HEADER TRANSPORT PROTEIN 12-MAY-16 5JX2 TITLE CRYSTAL STRUCTURE OF MGLB-2 (TP0684) FROM TREPONEMA PALLIDUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSE/GALACTOSE-BINDING LIPOPROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TREPONEMA PALLIDUM (STRAIN NICHOLS); SOURCE 3 ORGANISM_TAXID: 243276; SOURCE 4 STRAIN: NICHOLS; SOURCE 5 GENE: MGLB, TPP38, TP_0684; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLUCOSE-BINDING PROTEIN, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.A.BRAUTIGAM,R.K.DEKA,M.V.NORGARD REVDAT 4 15-NOV-23 5JX2 1 ATOM REVDAT 3 11-DEC-19 5JX2 1 REMARK REVDAT 2 06-SEP-17 5JX2 1 REMARK REVDAT 1 31-AUG-16 5JX2 0 JRNL AUTH C.A.BRAUTIGAM,R.K.DEKA,W.Z.LIU,M.V.NORGARD JRNL TITL THE TP0684 (MGLB-2) LIPOPROTEIN OF TREPONEMA PALLIDUM: A JRNL TITL 2 GLUCOSE-BINDING PROTEIN WITH DIVERGENT TOPOLOGY. JRNL REF PLOS ONE V. 11 61022 2016 JRNL REFN ESSN 1932-6203 JRNL PMID 27536942 JRNL DOI 10.1371/JOURNAL.PONE.0161022 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 27622 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1393 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.7913 - 4.4152 1.00 2811 165 0.1477 0.1786 REMARK 3 2 4.4152 - 3.5054 1.00 2729 138 0.1602 0.2279 REMARK 3 3 3.5054 - 3.0625 1.00 2692 152 0.1909 0.2238 REMARK 3 4 3.0625 - 2.7826 1.00 2677 153 0.2107 0.2327 REMARK 3 5 2.7826 - 2.5832 1.00 2675 136 0.1951 0.2416 REMARK 3 6 2.5832 - 2.4310 1.00 2673 134 0.1876 0.2530 REMARK 3 7 2.4310 - 2.3092 1.00 2681 137 0.1956 0.2050 REMARK 3 8 2.3092 - 2.2087 0.90 2409 115 0.3183 0.3494 REMARK 3 9 2.2087 - 2.1237 0.94 2486 135 0.2134 0.2513 REMARK 3 10 2.1237 - 2.0504 0.91 2396 128 0.2582 0.3033 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2845 REMARK 3 ANGLE : 0.735 3851 REMARK 3 CHIRALITY : 0.027 423 REMARK 3 PLANARITY : 0.003 507 REMARK 3 DIHEDRAL : 14.159 1037 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): 90.4943 10.6314 25.4780 REMARK 3 T TENSOR REMARK 3 T11: 0.3533 T22: 0.3271 REMARK 3 T33: 0.3650 T12: -0.0399 REMARK 3 T13: -0.0129 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 2.8341 L22: 2.5318 REMARK 3 L33: 2.8875 L12: -1.0936 REMARK 3 L13: 0.7487 L23: -1.4841 REMARK 3 S TENSOR REMARK 3 S11: 0.1443 S12: -0.1290 S13: -0.7285 REMARK 3 S21: 0.0166 S22: 0.0101 S23: 0.2855 REMARK 3 S31: 0.4273 S32: 0.0591 S33: -0.2011 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 65 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): 78.8146 27.5709 4.5208 REMARK 3 T TENSOR REMARK 3 T11: 0.2562 T22: 0.3615 REMARK 3 T33: 0.2332 T12: -0.0194 REMARK 3 T13: 0.0047 T23: -0.0236 REMARK 3 L TENSOR REMARK 3 L11: 2.1447 L22: 1.9283 REMARK 3 L33: 2.3713 L12: 0.2550 REMARK 3 L13: -0.0042 L23: -0.7267 REMARK 3 S TENSOR REMARK 3 S11: -0.0084 S12: 0.2864 S13: -0.0789 REMARK 3 S21: -0.2144 S22: 0.0873 S23: 0.0730 REMARK 3 S31: 0.0437 S32: -0.1976 S33: -0.0873 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 171 THROUGH 258 ) REMARK 3 ORIGIN FOR THE GROUP (A): 96.9290 23.4040 19.7599 REMARK 3 T TENSOR REMARK 3 T11: 0.1844 T22: 0.2861 REMARK 3 T33: 0.2466 T12: -0.0153 REMARK 3 T13: 0.0227 T23: -0.0305 REMARK 3 L TENSOR REMARK 3 L11: 1.5553 L22: 0.9732 REMARK 3 L33: 2.6196 L12: -0.6793 REMARK 3 L13: 0.9340 L23: -0.7143 REMARK 3 S TENSOR REMARK 3 S11: -0.0082 S12: -0.0078 S13: -0.1033 REMARK 3 S21: -0.0028 S22: -0.0022 S23: -0.0887 REMARK 3 S31: 0.0505 S32: 0.2549 S33: 0.0159 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 259 THROUGH 293 ) REMARK 3 ORIGIN FOR THE GROUP (A): 96.3748 22.4775 24.2909 REMARK 3 T TENSOR REMARK 3 T11: 0.2359 T22: 0.3583 REMARK 3 T33: 0.2258 T12: 0.0257 REMARK 3 T13: 0.0160 T23: -0.0671 REMARK 3 L TENSOR REMARK 3 L11: 2.8356 L22: 3.9179 REMARK 3 L33: 3.7653 L12: -0.0719 REMARK 3 L13: 0.8800 L23: -2.1891 REMARK 3 S TENSOR REMARK 3 S11: 0.0728 S12: -0.1005 S13: -0.0559 REMARK 3 S21: -0.0156 S22: 0.0080 S23: -0.0187 REMARK 3 S31: -0.0897 S32: 0.4150 S33: -0.0529 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 294 THROUGH 378 ) REMARK 3 ORIGIN FOR THE GROUP (A): 105.4524 3.3169 22.8695 REMARK 3 T TENSOR REMARK 3 T11: 0.5290 T22: 0.5425 REMARK 3 T33: 0.5886 T12: 0.1806 REMARK 3 T13: 0.0374 T23: -0.0537 REMARK 3 L TENSOR REMARK 3 L11: 3.8024 L22: 3.3247 REMARK 3 L33: 3.6470 L12: 0.2432 REMARK 3 L13: 0.4899 L23: -0.4464 REMARK 3 S TENSOR REMARK 3 S11: 0.1349 S12: 0.2062 S13: -0.8634 REMARK 3 S21: -0.3110 S22: -0.0888 S23: -0.1533 REMARK 3 S31: 1.0069 S32: 0.4420 S33: -0.0372 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JX2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221366. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97932 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28333 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 36.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.07500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PH 6.5 20% PEG MME REMARK 280 5000, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.12500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.12500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 38.77800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 65.01250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 38.77800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 65.01250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 44.12500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 38.77800 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 65.01250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 44.12500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 38.77800 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 65.01250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 672 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -8 REMARK 465 GLY A -7 REMARK 465 SER A -6 REMARK 465 ASP A -5 REMARK 465 LYS A -4 REMARK 465 ILE A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 GLU A 4 REMARK 465 ASN A 5 REMARK 465 LEU A 6 REMARK 465 TYR A 7 REMARK 465 PHE A 8 REMARK 465 GLN A 9 REMARK 465 GLY A 10 REMARK 465 LEU A 26 REMARK 465 THR A 27 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 19 -40.03 69.14 REMARK 500 ASN A 36 31.40 -97.83 REMARK 500 ASP A 86 113.09 -167.16 REMARK 500 GLN A 114 73.98 -107.68 REMARK 500 ALA A 162 -121.86 48.35 REMARK 500 ASP A 195 -31.50 132.02 REMARK 500 GLU A 208 -76.84 -104.52 REMARK 500 ASN A 279 17.54 -152.37 REMARK 500 ALA A 317 -57.88 -121.16 REMARK 500 SER A 368 30.07 -94.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 71 OD1 REMARK 620 2 ASN A 73 OD1 77.5 REMARK 620 3 ASP A 75 OD1 82.5 67.6 REMARK 620 4 ILE A 77 O 85.2 146.9 82.5 REMARK 620 5 ASP A 166 OD2 99.7 139.0 153.3 71.3 REMARK 620 6 HOH A 505 O 93.4 66.2 133.4 143.7 73.2 REMARK 620 7 HOH A 516 O 177.0 105.3 99.2 92.6 77.7 87.2 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BTB A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404 DBREF 5JX2 A 11 378 UNP Q08255 MGLB_TREPA 36 403 SEQADV 5JX2 MET A -8 UNP Q08255 INITIATING METHIONINE SEQADV 5JX2 GLY A -7 UNP Q08255 EXPRESSION TAG SEQADV 5JX2 SER A -6 UNP Q08255 EXPRESSION TAG SEQADV 5JX2 ASP A -5 UNP Q08255 EXPRESSION TAG SEQADV 5JX2 LYS A -4 UNP Q08255 EXPRESSION TAG SEQADV 5JX2 ILE A -3 UNP Q08255 EXPRESSION TAG SEQADV 5JX2 HIS A -2 UNP Q08255 EXPRESSION TAG SEQADV 5JX2 HIS A -1 UNP Q08255 EXPRESSION TAG SEQADV 5JX2 HIS A 0 UNP Q08255 EXPRESSION TAG SEQADV 5JX2 HIS A 1 UNP Q08255 EXPRESSION TAG SEQADV 5JX2 HIS A 2 UNP Q08255 EXPRESSION TAG SEQADV 5JX2 HIS A 3 UNP Q08255 EXPRESSION TAG SEQADV 5JX2 GLU A 4 UNP Q08255 EXPRESSION TAG SEQADV 5JX2 ASN A 5 UNP Q08255 EXPRESSION TAG SEQADV 5JX2 LEU A 6 UNP Q08255 EXPRESSION TAG SEQADV 5JX2 TYR A 7 UNP Q08255 EXPRESSION TAG SEQADV 5JX2 PHE A 8 UNP Q08255 EXPRESSION TAG SEQADV 5JX2 GLN A 9 UNP Q08255 EXPRESSION TAG SEQADV 5JX2 GLY A 10 UNP Q08255 EXPRESSION TAG SEQRES 1 A 387 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS GLU SEQRES 2 A 387 ASN LEU TYR PHE GLN GLY ARG ASP LYS PRO LEU VAL PHE SEQRES 3 A 387 PHE ASN ARG GLN PRO SER ASP PRO LEU THR GLY LYS VAL SEQRES 4 A 387 ASP MET ALA ALA MET ASN TRP ASN ASP LYS THR TYR TYR SEQRES 5 A 387 VAL GLY PHE ASP ALA LYS PHE GLY GLY SER ILE GLN GLY SEQRES 6 A 387 LYS MET ILE LEU ASP PHE LEU ALA SER SER GLU SER SER SEQRES 7 A 387 VAL ASP ARG ASN GLY ASP GLY ILE ILE GLY TYR VAL LEU SEQRES 8 A 387 CYS ILE GLY ASP VAL GLY HIS ASN ASP SER LYS VAL ARG SEQRES 9 A 387 THR GLU GLY ILE ARG ARG ALA LEU GLY THR TRP THR GLY SEQRES 10 A 387 SER SER ASP PRO GLY GLN ALA LYS GLU GLY GLN ALA VAL SEQRES 11 A 387 VAL GLY GLY LYS SER TYR LYS VAL VAL GLU LEU GLU GLY SEQRES 12 A 387 LYS ALA MET THR GLY THR ASP GLY SER THR TRP ASN THR SEQRES 13 A 387 ASN SER ALA THR GLU SER MET GLY SER TRP VAL ALA LYS SEQRES 14 A 387 PHE ALA ASP LYS ILE ASP LEU VAL ILE SER ASN ASN ASP SEQRES 15 A 387 GLY MET ALA MET GLY CYS LEU GLN ALA SER ASN TYR PRO SEQRES 16 A 387 ARG GLY LEU PRO ILE PHE GLY TYR ASP ALA ASN ALA ASP SEQRES 17 A 387 ALA VAL GLU SER VAL GLY LYS GLY GLU LEU THR GLY THR SEQRES 18 A 387 VAL SER GLN ASN VAL ASP ALA GLN ALA VAL ALA VAL LEU SEQRES 19 A 387 GLN ILE ILE ARG ASN LEU LEU ASP GLY SER SER GLY GLU SEQRES 20 A 387 ASP VAL VAL ALA ASN GLY ILE SER ARG PRO ASP ALA HIS SEQRES 21 A 387 GLY ASN ALY ILE SER ALA PRO VAL GLN TYR TRP GLU ASP SEQRES 22 A 387 VAL LYS ALA ILE MET ALA ASP ASN SER GLU VAL THR SER SEQRES 23 A 387 ALA ASN TRP LYS GLU TYR THR ARG GLY ALA ARG ASP ALA SEQRES 24 A 387 GLY VAL ARG GLN VAL SER ALA PRO THR LYS LYS VAL LEU SEQRES 25 A 387 LEU THR VAL HIS ASN ALA SER ASN ASP PHE LEU ALA SER SEQRES 26 A 387 ALA TYR LEU PRO ALA LEU LYS HIS TYR ALA PRO LEU LEU SEQRES 27 A 387 ASN VAL ASP LEU THR VAL VAL GLN GLY ASP GLY GLN ASN SEQRES 28 A 387 GLU LEU SER CYS LEU ASP LYS PHE THR ASN LEU ASP MET SEQRES 29 A 387 PHE ASP ALA PHE ALA VAL ASN MET VAL LYS THR ASN SER SEQRES 30 A 387 GLY ALA ASP TYR THR ASP LYS LEU LYS TYR MODRES 5JX2 ALY A 254 LYS MODIFIED RESIDUE HET ALY A 254 22 HET CA A 401 1 HET BTB A 402 33 HET EDO A 403 10 HET EDO A 404 10 HETNAM ALY N(6)-ACETYLLYSINE HETNAM CA CALCIUM ION HETNAM BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL- HETNAM 2 BTB PROPANE-1,3-DIOL HETNAM EDO 1,2-ETHANEDIOL HETSYN BTB BIS-TRIS BUFFER HETSYN EDO ETHYLENE GLYCOL FORMUL 1 ALY C8 H16 N2 O3 FORMUL 2 CA CA 2+ FORMUL 3 BTB C8 H19 N O5 FORMUL 4 EDO 2(C2 H6 O2) FORMUL 6 HOH *194(H2 O) HELIX 1 AA1 ASP A 31 ASN A 36 1 6 HELIX 2 AA2 PHE A 50 SER A 65 1 16 HELIX 3 AA3 GLU A 67 ASP A 71 5 5 HELIX 4 AA4 HIS A 89 LEU A 103 1 15 HELIX 5 AA5 ASN A 146 ALA A 162 1 17 HELIX 6 AA6 ASN A 172 LEU A 180 1 9 HELIX 7 AA7 ASN A 197 LYS A 206 1 10 HELIX 8 AA8 ASN A 216 ASP A 233 1 18 HELIX 9 AA9 GLY A 237 ASN A 243 1 7 HELIX 10 AB1 GLU A 263 VAL A 265 5 3 HELIX 11 AB2 ASN A 279 TYR A 283 5 5 HELIX 12 AB3 ASN A 311 ALA A 317 1 7 HELIX 13 AB4 ALA A 317 ALA A 326 1 10 HELIX 14 AB5 PRO A 327 LEU A 329 5 3 HELIX 15 AB6 GLU A 343 ASP A 348 1 6 HELIX 16 AB7 ASN A 352 PHE A 356 5 5 HELIX 17 AB8 SER A 368 LEU A 376 1 9 SHEET 1 AA1 7 VAL A 259 TRP A 262 0 SHEET 2 AA1 7 ALA A 267 ALA A 270 -1 O ALA A 267 N TRP A 262 SHEET 3 AA1 7 THR A 41 PHE A 46 1 N TYR A 43 O ILE A 268 SHEET 4 AA1 7 LEU A 15 PHE A 18 1 N PHE A 17 O TYR A 42 SHEET 5 AA1 7 ALA A 358 VAL A 361 1 O PHE A 359 N VAL A 16 SHEET 6 AA1 7 LYS A 300 VAL A 306 1 N THR A 305 O ALA A 360 SHEET 7 AA1 7 VAL A 331 GLN A 337 1 O THR A 334 N LEU A 304 SHEET 1 AA2 5 GLY A 118 VAL A 122 0 SHEET 2 AA2 5 LYS A 125 ALA A 136 -1 O VAL A 129 N GLY A 118 SHEET 3 AA2 5 ILE A 77 ILE A 84 1 N ILE A 78 O LYS A 128 SHEET 4 AA2 5 ILE A 165 SER A 170 1 O ASP A 166 N GLY A 79 SHEET 5 AA2 5 ILE A 191 PHE A 192 1 O PHE A 192 N VAL A 168 SHEET 1 AA3 2 THR A 212 SER A 214 0 SHEET 2 AA3 2 SER A 273 VAL A 275 -1 O SER A 273 N SER A 214 LINK C ASN A 253 N ALY A 254 1555 1555 1.33 LINK C ALY A 254 N ILE A 255 1555 1555 1.33 LINK OD1 ASP A 71 CA CA A 401 1555 1555 2.37 LINK OD1 ASN A 73 CA CA A 401 1555 1555 2.50 LINK OD1 ASP A 75 CA CA A 401 1555 1555 2.45 LINK O ILE A 77 CA CA A 401 1555 1555 2.30 LINK OD2 ASP A 166 CA CA A 401 1555 1555 2.66 LINK CA CA A 401 O HOH A 505 1555 1555 2.51 LINK CA CA A 401 O HOH A 516 1555 1555 2.46 SITE 1 AC1 7 ASP A 71 ASN A 73 ASP A 75 ILE A 77 SITE 2 AC1 7 ASP A 166 HOH A 505 HOH A 516 SITE 1 AC2 5 HIS A 89 ASP A 91 ARG A 95 ASN A 172 SITE 2 AC2 5 ASP A 195 SITE 1 AC3 4 ALA A 48 ASP A 91 ARG A 95 TYR A 194 SITE 1 AC4 5 PHE A 50 GLU A 97 ARG A 101 TRP A 262 SITE 2 AC4 5 HOH A 538 CRYST1 77.556 130.025 88.250 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012894 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007691 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011331 0.00000