HEADER OXIDOREDUCTASE 22-MAY-16 5K4Z TITLE M. THERMORESISTIBLE IMPDH IN COMPLEX WITH IMP AND COMPOUND 6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE,INOSINE-5'- COMPND 3 MONOPHOSPHATE DEHYDROGENASE; COMPND 4 CHAIN: A; COMPND 5 EC: 1.1.1.205,1.1.1.205; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM THERMORESISTIBILE; SOURCE 3 ORGANISM_TAXID: 1797; SOURCE 4 GENE: RMCT_0580; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS IMPDH, GUAB2, INHIBITOR-COMPLEX, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.PACITTO,D.B.ASCHER,T.L.BLUNDELL REVDAT 2 25-JAN-17 5K4Z 1 JRNL REVDAT 1 19-OCT-16 5K4Z 0 JRNL AUTH Y.PARK,A.PACITTO,T.BAYLISS,L.A.CLEGHORN,Z.WANG,T.HARTMAN, JRNL AUTH 2 K.ARORA,T.R.IOERGER,J.SACCHETTINI,M.RIZZI,S.DONINI, JRNL AUTH 3 T.L.BLUNDELL,D.B.ASCHER,K.RHEE,A.BREDA,N.ZHOU,V.DARTOIS, JRNL AUTH 4 S.R.JONNALA,L.E.VIA,V.MIZRAHI,O.EPEMOLU,L.STOJANOVSKI, JRNL AUTH 5 F.SIMEONS,M.OSUNA-CABELLO,L.ELLIS,C.J.MACKENZIE,A.R.SMITH, JRNL AUTH 6 S.H.DAVIS,D.MURUGESAN,K.I.BUCHANAN,P.A.TURNER,M.HUGGETT, JRNL AUTH 7 F.ZUCCOTTO,M.J.REBOLLO-LOPEZ,M.J.LAFUENTE-MONASTERIO,O.SANZ, JRNL AUTH 8 G.S.DIAZ,J.LELIEVRE,L.BALLELL,C.SELENSKI,M.AXTMAN, JRNL AUTH 9 S.GHIDELLI-DISSE,H.PFLAUMER,M.BOSCHE,G.DREWES,G.M.FREIBERG, JRNL AUTH10 M.D.KURNICK,M.SRIKUMARAN,D.J.KEMPF,S.R.GREEN,P.C.RAY,K.READ, JRNL AUTH11 P.WYATT,C.E.BARRY,H.I.BOSHOFF JRNL TITL ESSENTIAL BUT NOT VULNERABLE: INDAZOLE SULFONAMIDES JRNL TITL 2 TARGETING INOSINE MONOPHOSPHATE DEHYDROGENASE AS POTENTIAL JRNL TITL 3 LEADS AGAINST MYCOBACTERIUM TUBERCULOSIS. JRNL REF ACS INFECT DIS V. 3 18 2017 JRNL REFN ESSN 2373-8227 JRNL PMID 27704782 JRNL DOI 10.1021/ACSINFECDIS.6B00103 REMARK 2 REMARK 2 RESOLUTION. 1.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 40558 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.790 REMARK 3 FREE R VALUE TEST SET COUNT : 1941 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.6515 - 3.9518 1.00 2806 159 0.1541 0.1590 REMARK 3 2 3.9518 - 3.1369 1.00 2752 168 0.1672 0.1766 REMARK 3 3 3.1369 - 2.7405 1.00 2782 133 0.1882 0.1921 REMARK 3 4 2.7405 - 2.4899 1.00 2771 125 0.1875 0.2177 REMARK 3 5 2.4899 - 2.3115 1.00 2750 174 0.1834 0.1921 REMARK 3 6 2.3115 - 2.1752 0.98 2695 141 0.2482 0.2948 REMARK 3 7 2.1752 - 2.0663 1.00 2767 124 0.2040 0.2140 REMARK 3 8 2.0663 - 1.9763 1.00 2804 110 0.2181 0.2053 REMARK 3 9 1.9763 - 1.9002 1.00 2729 117 0.3484 0.3271 REMARK 3 10 1.9002 - 1.8347 0.98 2768 118 0.3192 0.3681 REMARK 3 11 1.8347 - 1.7773 1.00 2744 135 0.2359 0.2642 REMARK 3 12 1.7773 - 1.7265 1.00 2751 137 0.2622 0.3013 REMARK 3 13 1.7265 - 1.6810 1.00 2774 134 0.2682 0.2994 REMARK 3 14 1.6810 - 1.6400 1.00 2724 166 0.2858 0.2864 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.750 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2391 REMARK 3 ANGLE : 1.213 3266 REMARK 3 CHIRALITY : 0.058 402 REMARK 3 PLANARITY : 0.005 419 REMARK 3 DIHEDRAL : 13.767 823 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5K4Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221466. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40582 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.640 REMARK 200 RESOLUTION RANGE LOW (A) : 44.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.27000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: M. THERMO IMPDH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM ACETATE PH 5.5, 200MM REMARK 280 CALCIUM CHLORIDE, 8-14% ISO-PROPANOL, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 44.63500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.63500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 42.38000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 44.63500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.63500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 42.38000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 44.63500 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 44.63500 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 42.38000 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 44.63500 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 44.63500 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 42.38000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -93.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 89.27000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 89.27000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 89.27000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 89.27000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 ILE A 4 REMARK 465 ALA A 5 REMARK 465 GLU A 6 REMARK 465 ARG A 7 REMARK 465 SER A 8 REMARK 465 VAL A 9 REMARK 465 PRO A 10 REMARK 465 ILE A 11 REMARK 465 ALA A 12 REMARK 465 VAL A 13 REMARK 465 PRO A 14 REMARK 465 GLY A 292 REMARK 465 ARG A 293 REMARK 465 GLY A 294 REMARK 465 GLY A 295 REMARK 465 ALA A 296 REMARK 465 LYS A 297 REMARK 465 SER A 298 REMARK 465 TYR A 299 REMARK 465 SER A 300 REMARK 465 LYS A 301 REMARK 465 ASP A 302 REMARK 465 ARG A 303 REMARK 465 TYR A 304 REMARK 465 PHE A 305 REMARK 465 GLN A 306 REMARK 465 ASP A 307 REMARK 465 ASP A 308 REMARK 465 ALA A 309 REMARK 465 LEU A 310 REMARK 465 SER A 311 REMARK 465 GLU A 312 REMARK 465 ASP A 313 REMARK 465 LYS A 314 REMARK 465 LYS A 370 REMARK 465 GLU A 371 REMARK 465 SER A 372 REMARK 465 HIS A 373 REMARK 465 PRO A 374 REMARK 465 HIS A 375 REMARK 465 ASP A 376 REMARK 465 ILE A 377 REMARK 465 THR A 378 REMARK 465 MET A 379 REMARK 465 THR A 380 REMARK 465 VAL A 381 REMARK 465 GLU A 382 REMARK 465 ALA A 383 REMARK 465 PRO A 384 REMARK 465 ASN A 385 REMARK 465 TYR A 386 REMARK 465 TYR A 387 REMARK 465 ALA A 388 REMARK 465 ARG A 389 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 45 CG CD1 CD2 REMARK 470 GLU A 99 CG CD OE1 OE2 REMARK 470 ASP A 123 CG OD1 OD2 REMARK 470 ARG A 150 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 151 CG CD CE NZ REMARK 470 ARG A 158 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 165 CG OD1 OD2 REMARK 470 GLU A 166 CG CD OE1 OE2 REMARK 470 ASN A 274 CG OD1 ND2 REMARK 470 LYS A 276 CG CD CE NZ REMARK 470 LEU A 287 CG CD1 CD2 REMARK 470 GLN A 291 CG CD OE1 NE2 REMARK 470 ARG A 327 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 289 O HOH A 501 1.83 REMARK 500 O HOH A 664 O HOH A 689 1.89 REMARK 500 OD2 ASP A 20 O HOH A 502 1.91 REMARK 500 OE2 GLU A 355 O HOH A 503 1.99 REMARK 500 O HOH A 622 O HOH A 630 2.00 REMARK 500 O HOH A 668 O HOH A 708 2.00 REMARK 500 O HOH A 677 O HOH A 684 2.04 REMARK 500 O PRO A 267 O HOH A 504 2.07 REMARK 500 O HOH A 723 O HOH A 724 2.12 REMARK 500 O HOH A 620 O HOH A 659 2.15 REMARK 500 O ASP A 123 O HOH A 505 2.18 REMARK 500 O HOH A 651 O HOH A 691 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 73 -56.82 -126.10 REMARK 500 GLU A 75 -162.53 -118.09 REMARK 500 HIS A 148 44.68 -76.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 723 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH A 724 DISTANCE = 6.65 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6Q8 A 402 DBREF1 5K4Z A 3 110 UNP A0A100XBM0_MYCTH DBREF2 5K4Z A A0A100XBM0 15 122 DBREF1 5K4Z A 113 389 UNP A0A100XBM0_MYCTH DBREF2 5K4Z A A0A100XBM0 250 526 SEQADV 5K4Z GLY A 1 UNP A0A100XBM EXPRESSION TAG SEQADV 5K4Z SER A 2 UNP A0A100XBM EXPRESSION TAG SEQADV 5K4Z GLY A 111 UNP A0A100XBM LINKER SEQADV 5K4Z GLY A 112 UNP A0A100XBM LINKER SEQRES 1 A 389 GLY SER SER ILE ALA GLU ARG SER VAL PRO ILE ALA VAL SEQRES 2 A 389 PRO VAL PRO THR GLY GLY ASP ASP PRO THR LYS ILE ALA SEQRES 3 A 389 MET LEU GLY LEU THR PHE ASP ASP VAL LEU LEU LEU PRO SEQRES 4 A 389 ALA ALA SER ASP VAL LEU PRO ALA ASN ALA ASP THR SER SEQRES 5 A 389 SER GLN LEU THR LYS LYS ILE ARG LEU LYS VAL PRO LEU SEQRES 6 A 389 VAL SER SER ALA MET ASP THR VAL THR GLU ALA ARG MET SEQRES 7 A 389 ALA ILE ALA MET ALA ARG ALA GLY GLY MET GLY VAL LEU SEQRES 8 A 389 HIS ARG ASN LEU PRO VAL ALA GLU GLN ALA ALA GLN VAL SEQRES 9 A 389 GLU THR VAL LYS ARG SER GLY GLY LEU LEU VAL GLY ALA SEQRES 10 A 389 ALA VAL GLY VAL GLY ASP ASP ALA TRP GLU ARG ALA MET SEQRES 11 A 389 ALA LEU ARG ASP ALA GLY VAL ASP VAL LEU VAL VAL ASP SEQRES 12 A 389 THR ALA HIS ALA HIS ASN ARG LYS VAL LEU ASP MET VAL SEQRES 13 A 389 HIS ARG LEU LYS THR THR VAL GLY ASP GLU ILE GLU VAL SEQRES 14 A 389 VAL GLY GLY ASN VAL ALA THR ARG ALA ALA ALA ALA ALA SEQRES 15 A 389 LEU VAL GLU ALA GLY ALA ASP ALA VAL LYS VAL GLY VAL SEQRES 16 A 389 GLY PRO GLY SER ILE CYS THR THR ARG VAL VAL ALA GLY SEQRES 17 A 389 VAL GLY ALA PRO GLN ILE THR ALA ILE LEU GLU ALA VAL SEQRES 18 A 389 ALA ALA CYS ALA PRO HIS GLY VAL PRO VAL ILE ALA ASP SEQRES 19 A 389 GLY GLY LEU GLN TYR SER GLY ASP ILE ALA LYS ALA LEU SEQRES 20 A 389 ALA ALA GLY ALA SER THR ALA MET LEU GLY SER LEU LEU SEQRES 21 A 389 ALA GLY THR ALA GLU SER PRO GLY GLU LEU ILE LEU VAL SEQRES 22 A 389 ASN GLY LYS GLN PHE LYS SER TYR ARG GLY MET GLY SER SEQRES 23 A 389 LEU GLY ALA MET GLN GLY ARG GLY GLY ALA LYS SER TYR SEQRES 24 A 389 SER LYS ASP ARG TYR PHE GLN ASP ASP ALA LEU SER GLU SEQRES 25 A 389 ASP LYS LEU VAL PRO GLU GLY ILE GLU GLY ARG VAL PRO SEQRES 26 A 389 PHE ARG GLY PRO LEU SER THR VAL ILE HIS GLN LEU VAL SEQRES 27 A 389 GLY GLY LEU ARG ALA ALA MET GLY TYR THR GLY SER ALA SEQRES 28 A 389 THR ILE GLU GLU LEU GLN GLN ALA GLN PHE VAL GLN ILE SEQRES 29 A 389 THR ALA ALA GLY LEU LYS GLU SER HIS PRO HIS ASP ILE SEQRES 30 A 389 THR MET THR VAL GLU ALA PRO ASN TYR TYR ALA ARG HET IMP A 401 23 HET 6Q8 A 402 30 HETNAM IMP INOSINIC ACID HETNAM 6Q8 ~{N}-(4-FLUOROPHENYL)-4-(2~{H}-INDAZOL-6-YLSULFAMOYL)- HETNAM 2 6Q8 3,5-DIMETHYL-1~{H}-PYRROLE-2-CARBOXAMIDE FORMUL 2 IMP C10 H13 N4 O8 P FORMUL 3 6Q8 C20 H18 F N5 O3 S FORMUL 4 HOH *224(H2 O) HELIX 1 AA1 THR A 31 ASP A 33 5 3 HELIX 2 AA2 LEU A 45 ALA A 49 5 5 HELIX 3 AA3 GLU A 75 ALA A 85 1 11 HELIX 4 AA4 PRO A 96 ARG A 109 1 14 HELIX 5 AA5 ASP A 124 GLY A 136 1 13 HELIX 6 AA6 ASN A 149 GLY A 164 1 16 HELIX 7 AA7 THR A 176 GLY A 187 1 12 HELIX 8 AA8 THR A 202 ALA A 207 1 6 HELIX 9 AA9 PRO A 212 ALA A 225 1 14 HELIX 10 AB1 PRO A 226 GLY A 228 5 3 HELIX 11 AB2 TYR A 239 ALA A 249 1 11 HELIX 12 AB3 GLY A 257 GLY A 262 1 6 HELIX 13 AB4 SER A 286 GLN A 291 1 6 HELIX 14 AB5 PRO A 329 GLY A 349 1 21 HELIX 15 AB6 THR A 352 GLN A 357 1 6 SHEET 1 AA1 2 VAL A 35 LEU A 37 0 SHEET 2 AA1 2 PHE A 361 GLN A 363 -1 O VAL A 362 N LEU A 36 SHEET 1 AA2 2 SER A 53 GLN A 54 0 SHEET 2 AA2 2 ARG A 60 LEU A 61 -1 O LEU A 61 N SER A 53 SHEET 1 AA3 9 LEU A 65 SER A 67 0 SHEET 2 AA3 9 MET A 88 LEU A 91 1 O MET A 88 N SER A 67 SHEET 3 AA3 9 GLY A 116 VAL A 119 1 O GLY A 116 N LEU A 91 SHEET 4 AA3 9 VAL A 139 ASP A 143 1 O VAL A 141 N ALA A 117 SHEET 5 AA3 9 GLU A 168 VAL A 174 1 O VAL A 170 N LEU A 140 SHEET 6 AA3 9 ALA A 190 VAL A 193 1 O LYS A 192 N GLY A 171 SHEET 7 AA3 9 VAL A 231 ASP A 234 1 O ASP A 234 N VAL A 193 SHEET 8 AA3 9 THR A 253 LEU A 256 1 O THR A 253 N ALA A 233 SHEET 9 AA3 9 LEU A 65 SER A 67 1 N VAL A 66 O LEU A 256 SHEET 1 AA4 3 ILE A 271 VAL A 273 0 SHEET 2 AA4 3 LYS A 276 ARG A 282 -1 O PHE A 278 N ILE A 271 SHEET 3 AA4 3 GLU A 321 PRO A 325 -1 O GLY A 322 N TYR A 281 CISPEP 1 GLY A 172 ASN A 173 0 -0.53 SITE 1 AC1 24 SER A 68 MET A 70 GLY A 198 SER A 199 SITE 2 AC1 24 ILE A 200 CYS A 201 ASP A 234 GLY A 235 SITE 3 AC1 24 GLY A 236 MET A 255 GLY A 257 SER A 258 SITE 4 AC1 24 TYR A 281 GLY A 283 MET A 284 GLY A 285 SITE 5 AC1 24 GLU A 318 GLY A 319 6Q8 A 402 HOH A 528 SITE 6 AC1 24 HOH A 530 HOH A 536 HOH A 595 HOH A 616 SITE 1 AC2 15 THR A 144 ALA A 145 HIS A 146 ASN A 149 SITE 2 AC2 15 VAL A 152 GLY A 194 VAL A 195 GLY A 196 SITE 3 AC2 15 THR A 203 MET A 284 GLY A 285 GLU A 318 SITE 4 AC2 15 IMP A 401 HOH A 516 HOH A 640 CRYST1 89.270 89.270 84.760 90.00 90.00 90.00 I 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011202 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011202 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011798 0.00000