HEADER IMMUNE SYSTEM 13-MAY-16 5JXV TITLE SOLID-STATE MAS NMR STRUCTURE OF IMMUNOGLOBULIN BETA 1 BINDING DOMAIN TITLE 2 OF PROTEIN G (GB1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMMUNOGLOBULIN G-BINDING PROTEIN G; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS DYSGALACTIAE SUBSP. EQUISIMILIS; SOURCE 3 ORGANISM_TAXID: 119602; SOURCE 4 GENE: WH79_02070; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS GLOBULAR, ALPHA BETA, IMMUNE SYSTEM EXPDTA SOLID-STATE NMR NUMMDL 20 AUTHOR L.B.ANDREAS,K.JAUDZEMS,J.STANEK,D.LALLI,A.BERTARELLO,T.LE MARCHAND, AUTHOR 2 D.CALA-DE PAEPE,S.KOTELOVICA,I.AKOPJANA,B.KNOTT,S.WEGNER,F.ENGELKE, AUTHOR 3 A.LESAGE,L.EMSLEY,K.TARS,T.HERRMANN,G.PINTACUDA REVDAT 7 19-JUN-24 5JXV 1 REMARK REVDAT 6 21-AUG-19 5JXV 1 REMARK REVDAT 5 28-FEB-18 5JXV 1 REMARK REVDAT 4 07-FEB-18 5JXV 1 REMARK REVDAT 3 31-AUG-16 5JXV 1 JRNL REVDAT 2 17-AUG-16 5JXV 1 JRNL REVDAT 1 10-AUG-16 5JXV 0 JRNL AUTH L.B.ANDREAS,K.JAUDZEMS,J.STANEK,D.LALLI,A.BERTARELLO, JRNL AUTH 2 T.LE MARCHAND,D.CALA-DE PAEPE,S.KOTELOVICA,I.AKOPJANA, JRNL AUTH 3 B.KNOTT,S.WEGNER,F.ENGELKE,A.LESAGE,L.EMSLEY,K.TARS, JRNL AUTH 4 T.HERRMANN,G.PINTACUDA JRNL TITL STRUCTURE OF FULLY PROTONATED PROTEINS BY PROTON-DETECTED JRNL TITL 2 MAGIC-ANGLE SPINNING NMR. JRNL REF PROC.NATL.ACAD.SCI.USA V. 113 9187 2016 JRNL REFN ESSN 1091-6490 JRNL PMID 27489348 JRNL DOI 10.1073/PNAS.1602248113 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CANDID 2.6.0 REMARK 3 AUTHORS : HERRMANN, GUNTERT AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JXV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221368. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 283 REMARK 210 PH : 5.6 REMARK 210 IONIC STRENGTH : 12.5 REMARK 210 PRESSURE : VARIABLE ATM REMARK 210 SAMPLE CONTENTS : 12.5 MM SODIUM PHOSPHATE, 45 % REMARK 210 METHYL-2,4-PENTANE DIOL, 22.5 % REMARK 210 ISOPROPYL ALCOHOL, 800 MG/ML [U- REMARK 210 99% 13C; U-99% 15N] B1 DOMAIN OF REMARK 210 IMMUNOGLOBULIN G-BINDING PROTEIN REMARK 210 G, H20/MPD/IPA REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : (H)NCAH; (H)N(CO)CAH; (H)COCAH; REMARK 210 (H)CO(N)CAH; (H)CANH; (H)(CO) REMARK 210 CA(CO)NH; (H)(CA)CB(CA)NH; (H) REMARK 210 N(CA)(CO)NH; (H)N(CO)(CA)NH; (H) REMARK 210 CCH-TOCSY; (H)NHH-RFDR; (H)CHH- REMARK 210 RFDR; H(H)CH-RFDR-AROMATIC13C REMARK 210 SPECTROMETER FIELD STRENGTH : 1000 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CARA, SPARKY, TOPSPIN, TALOS, REMARK 210 NMRPIPE REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 80 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 217 REMARK 217 SOLID STATE NMR STUDY REMARK 217 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLID REMARK 217 STATE NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 217 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 217 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 2 ASN A 8 69.61 -112.49 REMARK 500 3 ASN A 8 68.75 -113.30 REMARK 500 4 ASN A 8 66.32 -113.93 REMARK 500 7 ASN A 8 68.96 -119.74 REMARK 500 10 ASN A 8 68.71 -115.61 REMARK 500 11 ASN A 8 66.14 -112.93 REMARK 500 12 ASN A 8 70.12 -110.28 REMARK 500 13 ASN A 8 68.52 -113.41 REMARK 500 15 ASN A 8 67.78 -113.07 REMARK 500 16 ASN A 8 69.09 -118.69 REMARK 500 17 ASN A 8 66.18 -112.16 REMARK 500 18 ASN A 8 65.37 -115.10 REMARK 500 19 ASN A 8 68.89 -108.94 REMARK 500 20 ASN A 8 66.40 -105.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30088 RELATED DB: BMRB DBREF1 5JXV A 1 56 UNP A0A0F5P4G8_STREQ DBREF2 5JXV A A0A0F5P4G8 227 282 SEQADV 5JXV MET A 1 UNP A0A0F5P4G ASP 227 INITIATING METHIONINE SEQADV 5JXV GLN A 2 UNP A0A0F5P4G THR 228 ENGINEERED MUTATION SEQRES 1 A 56 MET GLN TYR LYS LEU ILE LEU ASN GLY LYS THR LEU LYS SEQRES 2 A 56 GLY GLU THR THR THR GLU ALA VAL ASP ALA ALA THR ALA SEQRES 3 A 56 GLU LYS VAL PHE LYS GLN TYR ALA ASN ASP ASN GLY VAL SEQRES 4 A 56 ASP GLY GLU TRP THR TYR ASP ASP ALA THR LYS THR PHE SEQRES 5 A 56 THR VAL THR GLU HELIX 1 AA1 ASP A 22 ASN A 37 1 16 SHEET 1 AA1 4 LYS A 13 GLU A 19 0 SHEET 2 AA1 4 GLN A 2 ASN A 8 -1 N LEU A 5 O THR A 16 SHEET 3 AA1 4 THR A 51 THR A 55 1 O VAL A 54 N ASN A 8 SHEET 4 AA1 4 GLU A 42 ASP A 46 -1 N GLU A 42 O THR A 55 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1