HEADER OXIDOREDUCTASE 18-MAY-16 5K1M TITLE CRYSTAL STRUCTURE OF OXIDIZED SHEWANELLA YELLOW ENZYME 4 (SYE4) IN TITLE 2 COMPLEX WITH P-METHOXYPHENOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: NAD(P)H:FLAVIN OXIDOREDUCTASE SYE4; COMPND 3 CHAIN: A; COMPND 4 EC: 1.5.1.30; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA ONEIDENSIS (STRAIN MR-1); SOURCE 3 ORGANISM_TAXID: 211586; SOURCE 4 STRAIN: MR-1; SOURCE 5 GENE: SYE4, SO_3392; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PACYC-DUET KEYWDS OXIDOREDUCTASE, COFACTOR-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.ELEGHEERT,A.BRIGE,S.N.SAVVIDES REVDAT 5 10-JAN-24 5K1M 1 REMARK REVDAT 4 17-JUL-19 5K1M 1 REMARK REVDAT 3 08-NOV-17 5K1M 1 JRNL REVDAT 2 27-SEP-17 5K1M 1 JRNL REVDAT 1 07-JUN-17 5K1M 0 JRNL AUTH J.ELEGHEERT,A.BRIGE,J.VAN BEEUMEN,S.N.SAVVIDES JRNL TITL STRUCTURAL DISSECTION OF SHEWANELLA ONEIDENSIS OLD YELLOW JRNL TITL 2 ENZYME 4 BOUND TO A MEISENHEIMER COMPLEX AND (NITRO)PHENOLIC JRNL TITL 3 LIGANDS. JRNL REF FEBS LETT. V. 591 3391 2017 JRNL REFN ISSN 1873-3468 JRNL PMID 28869767 JRNL DOI 10.1002/1873-3468.12833 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.020 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 47628 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.144 REMARK 3 R VALUE (WORKING SET) : 0.142 REMARK 3 FREE R VALUE : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.150 REMARK 3 FREE R VALUE TEST SET COUNT : 1975 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.8503 - 3.6085 1.00 3515 159 0.1380 0.1570 REMARK 3 2 3.6085 - 2.8669 1.00 3375 144 0.1254 0.1456 REMARK 3 3 2.8669 - 2.5053 1.00 3320 152 0.1245 0.1437 REMARK 3 4 2.5053 - 2.2766 0.98 3234 142 0.1230 0.1682 REMARK 3 5 2.2766 - 2.1137 0.97 3245 119 0.1187 0.1614 REMARK 3 6 2.1137 - 1.9892 0.98 3217 131 0.1250 0.1571 REMARK 3 7 1.9892 - 1.8896 0.98 3180 156 0.1319 0.1722 REMARK 3 8 1.8896 - 1.8074 0.98 3240 129 0.1470 0.1910 REMARK 3 9 1.8074 - 1.7379 0.98 3230 137 0.1616 0.1993 REMARK 3 10 1.7379 - 1.6779 0.99 3213 147 0.1741 0.2249 REMARK 3 11 1.6779 - 1.6255 0.99 3244 133 0.1848 0.2275 REMARK 3 12 1.6255 - 1.5791 0.99 3187 131 0.1961 0.2268 REMARK 3 13 1.5791 - 1.5375 0.99 3211 163 0.2062 0.2461 REMARK 3 14 1.5375 - 1.5000 0.99 3242 132 0.2267 0.2744 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.600 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2993 REMARK 3 ANGLE : 1.053 4097 REMARK 3 CHIRALITY : 0.062 450 REMARK 3 PLANARITY : 0.006 532 REMARK 3 DIHEDRAL : 15.617 1117 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5K1M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221601. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8148 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47629 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.37800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4B5N REMARK 200 REMARK 200 REMARK: CLOTHES PIN REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M SODIUM CITRATE TRIBASIC REMARK 280 DIHYDRATE PH 6.3, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.09000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.74000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.41500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.74000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.09000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.41500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ILE A 3 REMARK 465 GLU A 4 REMARK 465 ASN A 5 REMARK 465 THR A 6 REMARK 465 VAL A 7 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 782 O HOH A 862 2.07 REMARK 500 O HOH A 732 O HOH A 792 2.11 REMARK 500 O HOH A 501 O HOH A 543 2.12 REMARK 500 O HOH A 603 O HOH A 731 2.13 REMARK 500 O HOH A 652 O HOH A 846 2.14 REMARK 500 O HOH A 822 O HOH A 935 2.15 REMARK 500 O HOH A 712 O HOH A 824 2.16 REMARK 500 O HOH A 867 O HOH A 889 2.17 REMARK 500 O HOH A 820 O HOH A 841 2.19 REMARK 500 O HOH A 848 O HOH A 898 2.19 REMARK 500 O HOH A 501 O HOH A 504 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 775 O HOH A 840 3655 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 20 -171.44 -176.01 REMARK 500 ILE A 82 40.66 -145.27 REMARK 500 ALA A 239 -147.87 -123.63 REMARK 500 TYR A 240 11.17 81.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4KS A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4KS A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4KS A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4KS A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues 4KS A 401 and 4KS A REMARK 800 406 DBREF 5K1M A 1 355 UNP Q8EBV3 Q8EBV3_SHEON 1 355 SEQADV 5K1M VAL A 171 UNP Q8EBV3 ALA 171 CONFLICT SEQRES 1 A 355 MET THR ILE GLU ASN THR VAL ASN SER VAL GLU ASN LEU SEQRES 2 A 355 PHE ASP THR TYR LYS LEU ASN ASP THR ILE THR LEU LYS SEQRES 3 A 355 ASN ARG ILE LEU MET ALA PRO LEU THR ARG CYS MET ALA SEQRES 4 A 355 ASP ALA ASN LEU VAL PRO THR ASP ASP MET VAL ALA TYR SEQRES 5 A 355 TYR ALA ARG ARG ALA GLU ALA GLY LEU ILE ILE SER GLU SEQRES 6 A 355 ALA THR ILE ILE ARG PRO ASP ALA GLN GLY TYR PRO ASN SEQRES 7 A 355 THR PRO GLY ILE PHE THR GLN ALA GLN ILE ALA GLY TRP SEQRES 8 A 355 ARG LYS VAL THR ASP ALA VAL HIS ALA ASN GLY GLY LYS SEQRES 9 A 355 ILE PHE VAL GLN LEU TRP HIS THR GLY ARG VAL ALA HIS SEQRES 10 A 355 PRO HIS PHE PHE GLY GLY GLY ASP VAL LEU ALA PRO SER SEQRES 11 A 355 ALA GLN LYS ILE GLU GLY SER VAL PRO ARG MET ARG GLU SEQRES 12 A 355 LEU THR TYR VAL THR PRO LYS ALA VAL THR VAL GLU ASP SEQRES 13 A 355 ILE GLN GLY LEU VAL ARG ASP TYR ALA LYS ALA ALA GLU SEQRES 14 A 355 ASN VAL ILE GLU ALA GLY PHE ASP GLY VAL GLU ILE HIS SEQRES 15 A 355 GLY ALA ASN GLY TYR LEU ILE ASP GLN PHE LEU HIS HIS SEQRES 16 A 355 ASP SER ASN ARG ARG THR ASP GLU TYR GLY GLY THR PRO SEQRES 17 A 355 VAL ASN MET SER ARG PHE ALA LEU GLU VAL VAL ASP ALA SEQRES 18 A 355 ILE ILE ALA ARG ILE GLY HIS ASP ARG THR GLY LEU ARG SEQRES 19 A 355 ILE SER PRO GLY ALA TYR PHE ASN MET ALA SER ASP SER SEQRES 20 A 355 ARG ASP ARG VAL VAL PHE ASP TYR LEU LEU PRO GLU LEU SEQRES 21 A 355 GLU LYS ARG ASP LEU ALA PHE VAL HIS ILE GLY ILE PHE SEQRES 22 A 355 ASP ASP SER ILE GLU PHE ASP TYR LEU GLY GLY THR ALA SEQRES 23 A 355 SER SER TYR VAL ARG ALA HIS TYR GLY LYS THR LEU VAL SEQRES 24 A 355 GLY VAL GLY SER TYR SER ALA GLU THR ALA SER LYS ALA SEQRES 25 A 355 ILE ALA GLU ASP LYS PHE ASP LEU ILE ALA ILE GLY ARG SEQRES 26 A 355 PRO PHE ILE ALA ASN PRO ASP TYR VAL ALA LYS VAL ARG SEQRES 27 A 355 ASN SER GLU GLU LEU VAL ALA TYR SER ASP GLU MET LEU SEQRES 28 A 355 ALA SER LEU ILE HET FMN A 400 31 HET 4KS A 401 18 HET 4KS A 402 9 HET 4KS A 403 9 HET 4KS A 404 9 HET 4KS A 405 9 HET 4KS A 406 9 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM 4KS 4-METHOXYPHENOL HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 2 FMN C17 H21 N4 O9 P FORMUL 3 4KS 6(C7 H8 O2) FORMUL 9 HOH *450(H2 O) HELIX 1 AA1 VAL A 10 ASP A 15 5 6 HELIX 2 AA2 THR A 46 ARG A 55 1 10 HELIX 3 AA3 ARG A 70 GLN A 74 5 5 HELIX 4 AA4 THR A 84 ASN A 101 1 18 HELIX 5 AA5 THR A 112 ALA A 116 5 5 HELIX 6 AA6 HIS A 117 GLY A 122 5 6 HELIX 7 AA7 THR A 153 ALA A 174 1 22 HELIX 8 AA8 TYR A 187 HIS A 194 1 8 HELIX 9 AA9 THR A 207 GLY A 227 1 21 HELIX 10 AB1 ARG A 248 ARG A 263 1 16 HELIX 11 AB2 ASP A 280 GLY A 283 5 4 HELIX 12 AB3 ALA A 286 TYR A 294 1 9 HELIX 13 AB4 SER A 305 GLU A 315 1 11 HELIX 14 AB5 GLY A 324 ASN A 330 1 7 HELIX 15 AB6 ASP A 332 ASN A 339 1 8 HELIX 16 AB7 SER A 347 SER A 353 5 7 SHEET 1 AA1 2 TYR A 17 LYS A 18 0 SHEET 2 AA1 2 THR A 24 LEU A 25 -1 O LEU A 25 N TYR A 17 SHEET 1 AA2 9 ILE A 29 MET A 31 0 SHEET 2 AA2 9 LEU A 61 ILE A 68 1 O ILE A 63 N MET A 31 SHEET 3 AA2 9 ILE A 105 TRP A 110 1 O GLN A 108 N THR A 67 SHEET 4 AA2 9 GLY A 178 GLY A 183 1 O GLU A 180 N VAL A 107 SHEET 5 AA2 9 THR A 231 ILE A 235 1 O GLY A 232 N VAL A 179 SHEET 6 AA2 9 PHE A 267 ILE A 270 1 O HIS A 269 N ILE A 235 SHEET 7 AA2 9 LEU A 298 GLY A 300 1 O VAL A 299 N VAL A 268 SHEET 8 AA2 9 LEU A 320 ILE A 323 1 O ALA A 322 N GLY A 300 SHEET 9 AA2 9 ILE A 29 MET A 31 1 N LEU A 30 O ILE A 321 SHEET 1 AA3 2 LEU A 127 ALA A 128 0 SHEET 2 AA3 2 LYS A 150 ALA A 151 1 O LYS A 150 N ALA A 128 SHEET 1 AA4 2 GLU A 278 PHE A 279 0 SHEET 2 AA4 2 GLY A 284 THR A 285 -1 O GLY A 284 N PHE A 279 LINK C A4KS A 401 C1 4KS A 406 1555 1555 1.30 SITE 1 AC1 20 ALA A 32 PRO A 33 LEU A 34 THR A 35 SITE 2 AC1 20 ALA A 66 GLN A 108 HIS A 182 ASN A 185 SITE 3 AC1 20 ARG A 234 ILE A 272 PHE A 273 VAL A 301 SITE 4 AC1 20 SER A 303 GLY A 324 ARG A 325 4KS A 401 SITE 5 AC1 20 4KS A 403 HOH A 614 HOH A 630 HOH A 642 SITE 1 AC2 8 THR A 35 CYS A 37 TYR A 76 PRO A 77 SITE 2 AC2 8 VAL A 138 PRO A 139 ARG A 140 4KS A 406 SITE 1 AC3 11 ASP A 40 ALA A 41 ASN A 42 PHE A 241 SITE 2 AC3 11 PHE A 273 TYR A 346 ASP A 348 FMN A 400 SITE 3 AC3 11 4KS A 401 4KS A 406 HOH A 698 SITE 1 AC4 7 GLU A 58 ILE A 172 PHE A 176 ILE A 226 SITE 2 AC4 7 ARG A 230 ARG A 338 HOH A 651 SITE 1 AC5 7 ARG A 70 PRO A 71 PHE A 83 THR A 84 SITE 2 AC5 7 THR A 201 HOH A 518 HOH A 883 SITE 1 AC6 10 THR A 35 TYR A 76 HIS A 182 ASN A 185 SITE 2 AC6 10 TYR A 187 PHE A 241 PHE A 273 FMN A 400 SITE 3 AC6 10 4KS A 402 4KS A 403 CRYST1 52.180 54.830 103.480 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019164 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018238 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009664 0.00000