HEADER FLUORESCENT PROTEIN 17-MAY-16 5JZL TITLE THE STRUCTURE OF MONOMERIC ULTRA STABLE GREEN FLUORESCENT PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: GREEN FLUORESCENT PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 3-238; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEQUOREA VICTORIA; SOURCE 3 ORGANISM_COMMON: JELLYFISH; SOURCE 4 ORGANISM_TAXID: 6100; SOURCE 5 GENE: GFP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS GREEN FLUORESCENT PROTEIN, GFP, THERMOSTABLE, MONOMERIC, FLUORESCENT KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.J.GUNN,K.J.YONG,D.J.SCOTT,M.D.W.GRIFFIN REVDAT 5 15-NOV-23 5JZL 1 REMARK REVDAT 4 27-SEP-23 5JZL 1 LINK REVDAT 3 19-DEC-18 5JZL 1 JRNL REVDAT 2 07-MAR-18 5JZL 1 JRNL REVDAT 1 06-DEC-17 5JZL 0 JRNL AUTH D.J.SCOTT,N.J.GUNN,K.J.YONG,V.C.WIMMER,N.A.VELDHUIS, JRNL AUTH 2 L.M.CHALLIS,M.HAIDAR,S.PETROU,R.A.D.BATHGATE,M.D.W.GRIFFIN JRNL TITL A NOVEL ULTRA-STABLE, MONOMERIC GREEN FLUORESCENT PROTEIN JRNL TITL 2 FOR DIRECT VOLUMETRIC IMAGING OF WHOLE ORGANS USING CLARITY. JRNL REF SCI REP V. 8 667 2018 JRNL REFN ESSN 2045-2322 JRNL PMID 29330459 JRNL DOI 10.1038/S41598-017-18045-Y REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.82 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 45306 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2450 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3236 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.26 REMARK 3 BIN R VALUE (WORKING SET) : 0.2600 REMARK 3 BIN FREE R VALUE SET COUNT : 187 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3673 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 596 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.29000 REMARK 3 B22 (A**2) : -0.05000 REMARK 3 B33 (A**2) : -0.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.19000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.125 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.123 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.085 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.284 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3781 ; 0.015 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3556 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5113 ; 1.727 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8208 ; 0.814 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 463 ; 6.976 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 178 ;32.788 ;24.831 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 650 ;13.260 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;15.402 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 558 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4269 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 853 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1855 ; 0.963 ; 0.964 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1854 ; 0.961 ; 0.963 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2317 ; 1.573 ; 1.437 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2318 ; 1.573 ; 1.438 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1926 ; 1.783 ; 1.188 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1927 ; 1.783 ; 1.189 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2797 ; 2.852 ; 1.695 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4708 ; 7.696 ;10.561 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4416 ; 7.446 ; 9.367 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 234 REMARK 3 ORIGIN FOR THE GROUP (A): -4.5013 -16.1925 81.4947 REMARK 3 T TENSOR REMARK 3 T11: 0.0126 T22: 0.0023 REMARK 3 T33: 0.0138 T12: 0.0013 REMARK 3 T13: 0.0117 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.8080 L22: 0.8631 REMARK 3 L33: 0.6688 L12: 0.2342 REMARK 3 L13: 0.2047 L23: 0.0943 REMARK 3 S TENSOR REMARK 3 S11: 0.0177 S12: 0.0004 S13: 0.0597 REMARK 3 S21: 0.0637 S22: -0.0146 S23: 0.0512 REMARK 3 S31: -0.0214 S32: 0.0147 S33: -0.0031 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 233 REMARK 3 ORIGIN FOR THE GROUP (A): -15.9785 -5.3240 49.9524 REMARK 3 T TENSOR REMARK 3 T11: 0.0170 T22: 0.0124 REMARK 3 T33: 0.0261 T12: 0.0058 REMARK 3 T13: 0.0142 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 0.3961 L22: 1.0677 REMARK 3 L33: 1.2782 L12: -0.1796 REMARK 3 L13: -0.0001 L23: -0.5614 REMARK 3 S TENSOR REMARK 3 S11: -0.0183 S12: -0.0267 S13: -0.0283 REMARK 3 S21: -0.1034 S22: -0.0550 S23: -0.1055 REMARK 3 S31: 0.1141 S32: 0.0207 S33: 0.0734 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5JZL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000220239. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47783 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 49.490 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.13600 REMARK 200 R SYM (I) : 0.15800 REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.86900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5JZK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% W/V PEG 8000, 0.2 M SODIUM REMARK 280 CHLORIDE, 0.1 M PHOSPHATE-CITRATE BUFFER PH 3.7, 4% V/V ACETONE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 281K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.85300 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -10 REMARK 465 ARG A -9 REMARK 465 GLY A -8 REMARK 465 SER A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 GLY A 0 REMARK 465 GLU A 235 REMARK 465 LEU A 236 REMARK 465 TYR A 237 REMARK 465 LYS A 238 REMARK 465 MET B -10 REMARK 465 ARG B -9 REMARK 465 GLY B -8 REMARK 465 SER B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 GLY B 0 REMARK 465 ASP B 234 REMARK 465 GLU B 235 REMARK 465 LEU B 236 REMARK 465 TYR B 237 REMARK 465 LYS B 238 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 132 CG CD OE1 OE2 REMARK 470 ASP A 234 CG OD1 OD2 REMARK 470 GLU B 132 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 504 O HOH B 558 2.00 REMARK 500 NH1 ARG A 168 O HOH A 401 2.05 REMARK 500 O HOH A 408 O HOH A 615 2.06 REMARK 500 OE1 GLU A 17 NH1 ARG A 122 2.07 REMARK 500 OE2 GLU B 115 NH1 ARG B 122 2.10 REMARK 500 O HOH B 593 O HOH B 604 2.11 REMARK 500 O HOH A 531 O HOH A 623 2.12 REMARK 500 O HOH A 433 O HOH A 646 2.14 REMARK 500 O HOH A 440 O HOH A 565 2.15 REMARK 500 O ASN B 146 O HOH B 401 2.16 REMARK 500 OE1 GLN A 204 O HOH A 402 2.16 REMARK 500 OH TYR A 164 O HOH A 403 2.18 REMARK 500 NH1 ARG B 168 O HOH B 402 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 75 156.84 -48.47 REMARK 500 PRO A 75 156.86 -48.47 REMARK 500 ASP A 103 -154.57 -153.35 REMARK 500 PHE A 145 118.36 -161.11 REMARK 500 ASP B 103 -149.47 -158.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 684 DISTANCE = 5.98 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 450 O REMARK 620 2 HOH A 576 O 85.2 REMARK 620 3 HOH B 447 O 85.2 159.0 REMARK 620 4 HOH B 533 O 174.6 99.8 89.4 REMARK 620 5 HOH B 609 O 66.8 82.4 76.7 111.8 REMARK 620 6 HOH B 623 O 81.4 101.1 95.8 99.4 147.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE B 145 O REMARK 620 2 SER B 205 O 104.4 REMARK 620 3 HOH B 401 O 88.2 92.2 REMARK 620 4 HOH B 566 O 81.7 82.3 166.9 REMARK 620 5 HOH B 608 O 81.4 173.8 89.9 96.8 REMARK 620 6 HOH B 621 O 171.2 82.2 97.4 93.6 91.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5JZK RELATED DB: PDB DBREF1 5JZL A 3 238 UNP A0A059PIQ0_AEQVI DBREF2 5JZL A A0A059PIQ0 3 238 DBREF1 5JZL B 3 238 UNP A0A059PIQ0_AEQVI DBREF2 5JZL B A0A059PIQ0 3 238 SEQADV 5JZL MET A -10 UNP A0A059PIQ INITIATING METHIONINE SEQADV 5JZL ARG A -9 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL GLY A -8 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL SER A -7 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL HIS A -6 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL HIS A -5 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL HIS A -4 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL HIS A -3 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL HIS A -2 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL HIS A -1 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL GLY A 0 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL SER A 1 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL SER A 2 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL ARG A 30 UNP A0A059PIQ SER 30 CONFLICT SEQADV 5JZL CRO A UNP A0A059PIQ THR 65 CHROMOPHORE SEQADV 5JZL CRO A UNP A0A059PIQ TYR 66 CHROMOPHORE SEQADV 5JZL CRO A 66 UNP A0A059PIQ GLY 67 CHROMOPHORE SEQADV 5JZL LEU A 69 UNP A0A059PIQ GLN 69 CONFLICT SEQADV 5JZL SER A 72 UNP A0A059PIQ ALA 72 CONFLICT SEQADV 5JZL ARG A 80 UNP A0A059PIQ GLN 80 CONFLICT SEQADV 5JZL TYR A 164 UNP A0A059PIQ ASN 164 CONFLICT SEQADV 5JZL VAL A 206 UNP A0A059PIQ ALA 206 CONFLICT SEQADV 5JZL ASP A 223 UNP A0A059PIQ PHE 223 CONFLICT SEQADV 5JZL MET B -10 UNP A0A059PIQ INITIATING METHIONINE SEQADV 5JZL ARG B -9 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL GLY B -8 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL SER B -7 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL HIS B -6 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL HIS B -5 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL HIS B -4 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL HIS B -3 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL HIS B -2 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL HIS B -1 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL GLY B 0 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL SER B 1 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL SER B 2 UNP A0A059PIQ EXPRESSION TAG SEQADV 5JZL ARG B 30 UNP A0A059PIQ SER 30 CONFLICT SEQADV 5JZL CRO B UNP A0A059PIQ THR 65 CHROMOPHORE SEQADV 5JZL CRO B UNP A0A059PIQ TYR 66 CHROMOPHORE SEQADV 5JZL CRO B 66 UNP A0A059PIQ GLY 67 CHROMOPHORE SEQADV 5JZL LEU B 69 UNP A0A059PIQ GLN 69 CONFLICT SEQADV 5JZL SER B 72 UNP A0A059PIQ ALA 72 CONFLICT SEQADV 5JZL ARG B 80 UNP A0A059PIQ GLN 80 CONFLICT SEQADV 5JZL TYR B 164 UNP A0A059PIQ ASN 164 CONFLICT SEQADV 5JZL VAL B 206 UNP A0A059PIQ ALA 206 CONFLICT SEQADV 5JZL ASP B 223 UNP A0A059PIQ PHE 223 CONFLICT SEQRES 1 A 247 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER SER SEQRES 2 A 247 LYS GLY GLU GLU LEU PHE THR GLY VAL VAL PRO ILE LEU SEQRES 3 A 247 VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS PHE SER SEQRES 4 A 247 VAL ARG GLY GLU GLY GLU GLY ASP ALA THR ASN GLY LYS SEQRES 5 A 247 LEU THR LEU LYS PHE ILE CYS THR THR GLY LYS LEU PRO SEQRES 6 A 247 VAL PRO TRP PRO THR LEU VAL THR THR LEU CRO VAL LEU SEQRES 7 A 247 CYS PHE SER ARG TYR PRO ASP HIS MET LYS ARG HIS ASP SEQRES 8 A 247 PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL GLN GLU SEQRES 9 A 247 ARG THR ILE SER PHE LYS ASP ASP GLY THR TYR LYS THR SEQRES 10 A 247 ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU VAL ASN SEQRES 11 A 247 ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS GLU ASP GLY SEQRES 12 A 247 ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN PHE ASN SER SEQRES 13 A 247 HIS ASN VAL TYR ILE THR ALA ASP LYS GLN LYS ASN GLY SEQRES 14 A 247 ILE LYS ALA TYR PHE LYS ILE ARG HIS ASN VAL GLU ASP SEQRES 15 A 247 GLY SER VAL GLN LEU ALA ASP HIS TYR GLN GLN ASN THR SEQRES 16 A 247 PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP ASN HIS SEQRES 17 A 247 TYR LEU SER THR GLN SER VAL LEU SER LYS ASP PRO ASN SEQRES 18 A 247 GLU LYS ARG ASP HIS MET VAL LEU LEU GLU ASP VAL THR SEQRES 19 A 247 ALA ALA GLY ILE THR HIS GLY MET ASP GLU LEU TYR LYS SEQRES 1 B 247 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER SER SEQRES 2 B 247 LYS GLY GLU GLU LEU PHE THR GLY VAL VAL PRO ILE LEU SEQRES 3 B 247 VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS PHE SER SEQRES 4 B 247 VAL ARG GLY GLU GLY GLU GLY ASP ALA THR ASN GLY LYS SEQRES 5 B 247 LEU THR LEU LYS PHE ILE CYS THR THR GLY LYS LEU PRO SEQRES 6 B 247 VAL PRO TRP PRO THR LEU VAL THR THR LEU CRO VAL LEU SEQRES 7 B 247 CYS PHE SER ARG TYR PRO ASP HIS MET LYS ARG HIS ASP SEQRES 8 B 247 PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL GLN GLU SEQRES 9 B 247 ARG THR ILE SER PHE LYS ASP ASP GLY THR TYR LYS THR SEQRES 10 B 247 ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU VAL ASN SEQRES 11 B 247 ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS GLU ASP GLY SEQRES 12 B 247 ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN PHE ASN SER SEQRES 13 B 247 HIS ASN VAL TYR ILE THR ALA ASP LYS GLN LYS ASN GLY SEQRES 14 B 247 ILE LYS ALA TYR PHE LYS ILE ARG HIS ASN VAL GLU ASP SEQRES 15 B 247 GLY SER VAL GLN LEU ALA ASP HIS TYR GLN GLN ASN THR SEQRES 16 B 247 PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP ASN HIS SEQRES 17 B 247 TYR LEU SER THR GLN SER VAL LEU SER LYS ASP PRO ASN SEQRES 18 B 247 GLU LYS ARG ASP HIS MET VAL LEU LEU GLU ASP VAL THR SEQRES 19 B 247 ALA ALA GLY ILE THR HIS GLY MET ASP GLU LEU TYR LYS MODRES 5JZL CRO A 66 GLY CHROMOPHORE MODRES 5JZL CRO B 66 GLY CHROMOPHORE HET CRO A 66 22 HET CRO B 66 22 HET CL A 301 1 HET CL B 301 1 HET NA B 302 1 HET NA B 303 1 HETNAM CRO {2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4- HETNAM 2 CRO HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 CRO YL}ACETIC ACID HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETSYN CRO PEPTIDE DERIVED CHROMOPHORE FORMUL 1 CRO 2(C15 H17 N3 O5) FORMUL 3 CL 2(CL 1-) FORMUL 5 NA 2(NA 1+) FORMUL 7 HOH *596(H2 O) HELIX 1 AA1 LYS A 3 THR A 9 5 7 HELIX 2 AA2 PRO A 56 VAL A 61 5 6 HELIX 3 AA3 VAL A 68 SER A 72 5 5 HELIX 4 AA4 PRO A 75 HIS A 81 5 7 HELIX 5 AA5 ASP A 82 ALA A 87 1 6 HELIX 6 AA6 LYS B 3 THR B 9 5 7 HELIX 7 AA7 PRO B 56 VAL B 61 5 6 HELIX 8 AA8 VAL B 68 SER B 72 5 5 HELIX 9 AA9 PRO B 75 HIS B 81 5 7 HELIX 10 AB1 ASP B 82 ALA B 87 1 6 HELIX 11 AB2 LYS B 156 ASN B 159 5 4 SHEET 1 AA112 VAL A 11 VAL A 22 0 SHEET 2 AA112 HIS A 25 ASP A 36 -1 O PHE A 27 N GLY A 20 SHEET 3 AA112 LYS A 41 CYS A 48 -1 O LYS A 41 N ASP A 36 SHEET 4 AA112 HIS A 217 ALA A 227 -1 O MET A 218 N PHE A 46 SHEET 5 AA112 HIS A 199 SER A 208 -1 N SER A 202 O THR A 225 SHEET 6 AA112 HIS A 148 ASP A 155 -1 N ILE A 152 O HIS A 199 SHEET 7 AA112 GLY A 160 ASN A 170 -1 O GLY A 160 N ASP A 155 SHEET 8 AA112 VAL A 176 PRO A 187 -1 O HIS A 181 N PHE A 165 SHEET 9 AA112 TYR A 92 PHE A 100 -1 N VAL A 93 O THR A 186 SHEET 10 AA112 THR A 105 GLU A 115 -1 O TYR A 106 N ILE A 98 SHEET 11 AA112 THR A 118 ILE A 128 -1 O THR A 118 N GLU A 115 SHEET 12 AA112 VAL A 11 VAL A 22 1 N GLU A 17 O ILE A 123 SHEET 1 AA212 VAL B 12 VAL B 22 0 SHEET 2 AA212 HIS B 25 ASP B 36 -1 O PHE B 27 N GLY B 20 SHEET 3 AA212 LYS B 41 CYS B 48 -1 O LYS B 41 N ASP B 36 SHEET 4 AA212 HIS B 217 ALA B 227 -1 O MET B 218 N PHE B 46 SHEET 5 AA212 HIS B 199 SER B 208 -1 N SER B 202 O THR B 225 SHEET 6 AA212 HIS B 148 ASP B 155 -1 N ILE B 152 O HIS B 199 SHEET 7 AA212 GLY B 160 ASN B 170 -1 O GLY B 160 N ASP B 155 SHEET 8 AA212 VAL B 176 PRO B 187 -1 O HIS B 181 N PHE B 165 SHEET 9 AA212 TYR B 92 PHE B 100 -1 N VAL B 93 O THR B 186 SHEET 10 AA212 THR B 105 GLU B 115 -1 O TYR B 106 N ILE B 98 SHEET 11 AA212 THR B 118 ILE B 128 -1 O LYS B 126 N LYS B 107 SHEET 12 AA212 VAL B 12 VAL B 22 1 N GLU B 17 O ILE B 123 LINK C LEU A 64 N1 CRO A 66 1555 1555 1.44 LINK C3 CRO A 66 N VAL A 68 1555 1555 1.39 LINK C LEU B 64 N1 CRO B 66 1555 1555 1.38 LINK C3 CRO B 66 N VAL B 68 1555 1555 1.49 LINK O HOH A 450 NA NA B 303 1555 1555 2.94 LINK O HOH A 576 NA NA B 303 1555 1555 2.41 LINK O PHE B 145 NA NA B 302 1555 1555 2.34 LINK O SER B 205 NA NA B 302 1555 1555 2.48 LINK NA NA B 302 O HOH B 401 1555 1555 2.73 LINK NA NA B 302 O HOH B 566 1555 1555 2.14 LINK NA NA B 302 O HOH B 608 1555 1555 2.59 LINK NA NA B 302 O HOH B 621 1555 1555 2.63 LINK NA NA B 303 O HOH B 447 1555 1555 2.51 LINK NA NA B 303 O HOH B 533 1555 1555 2.73 LINK NA NA B 303 O HOH B 609 1555 1555 3.00 LINK NA NA B 303 O HOH B 623 1555 1555 2.53 CISPEP 1 MET A 88 PRO A 89 0 10.61 CISPEP 2 MET B 88 PRO B 89 0 9.03 SITE 1 AC1 3 TRP A 57 HOH A 569 HOH A 571 SITE 1 AC2 3 TRP B 57 HOH B 484 HOH B 578 SITE 1 AC3 6 PHE B 145 SER B 205 HOH B 401 HOH B 566 SITE 2 AC3 6 HOH B 608 HOH B 621 SITE 1 AC4 6 HOH A 450 HOH A 576 HOH B 447 HOH B 533 SITE 2 AC4 6 HOH B 609 HOH B 623 CRYST1 47.352 95.706 59.649 90.00 104.21 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021118 0.000000 0.005349 0.00000 SCALE2 0.000000 0.010449 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017294 0.00000