HEADER CELL ADHESION/IMMUNE SYSTEM 14-MAY-16 5JYM TITLE HUMAN P-CADHERIN EC12 WITH SCFV TSP11 BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: CADHERIN-3; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 108-320; COMPND 5 SYNONYM: PLACENTAL CADHERIN,P-CADHERIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ANTIBODY SCFV TSP11; COMPND 9 CHAIN: B, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CDH3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VARIANT: ROSETTA2; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 14 ORGANISM_COMMON: MOUSE; SOURCE 15 ORGANISM_TAXID: 10090; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PRA2 KEYWDS CADHERIN, CELL ADHESION, ANTIBODY, PROTEIN-PROTEIN INTERACTION, KEYWDS 2 OXIDOREDUCTASE, CELL ADHESION-IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.M.M.CAAVEIRO,S.KUDO,K.TSUMOTO REVDAT 4 08-NOV-23 5JYM 1 LINK REVDAT 3 19-FEB-20 5JYM 1 REMARK REVDAT 2 18-JAN-17 5JYM 1 JRNL REVDAT 1 28-DEC-16 5JYM 0 JRNL AUTH S.KUDO,J.M.M.CAAVEIRO,S.NAGATOISHI,T.MIYAFUSA,T.MATSUURA, JRNL AUTH 2 Y.SUDOU,K.TSUMOTO JRNL TITL DISRUPTION OF CELL ADHESION BY AN ANTIBODY TARGETING THE JRNL TITL 2 CELL-ADHESIVE INTERMEDIATE (X-DIMER) OF HUMAN P-CADHERIN JRNL REF SCI REP V. 7 39518 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 28045038 JRNL DOI 10.1038/SREP39518 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 99.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 34984 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1832 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.51 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2428 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.05 REMARK 3 BIN R VALUE (WORKING SET) : 0.3220 REMARK 3 BIN FREE R VALUE SET COUNT : 124 REMARK 3 BIN FREE R VALUE : 0.3660 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6746 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 119 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.10000 REMARK 3 B22 (A**2) : -2.88000 REMARK 3 B33 (A**2) : 2.99000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.534 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.299 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.245 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.685 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.923 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.904 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6917 ; 0.011 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 6285 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9412 ; 1.468 ; 1.940 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14549 ; 0.966 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 865 ; 6.986 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 295 ;35.974 ;24.983 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1088 ;15.162 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;16.866 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1042 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7805 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1533 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3487 ; 1.736 ; 3.020 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3486 ; 1.735 ; 3.020 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4343 ; 2.814 ; 4.525 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4344 ; 2.813 ; 4.525 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3430 ; 2.046 ; 3.203 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3428 ; 2.046 ; 3.203 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5069 ; 3.335 ; 4.711 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 7307 ; 5.020 ;23.800 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 7278 ; 4.993 ;23.764 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 2 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1 213 C 1 213 11549 0.12 0.05 REMARK 3 2 B 1 247 D 1 247 11843 0.10 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 213 REMARK 3 RESIDUE RANGE : A 301 A 303 REMARK 3 ORIGIN FOR THE GROUP (A): -1.2751 37.5287 -10.0325 REMARK 3 T TENSOR REMARK 3 T11: 0.0918 T22: 0.1166 REMARK 3 T33: 0.0324 T12: -0.0201 REMARK 3 T13: -0.0217 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 1.8803 L22: 2.3465 REMARK 3 L33: 0.4381 L12: -1.6756 REMARK 3 L13: 0.3681 L23: -0.5806 REMARK 3 S TENSOR REMARK 3 S11: 0.0611 S12: 0.0534 S13: -0.1886 REMARK 3 S21: -0.0254 S22: -0.0361 S23: 0.0688 REMARK 3 S31: 0.0723 S32: 0.0075 S33: -0.0250 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 247 REMARK 3 ORIGIN FOR THE GROUP (A): -1.7303 75.9888 -16.5530 REMARK 3 T TENSOR REMARK 3 T11: 0.2268 T22: 0.1485 REMARK 3 T33: 0.1416 T12: -0.0862 REMARK 3 T13: -0.0773 T23: 0.0859 REMARK 3 L TENSOR REMARK 3 L11: 3.3426 L22: 3.8121 REMARK 3 L33: 1.7379 L12: -1.3799 REMARK 3 L13: 0.5332 L23: -0.4369 REMARK 3 S TENSOR REMARK 3 S11: -0.0951 S12: 0.3716 S13: 0.6399 REMARK 3 S21: -0.0568 S22: -0.1629 S23: -0.3307 REMARK 3 S31: -0.5918 S32: 0.3168 S33: 0.2579 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 213 REMARK 3 RESIDUE RANGE : C 301 C 303 REMARK 3 ORIGIN FOR THE GROUP (A): -19.7674 62.2200 -43.9681 REMARK 3 T TENSOR REMARK 3 T11: 0.0418 T22: 0.1505 REMARK 3 T33: 0.0850 T12: -0.0120 REMARK 3 T13: -0.0126 T23: 0.0249 REMARK 3 L TENSOR REMARK 3 L11: 0.4267 L22: 2.1452 REMARK 3 L33: 1.1671 L12: 0.0027 REMARK 3 L13: 0.0109 L23: -0.9486 REMARK 3 S TENSOR REMARK 3 S11: 0.0571 S12: 0.0401 S13: 0.1234 REMARK 3 S21: 0.1941 S22: -0.2009 S23: -0.2068 REMARK 3 S31: -0.1960 S32: 0.0900 S33: 0.1439 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 247 REMARK 3 ORIGIN FOR THE GROUP (A): -18.0903 22.1942 -41.0637 REMARK 3 T TENSOR REMARK 3 T11: 0.1374 T22: 0.1331 REMARK 3 T33: 0.2803 T12: -0.0068 REMARK 3 T13: -0.0114 T23: -0.0986 REMARK 3 L TENSOR REMARK 3 L11: 3.0931 L22: 3.7481 REMARK 3 L33: 2.0841 L12: 0.3623 REMARK 3 L13: -0.5654 L23: 1.0996 REMARK 3 S TENSOR REMARK 3 S11: -0.0642 S12: 0.3043 S13: -0.8551 REMARK 3 S21: 0.3150 S22: 0.0687 S23: -0.1378 REMARK 3 S31: 0.4940 S32: -0.0122 S33: -0.0045 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5JYM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221427. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JAN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM 7.0.9 REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36872 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 99.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.54000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.5 REMARK 200 STARTING MODEL: 1QOK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 150 MM CACL2, 16% PEG 3350, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.71500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 99.91000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.71500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 99.91000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN B 42 REMARK 465 GLY B 43 REMARK 465 SER B 121 REMARK 465 ALA B 122 REMARK 465 SER B 123 REMARK 465 ALA B 124 REMARK 465 GLY B 125 REMARK 465 GLY B 126 REMARK 465 GLY B 127 REMARK 465 GLY B 128 REMARK 465 SER B 129 REMARK 465 GLY B 130 REMARK 465 GLY B 131 REMARK 465 GLY B 132 REMARK 465 GLY B 133 REMARK 465 SER B 134 REMARK 465 GLY B 135 REMARK 465 GLY B 136 REMARK 465 GLY B 137 REMARK 465 GLY B 138 REMARK 465 SER B 139 REMARK 465 ASP B 140 REMARK 465 ILE B 248 REMARK 465 LYS B 249 REMARK 465 SER B 250 REMARK 465 ALA B 251 REMARK 465 HIS B 252 REMARK 465 HIS B 253 REMARK 465 HIS B 254 REMARK 465 HIS B 255 REMARK 465 HIS B 256 REMARK 465 HIS B 257 REMARK 465 GLY D 8 REMARK 465 THR D 9 REMARK 465 GLU D 10 REMARK 465 GLN D 42 REMARK 465 GLY D 43 REMARK 465 ALA D 122 REMARK 465 SER D 123 REMARK 465 ALA D 124 REMARK 465 GLY D 125 REMARK 465 GLY D 126 REMARK 465 GLY D 127 REMARK 465 GLY D 128 REMARK 465 SER D 129 REMARK 465 GLY D 130 REMARK 465 GLY D 131 REMARK 465 GLY D 132 REMARK 465 GLY D 133 REMARK 465 SER D 134 REMARK 465 GLY D 135 REMARK 465 GLY D 136 REMARK 465 GLY D 137 REMARK 465 GLY D 138 REMARK 465 SER D 139 REMARK 465 ASP D 140 REMARK 465 ILE D 248 REMARK 465 LYS D 249 REMARK 465 SER D 250 REMARK 465 ALA D 251 REMARK 465 HIS D 252 REMARK 465 HIS D 253 REMARK 465 HIS D 254 REMARK 465 HIS D 255 REMARK 465 HIS D 256 REMARK 465 HIS D 257 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 54 CG GLU A 54 CD 0.092 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 108 CA - CB - CG ANGL. DEV. = 16.8 DEGREES REMARK 500 ARG B 203 NE - CZ - NH2 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG D 203 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 43 -61.76 -107.73 REMARK 500 LYS A 156 40.69 -96.30 REMARK 500 LEU A 161 63.68 -118.28 REMARK 500 LEU B 108 -151.41 -116.85 REMARK 500 TRP B 189 -57.87 -120.64 REMARK 500 THR B 193 -50.29 78.89 REMARK 500 MET B 220 154.49 -48.01 REMARK 500 ALA B 226 173.47 176.94 REMARK 500 SER B 234 62.99 -159.48 REMARK 500 LYS C 156 41.95 -96.05 REMARK 500 LEU D 108 -146.66 -122.03 REMARK 500 TRP D 189 -56.59 -120.27 REMARK 500 THR D 193 -49.74 79.52 REMARK 500 MET D 220 154.46 -47.42 REMARK 500 ALA D 226 173.88 177.84 REMARK 500 SER D 234 65.31 -159.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 11 OE1 REMARK 620 2 ASP A 67 OD1 88.1 REMARK 620 3 GLU A 69 OE1 85.7 93.3 REMARK 620 4 ASP A 103 OD2 90.1 167.0 99.4 REMARK 620 5 HOH A 411 O 94.3 83.8 177.1 83.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 11 OE2 REMARK 620 2 GLU A 69 OE1 81.9 REMARK 620 3 GLU A 69 OE2 103.7 47.0 REMARK 620 4 ASP A 100 OD1 83.3 120.0 81.7 REMARK 620 5 GLN A 101 O 78.8 148.6 163.2 82.1 REMARK 620 6 ASP A 103 OD1 89.3 68.9 110.3 167.2 86.2 REMARK 620 7 ASP A 136 OD1 161.1 105.3 93.6 106.9 86.8 77.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 44 O REMARK 620 2 HOH A 433 O 75.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 102 OD1 REMARK 620 2 HIS A 104 O 95.0 REMARK 620 3 ASP A 134 OD1 155.2 90.2 REMARK 620 4 ASP A 134 OD2 152.0 93.1 51.1 REMARK 620 5 ASP A 136 OD2 74.8 80.7 130.0 80.1 REMARK 620 6 ASN A 143 O 88.6 175.9 85.7 84.8 102.4 REMARK 620 7 ASP A 195 OD2 76.9 82.7 79.8 130.8 145.6 96.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 11 OE2 REMARK 620 2 GLU C 69 OE1 83.1 REMARK 620 3 GLU C 69 OE2 106.3 47.9 REMARK 620 4 ASP C 100 OD1 83.8 118.2 79.5 REMARK 620 5 GLN C 101 O 79.4 153.3 157.8 79.9 REMARK 620 6 ASP C 103 OD1 92.6 72.6 112.6 167.9 88.1 REMARK 620 7 ASP C 136 OD1 161.9 107.4 91.5 103.2 85.3 77.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 11 OE1 REMARK 620 2 ASP C 67 OD1 83.5 REMARK 620 3 GLU C 69 OE1 81.5 89.1 REMARK 620 4 ASP C 103 OD2 88.9 168.9 97.7 REMARK 620 5 HOH C 408 O 90.7 82.6 169.2 89.5 REMARK 620 6 HOH C 433 O 167.7 97.3 86.3 91.9 101.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN C 102 OD1 REMARK 620 2 HIS C 104 O 95.5 REMARK 620 3 ASP C 134 OD1 155.0 92.7 REMARK 620 4 ASP C 134 OD2 152.0 93.4 50.1 REMARK 620 5 ASP C 136 OD2 75.5 79.9 129.3 80.1 REMARK 620 6 ASN C 143 O 89.4 175.0 83.0 82.0 100.9 REMARK 620 7 ASP C 195 OD2 78.2 87.7 78.6 128.7 149.5 93.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR C 109 O REMARK 620 2 HOH D 308 O 78.4 REMARK 620 3 HOH D 313 O 155.8 125.9 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 304 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5JYL RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 ABOUT SCFV TSP11 (CHAIN B, D), RESIDUES 123-141(SAGGGGSGGGGSGGGGSDI) REMARK 999 BELONG TO THE LINKER JOINING THE HEAVY TO THE LIGHT CHAIN OF THE REMARK 999 ANTIBODY, AND RESIDUES 250-257(SAHHHHHH) BELONG TO THE PURIFICATION REMARK 999 TAG. DBREF 5JYM A 1 213 UNP P22223 CADH3_HUMAN 108 320 DBREF 5JYM B 1 257 PDB 5JYM 5JYM 1 257 DBREF 5JYM C 1 213 UNP P22223 CADH3_HUMAN 108 320 DBREF 5JYM D 1 257 PDB 5JYM 5JYM 1 257 SEQRES 1 A 213 ASP TRP VAL VAL ALA PRO ILE SER VAL PRO GLU ASN GLY SEQRES 2 A 213 LYS GLY PRO PHE PRO GLN ARG LEU ASN GLN LEU LYS SER SEQRES 3 A 213 ASN LYS ASP ARG ASP THR LYS ILE PHE TYR SER ILE THR SEQRES 4 A 213 GLY PRO GLY ALA ASP SER PRO PRO GLU GLY VAL PHE ALA SEQRES 5 A 213 VAL GLU LYS GLU THR GLY TRP LEU LEU LEU ASN LYS PRO SEQRES 6 A 213 LEU ASP ARG GLU GLU ILE ALA LYS TYR GLU LEU PHE GLY SEQRES 7 A 213 HIS ALA VAL SER GLU ASN GLY ALA SER VAL GLU ASP PRO SEQRES 8 A 213 MET ASN ILE SER ILE ILE VAL THR ASP GLN ASN ASP HIS SEQRES 9 A 213 LYS PRO LYS PHE THR GLN ASP THR PHE ARG GLY SER VAL SEQRES 10 A 213 LEU GLU GLY VAL LEU PRO GLY THR SER VAL MET GLN VAL SEQRES 11 A 213 THR ALA THR ASP GLU ASP ASP ALA ILE TYR THR TYR ASN SEQRES 12 A 213 GLY VAL VAL ALA TYR SER ILE HIS SER GLN GLU PRO LYS SEQRES 13 A 213 ASP PRO HIS ASP LEU MET PHE THR ILE HIS ARG SER THR SEQRES 14 A 213 GLY THR ILE SER VAL ILE SER SER GLY LEU ASP ARG GLU SEQRES 15 A 213 LYS VAL PRO GLU TYR THR LEU THR ILE GLN ALA THR ASP SEQRES 16 A 213 MET ASP GLY ASP GLY SER THR THR THR ALA VAL ALA VAL SEQRES 17 A 213 VAL GLU ILE LEU ASP SEQRES 1 B 257 GLN VAL GLN LEU GLN GLN PRO GLY THR GLU LEU VAL LYS SEQRES 2 B 257 PRO GLY ALA SER VAL LYS LEU SER CYS LYS ALA SER GLY SEQRES 3 B 257 TYR THR PHE THR ARG TYR TRP ILE ASN TRP VAL LYS GLN SEQRES 4 B 257 ARG PRO GLN GLY GLY LEU GLU TRP ILE GLY ASN ILE TYR SEQRES 5 B 257 PRO GLY SER ASN ILE THR ASN TYR ASN GLU LYS PHE LYS SEQRES 6 B 257 ASN LYS ALA THR LEU THR VAL ASP THR SER SER ASN THR SEQRES 7 B 257 ALA TYR MET GLN LEU SER SER LEU THR SER ASP ASP SER SEQRES 8 B 257 ALA VAL TYR TYR CYS ALA ARG GLU GLY ILE TYR ASP GLY SEQRES 9 B 257 TYR PHE PRO LEU PHE PRO TYR TRP GLY GLN GLY THR LEU SEQRES 10 B 257 VAL THR VAL SER ALA SER ALA GLY GLY GLY GLY SER GLY SEQRES 11 B 257 GLY GLY GLY SER GLY GLY GLY GLY SER ASP ILE GLU ASN SEQRES 12 B 257 VAL LEU THR GLN SER PRO ALA ILE MET ALA ALA SER PRO SEQRES 13 B 257 GLY GLU LYS VAL THR MET THR CYS SER ALA SER SER SER SEQRES 14 B 257 VAL SER SER GLY ASN PHE HIS TRP TYR GLN GLN LYS PRO SEQRES 15 B 257 GLY THR SER PRO LYS LEU TRP ILE TYR ARG THR SER ASN SEQRES 16 B 257 LEU ALA SER GLY VAL PRO ALA ARG PHE SER GLY SER GLY SEQRES 17 B 257 SER GLY THR SER TYR SER LEU THR ILE SER SER MET GLU SEQRES 18 B 257 ALA GLU ASP ALA ALA THR TYR TYR CYS GLN GLN TRP SER SEQRES 19 B 257 GLY TYR PRO TRP THR PHE GLY GLY GLY THR LYS LEU GLU SEQRES 20 B 257 ILE LYS SER ALA HIS HIS HIS HIS HIS HIS SEQRES 1 C 213 ASP TRP VAL VAL ALA PRO ILE SER VAL PRO GLU ASN GLY SEQRES 2 C 213 LYS GLY PRO PHE PRO GLN ARG LEU ASN GLN LEU LYS SER SEQRES 3 C 213 ASN LYS ASP ARG ASP THR LYS ILE PHE TYR SER ILE THR SEQRES 4 C 213 GLY PRO GLY ALA ASP SER PRO PRO GLU GLY VAL PHE ALA SEQRES 5 C 213 VAL GLU LYS GLU THR GLY TRP LEU LEU LEU ASN LYS PRO SEQRES 6 C 213 LEU ASP ARG GLU GLU ILE ALA LYS TYR GLU LEU PHE GLY SEQRES 7 C 213 HIS ALA VAL SER GLU ASN GLY ALA SER VAL GLU ASP PRO SEQRES 8 C 213 MET ASN ILE SER ILE ILE VAL THR ASP GLN ASN ASP HIS SEQRES 9 C 213 LYS PRO LYS PHE THR GLN ASP THR PHE ARG GLY SER VAL SEQRES 10 C 213 LEU GLU GLY VAL LEU PRO GLY THR SER VAL MET GLN VAL SEQRES 11 C 213 THR ALA THR ASP GLU ASP ASP ALA ILE TYR THR TYR ASN SEQRES 12 C 213 GLY VAL VAL ALA TYR SER ILE HIS SER GLN GLU PRO LYS SEQRES 13 C 213 ASP PRO HIS ASP LEU MET PHE THR ILE HIS ARG SER THR SEQRES 14 C 213 GLY THR ILE SER VAL ILE SER SER GLY LEU ASP ARG GLU SEQRES 15 C 213 LYS VAL PRO GLU TYR THR LEU THR ILE GLN ALA THR ASP SEQRES 16 C 213 MET ASP GLY ASP GLY SER THR THR THR ALA VAL ALA VAL SEQRES 17 C 213 VAL GLU ILE LEU ASP SEQRES 1 D 257 GLN VAL GLN LEU GLN GLN PRO GLY THR GLU LEU VAL LYS SEQRES 2 D 257 PRO GLY ALA SER VAL LYS LEU SER CYS LYS ALA SER GLY SEQRES 3 D 257 TYR THR PHE THR ARG TYR TRP ILE ASN TRP VAL LYS GLN SEQRES 4 D 257 ARG PRO GLN GLY GLY LEU GLU TRP ILE GLY ASN ILE TYR SEQRES 5 D 257 PRO GLY SER ASN ILE THR ASN TYR ASN GLU LYS PHE LYS SEQRES 6 D 257 ASN LYS ALA THR LEU THR VAL ASP THR SER SER ASN THR SEQRES 7 D 257 ALA TYR MET GLN LEU SER SER LEU THR SER ASP ASP SER SEQRES 8 D 257 ALA VAL TYR TYR CYS ALA ARG GLU GLY ILE TYR ASP GLY SEQRES 9 D 257 TYR PHE PRO LEU PHE PRO TYR TRP GLY GLN GLY THR LEU SEQRES 10 D 257 VAL THR VAL SER ALA SER ALA GLY GLY GLY GLY SER GLY SEQRES 11 D 257 GLY GLY GLY SER GLY GLY GLY GLY SER ASP ILE GLU ASN SEQRES 12 D 257 VAL LEU THR GLN SER PRO ALA ILE MET ALA ALA SER PRO SEQRES 13 D 257 GLY GLU LYS VAL THR MET THR CYS SER ALA SER SER SER SEQRES 14 D 257 VAL SER SER GLY ASN PHE HIS TRP TYR GLN GLN LYS PRO SEQRES 15 D 257 GLY THR SER PRO LYS LEU TRP ILE TYR ARG THR SER ASN SEQRES 16 D 257 LEU ALA SER GLY VAL PRO ALA ARG PHE SER GLY SER GLY SEQRES 17 D 257 SER GLY THR SER TYR SER LEU THR ILE SER SER MET GLU SEQRES 18 D 257 ALA GLU ASP ALA ALA THR TYR TYR CYS GLN GLN TRP SER SEQRES 19 D 257 GLY TYR PRO TRP THR PHE GLY GLY GLY THR LYS LEU GLU SEQRES 20 D 257 ILE LYS SER ALA HIS HIS HIS HIS HIS HIS HET CA A 301 1 HET CA A 302 1 HET CA A 303 1 HET CA A 304 1 HET CA C 301 1 HET CA C 302 1 HET CA C 303 1 HET CA C 304 1 HETNAM CA CALCIUM ION FORMUL 5 CA 8(CA 2+) FORMUL 13 HOH *119(H2 O) HELIX 1 AA1 SER A 26 ARG A 30 5 5 HELIX 2 AA2 MET A 196 ASP A 199 5 4 HELIX 3 AA3 THR B 28 TYR B 32 5 5 HELIX 4 AA4 GLU B 62 LYS B 65 5 4 HELIX 5 AA5 THR B 74 SER B 76 5 3 HELIX 6 AA6 THR B 87 SER B 91 5 5 HELIX 7 AA7 SER B 171 GLY B 173 5 3 HELIX 8 AA8 GLU B 221 ALA B 225 5 5 HELIX 9 AA9 SER C 26 ARG C 30 5 5 HELIX 10 AB1 MET C 196 ASP C 199 5 4 HELIX 11 AB2 THR D 28 TYR D 32 5 5 HELIX 12 AB3 GLU D 62 LYS D 65 5 4 HELIX 13 AB4 THR D 74 SER D 76 5 3 HELIX 14 AB5 THR D 87 SER D 91 5 5 HELIX 15 AB6 SER D 171 GLY D 173 5 3 HELIX 16 AB7 GLU D 221 ALA D 225 5 5 SHEET 1 AA1 4 ILE A 7 PRO A 10 0 SHEET 2 AA1 4 MET A 92 THR A 99 1 O ILE A 97 N VAL A 9 SHEET 3 AA1 4 LYS A 73 SER A 82 -1 N LEU A 76 O ILE A 94 SHEET 4 AA1 4 ILE A 34 THR A 39 -1 N SER A 37 O HIS A 79 SHEET 1 AA2 3 GLN A 19 GLN A 23 0 SHEET 2 AA2 3 TRP A 59 LEU A 62 -1 O LEU A 60 N ASN A 22 SHEET 3 AA2 3 PHE A 51 VAL A 53 -1 N ALA A 52 O LEU A 61 SHEET 1 AA3 2 LYS A 107 PHE A 108 0 SHEET 2 AA3 2 ALA A 132 THR A 133 -1 O THR A 133 N LYS A 107 SHEET 1 AA4 4 THR A 112 LEU A 118 0 SHEET 2 AA4 4 THR A 202 LEU A 212 1 O VAL A 206 N PHE A 113 SHEET 3 AA4 4 GLU A 186 THR A 194 -1 N ILE A 191 O ALA A 205 SHEET 4 AA4 4 ALA A 147 GLU A 154 -1 N GLU A 154 O THR A 188 SHEET 1 AA5 3 SER A 126 GLN A 129 0 SHEET 2 AA5 3 THR A 171 VAL A 174 -1 O ILE A 172 N MET A 128 SHEET 3 AA5 3 PHE A 163 ILE A 165 -1 N THR A 164 O SER A 173 SHEET 1 AA6 4 GLN B 3 GLN B 5 0 SHEET 2 AA6 4 VAL B 18 SER B 25 -1 O LYS B 23 N GLN B 5 SHEET 3 AA6 4 THR B 78 LEU B 83 -1 O MET B 81 N LEU B 20 SHEET 4 AA6 4 ALA B 68 ASP B 73 -1 N ASP B 73 O THR B 78 SHEET 1 AA7 6 THR B 9 LEU B 11 0 SHEET 2 AA7 6 THR B 116 THR B 119 1 O LEU B 117 N GLU B 10 SHEET 3 AA7 6 ALA B 92 ARG B 98 -1 N ALA B 92 O VAL B 118 SHEET 4 AA7 6 ILE B 34 GLN B 39 -1 N GLN B 39 O VAL B 93 SHEET 5 AA7 6 LEU B 45 TYR B 52 -1 O GLY B 49 N TRP B 36 SHEET 6 AA7 6 ILE B 57 TYR B 60 -1 O ILE B 57 N TYR B 52 SHEET 1 AA8 4 THR B 9 LEU B 11 0 SHEET 2 AA8 4 THR B 116 THR B 119 1 O LEU B 117 N GLU B 10 SHEET 3 AA8 4 ALA B 92 ARG B 98 -1 N ALA B 92 O VAL B 118 SHEET 4 AA8 4 TYR B 111 TRP B 112 -1 O TYR B 111 N ARG B 98 SHEET 1 AA9 4 LEU B 145 SER B 148 0 SHEET 2 AA9 4 VAL B 160 ALA B 166 -1 O SER B 165 N THR B 146 SHEET 3 AA9 4 SER B 212 ILE B 217 -1 O ILE B 217 N VAL B 160 SHEET 4 AA9 4 PHE B 204 SER B 209 -1 N SER B 205 O THR B 216 SHEET 1 AB1 6 ILE B 151 ALA B 153 0 SHEET 2 AB1 6 THR B 244 GLU B 247 1 O LYS B 245 N MET B 152 SHEET 3 AB1 6 THR B 227 GLN B 232 -1 N TYR B 228 O THR B 244 SHEET 4 AB1 6 PHE B 175 GLN B 180 -1 N GLN B 180 O THR B 227 SHEET 5 AB1 6 LYS B 187 TYR B 191 -1 O ILE B 190 N TRP B 177 SHEET 6 AB1 6 ASN B 195 LEU B 196 -1 O ASN B 195 N TYR B 191 SHEET 1 AB2 4 ILE B 151 ALA B 153 0 SHEET 2 AB2 4 THR B 244 GLU B 247 1 O LYS B 245 N MET B 152 SHEET 3 AB2 4 THR B 227 GLN B 232 -1 N TYR B 228 O THR B 244 SHEET 4 AB2 4 THR B 239 PHE B 240 -1 O THR B 239 N GLN B 232 SHEET 1 AB3 4 ILE C 7 PRO C 10 0 SHEET 2 AB3 4 MET C 92 THR C 99 1 O SER C 95 N ILE C 7 SHEET 3 AB3 4 LYS C 73 VAL C 81 -1 N LEU C 76 O ILE C 94 SHEET 4 AB3 4 PHE C 35 THR C 39 -1 N PHE C 35 O VAL C 81 SHEET 1 AB4 3 GLN C 19 GLN C 23 0 SHEET 2 AB4 3 TRP C 59 LEU C 62 -1 O LEU C 60 N ASN C 22 SHEET 3 AB4 3 PHE C 51 VAL C 53 -1 N ALA C 52 O LEU C 61 SHEET 1 AB5 2 LYS C 107 PHE C 108 0 SHEET 2 AB5 2 ALA C 132 THR C 133 -1 O THR C 133 N LYS C 107 SHEET 1 AB6 4 THR C 112 LEU C 118 0 SHEET 2 AB6 4 THR C 202 LEU C 212 1 O VAL C 208 N PHE C 113 SHEET 3 AB6 4 GLU C 186 THR C 194 -1 N ILE C 191 O ALA C 205 SHEET 4 AB6 4 ALA C 147 GLU C 154 -1 N GLU C 154 O THR C 188 SHEET 1 AB7 3 SER C 126 GLN C 129 0 SHEET 2 AB7 3 THR C 171 VAL C 174 -1 O ILE C 172 N MET C 128 SHEET 3 AB7 3 PHE C 163 ILE C 165 -1 N THR C 164 O SER C 173 SHEET 1 AB8 4 GLN D 3 GLN D 5 0 SHEET 2 AB8 4 VAL D 18 SER D 25 -1 O LYS D 23 N GLN D 5 SHEET 3 AB8 4 THR D 78 LEU D 83 -1 O MET D 81 N LEU D 20 SHEET 4 AB8 4 ALA D 68 ASP D 73 -1 N ASP D 73 O THR D 78 SHEET 1 AB9 5 ILE D 57 TYR D 60 0 SHEET 2 AB9 5 LEU D 45 TYR D 52 -1 N TYR D 52 O ILE D 57 SHEET 3 AB9 5 ILE D 34 GLN D 39 -1 N LYS D 38 O GLU D 46 SHEET 4 AB9 5 ALA D 92 ARG D 98 -1 O VAL D 93 N GLN D 39 SHEET 5 AB9 5 TYR D 111 TRP D 112 -1 O TYR D 111 N ARG D 98 SHEET 1 AC1 5 ILE D 57 TYR D 60 0 SHEET 2 AC1 5 LEU D 45 TYR D 52 -1 N TYR D 52 O ILE D 57 SHEET 3 AC1 5 ILE D 34 GLN D 39 -1 N LYS D 38 O GLU D 46 SHEET 4 AC1 5 ALA D 92 ARG D 98 -1 O VAL D 93 N GLN D 39 SHEET 5 AC1 5 THR D 116 VAL D 118 -1 O VAL D 118 N ALA D 92 SHEET 1 AC2 4 LEU D 145 SER D 148 0 SHEET 2 AC2 4 VAL D 160 ALA D 166 -1 O SER D 165 N THR D 146 SHEET 3 AC2 4 SER D 212 ILE D 217 -1 O ILE D 217 N VAL D 160 SHEET 4 AC2 4 PHE D 204 SER D 209 -1 N SER D 205 O THR D 216 SHEET 1 AC3 6 ILE D 151 ALA D 153 0 SHEET 2 AC3 6 THR D 244 GLU D 247 1 O LYS D 245 N MET D 152 SHEET 3 AC3 6 THR D 227 GLN D 232 -1 N TYR D 228 O THR D 244 SHEET 4 AC3 6 PHE D 175 GLN D 180 -1 N GLN D 180 O THR D 227 SHEET 5 AC3 6 LYS D 187 TYR D 191 -1 O ILE D 190 N TRP D 177 SHEET 6 AC3 6 ASN D 195 LEU D 196 -1 O ASN D 195 N TYR D 191 SHEET 1 AC4 4 ILE D 151 ALA D 153 0 SHEET 2 AC4 4 THR D 244 GLU D 247 1 O LYS D 245 N MET D 152 SHEET 3 AC4 4 THR D 227 GLN D 232 -1 N TYR D 228 O THR D 244 SHEET 4 AC4 4 THR D 239 PHE D 240 -1 O THR D 239 N GLN D 232 SSBOND 1 CYS B 22 CYS B 96 1555 1555 2.05 SSBOND 2 CYS B 164 CYS B 230 1555 1555 2.08 SSBOND 3 CYS D 22 CYS D 96 1555 1555 2.06 SSBOND 4 CYS D 164 CYS D 230 1555 1555 2.06 LINK OE1 GLU A 11 CA CA A 301 1555 1555 2.32 LINK OE2 GLU A 11 CA CA A 302 1555 1555 2.43 LINK O ASP A 44 CA CA A 304 1555 1555 2.52 LINK OD1 ASP A 67 CA CA A 301 1555 1555 2.28 LINK OE1 GLU A 69 CA CA A 301 1555 1555 2.24 LINK OE1 GLU A 69 CA CA A 302 1555 1555 2.99 LINK OE2 GLU A 69 CA CA A 302 1555 1555 2.23 LINK OD1 ASP A 100 CA CA A 302 1555 1555 2.11 LINK O GLN A 101 CA CA A 302 1555 1555 2.25 LINK OD1 ASN A 102 CA CA A 303 1555 1555 2.26 LINK OD2 ASP A 103 CA CA A 301 1555 1555 2.16 LINK OD1 ASP A 103 CA CA A 302 1555 1555 2.31 LINK O HIS A 104 CA CA A 303 1555 1555 2.32 LINK OD1 ASP A 134 CA CA A 303 1555 1555 2.39 LINK OD2 ASP A 134 CA CA A 303 1555 1555 2.62 LINK OD1 ASP A 136 CA CA A 302 1555 1555 2.36 LINK OD2 ASP A 136 CA CA A 303 1555 1555 2.27 LINK O ASN A 143 CA CA A 303 1555 1555 2.29 LINK OD2 ASP A 195 CA CA A 303 1555 1555 2.49 LINK CA CA A 301 O HOH A 411 1555 1555 2.41 LINK CA CA A 304 O HOH A 433 1555 1555 2.70 LINK OE2 GLU C 11 CA CA C 301 1555 1555 2.39 LINK OE1 GLU C 11 CA CA C 303 1555 1555 2.42 LINK OD1 ASP C 67 CA CA C 303 1555 1555 2.44 LINK OE1 GLU C 69 CA CA C 301 1555 1555 2.95 LINK OE2 GLU C 69 CA CA C 301 1555 1555 2.25 LINK OE1 GLU C 69 CA CA C 303 1555 1555 2.28 LINK OD1 ASP C 100 CA CA C 301 1555 1555 2.12 LINK O GLN C 101 CA CA C 301 1555 1555 2.28 LINK OD1 ASN C 102 CA CA C 302 1555 1555 2.21 LINK OD1 ASP C 103 CA CA C 301 1555 1555 2.22 LINK OD2 ASP C 103 CA CA C 303 1555 1555 2.17 LINK O HIS C 104 CA CA C 302 1555 1555 2.25 LINK O THR C 109 CA CA C 304 1555 1555 2.48 LINK OD1 ASP C 134 CA CA C 302 1555 1555 2.45 LINK OD2 ASP C 134 CA CA C 302 1555 1555 2.65 LINK OD1 ASP C 136 CA CA C 301 1555 1555 2.48 LINK OD2 ASP C 136 CA CA C 302 1555 1555 2.29 LINK O ASN C 143 CA CA C 302 1555 1555 2.38 LINK OD2 ASP C 195 CA CA C 302 1555 1555 2.45 LINK CA CA C 303 O HOH C 408 1555 1555 2.26 LINK CA CA C 303 O HOH C 433 1555 1555 2.41 LINK CA CA C 304 O HOH D 308 1555 3454 2.66 LINK CA CA C 304 O HOH D 313 1555 3454 2.65 CISPEP 1 GLY A 15 PRO A 16 0 9.31 CISPEP 2 PHE A 17 PRO A 18 0 -0.13 CISPEP 3 PRO A 46 PRO A 47 0 -2.82 CISPEP 4 GLU A 154 PRO A 155 0 -8.43 CISPEP 5 ASP A 157 PRO A 158 0 1.95 CISPEP 6 GLU B 99 GLY B 100 0 1.05 CISPEP 7 SER B 148 PRO B 149 0 -3.69 CISPEP 8 TYR B 236 PRO B 237 0 -2.49 CISPEP 9 GLY C 15 PRO C 16 0 9.44 CISPEP 10 PHE C 17 PRO C 18 0 6.42 CISPEP 11 PRO C 46 PRO C 47 0 -4.45 CISPEP 12 GLU C 154 PRO C 155 0 -10.89 CISPEP 13 ASP C 157 PRO C 158 0 2.56 CISPEP 14 SER C 177 GLY C 178 0 -6.14 CISPEP 15 GLU D 99 GLY D 100 0 3.78 CISPEP 16 SER D 148 PRO D 149 0 -3.02 CISPEP 17 TYR D 236 PRO D 237 0 -5.00 SITE 1 AC1 5 GLU A 11 ASP A 67 GLU A 69 ASP A 103 SITE 2 AC1 5 HOH A 411 SITE 1 AC2 6 GLU A 11 GLU A 69 ASP A 100 GLN A 101 SITE 2 AC2 6 ASP A 103 ASP A 136 SITE 1 AC3 6 ASN A 102 HIS A 104 ASP A 134 ASP A 136 SITE 2 AC3 6 ASN A 143 ASP A 195 SITE 1 AC4 2 ASP A 44 HOH A 433 SITE 1 AC5 6 GLU C 11 GLU C 69 ASP C 100 GLN C 101 SITE 2 AC5 6 ASP C 103 ASP C 136 SITE 1 AC6 6 ASN C 102 HIS C 104 ASP C 134 ASP C 136 SITE 2 AC6 6 ASN C 143 ASP C 195 SITE 1 AC7 6 GLU C 11 ASP C 67 GLU C 69 ASP C 103 SITE 2 AC7 6 HOH C 408 HOH C 433 SITE 1 AC8 3 THR C 109 HOH D 308 HOH D 313 CRYST1 58.700 83.430 199.820 90.00 90.00 90.00 P 2 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017036 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011986 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005005 0.00000