HEADER HYDROLASE 27-MAY-16 5K82 TITLE CRYSTAL STRUCTURE OF A PRIMATE APOBEC3G N-TERMINAL DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: APOLIPOPROTEIN B MRNA EDITING ENZYME, CATALYTIC PEPTIDE- COMPND 3 LIKE 3G,APOLIPOPROTEIN B MRNA EDITING ENZYME, CATALYTIC PEPTIDE-LIKE COMPND 4 3G; COMPND 5 CHAIN: A, B, C, D; COMPND 6 FRAGMENT: UNP RESIDUES 1-195 (139CQKRDGPH146 REPLACED BY AEAG); COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MACACA MULATTA; SOURCE 3 ORGANISM_COMMON: RHESUS MACAQUE; SOURCE 4 ORGANISM_TAXID: 9544; SOURCE 5 GENE: APOBEC3G; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PGEX6P-1 KEYWDS APOBEC3G, VIF, HIV, APOBEC, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR X.XIAO,S.-X.LI,H.YANG,X.S.CHEN REVDAT 4 27-SEP-23 5K82 1 REMARK REVDAT 3 13-APR-22 5K82 1 REMARK REVDAT 2 13-SEP-17 5K82 1 REMARK REVDAT 1 10-AUG-16 5K82 0 JRNL AUTH X.XIAO,S.X.LI,H.YANG,X.S.CHEN JRNL TITL CRYSTAL STRUCTURES OF APOBEC3G N-DOMAIN ALONE AND ITS JRNL TITL 2 COMPLEX WITH DNA. JRNL REF NAT COMMUN V. 7 12193 2016 JRNL REFN ESSN 2041-1723 JRNL PMID 27480941 JRNL DOI 10.1038/NCOMMS12193 REMARK 2 REMARK 2 RESOLUTION. 2.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 44596 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.480 REMARK 3 FREE R VALUE TEST SET COUNT : 1997 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.2999 - 7.0103 0.99 3086 144 0.1652 0.1706 REMARK 3 2 7.0103 - 5.5683 1.00 3092 143 0.2095 0.2133 REMARK 3 3 5.5683 - 4.8656 1.00 3124 145 0.1979 0.2056 REMARK 3 4 4.8656 - 4.4212 1.00 3027 154 0.1732 0.2010 REMARK 3 5 4.4212 - 4.1046 1.00 3092 148 0.2170 0.2597 REMARK 3 6 4.1046 - 3.8628 1.00 3105 148 0.2411 0.2834 REMARK 3 7 3.8628 - 3.6695 1.00 3084 138 0.2603 0.3106 REMARK 3 8 3.6695 - 3.5098 0.99 3054 135 0.2568 0.3093 REMARK 3 9 3.5098 - 3.3748 1.00 3093 150 0.2765 0.3071 REMARK 3 10 3.3748 - 3.2583 1.00 3121 138 0.2804 0.3039 REMARK 3 11 3.2583 - 3.1565 1.00 3098 144 0.2890 0.3585 REMARK 3 12 3.1565 - 3.0663 0.99 3002 146 0.3283 0.4662 REMARK 3 13 3.0663 - 2.9856 0.97 2993 145 0.3524 0.4033 REMARK 3 14 2.9856 - 2.9128 0.85 2628 119 0.3722 0.4014 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.010 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 6559 REMARK 3 ANGLE : 1.658 8913 REMARK 3 CHIRALITY : 0.081 907 REMARK 3 PLANARITY : 0.011 1126 REMARK 3 DIHEDRAL : 13.338 2423 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5K82 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1000221661. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99997 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44596 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 42.295 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.11600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.67700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5K81 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 78.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.9 M AMSO4, 0.1M TRIS PH 8.0, 0.5 M REMARK 280 NDSB-195, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.18533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 26.59267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 ALA A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 PRO A 3 REMARK 465 GLY B -4 REMARK 465 PRO B -3 REMARK 465 ALA B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 PRO B 3 REMARK 465 GLY C -4 REMARK 465 PRO C -3 REMARK 465 ALA C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 LYS C 2 REMARK 465 PRO C 3 REMARK 465 GLY D -4 REMARK 465 PRO D -3 REMARK 465 ALA D -2 REMARK 465 GLY D -1 REMARK 465 SER D 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG D 78 OD2 ASP D 111 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO C 44 CD PRO C 44 N 0.265 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 29 N - CA - C ANGL. DEV. = -18.4 DEGREES REMARK 500 ALA A 145 CB - CA - C ANGL. DEV. = -19.6 DEGREES REMARK 500 GLY A 146 N - CA - C ANGL. DEV. = 20.0 DEGREES REMARK 500 SER B 45 CB - CA - C ANGL. DEV. = -19.0 DEGREES REMARK 500 SER B 45 N - CA - C ANGL. DEV. = 38.1 DEGREES REMARK 500 PRO B 47 C - N - CD ANGL. DEV. = 13.7 DEGREES REMARK 500 ASP C 43 CB - CA - C ANGL. DEV. = 17.2 DEGREES REMARK 500 ASP C 43 N - CA - C ANGL. DEV. = -16.4 DEGREES REMARK 500 PRO C 44 C - N - CD ANGL. DEV. = -31.6 DEGREES REMARK 500 PRO C 44 CA - N - CD ANGL. DEV. = -12.5 DEGREES REMARK 500 PRO C 44 N - CA - CB ANGL. DEV. = 11.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 38 113.58 -160.89 REMARK 500 TYR A 91 79.82 -116.91 REMARK 500 ALA A 145 23.53 45.66 REMARK 500 ASP A 166 77.40 -65.65 REMARK 500 SER B 28 39.90 -144.52 REMARK 500 GLU B 38 116.38 -164.82 REMARK 500 ASP B 166 71.14 -68.47 REMARK 500 ILE C 5 -5.47 -59.74 REMARK 500 GLU C 38 115.91 -164.88 REMARK 500 LYS C 42 89.10 -68.18 REMARK 500 ASP C 43 158.71 177.15 REMARK 500 GLU D 38 113.50 -162.09 REMARK 500 TYR D 91 79.69 -117.10 REMARK 500 ASP D 166 75.38 -67.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 65 ND1 REMARK 620 2 CYS A 97 SG 123.0 REMARK 620 3 CYS A 100 SG 128.9 89.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 65 ND1 REMARK 620 2 CYS B 97 SG 117.9 REMARK 620 3 CYS B 100 SG 102.3 80.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 65 ND1 REMARK 620 2 CYS C 97 SG 118.4 REMARK 620 3 CYS C 100 SG 105.0 87.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 65 ND1 REMARK 620 2 CYS D 97 SG 123.5 REMARK 620 3 CYS D 100 SG 136.7 91.3 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5K81 RELATED DB: PDB REMARK 900 RELATED ID: 5K83 RELATED DB: PDB DBREF 5K82 A 1 138 UNP M1GSK9 M1GSK9_MACMU 1 138 DBREF 5K82 A 147 195 UNP M1GSK9 M1GSK9_MACMU 147 195 DBREF 5K82 B 1 138 UNP M1GSK9 M1GSK9_MACMU 1 138 DBREF 5K82 B 147 195 UNP M1GSK9 M1GSK9_MACMU 147 195 DBREF 5K82 C 1 138 UNP M1GSK9 M1GSK9_MACMU 1 138 DBREF 5K82 C 147 195 UNP M1GSK9 M1GSK9_MACMU 147 195 DBREF 5K82 D 1 138 UNP M1GSK9 M1GSK9_MACMU 1 138 DBREF 5K82 D 147 195 UNP M1GSK9 M1GSK9_MACMU 147 195 SEQADV 5K82 GLY A -4 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 PRO A -3 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 ALA A -2 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 GLY A -1 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 SER A 0 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 ALA A 143 UNP M1GSK9 LINKER SEQADV 5K82 GLU A 144 UNP M1GSK9 LINKER SEQADV 5K82 ALA A 145 UNP M1GSK9 LINKER SEQADV 5K82 GLY A 146 UNP M1GSK9 LINKER SEQADV 5K82 GLY B -4 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 PRO B -3 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 ALA B -2 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 GLY B -1 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 SER B 0 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 ALA B 143 UNP M1GSK9 LINKER SEQADV 5K82 GLU B 144 UNP M1GSK9 LINKER SEQADV 5K82 ALA B 145 UNP M1GSK9 LINKER SEQADV 5K82 GLY B 146 UNP M1GSK9 LINKER SEQADV 5K82 GLY C -4 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 PRO C -3 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 ALA C -2 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 GLY C -1 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 SER C 0 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 ALA C 143 UNP M1GSK9 LINKER SEQADV 5K82 GLU C 144 UNP M1GSK9 LINKER SEQADV 5K82 ALA C 145 UNP M1GSK9 LINKER SEQADV 5K82 GLY C 146 UNP M1GSK9 LINKER SEQADV 5K82 GLY D -4 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 PRO D -3 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 ALA D -2 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 GLY D -1 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 SER D 0 UNP M1GSK9 EXPRESSION TAG SEQADV 5K82 ALA D 143 UNP M1GSK9 LINKER SEQADV 5K82 GLU D 144 UNP M1GSK9 LINKER SEQADV 5K82 ALA D 145 UNP M1GSK9 LINKER SEQADV 5K82 GLY D 146 UNP M1GSK9 LINKER SEQRES 1 A 196 GLY PRO ALA GLY SER MET LYS PRO GLN ILE ARG ASN MET SEQRES 2 A 196 VAL GLU PRO MET ASP PRO ARG THR PHE VAL SER ASN PHE SEQRES 3 A 196 ASN ASN ARG PRO ILE LEU SER GLY LEU ASP THR VAL TRP SEQRES 4 A 196 LEU CYS CYS GLU VAL LYS THR LYS ASP PRO SER GLY PRO SEQRES 5 A 196 PRO LEU ASP ALA LYS ILE PHE GLN GLY LYS VAL TYR PRO SEQRES 6 A 196 LYS ALA LYS TYR HIS PRO GLU MET ARG PHE LEU ARG TRP SEQRES 7 A 196 PHE HIS LYS TRP ARG GLN LEU HIS HIS ASP GLN GLU TYR SEQRES 8 A 196 LYS VAL THR TRP TYR VAL SER TRP SER PRO CYS THR ARG SEQRES 9 A 196 CYS ALA ASN SER VAL ALA THR PHE LEU ALA LYS ASP PRO SEQRES 10 A 196 LYS VAL THR LEU THR ILE PHE VAL ALA ARG LEU TYR TYR SEQRES 11 A 196 PHE TRP LYS PRO ASP TYR GLN GLN ALA LEU ARG ILE LEU SEQRES 12 A 196 ALA GLU ALA GLY ALA THR MET LYS ILE MET ASN TYR ASN SEQRES 13 A 196 GLU PHE GLN ASP CYS TRP ASN LYS PHE VAL ASP GLY ARG SEQRES 14 A 196 GLY LYS PRO PHE LYS PRO TRP ASN ASN LEU PRO LYS HIS SEQRES 15 A 196 TYR THR LEU LEU GLN ALA THR LEU GLY GLU LEU LEU ARG SEQRES 16 A 196 HIS SEQRES 1 B 196 GLY PRO ALA GLY SER MET LYS PRO GLN ILE ARG ASN MET SEQRES 2 B 196 VAL GLU PRO MET ASP PRO ARG THR PHE VAL SER ASN PHE SEQRES 3 B 196 ASN ASN ARG PRO ILE LEU SER GLY LEU ASP THR VAL TRP SEQRES 4 B 196 LEU CYS CYS GLU VAL LYS THR LYS ASP PRO SER GLY PRO SEQRES 5 B 196 PRO LEU ASP ALA LYS ILE PHE GLN GLY LYS VAL TYR PRO SEQRES 6 B 196 LYS ALA LYS TYR HIS PRO GLU MET ARG PHE LEU ARG TRP SEQRES 7 B 196 PHE HIS LYS TRP ARG GLN LEU HIS HIS ASP GLN GLU TYR SEQRES 8 B 196 LYS VAL THR TRP TYR VAL SER TRP SER PRO CYS THR ARG SEQRES 9 B 196 CYS ALA ASN SER VAL ALA THR PHE LEU ALA LYS ASP PRO SEQRES 10 B 196 LYS VAL THR LEU THR ILE PHE VAL ALA ARG LEU TYR TYR SEQRES 11 B 196 PHE TRP LYS PRO ASP TYR GLN GLN ALA LEU ARG ILE LEU SEQRES 12 B 196 ALA GLU ALA GLY ALA THR MET LYS ILE MET ASN TYR ASN SEQRES 13 B 196 GLU PHE GLN ASP CYS TRP ASN LYS PHE VAL ASP GLY ARG SEQRES 14 B 196 GLY LYS PRO PHE LYS PRO TRP ASN ASN LEU PRO LYS HIS SEQRES 15 B 196 TYR THR LEU LEU GLN ALA THR LEU GLY GLU LEU LEU ARG SEQRES 16 B 196 HIS SEQRES 1 C 196 GLY PRO ALA GLY SER MET LYS PRO GLN ILE ARG ASN MET SEQRES 2 C 196 VAL GLU PRO MET ASP PRO ARG THR PHE VAL SER ASN PHE SEQRES 3 C 196 ASN ASN ARG PRO ILE LEU SER GLY LEU ASP THR VAL TRP SEQRES 4 C 196 LEU CYS CYS GLU VAL LYS THR LYS ASP PRO SER GLY PRO SEQRES 5 C 196 PRO LEU ASP ALA LYS ILE PHE GLN GLY LYS VAL TYR PRO SEQRES 6 C 196 LYS ALA LYS TYR HIS PRO GLU MET ARG PHE LEU ARG TRP SEQRES 7 C 196 PHE HIS LYS TRP ARG GLN LEU HIS HIS ASP GLN GLU TYR SEQRES 8 C 196 LYS VAL THR TRP TYR VAL SER TRP SER PRO CYS THR ARG SEQRES 9 C 196 CYS ALA ASN SER VAL ALA THR PHE LEU ALA LYS ASP PRO SEQRES 10 C 196 LYS VAL THR LEU THR ILE PHE VAL ALA ARG LEU TYR TYR SEQRES 11 C 196 PHE TRP LYS PRO ASP TYR GLN GLN ALA LEU ARG ILE LEU SEQRES 12 C 196 ALA GLU ALA GLY ALA THR MET LYS ILE MET ASN TYR ASN SEQRES 13 C 196 GLU PHE GLN ASP CYS TRP ASN LYS PHE VAL ASP GLY ARG SEQRES 14 C 196 GLY LYS PRO PHE LYS PRO TRP ASN ASN LEU PRO LYS HIS SEQRES 15 C 196 TYR THR LEU LEU GLN ALA THR LEU GLY GLU LEU LEU ARG SEQRES 16 C 196 HIS SEQRES 1 D 196 GLY PRO ALA GLY SER MET LYS PRO GLN ILE ARG ASN MET SEQRES 2 D 196 VAL GLU PRO MET ASP PRO ARG THR PHE VAL SER ASN PHE SEQRES 3 D 196 ASN ASN ARG PRO ILE LEU SER GLY LEU ASP THR VAL TRP SEQRES 4 D 196 LEU CYS CYS GLU VAL LYS THR LYS ASP PRO SER GLY PRO SEQRES 5 D 196 PRO LEU ASP ALA LYS ILE PHE GLN GLY LYS VAL TYR PRO SEQRES 6 D 196 LYS ALA LYS TYR HIS PRO GLU MET ARG PHE LEU ARG TRP SEQRES 7 D 196 PHE HIS LYS TRP ARG GLN LEU HIS HIS ASP GLN GLU TYR SEQRES 8 D 196 LYS VAL THR TRP TYR VAL SER TRP SER PRO CYS THR ARG SEQRES 9 D 196 CYS ALA ASN SER VAL ALA THR PHE LEU ALA LYS ASP PRO SEQRES 10 D 196 LYS VAL THR LEU THR ILE PHE VAL ALA ARG LEU TYR TYR SEQRES 11 D 196 PHE TRP LYS PRO ASP TYR GLN GLN ALA LEU ARG ILE LEU SEQRES 12 D 196 ALA GLU ALA GLY ALA THR MET LYS ILE MET ASN TYR ASN SEQRES 13 D 196 GLU PHE GLN ASP CYS TRP ASN LYS PHE VAL ASP GLY ARG SEQRES 14 D 196 GLY LYS PRO PHE LYS PRO TRP ASN ASN LEU PRO LYS HIS SEQRES 15 D 196 TYR THR LEU LEU GLN ALA THR LEU GLY GLU LEU LEU ARG SEQRES 16 D 196 HIS HET ZN A 401 1 HET ZN B 401 1 HET ZN C 401 1 HET ZN D 401 1 HETNAM ZN ZINC ION FORMUL 5 ZN 4(ZN 2+) HELIX 1 AA1 ASP A 13 PHE A 21 1 9 HELIX 2 AA2 LYS A 61 TYR A 64 5 4 HELIX 3 AA3 HIS A 65 LEU A 80 1 16 HELIX 4 AA4 CYS A 97 ASP A 111 1 15 HELIX 5 AA5 LYS A 128 GLU A 144 1 13 HELIX 6 AA6 ALA A 145 ALA A 147 5 3 HELIX 7 AA7 ASN A 153 VAL A 165 1 13 HELIX 8 AA8 ASN A 177 HIS A 195 1 19 HELIX 9 AA9 ASP B 13 PHE B 21 1 9 HELIX 10 AB1 LYS B 61 TYR B 64 5 4 HELIX 11 AB2 HIS B 65 HIS B 81 1 17 HELIX 12 AB3 CYS B 97 ASP B 111 1 15 HELIX 13 AB4 LYS B 128 ALA B 145 1 14 HELIX 14 AB5 ASN B 153 VAL B 165 1 13 HELIX 15 AB6 ASN B 177 LEU B 193 1 17 HELIX 16 AB7 ASP C 13 PHE C 21 1 9 HELIX 17 AB8 LYS C 61 TYR C 64 5 4 HELIX 18 AB9 HIS C 65 HIS C 81 1 17 HELIX 19 AC1 CYS C 97 ASP C 111 1 15 HELIX 20 AC2 LYS C 128 ALA C 145 1 14 HELIX 21 AC3 ASN C 153 VAL C 165 1 13 HELIX 22 AC4 ASN C 177 ARG C 194 1 18 HELIX 23 AC5 ASP D 13 PHE D 21 1 9 HELIX 24 AC6 LYS D 61 TYR D 64 5 4 HELIX 25 AC7 HIS D 65 GLN D 79 1 15 HELIX 26 AC8 CYS D 97 ASP D 111 1 15 HELIX 27 AC9 LYS D 128 GLY D 146 1 15 HELIX 28 AD1 ASN D 153 VAL D 165 1 13 HELIX 29 AD2 ASN D 177 HIS D 195 1 19 SHEET 1 AA1 5 ASP A 50 LYS A 57 0 SHEET 2 AA1 5 THR A 32 VAL A 39 -1 N CYS A 37 O LYS A 52 SHEET 3 AA1 5 TRP A 90 VAL A 92 -1 O TYR A 91 N CYS A 36 SHEET 4 AA1 5 THR A 117 VAL A 120 1 O THR A 117 N TRP A 90 SHEET 5 AA1 5 THR A 148 ILE A 151 1 O THR A 148 N ILE A 118 SHEET 1 AA2 2 TYR A 86 LYS A 87 0 SHEET 2 AA2 2 VAL A 114 THR A 115 1 O THR A 115 N TYR A 86 SHEET 1 AA3 5 ILE B 53 LYS B 57 0 SHEET 2 AA3 5 THR B 32 CYS B 36 -1 N LEU B 35 O PHE B 54 SHEET 3 AA3 5 TRP B 90 TRP B 94 -1 O TYR B 91 N CYS B 36 SHEET 4 AA3 5 THR B 117 ARG B 122 1 O THR B 117 N TRP B 90 SHEET 5 AA3 5 THR B 148 ILE B 151 1 O LYS B 150 N VAL B 120 SHEET 1 AA4 2 TYR B 86 LYS B 87 0 SHEET 2 AA4 2 VAL B 114 THR B 115 1 O THR B 115 N TYR B 86 SHEET 1 AA5 5 ILE C 53 LYS C 57 0 SHEET 2 AA5 5 THR C 32 CYS C 36 -1 N LEU C 35 O PHE C 54 SHEET 3 AA5 5 TRP C 90 TRP C 94 -1 O TYR C 91 N CYS C 36 SHEET 4 AA5 5 THR C 117 ARG C 122 1 O THR C 117 N TRP C 90 SHEET 5 AA5 5 THR C 148 ILE C 151 1 O LYS C 150 N VAL C 120 SHEET 1 AA6 2 TYR C 86 LYS C 87 0 SHEET 2 AA6 2 VAL C 114 THR C 115 1 O THR C 115 N TYR C 86 SHEET 1 AA7 5 ILE D 53 LYS D 57 0 SHEET 2 AA7 5 THR D 32 CYS D 36 -1 N LEU D 35 O PHE D 54 SHEET 3 AA7 5 TRP D 90 TRP D 94 -1 O SER D 93 N TRP D 34 SHEET 4 AA7 5 THR D 117 ARG D 122 1 O THR D 117 N TRP D 90 SHEET 5 AA7 5 THR D 148 ILE D 151 1 O LYS D 150 N VAL D 120 SHEET 1 AA8 2 TYR D 86 LYS D 87 0 SHEET 2 AA8 2 VAL D 114 THR D 115 1 O THR D 115 N TYR D 86 LINK ND1 HIS A 65 ZN ZN A 401 1555 1555 1.76 LINK SG CYS A 97 ZN ZN A 401 1555 1555 2.85 LINK SG CYS A 100 ZN ZN A 401 1555 1555 2.07 LINK ND1 HIS B 65 ZN ZN B 401 1555 1555 2.14 LINK SG CYS B 97 ZN ZN B 401 1555 1555 2.80 LINK SG CYS B 100 ZN ZN B 401 1555 1555 2.28 LINK ND1 HIS C 65 ZN ZN C 401 1555 1555 2.12 LINK SG CYS C 97 ZN ZN C 401 1555 1555 2.66 LINK SG CYS C 100 ZN ZN C 401 1555 1555 2.30 LINK ND1 HIS D 65 ZN ZN D 401 1555 1555 2.02 LINK SG CYS D 97 ZN ZN D 401 1555 1555 2.89 LINK SG CYS D 100 ZN ZN D 401 1555 1555 2.09 CISPEP 1 PRO A 60 LYS A 61 0 5.92 CISPEP 2 PRO B 60 LYS B 61 0 5.83 CISPEP 3 PRO C 60 LYS C 61 0 8.81 CISPEP 4 PRO D 60 LYS D 61 0 7.63 SITE 1 AC1 4 HIS A 65 GLU A 67 CYS A 97 CYS A 100 SITE 1 AC2 4 HIS B 65 GLU B 67 CYS B 97 CYS B 100 SITE 1 AC3 3 HIS C 65 CYS C 97 CYS C 100 SITE 1 AC4 4 HIS D 65 GLU D 67 CYS D 97 CYS D 100 CRYST1 152.395 152.395 79.778 90.00 90.00 120.00 P 32 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006562 0.003789 0.000000 0.00000 SCALE2 0.000000 0.007577 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012535 0.00000