data_5K7R # _entry.id 5K7R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.298 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5K7R WWPDB D_1000221819 EMDB EMD-8220 # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB . EMD-8220 'associated EM volume' EMDB . EMD-8216 'other EM volume' EMDB . EMD-8217 'other EM volume' EMDB . EMD-8218 'other EM volume' EMDB . EMD-8219 'other EM volume' EMDB . EMD-8221 'other EM volume' EMDB . EMD-8222 'other EM volume' PDB . 5K7N unspecified PDB . 5K7O unspecified PDB . 5K7P unspecified PDB . 5K7Q unspecified PDB . 5K7S unspecified PDB . 5K7T unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5K7R _pdbx_database_status.recvd_initial_deposition_date 2016-05-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'de la Cruz, M.J.' 1 ? 'Hattne, J.' 2 ? 'Shi, D.' 3 ? 'Seidler, P.' 4 ? 'Rodriguez, J.' 5 ? 'Reyes, F.E.' 6 ? 'Sawaya, M.R.' 7 ? 'Cascio, D.' 8 ? 'Eisenberg, D.' 9 ? 'Gonen, T.' 10 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat. Methods' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1548-7105 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 14 _citation.language ? _citation.page_first 399 _citation.page_last 402 _citation.title 'Atomic-resolution structures from fragmented protein crystals with the cryoEM method MicroED.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/nmeth.4178 _citation.pdbx_database_id_PubMed 28192420 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'de la Cruz, M.J.' 1 ? primary 'Hattne, J.' 2 ? primary 'Shi, D.' 3 ? primary 'Seidler, P.' 4 ? primary 'Rodriguez, J.' 5 ? primary 'Reyes, F.E.' 6 ? primary 'Sawaya, M.R.' 7 ? primary 'Cascio, D.' 8 ? primary 'Weiss, S.C.' 9 ? primary 'Kim, S.K.' 10 ? primary 'Hinck, C.S.' 11 ? primary 'Hinck, A.P.' 12 ? primary 'Calero, G.' 13 ? primary 'Eisenberg, D.' 14 ? primary 'Gonen, T.' 15 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5K7R _cell.details ? _cell.formula_units_Z ? _cell.length_a 53.184 _cell.length_a_esd ? _cell.length_b 56.428 _cell.length_b_esd ? _cell.length_c 64.672 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5K7R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Cationic trypsin' 23324.287 1 3.4.21.4 ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 3 water nat water 18.015 195 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Beta-trypsin # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNT LNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNM FCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN ; _entity_poly.pdbx_seq_one_letter_code_can ;IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNT LNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNM FCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 VAL n 1 3 GLY n 1 4 GLY n 1 5 TYR n 1 6 THR n 1 7 CYS n 1 8 GLY n 1 9 ALA n 1 10 ASN n 1 11 THR n 1 12 VAL n 1 13 PRO n 1 14 TYR n 1 15 GLN n 1 16 VAL n 1 17 SER n 1 18 LEU n 1 19 ASN n 1 20 SER n 1 21 GLY n 1 22 TYR n 1 23 HIS n 1 24 PHE n 1 25 CYS n 1 26 GLY n 1 27 GLY n 1 28 SER n 1 29 LEU n 1 30 ILE n 1 31 ASN n 1 32 SER n 1 33 GLN n 1 34 TRP n 1 35 VAL n 1 36 VAL n 1 37 SER n 1 38 ALA n 1 39 ALA n 1 40 HIS n 1 41 CYS n 1 42 TYR n 1 43 LYS n 1 44 SER n 1 45 GLY n 1 46 ILE n 1 47 GLN n 1 48 VAL n 1 49 ARG n 1 50 LEU n 1 51 GLY n 1 52 GLU n 1 53 ASP n 1 54 ASN n 1 55 ILE n 1 56 ASN n 1 57 VAL n 1 58 VAL n 1 59 GLU n 1 60 GLY n 1 61 ASN n 1 62 GLU n 1 63 GLN n 1 64 PHE n 1 65 ILE n 1 66 SER n 1 67 ALA n 1 68 SER n 1 69 LYS n 1 70 SER n 1 71 ILE n 1 72 VAL n 1 73 HIS n 1 74 PRO n 1 75 SER n 1 76 TYR n 1 77 ASN n 1 78 SER n 1 79 ASN n 1 80 THR n 1 81 LEU n 1 82 ASN n 1 83 ASN n 1 84 ASP n 1 85 ILE n 1 86 MET n 1 87 LEU n 1 88 ILE n 1 89 LYS n 1 90 LEU n 1 91 LYS n 1 92 SER n 1 93 ALA n 1 94 ALA n 1 95 SER n 1 96 LEU n 1 97 ASN n 1 98 SER n 1 99 ARG n 1 100 VAL n 1 101 ALA n 1 102 SER n 1 103 ILE n 1 104 SER n 1 105 LEU n 1 106 PRO n 1 107 THR n 1 108 SER n 1 109 CYS n 1 110 ALA n 1 111 SER n 1 112 ALA n 1 113 GLY n 1 114 THR n 1 115 GLN n 1 116 CYS n 1 117 LEU n 1 118 ILE n 1 119 SER n 1 120 GLY n 1 121 TRP n 1 122 GLY n 1 123 ASN n 1 124 THR n 1 125 LYS n 1 126 SER n 1 127 SER n 1 128 GLY n 1 129 THR n 1 130 SER n 1 131 TYR n 1 132 PRO n 1 133 ASP n 1 134 VAL n 1 135 LEU n 1 136 LYS n 1 137 CYS n 1 138 LEU n 1 139 LYS n 1 140 ALA n 1 141 PRO n 1 142 ILE n 1 143 LEU n 1 144 SER n 1 145 ASP n 1 146 SER n 1 147 SER n 1 148 CYS n 1 149 LYS n 1 150 SER n 1 151 ALA n 1 152 TYR n 1 153 PRO n 1 154 GLY n 1 155 GLN n 1 156 ILE n 1 157 THR n 1 158 SER n 1 159 ASN n 1 160 MET n 1 161 PHE n 1 162 CYS n 1 163 ALA n 1 164 GLY n 1 165 TYR n 1 166 LEU n 1 167 GLU n 1 168 GLY n 1 169 GLY n 1 170 LYS n 1 171 ASP n 1 172 SER n 1 173 CYS n 1 174 GLN n 1 175 GLY n 1 176 ASP n 1 177 SER n 1 178 GLY n 1 179 GLY n 1 180 PRO n 1 181 VAL n 1 182 VAL n 1 183 CYS n 1 184 SER n 1 185 GLY n 1 186 LYS n 1 187 LEU n 1 188 GLN n 1 189 GLY n 1 190 ILE n 1 191 VAL n 1 192 SER n 1 193 TRP n 1 194 GLY n 1 195 SER n 1 196 GLY n 1 197 CYS n 1 198 ALA n 1 199 GLN n 1 200 LYS n 1 201 ASN n 1 202 LYS n 1 203 PRO n 1 204 GLY n 1 205 VAL n 1 206 TYR n 1 207 THR n 1 208 LYS n 1 209 VAL n 1 210 CYS n 1 211 ASN n 1 212 TYR n 1 213 VAL n 1 214 SER n 1 215 TRP n 1 216 ILE n 1 217 LYS n 1 218 GLN n 1 219 THR n 1 220 ILE n 1 221 ALA n 1 222 SER n 1 223 ASN n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 223 _entity_src_nat.common_name Bovine _entity_src_nat.pdbx_organism_scientific 'Bos taurus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9913 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TRY1_BOVIN _struct_ref.pdbx_db_accession P00760 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNT LNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNM FCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN ; _struct_ref.pdbx_align_begin 24 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5K7R _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 223 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00760 _struct_ref_seq.db_align_beg 24 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 246 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 24 _struct_ref_seq.pdbx_auth_seq_align_end 246 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5K7R _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON CRYSTALLOGRAPHY' _exptl.method_details ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5K7R _reflns.d_resolution_high 1.50 _reflns.d_resolution_low 27.63 _reflns.number_all 145833 _reflns.number_obs 23542 _reflns.percent_possible_obs 73.8 _reflns.pdbx_redundancy 6.2 _reflns.pdbx_Rmerge_I_obs 0.773 _reflns.pdbx_Rpim_I_all 0.332 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 2.3 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? # loop_ _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_diffrn_id _reflns_shell.meanI_over_sigI_obs 1 1.50 1.53 402 281 18.2 3.632 3.240 1.4 ? 0.3 ? ? 2 8.22 27.63 1609 217 94.2 0.210 0.078 7.4 ? 7.6 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5K7R _refine.pdbx_refine_id 'ELECTRON CRYSTALLOGRAPHY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.700 _refine.ls_d_res_low 25.860 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 19277 _refine.ls_number_reflns_R_free 919 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 87.50 _refine.ls_percent_reflns_R_free 4.77 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2495 _refine.ls_R_factor_R_free 0.2811 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2479 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.86 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.33 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON CRYSTALLOGRAPHY' ? 0.005 ? 1666 ? f_bond_d ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 0.739 ? 2264 ? f_angle_d ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 12.115 ? 1000 ? f_dihedral_angle_d ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 0.049 ? 254 ? f_chiral_restr ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 0.004 ? 289 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'ELECTRON CRYSTALLOGRAPHY' 1.7001 1.7897 . . 69 1668 56.00 . . . 0.4237 . 0.3872 . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 1.7897 1.9018 . . 111 2261 76.00 . . . 0.4346 . 0.3621 . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 1.9018 2.0486 . . 126 2671 90.00 . . . 0.3606 . 0.3165 . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 2.0486 2.2546 . . 141 2884 97.00 . . . 0.3386 . 0.2691 . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 2.2546 2.5806 . . 168 2893 97.00 . . . 0.2715 . 0.2429 . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 2.5806 3.2503 . . 173 2916 97.00 . . . 0.2352 . 0.2154 . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 3.2503 25.8634 . . 131 3065 97.00 . . . 0.1804 . 0.1664 . . . . . . . . . . # _struct.entry_id 5K7R _struct.title 'MicroED structure of trypsin at 1.7 A resolution' _struct.pdbx_descriptor 'Cationic trypsin (E.C.3.4.21.4)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5K7R _struct_keywords.text Hydrolase _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 38 ? TYR A 42 ? ALA A 61 TYR A 65 5 ? 5 HELX_P HELX_P2 AA2 SER A 144 ? TYR A 152 ? SER A 167 TYR A 175 1 ? 9 HELX_P HELX_P3 AA3 TYR A 212 ? ASN A 223 ? TYR A 235 ASN A 246 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 137 SG ? ? A CYS 30 A CYS 160 1_555 ? ? ? ? ? ? ? 2.027 ? disulf2 disulf ? ? A CYS 25 SG ? ? ? 1_555 A CYS 41 SG ? ? A CYS 48 A CYS 64 1_555 ? ? ? ? ? ? ? 2.024 ? disulf3 disulf ? ? A CYS 109 SG ? ? ? 1_555 A CYS 210 SG ? ? A CYS 132 A CYS 233 1_555 ? ? ? ? ? ? ? 2.048 ? disulf4 disulf ? ? A CYS 116 SG ? ? ? 1_555 A CYS 183 SG ? ? A CYS 139 A CYS 206 1_555 ? ? ? ? ? ? ? 2.026 ? disulf5 disulf ? ? A CYS 148 SG ? ? ? 1_555 A CYS 162 SG ? ? A CYS 171 A CYS 185 1_555 ? ? ? ? ? ? ? 2.030 ? disulf6 disulf ? ? A CYS 173 SG ? ? ? 1_555 A CYS 197 SG ? ? A CYS 196 A CYS 220 1_555 ? ? ? ? ? ? ? 2.026 ? metalc1 metalc ? ? A GLU 52 OE1 ? ? ? 1_555 B CA . CA ? ? A GLU 75 A CA 301 1_555 ? ? ? ? ? ? ? 2.321 ? metalc2 metalc ? ? A ASN 54 O ? ? ? 1_555 B CA . CA ? ? A ASN 77 A CA 301 1_555 ? ? ? ? ? ? ? 2.317 ? metalc3 metalc ? ? A VAL 57 O ? ? ? 1_555 B CA . CA ? ? A VAL 80 A CA 301 1_555 ? ? ? ? ? ? ? 2.457 ? metalc4 metalc ? ? A GLU 59 OE1 ? ? ? 1_555 B CA . CA ? ? A GLU 82 A CA 301 1_555 ? ? ? ? ? ? ? 2.981 ? metalc5 metalc ? ? A GLU 62 OE2 ? ? ? 1_555 B CA . CA ? ? A GLU 85 A CA 301 1_555 ? ? ? ? ? ? ? 2.406 ? metalc6 metalc ? ? B CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 301 A HOH 527 1_555 ? ? ? ? ? ? ? 2.406 ? metalc7 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 302 A HOH 559 1_555 ? ? ? ? ? ? ? 2.480 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 5 ? THR A 6 ? TYR A 28 THR A 29 AA1 2 LYS A 136 ? PRO A 141 ? LYS A 159 PRO A 164 AA1 3 GLN A 115 ? GLY A 120 ? GLN A 138 GLY A 143 AA1 4 PRO A 180 ? CYS A 183 ? PRO A 203 CYS A 206 AA1 5 LYS A 186 ? TRP A 193 ? LYS A 209 TRP A 216 AA1 6 GLY A 204 ? LYS A 208 ? GLY A 227 LYS A 231 AA1 7 MET A 160 ? ALA A 163 ? MET A 183 ALA A 186 AA2 1 GLN A 15 ? ASN A 19 ? GLN A 38 ASN A 42 AA2 2 HIS A 23 ? ASN A 31 ? HIS A 46 ASN A 54 AA2 3 TRP A 34 ? SER A 37 ? TRP A 57 SER A 60 AA2 4 MET A 86 ? LEU A 90 ? MET A 109 LEU A 113 AA2 5 GLN A 63 ? VAL A 72 ? GLN A 86 VAL A 95 AA2 6 GLN A 47 ? LEU A 50 ? GLN A 70 LEU A 73 AA2 7 GLN A 15 ? ASN A 19 ? GLN A 38 ASN A 42 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TYR A 5 ? N TYR A 28 O CYS A 137 ? O CYS A 160 AA1 2 3 O LEU A 138 ? O LEU A 161 N ILE A 118 ? N ILE A 141 AA1 3 4 N LEU A 117 ? N LEU A 140 O VAL A 182 ? O VAL A 205 AA1 4 5 N CYS A 183 ? N CYS A 206 O LYS A 186 ? O LYS A 209 AA1 5 6 N TRP A 193 ? N TRP A 216 O VAL A 205 ? O VAL A 228 AA1 6 7 O TYR A 206 ? O TYR A 229 N PHE A 161 ? N PHE A 184 AA2 1 2 N LEU A 18 ? N LEU A 41 O CYS A 25 ? O CYS A 48 AA2 2 3 N SER A 28 ? N SER A 51 O VAL A 36 ? O VAL A 59 AA2 3 4 N VAL A 35 ? N VAL A 58 O ILE A 88 ? O ILE A 111 AA2 4 5 O LEU A 87 ? O LEU A 110 N ILE A 71 ? N ILE A 94 AA2 5 6 O ILE A 65 ? O ILE A 88 N VAL A 48 ? N VAL A 71 AA2 6 7 O GLN A 47 ? O GLN A 70 N ASN A 19 ? N ASN A 42 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 301 ? 6 'binding site for residue CA A 301' AC2 Software A CA 302 ? 2 'binding site for residue CA A 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLU A 52 ? GLU A 75 . ? 1_555 ? 2 AC1 6 ASN A 54 ? ASN A 77 . ? 1_555 ? 3 AC1 6 VAL A 57 ? VAL A 80 . ? 1_555 ? 4 AC1 6 GLU A 59 ? GLU A 82 . ? 1_555 ? 5 AC1 6 GLU A 62 ? GLU A 85 . ? 1_555 ? 6 AC1 6 HOH D . ? HOH A 527 . ? 1_555 ? 7 AC2 2 SER A 177 ? SER A 200 . ? 1_555 ? 8 AC2 2 HOH D . ? HOH A 559 . ? 1_555 ? # _atom_sites.entry_id 5K7R _atom_sites.fract_transf_matrix[1][1] 0.018803 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017722 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015463 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 24 24 ILE ILE A . n A 1 2 VAL 2 25 25 VAL VAL A . n A 1 3 GLY 3 26 26 GLY GLY A . n A 1 4 GLY 4 27 27 GLY GLY A . n A 1 5 TYR 5 28 28 TYR TYR A . n A 1 6 THR 6 29 29 THR THR A . n A 1 7 CYS 7 30 30 CYS CYS A . n A 1 8 GLY 8 31 31 GLY GLY A . n A 1 9 ALA 9 32 32 ALA ALA A . n A 1 10 ASN 10 33 33 ASN ASN A . n A 1 11 THR 11 34 34 THR THR A . n A 1 12 VAL 12 35 35 VAL VAL A . n A 1 13 PRO 13 36 36 PRO PRO A . n A 1 14 TYR 14 37 37 TYR TYR A . n A 1 15 GLN 15 38 38 GLN GLN A . n A 1 16 VAL 16 39 39 VAL VAL A . n A 1 17 SER 17 40 40 SER SER A . n A 1 18 LEU 18 41 41 LEU LEU A . n A 1 19 ASN 19 42 42 ASN ASN A . n A 1 20 SER 20 43 43 SER SER A . n A 1 21 GLY 21 44 44 GLY GLY A . n A 1 22 TYR 22 45 45 TYR TYR A . n A 1 23 HIS 23 46 46 HIS HIS A . n A 1 24 PHE 24 47 47 PHE PHE A . n A 1 25 CYS 25 48 48 CYS CYS A . n A 1 26 GLY 26 49 49 GLY GLY A . n A 1 27 GLY 27 50 50 GLY GLY A . n A 1 28 SER 28 51 51 SER SER A . n A 1 29 LEU 29 52 52 LEU LEU A . n A 1 30 ILE 30 53 53 ILE ILE A . n A 1 31 ASN 31 54 54 ASN ASN A . n A 1 32 SER 32 55 55 SER SER A . n A 1 33 GLN 33 56 56 GLN GLN A . n A 1 34 TRP 34 57 57 TRP TRP A . n A 1 35 VAL 35 58 58 VAL VAL A . n A 1 36 VAL 36 59 59 VAL VAL A . n A 1 37 SER 37 60 60 SER SER A . n A 1 38 ALA 38 61 61 ALA ALA A . n A 1 39 ALA 39 62 62 ALA ALA A . n A 1 40 HIS 40 63 63 HIS HIS A . n A 1 41 CYS 41 64 64 CYS CYS A . n A 1 42 TYR 42 65 65 TYR TYR A . n A 1 43 LYS 43 66 66 LYS LYS A . n A 1 44 SER 44 67 67 SER SER A . n A 1 45 GLY 45 68 68 GLY GLY A . n A 1 46 ILE 46 69 69 ILE ILE A . n A 1 47 GLN 47 70 70 GLN GLN A . n A 1 48 VAL 48 71 71 VAL VAL A . n A 1 49 ARG 49 72 72 ARG ARG A . n A 1 50 LEU 50 73 73 LEU LEU A . n A 1 51 GLY 51 74 74 GLY GLY A . n A 1 52 GLU 52 75 75 GLU GLU A . n A 1 53 ASP 53 76 76 ASP ASP A . n A 1 54 ASN 54 77 77 ASN ASN A . n A 1 55 ILE 55 78 78 ILE ILE A . n A 1 56 ASN 56 79 79 ASN ASN A . n A 1 57 VAL 57 80 80 VAL VAL A . n A 1 58 VAL 58 81 81 VAL VAL A . n A 1 59 GLU 59 82 82 GLU GLU A . n A 1 60 GLY 60 83 83 GLY GLY A . n A 1 61 ASN 61 84 84 ASN ASN A . n A 1 62 GLU 62 85 85 GLU GLU A . n A 1 63 GLN 63 86 86 GLN GLN A . n A 1 64 PHE 64 87 87 PHE PHE A . n A 1 65 ILE 65 88 88 ILE ILE A . n A 1 66 SER 66 89 89 SER SER A . n A 1 67 ALA 67 90 90 ALA ALA A . n A 1 68 SER 68 91 91 SER SER A . n A 1 69 LYS 69 92 92 LYS LYS A . n A 1 70 SER 70 93 93 SER SER A . n A 1 71 ILE 71 94 94 ILE ILE A . n A 1 72 VAL 72 95 95 VAL VAL A . n A 1 73 HIS 73 96 96 HIS HIS A . n A 1 74 PRO 74 97 97 PRO PRO A . n A 1 75 SER 75 98 98 SER SER A . n A 1 76 TYR 76 99 99 TYR TYR A . n A 1 77 ASN 77 100 100 ASN ASN A . n A 1 78 SER 78 101 101 SER SER A . n A 1 79 ASN 79 102 102 ASN ASN A . n A 1 80 THR 80 103 103 THR THR A . n A 1 81 LEU 81 104 104 LEU LEU A . n A 1 82 ASN 82 105 105 ASN ASN A . n A 1 83 ASN 83 106 106 ASN ASN A . n A 1 84 ASP 84 107 107 ASP ASP A . n A 1 85 ILE 85 108 108 ILE ILE A . n A 1 86 MET 86 109 109 MET MET A . n A 1 87 LEU 87 110 110 LEU LEU A . n A 1 88 ILE 88 111 111 ILE ILE A . n A 1 89 LYS 89 112 112 LYS LYS A . n A 1 90 LEU 90 113 113 LEU LEU A . n A 1 91 LYS 91 114 114 LYS LYS A . n A 1 92 SER 92 115 115 SER SER A . n A 1 93 ALA 93 116 116 ALA ALA A . n A 1 94 ALA 94 117 117 ALA ALA A . n A 1 95 SER 95 118 118 SER SER A . n A 1 96 LEU 96 119 119 LEU LEU A . n A 1 97 ASN 97 120 120 ASN ASN A . n A 1 98 SER 98 121 121 SER SER A . n A 1 99 ARG 99 122 122 ARG ARG A . n A 1 100 VAL 100 123 123 VAL VAL A . n A 1 101 ALA 101 124 124 ALA ALA A . n A 1 102 SER 102 125 125 SER SER A . n A 1 103 ILE 103 126 126 ILE ILE A . n A 1 104 SER 104 127 127 SER SER A . n A 1 105 LEU 105 128 128 LEU LEU A . n A 1 106 PRO 106 129 129 PRO PRO A . n A 1 107 THR 107 130 130 THR THR A . n A 1 108 SER 108 131 131 SER SER A . n A 1 109 CYS 109 132 132 CYS CYS A . n A 1 110 ALA 110 133 133 ALA ALA A . n A 1 111 SER 111 134 134 SER SER A . n A 1 112 ALA 112 135 135 ALA ALA A . n A 1 113 GLY 113 136 136 GLY GLY A . n A 1 114 THR 114 137 137 THR THR A . n A 1 115 GLN 115 138 138 GLN GLN A . n A 1 116 CYS 116 139 139 CYS CYS A . n A 1 117 LEU 117 140 140 LEU LEU A . n A 1 118 ILE 118 141 141 ILE ILE A . n A 1 119 SER 119 142 142 SER SER A . n A 1 120 GLY 120 143 143 GLY GLY A . n A 1 121 TRP 121 144 144 TRP TRP A . n A 1 122 GLY 122 145 145 GLY GLY A . n A 1 123 ASN 123 146 146 ASN ASN A . n A 1 124 THR 124 147 147 THR THR A . n A 1 125 LYS 125 148 148 LYS LYS A . n A 1 126 SER 126 149 149 SER SER A . n A 1 127 SER 127 150 150 SER SER A . n A 1 128 GLY 128 151 151 GLY GLY A . n A 1 129 THR 129 152 152 THR THR A . n A 1 130 SER 130 153 153 SER SER A . n A 1 131 TYR 131 154 154 TYR TYR A . n A 1 132 PRO 132 155 155 PRO PRO A . n A 1 133 ASP 133 156 156 ASP ASP A . n A 1 134 VAL 134 157 157 VAL VAL A . n A 1 135 LEU 135 158 158 LEU LEU A . n A 1 136 LYS 136 159 159 LYS LYS A . n A 1 137 CYS 137 160 160 CYS CYS A . n A 1 138 LEU 138 161 161 LEU LEU A . n A 1 139 LYS 139 162 162 LYS LYS A . n A 1 140 ALA 140 163 163 ALA ALA A . n A 1 141 PRO 141 164 164 PRO PRO A . n A 1 142 ILE 142 165 165 ILE ILE A . n A 1 143 LEU 143 166 166 LEU LEU A . n A 1 144 SER 144 167 167 SER SER A . n A 1 145 ASP 145 168 168 ASP ASP A . n A 1 146 SER 146 169 169 SER SER A . n A 1 147 SER 147 170 170 SER SER A . n A 1 148 CYS 148 171 171 CYS CYS A . n A 1 149 LYS 149 172 172 LYS LYS A . n A 1 150 SER 150 173 173 SER SER A . n A 1 151 ALA 151 174 174 ALA ALA A . n A 1 152 TYR 152 175 175 TYR TYR A . n A 1 153 PRO 153 176 176 PRO PRO A . n A 1 154 GLY 154 177 177 GLY GLY A . n A 1 155 GLN 155 178 178 GLN GLN A . n A 1 156 ILE 156 179 179 ILE ILE A . n A 1 157 THR 157 180 180 THR THR A . n A 1 158 SER 158 181 181 SER SER A . n A 1 159 ASN 159 182 182 ASN ASN A . n A 1 160 MET 160 183 183 MET MET A . n A 1 161 PHE 161 184 184 PHE PHE A . n A 1 162 CYS 162 185 185 CYS CYS A . n A 1 163 ALA 163 186 186 ALA ALA A . n A 1 164 GLY 164 187 187 GLY GLY A . n A 1 165 TYR 165 188 188 TYR TYR A . n A 1 166 LEU 166 189 189 LEU LEU A . n A 1 167 GLU 167 190 190 GLU GLU A . n A 1 168 GLY 168 191 191 GLY GLY A . n A 1 169 GLY 169 192 192 GLY GLY A . n A 1 170 LYS 170 193 193 LYS LYS A . n A 1 171 ASP 171 194 194 ASP ASP A . n A 1 172 SER 172 195 195 SER SER A . n A 1 173 CYS 173 196 196 CYS CYS A . n A 1 174 GLN 174 197 197 GLN GLN A . n A 1 175 GLY 175 198 198 GLY GLY A . n A 1 176 ASP 176 199 199 ASP ASP A . n A 1 177 SER 177 200 200 SER SER A . n A 1 178 GLY 178 201 201 GLY GLY A . n A 1 179 GLY 179 202 202 GLY GLY A . n A 1 180 PRO 180 203 203 PRO PRO A . n A 1 181 VAL 181 204 204 VAL VAL A . n A 1 182 VAL 182 205 205 VAL VAL A . n A 1 183 CYS 183 206 206 CYS CYS A . n A 1 184 SER 184 207 207 SER SER A . n A 1 185 GLY 185 208 208 GLY GLY A . n A 1 186 LYS 186 209 209 LYS LYS A . n A 1 187 LEU 187 210 210 LEU LEU A . n A 1 188 GLN 188 211 211 GLN GLN A . n A 1 189 GLY 189 212 212 GLY GLY A . n A 1 190 ILE 190 213 213 ILE ILE A . n A 1 191 VAL 191 214 214 VAL VAL A . n A 1 192 SER 192 215 215 SER SER A . n A 1 193 TRP 193 216 216 TRP TRP A . n A 1 194 GLY 194 217 217 GLY GLY A . n A 1 195 SER 195 218 218 SER SER A . n A 1 196 GLY 196 219 219 GLY GLY A . n A 1 197 CYS 197 220 220 CYS CYS A . n A 1 198 ALA 198 221 221 ALA ALA A . n A 1 199 GLN 199 222 222 GLN GLN A . n A 1 200 LYS 200 223 223 LYS LYS A . n A 1 201 ASN 201 224 224 ASN ASN A . n A 1 202 LYS 202 225 225 LYS LYS A . n A 1 203 PRO 203 226 226 PRO PRO A . n A 1 204 GLY 204 227 227 GLY GLY A . n A 1 205 VAL 205 228 228 VAL VAL A . n A 1 206 TYR 206 229 229 TYR TYR A . n A 1 207 THR 207 230 230 THR THR A . n A 1 208 LYS 208 231 231 LYS LYS A . n A 1 209 VAL 209 232 232 VAL VAL A . n A 1 210 CYS 210 233 233 CYS CYS A . n A 1 211 ASN 211 234 234 ASN ASN A . n A 1 212 TYR 212 235 235 TYR TYR A . n A 1 213 VAL 213 236 236 VAL VAL A . n A 1 214 SER 214 237 237 SER SER A . n A 1 215 TRP 215 238 238 TRP TRP A . n A 1 216 ILE 216 239 239 ILE ILE A . n A 1 217 LYS 217 240 240 LYS LYS A . n A 1 218 GLN 218 241 241 GLN GLN A . n A 1 219 THR 219 242 242 THR THR A . n A 1 220 ILE 220 243 243 ILE ILE A . n A 1 221 ALA 221 244 244 ALA ALA A . n A 1 222 SER 222 245 245 SER SER A . n A 1 223 ASN 223 246 246 ASN ASN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 301 1 CA CA A . C 2 CA 1 302 2 CA CA A . D 3 HOH 1 401 81 HOH HOH A . D 3 HOH 2 402 124 HOH HOH A . D 3 HOH 3 403 132 HOH HOH A . D 3 HOH 4 404 129 HOH HOH A . D 3 HOH 5 405 62 HOH HOH A . D 3 HOH 6 406 166 HOH HOH A . D 3 HOH 7 407 131 HOH HOH A . D 3 HOH 8 408 8 HOH HOH A . D 3 HOH 9 409 49 HOH HOH A . D 3 HOH 10 410 74 HOH HOH A . D 3 HOH 11 411 122 HOH HOH A . D 3 HOH 12 412 93 HOH HOH A . D 3 HOH 13 413 91 HOH HOH A . D 3 HOH 14 414 126 HOH HOH A . D 3 HOH 15 415 15 HOH HOH A . D 3 HOH 16 416 61 HOH HOH A . D 3 HOH 17 417 4 HOH HOH A . D 3 HOH 18 418 136 HOH HOH A . D 3 HOH 19 419 10 HOH HOH A . D 3 HOH 20 420 149 HOH HOH A . D 3 HOH 21 421 108 HOH HOH A . D 3 HOH 22 422 175 HOH HOH A . D 3 HOH 23 423 5 HOH HOH A . D 3 HOH 24 424 164 HOH HOH A . D 3 HOH 25 425 85 HOH HOH A . D 3 HOH 26 426 23 HOH HOH A . D 3 HOH 27 427 88 HOH HOH A . D 3 HOH 28 428 141 HOH HOH A . D 3 HOH 29 429 28 HOH HOH A . D 3 HOH 30 430 111 HOH HOH A . D 3 HOH 31 431 2 HOH HOH A . D 3 HOH 32 432 127 HOH HOH A . D 3 HOH 33 433 19 HOH HOH A . D 3 HOH 34 434 128 HOH HOH A . D 3 HOH 35 435 144 HOH HOH A . D 3 HOH 36 436 92 HOH HOH A . D 3 HOH 37 437 101 HOH HOH A . D 3 HOH 38 438 38 HOH HOH A . D 3 HOH 39 439 78 HOH HOH A . D 3 HOH 40 440 130 HOH HOH A . D 3 HOH 41 441 47 HOH HOH A . D 3 HOH 42 442 151 HOH HOH A . D 3 HOH 43 443 6 HOH HOH A . D 3 HOH 44 444 63 HOH HOH A . D 3 HOH 45 445 39 HOH HOH A . D 3 HOH 46 446 172 HOH HOH A . D 3 HOH 47 447 50 HOH HOH A . D 3 HOH 48 448 89 HOH HOH A . D 3 HOH 49 449 167 HOH HOH A . D 3 HOH 50 450 157 HOH HOH A . D 3 HOH 51 451 16 HOH HOH A . D 3 HOH 52 452 159 HOH HOH A . D 3 HOH 53 453 109 HOH HOH A . D 3 HOH 54 454 115 HOH HOH A . D 3 HOH 55 455 12 HOH HOH A . D 3 HOH 56 456 37 HOH HOH A . D 3 HOH 57 457 195 HOH HOH A . D 3 HOH 58 458 41 HOH HOH A . D 3 HOH 59 459 77 HOH HOH A . D 3 HOH 60 460 137 HOH HOH A . D 3 HOH 61 461 143 HOH HOH A . D 3 HOH 62 462 83 HOH HOH A . D 3 HOH 63 463 182 HOH HOH A . D 3 HOH 64 464 18 HOH HOH A . D 3 HOH 65 465 193 HOH HOH A . D 3 HOH 66 466 66 HOH HOH A . D 3 HOH 67 467 17 HOH HOH A . D 3 HOH 68 468 75 HOH HOH A . D 3 HOH 69 469 113 HOH HOH A . D 3 HOH 70 470 176 HOH HOH A . D 3 HOH 71 471 102 HOH HOH A . D 3 HOH 72 472 7 HOH HOH A . D 3 HOH 73 473 35 HOH HOH A . D 3 HOH 74 474 22 HOH HOH A . D 3 HOH 75 475 64 HOH HOH A . D 3 HOH 76 476 104 HOH HOH A . D 3 HOH 77 477 180 HOH HOH A . D 3 HOH 78 478 133 HOH HOH A . D 3 HOH 79 479 105 HOH HOH A . D 3 HOH 80 480 34 HOH HOH A . D 3 HOH 81 481 106 HOH HOH A . D 3 HOH 82 482 20 HOH HOH A . D 3 HOH 83 483 82 HOH HOH A . D 3 HOH 84 484 71 HOH HOH A . D 3 HOH 85 485 184 HOH HOH A . D 3 HOH 86 486 96 HOH HOH A . D 3 HOH 87 487 40 HOH HOH A . D 3 HOH 88 488 3 HOH HOH A . D 3 HOH 89 489 42 HOH HOH A . D 3 HOH 90 490 99 HOH HOH A . D 3 HOH 91 491 179 HOH HOH A . D 3 HOH 92 492 119 HOH HOH A . D 3 HOH 93 493 134 HOH HOH A . D 3 HOH 94 494 70 HOH HOH A . D 3 HOH 95 495 53 HOH HOH A . D 3 HOH 96 496 171 HOH HOH A . D 3 HOH 97 497 148 HOH HOH A . D 3 HOH 98 498 118 HOH HOH A . D 3 HOH 99 499 147 HOH HOH A . D 3 HOH 100 500 155 HOH HOH A . D 3 HOH 101 501 194 HOH HOH A . D 3 HOH 102 502 43 HOH HOH A . D 3 HOH 103 503 48 HOH HOH A . D 3 HOH 104 504 162 HOH HOH A . D 3 HOH 105 505 181 HOH HOH A . D 3 HOH 106 506 192 HOH HOH A . D 3 HOH 107 507 27 HOH HOH A . D 3 HOH 108 508 140 HOH HOH A . D 3 HOH 109 509 87 HOH HOH A . D 3 HOH 110 510 94 HOH HOH A . D 3 HOH 111 511 31 HOH HOH A . D 3 HOH 112 512 14 HOH HOH A . D 3 HOH 113 513 153 HOH HOH A . D 3 HOH 114 514 69 HOH HOH A . D 3 HOH 115 515 168 HOH HOH A . D 3 HOH 116 516 90 HOH HOH A . D 3 HOH 117 517 72 HOH HOH A . D 3 HOH 118 518 45 HOH HOH A . D 3 HOH 119 519 33 HOH HOH A . D 3 HOH 120 520 60 HOH HOH A . D 3 HOH 121 521 29 HOH HOH A . D 3 HOH 122 522 120 HOH HOH A . D 3 HOH 123 523 100 HOH HOH A . D 3 HOH 124 524 25 HOH HOH A . D 3 HOH 125 525 84 HOH HOH A . D 3 HOH 126 526 59 HOH HOH A . D 3 HOH 127 527 36 HOH HOH A . D 3 HOH 128 528 24 HOH HOH A . D 3 HOH 129 529 154 HOH HOH A . D 3 HOH 130 530 13 HOH HOH A . D 3 HOH 131 531 86 HOH HOH A . D 3 HOH 132 532 26 HOH HOH A . D 3 HOH 133 533 145 HOH HOH A . D 3 HOH 134 534 152 HOH HOH A . D 3 HOH 135 535 117 HOH HOH A . D 3 HOH 136 536 51 HOH HOH A . D 3 HOH 137 537 165 HOH HOH A . D 3 HOH 138 538 139 HOH HOH A . D 3 HOH 139 539 185 HOH HOH A . D 3 HOH 140 540 76 HOH HOH A . D 3 HOH 141 541 98 HOH HOH A . D 3 HOH 142 542 95 HOH HOH A . D 3 HOH 143 543 32 HOH HOH A . D 3 HOH 144 544 135 HOH HOH A . D 3 HOH 145 545 116 HOH HOH A . D 3 HOH 146 546 46 HOH HOH A . D 3 HOH 147 547 9 HOH HOH A . D 3 HOH 148 548 21 HOH HOH A . D 3 HOH 149 549 97 HOH HOH A . D 3 HOH 150 550 79 HOH HOH A . D 3 HOH 151 551 107 HOH HOH A . D 3 HOH 152 552 65 HOH HOH A . D 3 HOH 153 553 190 HOH HOH A . D 3 HOH 154 554 11 HOH HOH A . D 3 HOH 155 555 54 HOH HOH A . D 3 HOH 156 556 103 HOH HOH A . D 3 HOH 157 557 187 HOH HOH A . D 3 HOH 158 558 68 HOH HOH A . D 3 HOH 159 559 114 HOH HOH A . D 3 HOH 160 560 110 HOH HOH A . D 3 HOH 161 561 58 HOH HOH A . D 3 HOH 162 562 156 HOH HOH A . D 3 HOH 163 563 161 HOH HOH A . D 3 HOH 164 564 158 HOH HOH A . D 3 HOH 165 565 67 HOH HOH A . D 3 HOH 166 566 188 HOH HOH A . D 3 HOH 167 567 146 HOH HOH A . D 3 HOH 168 568 44 HOH HOH A . D 3 HOH 169 569 1 HOH HOH A . D 3 HOH 170 570 189 HOH HOH A . D 3 HOH 171 571 169 HOH HOH A . D 3 HOH 172 572 52 HOH HOH A . D 3 HOH 173 573 55 HOH HOH A . D 3 HOH 174 574 177 HOH HOH A . D 3 HOH 175 575 178 HOH HOH A . D 3 HOH 176 576 57 HOH HOH A . D 3 HOH 177 577 121 HOH HOH A . D 3 HOH 178 578 142 HOH HOH A . D 3 HOH 179 579 125 HOH HOH A . D 3 HOH 180 580 56 HOH HOH A . D 3 HOH 181 581 160 HOH HOH A . D 3 HOH 182 582 30 HOH HOH A . D 3 HOH 183 583 183 HOH HOH A . D 3 HOH 184 584 150 HOH HOH A . D 3 HOH 185 585 112 HOH HOH A . D 3 HOH 186 586 80 HOH HOH A . D 3 HOH 187 587 123 HOH HOH A . D 3 HOH 188 588 186 HOH HOH A . D 3 HOH 189 589 163 HOH HOH A . D 3 HOH 190 590 138 HOH HOH A . D 3 HOH 191 591 173 HOH HOH A . D 3 HOH 192 592 174 HOH HOH A . D 3 HOH 193 593 73 HOH HOH A . D 3 HOH 194 594 170 HOH HOH A . D 3 HOH 195 595 191 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 170 ? 1 MORE -21 ? 1 'SSA (A^2)' 8620 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 52 ? A GLU 75 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? A ASN 54 ? A ASN 77 ? 1_555 89.4 ? 2 OE1 ? A GLU 52 ? A GLU 75 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? A VAL 57 ? A VAL 80 ? 1_555 153.1 ? 3 O ? A ASN 54 ? A ASN 77 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? A VAL 57 ? A VAL 80 ? 1_555 75.4 ? 4 OE1 ? A GLU 52 ? A GLU 75 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OE1 ? A GLU 59 ? A GLU 82 ? 1_555 113.0 ? 5 O ? A ASN 54 ? A ASN 77 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OE1 ? A GLU 59 ? A GLU 82 ? 1_555 83.2 ? 6 O ? A VAL 57 ? A VAL 80 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OE1 ? A GLU 59 ? A GLU 82 ? 1_555 87.5 ? 7 OE1 ? A GLU 52 ? A GLU 75 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OE2 ? A GLU 62 ? A GLU 85 ? 1_555 112.6 ? 8 O ? A ASN 54 ? A ASN 77 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OE2 ? A GLU 62 ? A GLU 85 ? 1_555 155.1 ? 9 O ? A VAL 57 ? A VAL 80 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OE2 ? A GLU 62 ? A GLU 85 ? 1_555 87.9 ? 10 OE1 ? A GLU 59 ? A GLU 82 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OE2 ? A GLU 62 ? A GLU 85 ? 1_555 77.5 ? 11 OE1 ? A GLU 52 ? A GLU 75 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? D HOH . ? A HOH 527 ? 1_555 75.6 ? 12 O ? A ASN 54 ? A ASN 77 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? D HOH . ? A HOH 527 ? 1_555 98.8 ? 13 O ? A VAL 57 ? A VAL 80 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? D HOH . ? A HOH 527 ? 1_555 84.8 ? 14 OE1 ? A GLU 59 ? A GLU 82 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? D HOH . ? A HOH 527 ? 1_555 171.2 ? 15 OE2 ? A GLU 62 ? A GLU 85 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? D HOH . ? A HOH 527 ? 1_555 98.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-04-05 2 'Structure model' 1 1 2017-04-12 3 'Structure model' 1 2 2018-07-18 4 'Structure model' 1 3 2018-08-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' em_software 2 4 'Structure model' pdbx_related_exp_data_set # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_em_software.name' 2 4 'Structure model' '_pdbx_related_exp_data_set.data_reference' # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version '(1.10_2155: ???)' _software.pdbx_ordinal 1 # _em_3d_fitting.entry_id 5K7R _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol OTHER _em_3d_fitting.ref_space RECIPROCAL _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.details ? _em_3d_fitting_list.pdb_chain_id A _em_3d_fitting_list.pdb_chain_residue_range 16-245 _em_3d_fitting_list.pdb_entry_id 2PTN # _em_3d_reconstruction.entry_id 5K7R _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles ? _em_3d_reconstruction.resolution 1.70 _em_3d_reconstruction.resolution_method 'DIFFRACTION PATTERN/LAYERLINES' _em_3d_reconstruction.symmetry_type '3D CRYSTAL' _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.euler_angles_details ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 6.5 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name Trypsin _em_entity_assembly.source NATURAL _em_entity_assembly.type 'ORGANELLE OR CELLULAR COMPONENT' _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 5K7R _em_image_scans.id 1 _em_image_scans.dimension_height 2048 _em_image_scans.dimension_width 2048 _em_image_scans.frames_per_image ? _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size 0.0311999992 _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image ? _em_image_scans.number_digital_images ? _em_image_scans.details ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.citation_id ? # _em_imaging.id 1 _em_imaging.entry_id 5K7R _em_imaging.accelerating_voltage 200 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen NITROGEN _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TECNAI F20' _em_imaging.mode DIFFRACTION _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max ? _em_imaging.nominal_defocus_min ? _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.date 2016-03-11 _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.specimen_holder_type ? _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.citation_id ? _em_imaging.detector_distance ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.entry_id 5K7R _em_vitrification.temp ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? # _em_experiment.entry_id 5K7R _em_experiment.id 1 _em_experiment.aggregation_state '3D ARRAY' _em_experiment.reconstruction_method CRYSTALLOGRAPHY _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 463 ? ? O A HOH 573 ? ? 2.15 2 1 O A ILE 243 ? ? O A HOH 401 ? ? 2.15 3 1 O A HOH 436 ? ? O A HOH 497 ? ? 2.15 4 1 OE2 A GLU 82 ? ? O A HOH 402 ? ? 2.16 5 1 O A HOH 489 ? ? O A HOH 572 ? ? 2.16 6 1 O A HOH 406 ? ? O A HOH 442 ? ? 2.17 7 1 O A HOH 560 ? ? O A HOH 569 ? ? 2.18 8 1 O A HOH 484 ? ? O A HOH 543 ? ? 2.18 9 1 OD1 A ASP 76 ? ? O A HOH 403 ? ? 2.19 10 1 OH A TYR 65 ? ? O A HOH 404 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 577 ? ? 1_555 O A HOH 589 ? ? 2_444 2.14 2 1 O A HOH 576 ? ? 1_555 O A HOH 577 ? ? 2_445 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 35 ? ? -115.65 77.64 2 1 ASP A 76 ? ? -112.50 -81.31 3 1 LEU A 104 ? ? 59.41 19.36 # _em_3d_crystal_entity.id 1 _em_3d_crystal_entity.image_processing_id 1 _em_3d_crystal_entity.angle_alpha 90 _em_3d_crystal_entity.angle_beta 90 _em_3d_crystal_entity.angle_gamma 90 _em_3d_crystal_entity.length_a 53.12 _em_3d_crystal_entity.length_b 56.08 _em_3d_crystal_entity.length_c 64.38 _em_3d_crystal_entity.space_group_name 'P 21 21 21' _em_3d_crystal_entity.space_group_num 19 # loop_ _em_buffer_component.buffer_id _em_buffer_component.id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.name 1 1 10 mg/ml ? benzamidine 1 2 3 mM CaCl 'calcium chloride' # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type NONE _em_ctf_correction.details ? # _em_diffraction.id 1 _em_diffraction.camera_length 1500 _em_diffraction.imaging_id 1 _em_diffraction.tilt_angle_list ? # _em_diffraction_shell.id 1 _em_diffraction_shell.em_diffraction_stats_id 1 _em_diffraction_shell.fourier_space_coverage 56.2 _em_diffraction_shell.high_resolution 1.70 _em_diffraction_shell.low_resolution 1.79 _em_diffraction_shell.multiplicity 3.1 _em_diffraction_shell.num_structure_factors 1737 _em_diffraction_shell.phase_residual 60.7 # _em_diffraction_stats.id 1 _em_diffraction_stats.details ? _em_diffraction_stats.image_processing_id 1 _em_diffraction_stats.fourier_space_coverage 73.8 _em_diffraction_stats.high_resolution 1.50 _em_diffraction_stats.num_intensities_measured 145833 _em_diffraction_stats.num_structure_factors 23542 _em_diffraction_stats.overall_phase_error 28.86 _em_diffraction_stats.overall_phase_residual 40.4 _em_diffraction_stats.phase_error_rejection_criteria 0 _em_diffraction_stats.r_merge 0.773 _em_diffraction_stats.r_sym 0.773 # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.023354 # _em_entity_assembly_naturalsource.id 1 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 9913 _em_entity_assembly_naturalsource.organ . _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Bos taurus' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 0.004 _em_image_recording.average_exposure_time 4.1 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'TVIPS TEMCAM-F416 (4k x 4k)' _em_image_recording.num_diffraction_images 1527 _em_image_recording.num_grids_imaged 3 _em_image_recording.num_real_images 1527 # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'IMAGE ACQUISITION' ? EM-Menu 4.0.9.75 ? ? 1 2 MASKING ? ? ? ? ? ? 3 'CTF CORRECTION' ? ? ? 1 ? ? 4 'LAYERLINE INDEXING' ? ? ? ? ? ? 5 'DIFFRACTION INDEXING' ? iMosflm/MOSFLM 7.2.1 ? ? ? 6 'MODEL FITTING' ? MOLREP 11.4.05 ? 1 ? 7 OTHER ? ? ? ? ? ? 8 'MODEL REFINEMENT' ? PHENIX 1.10_2155 ? 1 ? 9 'MOLECULAR REPLACEMENT' 'Starting model PDB ID 2ptn' MOLREP 11.4.05 1 ? ? 10 'LATTICE DISTORTION CORRECTION' ? ? ? 1 ? ? 11 'SYMMETRY DETERMINATION' ? POINTLESS 1.10.21 1 ? ? 12 'CRYSTALLOGRAPHY MERGING' ? AIMLESS 0.5.25 1 ? ? 13 RECONSTRUCTION ? ? ? 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 water HOH # _pdbx_related_exp_data_set.data_reference 10.15785/SBGRID/288 _pdbx_related_exp_data_set.data_set_type 'diffraction image data' _pdbx_related_exp_data_set.details 'SB Data Grid' _pdbx_related_exp_data_set.metadata_reference ? _pdbx_related_exp_data_set.ordinal 1 #