HEADER HYDROLASE 31-MAY-16 5K8U TITLE CRYSTAL STRUCTURE OF ZIKV NS3 HELICASE IN COMPLEX WITH ADP AND MN2+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZIKA VIRUS NS3 HELICASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZIKA VIRUS; SOURCE 3 ORGANISM_TAXID: 64320; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NTPASE, HELICASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR X.CAO,Y.LI,T.JIN REVDAT 5 20-MAR-24 5K8U 1 REMARK REVDAT 4 09-JUN-21 5K8U 1 TITLE LINK REVDAT 3 06-DEC-17 5K8U 1 JRNL REVDAT 2 04-OCT-17 5K8U 1 JRNL REMARK REVDAT 1 09-NOV-16 5K8U 0 JRNL AUTH X.CAO,Y.LI,X.JIN,Y.LI,F.GUO,T.JIN JRNL TITL MOLECULAR MECHANISM OF DIVALENT-METAL-INDUCED ACTIVATION OF JRNL TITL 2 NS3 HELICASE AND INSIGHTS INTO ZIKA VIRUS INHIBITOR DESIGN. JRNL REF NUCLEIC ACIDS RES. V. 44 10505 2016 JRNL REFN ESSN 1362-4962 JRNL PMID 27915293 JRNL DOI 10.1093/NAR/GKW941 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 50909 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.750 REMARK 3 FREE R VALUE TEST SET COUNT : 1898 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1825 - 4.8592 0.98 3637 147 0.1513 0.1856 REMARK 3 2 4.8592 - 3.8579 0.96 3584 139 0.1333 0.1493 REMARK 3 3 3.8579 - 3.3705 0.98 3628 139 0.1447 0.1521 REMARK 3 4 3.3705 - 3.0625 0.99 3680 144 0.1647 0.2274 REMARK 3 5 3.0625 - 2.8430 0.99 3691 141 0.1723 0.2432 REMARK 3 6 2.8430 - 2.6754 0.96 3517 131 0.1691 0.2394 REMARK 3 7 2.6754 - 2.5415 0.99 3647 145 0.1721 0.2340 REMARK 3 8 2.5415 - 2.4309 0.97 3627 141 0.1732 0.2259 REMARK 3 9 2.4309 - 2.3373 0.98 3656 129 0.1652 0.1738 REMARK 3 10 2.3373 - 2.2566 0.99 3658 150 0.1647 0.2171 REMARK 3 11 2.2566 - 2.1861 0.98 3627 141 0.1662 0.2210 REMARK 3 12 2.1861 - 2.1236 0.95 3497 146 0.1749 0.2327 REMARK 3 13 2.1236 - 2.0677 0.97 3647 135 0.1750 0.2212 REMARK 3 14 2.0677 - 2.0173 0.98 3604 131 0.1663 0.2055 REMARK 3 15 2.0173 - 1.9714 0.99 3646 147 0.1687 0.2376 REMARK 3 16 1.9714 - 1.9294 0.98 3716 139 0.1769 0.2424 REMARK 3 17 1.9294 - 1.8909 0.98 3617 144 0.1809 0.2110 REMARK 3 18 1.8909 - 1.8552 0.98 3626 139 0.1894 0.2733 REMARK 3 19 1.8552 - 1.8220 0.98 3669 145 0.1955 0.1969 REMARK 3 20 1.8220 - 1.7912 0.95 3531 141 0.2050 0.2264 REMARK 3 21 1.7912 - 1.7623 0.97 3566 135 0.2011 0.2320 REMARK 3 22 1.7623 - 1.7351 0.98 3701 159 0.2046 0.2336 REMARK 3 23 1.7351 - 1.7096 0.98 3607 115 0.2249 0.2340 REMARK 3 24 1.7096 - 1.6855 0.97 3633 161 0.2439 0.2993 REMARK 3 25 1.6855 - 1.6628 0.99 3607 138 0.2411 0.2989 REMARK 3 26 1.6628 - 1.6412 0.97 3669 136 0.2661 0.3409 REMARK 3 27 1.6412 - 1.6207 0.92 3284 134 0.3367 0.4176 REMARK 3 28 1.6207 - 1.6011 0.50 1907 79 0.4336 0.4471 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3663 REMARK 3 ANGLE : 0.884 4984 REMARK 3 CHIRALITY : 0.056 551 REMARK 3 PLANARITY : 0.006 645 REMARK 3 DIHEDRAL : 18.853 2244 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE ENTRY CONTAINS FRIEDEL PAIRS IN REMARK 3 I_PLUS/MINUS COLUMNS REMARK 4 REMARK 4 5K8U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1000221330. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50909 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 5.290 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN I_PLUS/MINUS COLUMNS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 6000, 5% MPD 0.1M, HEPES PH REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.61000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 164 REMARK 465 SER A 165 REMARK 465 VAL A 166 REMARK 465 ASP A 167 REMARK 465 GLY A 168 REMARK 465 ARG A 169 REMARK 465 ARG A 170 REMARK 465 GLU A 171 REMARK 465 GLU A 172 REMARK 465 ALA A 247 REMARK 465 VAL A 248 REMARK 465 ASN A 249 REMARK 465 VAL A 250 REMARK 465 THR A 251 REMARK 465 HIS A 252 REMARK 465 SER A 621 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 242 OG SER A 253 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 187 1.08 82.16 REMARK 500 THR A 316 137.94 -170.11 REMARK 500 ASP A 410 -8.58 -59.27 REMARK 500 MET A 414 68.62 -104.44 REMARK 500 LEU A 499 -60.59 -126.90 REMARK 500 GLN A 500 110.02 -171.19 REMARK 500 ASP A 501 -120.97 50.47 REMARK 500 LYS A 591 76.71 -155.69 REMARK 500 CYS A 600 29.20 -141.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1173 DISTANCE = 5.84 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 703 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 195 NE2 REMARK 620 2 HOH A 805 O 89.6 REMARK 620 3 HOH A 840 O 90.8 165.9 REMARK 620 4 HOH A1045 O 90.1 76.0 89.9 REMARK 620 5 HOH A1106 O 90.0 108.7 85.4 175.3 REMARK 620 6 HOH A1143 O 178.5 89.5 89.8 88.5 91.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 702 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 201 OG1 REMARK 620 2 GLU A 286 OE2 91.4 REMARK 620 3 ADP A 701 O3B 89.3 178.8 REMARK 620 4 HOH A 880 O 94.9 92.7 86.3 REMARK 620 5 HOH A 882 O 87.1 86.7 94.3 177.9 REMARK 620 6 HOH A 898 O 177.6 86.4 92.9 86.3 91.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 705 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5JWH RELATED DB: PDB REMARK 900 RELATED ID: 5K8I RELATED DB: PDB REMARK 900 RELATED ID: 5K8L RELATED DB: PDB REMARK 900 RELATED ID: 5K8T RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 A SEQUENCE REFERENCE FOR THIS PROTEIN DOES NOT CURRENTLY EXIST. DBREF 5K8U A 164 621 PDB 5K8U 5K8U 164 621 SEQRES 1 A 458 GLY SER VAL ASP GLY ARG ARG GLU GLU GLU THR PRO VAL SEQRES 2 A 458 GLU CYS PHE GLU PRO SER MET LEU LYS LYS LYS GLN LEU SEQRES 3 A 458 THR VAL LEU ASP LEU HIS PRO GLY ALA GLY LYS THR ARG SEQRES 4 A 458 ARG VAL LEU PRO GLU ILE VAL ARG GLU ALA ILE LYS THR SEQRES 5 A 458 ARG LEU ARG THR VAL ILE LEU ALA PRO THR ARG VAL VAL SEQRES 6 A 458 ALA ALA GLU MET GLU GLU ALA LEU ARG GLY LEU PRO VAL SEQRES 7 A 458 ARG TYR MET THR THR ALA VAL ASN VAL THR HIS SER GLY SEQRES 8 A 458 THR GLU ILE VAL ASP LEU MET CYS HIS ALA THR PHE THR SEQRES 9 A 458 SER ARG LEU LEU GLN PRO ILE ARG VAL PRO ASN TYR ASN SEQRES 10 A 458 LEU TYR ILE MET ASP GLU ALA HIS PHE THR ASP PRO SER SEQRES 11 A 458 SER ILE ALA ALA ARG GLY TYR ILE SER THR ARG VAL GLU SEQRES 12 A 458 MET GLY GLU ALA ALA ALA ILE PHE MET THR ALA THR PRO SEQRES 13 A 458 PRO GLY THR ARG ASP ALA PHE PRO ASP SER ASN SER PRO SEQRES 14 A 458 ILE MET ASP THR GLU VAL GLU VAL PRO GLU ARG ALA TRP SEQRES 15 A 458 SER SER GLY PHE ASP TRP VAL THR ASP HIS SER GLY LYS SEQRES 16 A 458 THR VAL TRP PHE VAL PRO SER VAL ARG ASN GLY ASN GLU SEQRES 17 A 458 ILE ALA ALA CYS LEU THR LYS ALA GLY LYS ARG VAL ILE SEQRES 18 A 458 GLN LEU SER ARG LYS THR PHE GLU THR GLU PHE GLN LYS SEQRES 19 A 458 THR LYS HIS GLN GLU TRP ASP PHE VAL VAL THR THR ASP SEQRES 20 A 458 ILE SER GLU MET GLY ALA ASN PHE LYS ALA ASP ARG VAL SEQRES 21 A 458 ILE ASP SER ARG ARG CYS LEU LYS PRO VAL ILE LEU ASP SEQRES 22 A 458 GLY GLU ARG VAL ILE LEU ALA GLY PRO MET PRO VAL THR SEQRES 23 A 458 HIS ALA SER ALA ALA GLN ARG ARG GLY ARG ILE GLY ARG SEQRES 24 A 458 ASN PRO ASN LYS PRO GLY ASP GLU TYR LEU TYR GLY GLY SEQRES 25 A 458 GLY CYS ALA GLU THR ASP GLU ASP HIS ALA HIS TRP LEU SEQRES 26 A 458 GLU ALA ARG MET LEU LEU ASP ASN ILE TYR LEU GLN ASP SEQRES 27 A 458 GLY LEU ILE ALA SER LEU TYR ARG PRO GLU ALA ASP LYS SEQRES 28 A 458 VAL ALA ALA ILE GLU GLY GLU PHE LYS LEU ARG THR GLU SEQRES 29 A 458 GLN ARG LYS THR PHE VAL GLU LEU MET LYS ARG GLY ASP SEQRES 30 A 458 LEU PRO VAL TRP LEU ALA TYR GLN VAL ALA SER ALA GLY SEQRES 31 A 458 ILE THR TYR THR ASP ARG ARG TRP CYS PHE ASP GLY THR SEQRES 32 A 458 THR ASN ASN THR ILE MET GLU ASP SER VAL PRO ALA GLU SEQRES 33 A 458 VAL TRP THR ARG HIS GLY GLU LYS ARG VAL LEU LYS PRO SEQRES 34 A 458 ARG TRP MET ASP ALA ARG VAL CYS SER ASP HIS ALA ALA SEQRES 35 A 458 LEU LYS SER PHE LYS GLU PHE ALA ALA GLY LYS ARG ALA SEQRES 36 A 458 ALA ALA SER HET ADP A 701 27 HET MN A 702 1 HET MN A 703 1 HET EDO A 704 4 HET CL A 705 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MN MANGANESE (II) ION HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 MN 2(MN 2+) FORMUL 5 EDO C2 H6 O2 FORMUL 6 CL CL 1- FORMUL 7 HOH *373(H2 O) HELIX 1 AA1 GLU A 180 LYS A 185 5 6 HELIX 2 AA2 ARG A 203 THR A 215 1 13 HELIX 3 AA3 THR A 225 LEU A 236 1 12 HELIX 4 AA4 HIS A 263 LEU A 271 1 9 HELIX 5 AA5 ASP A 291 MET A 307 1 17 HELIX 6 AA6 PHE A 349 ASP A 354 1 6 HELIX 7 AA7 SER A 365 ALA A 379 1 15 HELIX 8 AA8 THR A 390 GLN A 396 1 7 HELIX 9 AA9 LYS A 397 HIS A 400 5 4 HELIX 10 AB1 ASP A 410 MET A 414 5 5 HELIX 11 AB2 THR A 449 GLY A 458 1 10 HELIX 12 AB3 HIS A 484 ASP A 495 1 12 HELIX 13 AB4 TYR A 508 VAL A 515 5 8 HELIX 14 AB5 ARG A 525 ARG A 538 1 14 HELIX 15 AB6 PRO A 542 ALA A 552 1 11 HELIX 16 AB7 ARG A 559 PHE A 563 5 5 HELIX 17 AB8 THR A 566 THR A 570 5 5 HELIX 18 AB9 ASP A 596 CYS A 600 5 5 HELIX 19 AC1 ASP A 602 ALA A 614 1 13 SHEET 1 AA1 6 LEU A 189 LEU A 192 0 SHEET 2 AA1 6 ALA A 311 MET A 315 1 O PHE A 314 N THR A 190 SHEET 3 AA1 6 LEU A 281 ASP A 285 1 N MET A 284 O MET A 315 SHEET 4 AA1 6 THR A 219 ALA A 223 1 N LEU A 222 O ILE A 283 SHEET 5 AA1 6 VAL A 258 CYS A 262 1 O ASP A 259 N ILE A 221 SHEET 6 AA1 6 VAL A 241 TYR A 243 1 N ARG A 242 O VAL A 258 SHEET 1 AA2 6 MET A 334 GLU A 337 0 SHEET 2 AA2 6 GLU A 470 TYR A 473 1 O TYR A 471 N MET A 334 SHEET 3 AA2 6 ARG A 422 ASP A 425 1 N ASP A 425 O LEU A 472 SHEET 4 AA2 6 THR A 359 PHE A 362 1 N VAL A 360 O ARG A 422 SHEET 5 AA2 6 PHE A 405 THR A 408 1 O VAL A 406 N TRP A 361 SHEET 6 AA2 6 VAL A 383 LEU A 386 1 N ILE A 384 O VAL A 407 SHEET 1 AA3 2 ARG A 428 LEU A 435 0 SHEET 2 AA3 2 ARG A 439 PRO A 447 -1 O ALA A 443 N LYS A 431 SHEET 1 AA4 2 MET A 572 GLU A 573 0 SHEET 2 AA4 2 VAL A 576 PRO A 577 -1 O VAL A 576 N GLU A 573 SHEET 1 AA5 2 GLU A 579 TRP A 581 0 SHEET 2 AA5 2 LYS A 587 VAL A 589 -1 O ARG A 588 N VAL A 580 LINK NE2 HIS A 195 MN MN A 703 1555 1555 2.33 LINK OG1 THR A 201 MN MN A 702 1555 1555 2.22 LINK OE2 GLU A 286 MN MN A 702 1555 1555 2.24 LINK O3B ADP A 701 MN MN A 702 1555 1555 2.20 LINK MN MN A 702 O HOH A 880 1555 1555 2.21 LINK MN MN A 702 O HOH A 882 1555 1555 2.23 LINK MN MN A 702 O HOH A 898 1555 1555 2.25 LINK MN MN A 703 O HOH A 805 1555 2957 2.34 LINK MN MN A 703 O HOH A 840 1555 1555 2.41 LINK MN MN A 703 O HOH A1045 1555 1555 2.39 LINK MN MN A 703 O HOH A1106 1555 2957 2.41 LINK MN MN A 703 O HOH A1143 1555 2957 2.40 CISPEP 1 GLY A 444 PRO A 445 0 -0.56 SITE 1 AC1 18 GLY A 197 ALA A 198 GLY A 199 LYS A 200 SITE 2 AC1 18 THR A 201 ARG A 202 ASN A 330 ARG A 462 SITE 3 AC1 18 MN A 702 HOH A 829 HOH A 870 HOH A 880 SITE 4 AC1 18 HOH A 898 HOH A 931 HOH A 964 HOH A 971 SITE 5 AC1 18 HOH A 974 HOH A1090 SITE 1 AC2 6 THR A 201 GLU A 286 ADP A 701 HOH A 880 SITE 2 AC2 6 HOH A 882 HOH A 898 SITE 1 AC3 3 HIS A 195 HOH A 840 HOH A1045 SITE 1 AC4 1 TRP A 351 SITE 1 AC5 2 ARG A 388 THR A 409 CRYST1 63.490 53.220 64.950 90.00 105.31 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015751 0.000000 0.004311 0.00000 SCALE2 0.000000 0.018790 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015963 0.00000