HEADER STRUCTURAL PROTEIN 19-MAY-16 5K39 TITLE THE TYPE II COHESIN DOCKERIN COMPLEX FROM CLOSTRIDIUM THERMOCELLUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELLULOSOME ANCHORING PROTEIN COHESIN REGION; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: COHESION 2 DOMAIN, RESIDUES 205-364; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DOCKERIN MODULE FROM A PROTEIN OF UNKNOWN FUNCTION; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: RESIDUES 2015-2177; COMPND 10 SYNONYM: PROTEIN CIPB DOCKERIN; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RUMINICLOSTRIDIUM THERMOCELLUM 27405; SOURCE 3 ORGANISM_TAXID: 1249482; SOURCE 4 GENE: AD2_00639; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PCF1; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: CLOSTRIDIUM THERMOCELLUM 27405; SOURCE 11 ORGANISM_TAXID: 1249482; SOURCE 12 GENE: CTHE_1806; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS S-LAYER, SECRETED, CELL WALL, MEMBRANE PROTEIN, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.VIEGAS,B.PINHEIRO,J.L.A.BRAS,M.J.ROMAO,V.ALVES,A.L.CARVALHO, AUTHOR 2 C.M.G.A.FONTES REVDAT 2 10-JAN-24 5K39 1 REMARK REVDAT 1 29-MAR-17 5K39 0 JRNL AUTH J.L.BRAS,B.A.PINHEIRO,K.CAMERON,F.CUSKIN,A.VIEGAS, JRNL AUTH 2 S.NAJMUDIN,P.BULE,V.M.PIRES,M.J.ROMAO,E.A.BAYER,H.L.SPENCER, JRNL AUTH 3 S.SMITH,H.J.GILBERT,V.D.ALVES,A.L.CARVALHO,C.M.FONTES JRNL TITL DIVERSE SPECIFICITY OF CELLULOSOME ATTACHMENT TO THE JRNL TITL 2 BACTERIAL CELL SURFACE. JRNL REF SCI REP V. 6 38292 2016 JRNL REFN ESSN 2045-2322 JRNL PMID 27924829 JRNL DOI 10.1038/SREP38292 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 19669 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2221 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.98 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.03 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1420 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1890 REMARK 3 BIN FREE R VALUE SET COUNT : 150 REMARK 3 BIN FREE R VALUE : 0.2670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2453 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 322 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.225 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.194 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.124 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.842 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2542 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3465 ; 1.154 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 332 ; 6.192 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 107 ;37.392 ;25.701 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 437 ;12.321 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;12.412 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 410 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1901 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1138 ; 0.196 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1755 ; 0.305 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 225 ; 0.125 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 33 ; 0.169 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 25 ; 0.137 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1666 ; 0.495 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2635 ; 0.787 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 998 ; 1.345 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 827 ; 2.062 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 5K39 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221194. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9735 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21909 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 39.310 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 4.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.17000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 2MB3 AND 2B59 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% (M/V) POLYETHYLENEGLYCOL (PEG) REMARK 280 3350, 4% TACSIMATE, PH 5.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 58.33500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.31500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 58.33500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 39.31500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 339 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 HIS A 170 REMARK 465 HIS A 171 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 ASN B 3 REMARK 465 ASP B 4 REMARK 465 SER B 5 REMARK 465 THR B 6 REMARK 465 LEU B 160 REMARK 465 PRO B 161 REMARK 465 SER B 162 REMARK 465 ARG B 163 REMARK 465 TYR B 164 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 73 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 158 CG CD CE NZ REMARK 470 HIS A 166 CG ND1 CD2 CE1 NE2 REMARK 470 HIS A 167 CG ND1 CD2 CE1 NE2 REMARK 470 HIS A 168 CG ND1 CD2 CE1 NE2 REMARK 470 HIS A 169 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 63 CG CD OE1 OE2 REMARK 470 LYS B 85 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N GLU B 131 O HOH B 301 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 59 -169.39 -127.76 REMARK 500 ASN A 76 70.67 67.26 REMARK 500 ASN B 72 9.35 81.16 REMARK 500 PHE B 157 42.34 -77.75 REMARK 500 ASN B 158 148.82 -175.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 359 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH A 360 DISTANCE = 6.41 ANGSTROMS REMARK 525 HOH A 361 DISTANCE = 7.15 ANGSTROMS REMARK 525 HOH A 362 DISTANCE = 8.51 ANGSTROMS REMARK 525 HOH A 363 DISTANCE = 9.14 ANGSTROMS REMARK 525 HOH B 453 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH B 454 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH B 455 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH B 456 DISTANCE = 6.37 ANGSTROMS REMARK 525 HOH B 457 DISTANCE = 6.50 ANGSTROMS REMARK 525 HOH B 458 DISTANCE = 6.92 ANGSTROMS REMARK 525 HOH B 459 DISTANCE = 8.34 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 101 OD1 REMARK 620 2 ASP B 109 OD1 83.5 REMARK 620 3 ALA B 111 O 81.8 88.0 REMARK 620 4 ASP B 116 OD1 95.5 162.0 109.6 REMARK 620 5 ASP B 116 OD2 127.5 141.1 75.9 51.2 REMARK 620 6 HOH B 358 O 159.3 76.1 94.1 105.0 70.1 REMARK 620 7 HOH B 363 O 80.2 79.1 158.9 83.1 124.2 98.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 138 OD1 REMARK 620 2 ASN B 140 OD1 81.5 REMARK 620 3 ASP B 142 OD1 85.4 82.4 REMARK 620 4 ALA B 144 O 85.5 159.5 80.8 REMARK 620 5 ASP B 149 OD1 88.0 79.5 161.4 116.0 REMARK 620 6 ASP B 149 OD2 123.4 119.4 144.3 81.0 51.8 REMARK 620 7 HOH B 302 O 155.5 80.4 76.0 106.7 104.6 80.1 REMARK 620 N 1 2 3 4 5 6 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 202 DBREF1 5K39 A 4 163 UNP A0A0U3TQ90_CLOTM DBREF2 5K39 A A0A0U3TQ90 205 364 DBREF 5K39 B 2 164 UNP A3DGE8 A3DGE8_CLOTH 2015 2177 SEQADV 5K39 MET A 1 UNP A0A0U3TQ9 INITIATING METHIONINE SEQADV 5K39 ALA A 2 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5K39 SER A 3 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5K39 LEU A 164 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5K39 GLU A 165 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5K39 HIS A 166 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5K39 HIS A 167 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5K39 HIS A 168 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5K39 HIS A 169 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5K39 HIS A 170 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5K39 HIS A 171 UNP A0A0U3TQ9 EXPRESSION TAG SEQADV 5K39 MET B 1 UNP A3DGE8 INITIATING METHIONINE SEQRES 1 A 171 MET ALA SER ALA HIS ILE ALA LEU GLU LEU ASP LYS THR SEQRES 2 A 171 LYS VAL LYS VAL GLY ASP VAL ILE VAL ALA THR VAL LYS SEQRES 3 A 171 ALA LYS ASN MET THR SER MET ALA GLY ILE GLN VAL ASN SEQRES 4 A 171 ILE LYS TYR ASP PRO GLU VAL LEU GLN ALA ILE ASP PRO SEQRES 5 A 171 ALA THR GLY LYS PRO PHE THR LYS GLU THR LEU LEU VAL SEQRES 6 A 171 ASP PRO GLU LEU LEU SER ASN ARG GLU TYR ASN PRO LEU SEQRES 7 A 171 LEU THR ALA VAL ASN ASP ILE ASN SER GLY ILE ILE ASN SEQRES 8 A 171 TYR ALA SER CYS TYR VAL TYR TRP ASP SER TYR ARG GLU SEQRES 9 A 171 SER GLY VAL SER GLU SER THR GLY ILE ILE GLY LYS VAL SEQRES 10 A 171 GLY PHE LYS VAL LEU LYS ALA ALA ASN THR THR VAL LYS SEQRES 11 A 171 LEU GLU GLU THR ARG PHE THR PRO ASN SER ILE ASP GLY SEQRES 12 A 171 THR LEU VAL ILE ASP TRP TYR GLY GLN GLN ILE VAL GLY SEQRES 13 A 171 TYR LYS VAL ILE GLN PRO ASP LEU GLU HIS HIS HIS HIS SEQRES 14 A 171 HIS HIS SEQRES 1 B 164 MET ASN ASN ASP SER THR ASP LYS THR THR VAL SER GLY SEQRES 2 B 164 TYR ILE SER VAL ASP PHE ASP TYR PRO PRO GLU SER GLU SEQRES 3 B 164 SER LYS ILE LYS SER GLY PHE ASN VAL LYS VAL ALA GLY SEQRES 4 B 164 THR GLU LEU SER THR LYS THR ASP GLU LYS GLY TYR PHE SEQRES 5 B 164 GLU ILE SER GLY ILE PRO GLY ASP MET ARG GLU PHE THR SEQRES 6 B 164 LEU GLU ILE SER LYS ARG ASN TYR LEU LYS ARG ASN VAL SEQRES 7 B 164 THR VAL ASN GLY THR GLY LYS LEU VAL VAL SER THR GLU SEQRES 8 B 164 ASP ASN PRO LEU ILE LEU TRP ALA GLY ASP VAL GLU ARG SEQRES 9 B 164 LYS GLY VAL GLN ASP ASN ALA ILE ASN MET VAL ASP VAL SEQRES 10 B 164 MET GLU ILE SER LYS VAL PHE GLY THR ARG ALA GLY ASP SEQRES 11 B 164 GLU GLU TYR VAL ALA GLU LEU ASP LEU ASN MET ASP GLY SEQRES 12 B 164 ALA ILE ASN LEU PHE ASP ILE ALA ILE VAL ILE ARG HIS SEQRES 13 B 164 PHE ASN ALA LEU PRO SER ARG TYR HET CA B 201 1 HET CA B 202 1 HETNAM CA CALCIUM ION FORMUL 3 CA 2(CA 2+) FORMUL 5 HOH *322(H2 O) HELIX 1 AA1 ASN A 72 TYR A 75 5 4 HELIX 2 AA2 TYR A 98 GLY A 106 1 9 HELIX 3 AA3 PRO B 22 GLU B 24 5 3 HELIX 4 AA4 SER B 25 SER B 31 1 7 HELIX 5 AA5 ASN B 113 PHE B 124 1 12 HELIX 6 AA6 VAL B 134 ASP B 138 5 5 HELIX 7 AA7 ASN B 146 HIS B 156 1 11 SHEET 1 AA1 5 LEU A 47 ILE A 50 0 SHEET 2 AA1 5 GLY A 112 VAL A 121 -1 O GLY A 118 N ILE A 50 SHEET 3 AA1 5 VAL A 20 LYS A 28 -1 N VAL A 25 O ILE A 114 SHEET 4 AA1 5 HIS A 5 LEU A 10 -1 N GLU A 9 O THR A 24 SHEET 5 AA1 5 LYS A 158 ILE A 160 1 O ILE A 160 N ILE A 6 SHEET 1 AA2 2 LYS A 14 VAL A 15 0 SHEET 2 AA2 2 HIS A 166 HIS A 167 1 O HIS A 166 N VAL A 15 SHEET 1 AA3 4 PRO A 77 ALA A 81 0 SHEET 2 AA3 4 ILE A 89 TYR A 96 -1 O ALA A 93 N THR A 80 SHEET 3 AA3 4 MET A 33 LYS A 41 -1 N ALA A 34 O TYR A 96 SHEET 4 AA3 4 LYS A 130 LEU A 131 -1 O LYS A 130 N LYS A 41 SHEET 1 AA4 4 PRO A 77 ALA A 81 0 SHEET 2 AA4 4 ILE A 89 TYR A 96 -1 O ALA A 93 N THR A 80 SHEET 3 AA4 4 MET A 33 LYS A 41 -1 N ALA A 34 O TYR A 96 SHEET 4 AA4 4 THR A 144 ASP A 148 -1 O ILE A 147 N ALA A 34 SHEET 1 AA5 3 TYR B 51 ILE B 57 0 SHEET 2 AA5 3 THR B 9 SER B 16 -1 N THR B 9 O ILE B 57 SHEET 3 AA5 3 LYS B 85 VAL B 87 1 O LEU B 86 N THR B 10 SHEET 1 AA6 3 TYR B 51 ILE B 57 0 SHEET 2 AA6 3 THR B 9 SER B 16 -1 N THR B 9 O ILE B 57 SHEET 3 AA6 3 LEU B 95 ILE B 96 1 O LEU B 95 N TYR B 14 SHEET 1 AA7 4 SER B 43 LYS B 45 0 SHEET 2 AA7 4 ASN B 34 VAL B 37 -1 N VAL B 35 O THR B 44 SHEET 3 AA7 4 GLU B 63 SER B 69 -1 O GLU B 67 N LYS B 36 SHEET 4 AA7 4 ARG B 76 ASN B 81 -1 O VAL B 78 N LEU B 66 LINK OD1 ASP B 101 CA CA B 201 1555 1555 2.45 LINK OD1 ASP B 109 CA CA B 201 1555 1555 2.33 LINK O ALA B 111 CA CA B 201 1555 1555 2.28 LINK OD1 ASP B 116 CA CA B 201 1555 1555 2.49 LINK OD2 ASP B 116 CA CA B 201 1555 1555 2.57 LINK OD1 ASP B 138 CA CA B 202 1555 1555 2.36 LINK OD1 ASN B 140 CA CA B 202 1555 1555 2.31 LINK OD1 ASP B 142 CA CA B 202 1555 1555 2.49 LINK O ALA B 144 CA CA B 202 1555 1555 2.25 LINK OD1 ASP B 149 CA CA B 202 1555 1555 2.60 LINK OD2 ASP B 149 CA CA B 202 1555 1555 2.39 LINK CA CA B 201 O HOH B 358 1555 1555 2.33 LINK CA CA B 201 O HOH B 363 1555 1555 2.52 LINK CA CA B 202 O HOH B 302 1555 1555 2.51 SITE 1 AC1 6 ASP B 101 ASP B 109 ALA B 111 ASP B 116 SITE 2 AC1 6 HOH B 358 HOH B 363 SITE 1 AC2 6 ASP B 138 ASN B 140 ASP B 142 ALA B 144 SITE 2 AC2 6 ASP B 149 HOH B 302 CRYST1 116.670 78.630 35.800 90.00 95.87 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008571 0.000000 0.000881 0.00000 SCALE2 0.000000 0.012718 0.000000 0.00000 SCALE3 0.000000 0.000000 0.028080 0.00000