 HET SO4 A 402 5 HET SO4 A 403 5 HET SO4 A 404 5 HET SO4 B 401 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 5(O4 S 2-) FORMUL 8 HOH *107(H2 O) HELIX 1 AA1 GLY A 16 LEU A 26 1 11 HELIX 2 AA2 SER A 40 ALA A 44 5 5 HELIX 3 AA3 LYS A 47 ALA A 51 5 5 HELIX 4 AA4 SER A 61 LEU A 67 1 7 HELIX 5 AA5 ARG A 73 PHE A 77 5 5 HELIX 6 AA6 VAL A 91 ALA A 102 1 12 HELIX 7 AA7 ASN A 127 ASP A 132 5 6 HELIX 8 AA8 LEU A 133 GLY A 142 1 10 HELIX 9 AA9 VAL A 156 GLY A 171 1 16 HELIX 10 AB1 PRO A 193 MET A 198 1 6 HELIX 11 AB2 GLY A 207 GLY A 221 1 15 HELIX 12 AB3 SER A 266 TYR A 277 1 12 HELIX 13 AB4 SER A 279 LEU A 284 1 6 HELIX 14 AB5 GLN A 304 ARG A 309 1 6 HELIX 15 AB6 ASP A 310 TYR A 315 5 6 HELIX 16 AB7 ALA A 346 ILE A 359 1 14 HELIX 17 AB8 GLY B 16 LEU B 26 1 11 HELIX 18 AB9 LYS B 47 VAL B 52 1 6 HELIX 19 AC1 SER B 61 ASN B 66 1 6 HELIX 20 AC2 ARG B 73 SER B 78 5 6 HELIX 21 AC3 VAL B 91 ALA B 102 1 12 HELIX 22 AC4 ASN B 127 ASP B 132 5 6 HELIX 23 AC5 LEU B 133 GLY B 142 1 10 HELIX 24 AC6 VAL B 156 GLY B 171 1 16 HELIX 25 AC7 PRO B 193 MET B 198 1 6 HELIX 26 AC8 GLY B 207 GLY B 221 1 15 HELIX 27 AC9 SER B 266 TYR B 277 1 12 HELIX 28 AD1 SER B 279 LEU B 284 1 6 HELIX 29 AD2 GLN B 304 ARG B 309 1 6 HELIX 30 AD3 ASP B 310 TYR B 315 5 6 HELIX 31 AD4 ALA B 346 ILE B 359 1 14 HELIX 32 AD5 LYS B 360 TYR B 362 5 3 SHEET 1 AA1 6 ARG A 70 ASP A 71 0 SHEET 2 AA1 6 LEU A 32 ALA A 39 1 N ILE A 37 O ARG A 70 SHEET 3 AA1 6 LYS A 7 LEU A 12 1 N CYS A 9 O HIS A 35 SHEET 4 AA1 6 LEU A 82 SER A 85 1 O PHE A 84 N LEU A 12 SHEET 5 AA1 6 VAL A 106 SER A 108 1 O PHE A 107 N VAL A 83 SHEET 6 AA1 6 LEU A 148 CYS A 150 1 O VAL A 149 N SER A 108 SHEET 1 AA2 6 THR A 237 ARG A 244 0 SHEET 2 AA2 6 VAL A 173 GLN A 182 1 N VAL A 178 O GLY A 239 SHEET 3 AA2 6 HIS A 251 PHE A 259 -1 O PHE A 254 N PHE A 179 SHEET 4 AA2 6 LEU A 333 SER A 339 -1 O LEU A 333 N LEU A 257 SHEET 5 AA2 6 VAL A 317 GLU A 324 -1 N GLY A 320 O ALA A 336 SHEET 6 AA2 6 ILE A 294 VAL A 296 1 N LYS A 295 O VAL A 319 SHEET 1 AA3 2 SER A 222 LEU A 223 0 SHEET 2 AA3 2 PHE A 230 ASP A 231 -1 O ASP A 231 N SER A 222 SHEET 1 AA4 6 ARG B 70 ASP B 71 0 SHEET 2 AA4 6 LEU B 32 ALA B 39 1 N ALA B 39 O ARG B 70 SHEET 3 AA4 6 LYS B 7 LEU B 12 1 N CYS B 9 O GLU B 33 SHEET 4 AA4 6 LEU B 82 SER B 85 1 O PHE B 84 N LEU B 12 SHEET 5 AA4 6 VAL B 106 SER B 108 1 O PHE B 107 N SER B 85 SHEET 6 AA4 6 LEU B 148 CYS B 150 1 O VAL B 149 N SER B 108 SHEET 1 AA5 6 THR B 237 ARG B 244 0 SHEET 2 AA5 6 VAL B 173 GLN B 182 1 N VAL B 176 O GLY B 239 SHEET 3 AA5 6 HIS B 251 PHE B 259 -1 O SER B 256 N GLU B 177 SHEET 4 AA5 6 LEU B 333 SER B 339 -1 O LEU B 333 N LEU B 257 SHEET 5 AA5 6 VAL B 317 GLU B 324 -1 N SER B 318 O LEU B 338 SHEET 6 AA5 6 ILE B 294 VAL B 296 1 N LYS B 295 O VAL B 319 SHEET 1 AA6 2 SER B 222 LEU B 223 0 SHEET 2 AA6 2 PHE B 230 ASP B 231 -1 O ASP B 231 N SER B 222 CISPEP 1 PRO A 5 LYS A 6 0 24.22 CISPEP 2 ARG A 262 PRO A 263 0 -1.00 CISPEP 3 ARG A 302 PRO A 303 0 1.68 CISPEP 4 PRO B 5 LYS B 6 0 13.10 CISPEP 5 ARG B 262 PRO B 263 0 -0.44 CISPEP 6 ARG B 302 PRO B 303 0 4.90 SITE 1 AC1 4 ARG A 114 ASN A 153 CYS A 154 LYS A 211 SITE 1 AC2 4 THR A 15 ALA A 39 SER A 40 SER A 43 SITE 1 AC3 4 SER A 17 GLY A 186 ALA A 187 GLY A 188 SITE 1 AC4 2 SER A 61 ARG A 63 SITE 1 AC5 4 ARG B 114 ASN B 153 CYS B 154 LYS B 211 CRYST1 94.500 94.500 202.140 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010582 0.006110 0.000000 0.00000 SCALE2 0.000000 0.012219 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004947 0.00000