HEADER TRANSFERASE 03-JUN-16 5KBF TITLE CAMP BOUND PFPKA-R (141-441) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE REGULATORY SUBUNIT, PUTATIVE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 144-441; COMPND 5 SYNONYM: CAMP-DEPENDENT PROTEIN KINASE REGULATORY SUBUNIT; COMPND 6 EC: 2.7.11.11; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM (ISOLATE 3D7); SOURCE 3 ORGANISM_TAXID: 36329; SOURCE 4 STRAIN: ISOLATE 3D7; SOURCE 5 GENE: PKAR, PF3D7_1223100, PFL1110C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: K12; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS PLASMODIUM FALCIPARUM, PKA, PROTEIN KINASE A, CAMP, CBD, CYCLIC KEYWDS 2 NUCLEOTIDE BINDING, CNB, REGULATORY DOMAIN, R, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.R.LITTLER,P.R.GILSON,B.S.CRABB,J.J.ROSSJOHN REVDAT 6 27-SEP-23 5KBF 1 REMARK REVDAT 5 08-JAN-20 5KBF 1 REMARK REVDAT 4 27-SEP-17 5KBF 1 REMARK REVDAT 3 14-DEC-16 5KBF 1 JRNL REMARK REVDAT 2 26-OCT-16 5KBF 1 JRNL REVDAT 1 12-OCT-16 5KBF 0 JRNL AUTH D.R.LITTLER,H.E.BULLEN,K.L.HARVEY,T.BEDDOE,B.S.CRABB, JRNL AUTH 2 J.ROSSJOHN,P.R.GILSON JRNL TITL DISRUPTING THE ALLOSTERIC INTERACTION BETWEEN THE PLASMODIUM JRNL TITL 2 FALCIPARUM CAMP-DEPENDENT KINASE AND ITS REGULATORY SUBUNIT. JRNL REF J. BIOL. CHEM. V. 291 25375 2016 JRNL REFN ESSN 1083-351X JRNL PMID 27738107 JRNL DOI 10.1074/JBC.M116.750174 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 58355 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.247 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.285 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2951 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.4710 - 5.5150 0.99 2837 143 0.2236 0.2850 REMARK 3 2 5.5150 - 4.3784 1.00 2712 137 0.2008 0.2056 REMARK 3 3 4.3784 - 3.8253 1.00 2713 131 0.1984 0.2630 REMARK 3 4 3.8253 - 3.4757 1.00 2650 140 0.2253 0.2482 REMARK 3 5 3.4757 - 3.2266 1.00 2648 149 0.2485 0.3365 REMARK 3 6 3.2266 - 3.0364 1.00 2622 146 0.2782 0.2838 REMARK 3 7 3.0364 - 2.8844 1.00 2636 147 0.2757 0.3136 REMARK 3 8 2.8844 - 2.7588 1.00 2641 147 0.2767 0.3019 REMARK 3 9 2.7588 - 2.6526 1.00 2602 148 0.2712 0.3334 REMARK 3 10 2.6526 - 2.5611 1.00 2617 149 0.2829 0.3104 REMARK 3 11 2.5611 - 2.4810 1.00 2613 148 0.2847 0.3493 REMARK 3 12 2.4810 - 2.4101 1.00 2627 136 0.2804 0.3190 REMARK 3 13 2.4101 - 2.3467 1.00 2610 150 0.2728 0.3259 REMARK 3 14 2.3467 - 2.2894 1.00 2604 138 0.2850 0.3001 REMARK 3 15 2.2894 - 2.2374 1.00 2646 130 0.2890 0.3226 REMARK 3 16 2.2374 - 2.1898 1.00 2582 143 0.2938 0.3257 REMARK 3 17 2.1898 - 2.1460 1.00 2643 123 0.3092 0.3607 REMARK 3 18 2.1460 - 2.1055 1.00 2605 128 0.3096 0.3078 REMARK 3 19 2.1055 - 2.0679 1.00 2593 133 0.3257 0.3365 REMARK 3 20 2.0679 - 2.0328 1.00 2579 145 0.3505 0.3620 REMARK 3 21 2.0328 - 2.0000 1.00 2624 140 0.3596 0.3776 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4703 REMARK 3 ANGLE : 1.256 6340 REMARK 3 CHIRALITY : 0.051 712 REMARK 3 PLANARITY : 0.004 791 REMARK 3 DIHEDRAL : 17.709 1792 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 149 THROUGH 291 ) REMARK 3 ORIGIN FOR THE GROUP (A): 80.0133 67.6988 101.4679 REMARK 3 T TENSOR REMARK 3 T11: 0.3333 T22: 0.3212 REMARK 3 T33: 0.4044 T12: 0.1290 REMARK 3 T13: -0.0329 T23: 0.1258 REMARK 3 L TENSOR REMARK 3 L11: 4.2377 L22: 7.0288 REMARK 3 L33: 5.5193 L12: 1.1814 REMARK 3 L13: 0.9727 L23: -2.7422 REMARK 3 S TENSOR REMARK 3 S11: 0.0731 S12: 0.3502 S13: 0.0944 REMARK 3 S21: -0.2485 S22: -0.6089 S23: -0.5505 REMARK 3 S31: -0.2391 S32: 0.4496 S33: 0.2912 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 292 THROUGH 331 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.0913 80.2792 86.7162 REMARK 3 T TENSOR REMARK 3 T11: 0.4730 T22: 0.5064 REMARK 3 T33: 0.4827 T12: 0.1747 REMARK 3 T13: 0.0784 T23: 0.2028 REMARK 3 L TENSOR REMARK 3 L11: 2.9433 L22: 8.6017 REMARK 3 L33: 3.4570 L12: -3.5948 REMARK 3 L13: 1.0769 L23: -4.4177 REMARK 3 S TENSOR REMARK 3 S11: 0.5574 S12: 0.8540 S13: 0.3279 REMARK 3 S21: -0.5622 S22: -0.7018 S23: -0.5470 REMARK 3 S31: 0.3166 S32: 0.6577 S33: 0.2099 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 332 THROUGH 441 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.4523 96.5139 90.0731 REMARK 3 T TENSOR REMARK 3 T11: 0.3530 T22: 0.4118 REMARK 3 T33: 0.3586 T12: 0.0765 REMARK 3 T13: 0.1183 T23: 0.2117 REMARK 3 L TENSOR REMARK 3 L11: 4.5513 L22: 8.3715 REMARK 3 L33: 3.1484 L12: -2.5775 REMARK 3 L13: 0.5178 L23: -1.8062 REMARK 3 S TENSOR REMARK 3 S11: -0.0944 S12: -0.3176 S13: 0.0914 REMARK 3 S21: 0.6345 S22: 0.5428 S23: 0.2535 REMARK 3 S31: -0.1683 S32: 0.0460 S33: -0.2257 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 149 THROUGH 291 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.9246 16.1778 49.4848 REMARK 3 T TENSOR REMARK 3 T11: 0.4321 T22: 0.6037 REMARK 3 T33: 0.5729 T12: 0.1874 REMARK 3 T13: 0.0302 T23: 0.3650 REMARK 3 L TENSOR REMARK 3 L11: 5.3096 L22: 5.1813 REMARK 3 L33: 6.6008 L12: 2.2970 REMARK 3 L13: -1.0390 L23: -2.0397 REMARK 3 S TENSOR REMARK 3 S11: -0.1762 S12: -0.4439 S13: -0.5475 REMARK 3 S21: -0.2824 S22: -0.8129 S23: -0.6512 REMARK 3 S31: 0.3154 S32: 0.8805 S33: 0.5419 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 292 THROUGH 441 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.3765 39.7576 36.7109 REMARK 3 T TENSOR REMARK 3 T11: 0.3691 T22: 0.7391 REMARK 3 T33: 0.4692 T12: 0.0348 REMARK 3 T13: 0.1194 T23: 0.3525 REMARK 3 L TENSOR REMARK 3 L11: 3.7849 L22: 7.7837 REMARK 3 L33: 1.9698 L12: -3.5805 REMARK 3 L13: 0.8890 L23: -3.4554 REMARK 3 S TENSOR REMARK 3 S11: -0.2864 S12: -0.8728 S13: -0.3039 REMARK 3 S21: 0.2360 S22: 0.7765 S23: 0.0509 REMARK 3 S31: 0.0602 S32: -0.3171 S33: -0.0729 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: DUE TO N-TERMINAL DISORDER THE IDENTITY REMARK 3 OF RESIDUES SER-149, VAL-150, SER-151, ALA-152 IS ONLY TENTATIVE. REMARK 4 REMARK 4 5KBF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1000221992. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58452 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 46.458 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.000 REMARK 200 R MERGE (I) : 0.03000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5K8S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN AT 12 MG/ML WERE SET IN A 1:1 REMARK 280 RATIO AGAINST A RESERVOIR CONSISTING OF 20% W/V POLYETHYLENE REMARK 280 GLYCOL 3350, 0.1M NAF AND 0.1M 1,3-BISPROPANE PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 39.36300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.89850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.36300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.89850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 141 REMARK 465 PRO A 142 REMARK 465 GLY A 143 REMARK 465 GLN A 144 REMARK 465 LYS A 145 REMARK 465 LYS A 146 REMARK 465 ARG A 147 REMARK 465 LEU A 148 REMARK 465 GLU A 153 REMARK 465 ALA A 154 REMARK 465 TYR A 155 REMARK 465 GLY A 156 REMARK 465 ASP A 157 REMARK 465 TRP A 158 REMARK 465 ASN A 159 REMARK 465 LYS A 160 REMARK 465 LYS A 161 REMARK 465 ILE A 162 REMARK 465 ASP A 163 REMARK 465 GLY B 141 REMARK 465 PRO B 142 REMARK 465 GLY B 143 REMARK 465 GLN B 144 REMARK 465 LYS B 145 REMARK 465 LYS B 146 REMARK 465 ARG B 147 REMARK 465 LEU B 148 REMARK 465 GLU B 153 REMARK 465 ALA B 154 REMARK 465 TYR B 155 REMARK 465 GLY B 156 REMARK 465 ASP B 157 REMARK 465 TRP B 158 REMARK 465 ASN B 159 REMARK 465 LYS B 160 REMARK 465 LYS B 161 REMARK 465 ILE B 162 REMARK 465 ASP B 163 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 149 OG REMARK 470 VAL A 150 CG1 CG2 REMARK 470 SER A 151 OG REMARK 470 LYS A 195 CG CD CE NZ REMARK 470 LYS A 196 CG CD CE NZ REMARK 470 LYS A 267 CG CD CE NZ REMARK 470 SER B 149 OG REMARK 470 VAL B 150 CG1 CG2 REMARK 470 SER B 151 OG REMARK 470 ASN B 164 CG OD1 ND2 REMARK 470 LYS B 277 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 168 O HOH A 601 2.13 REMARK 500 OH TYR B 303 OG SER B 330 2.16 REMARK 500 OH TYR A 303 OG SER A 330 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 219 103.59 -51.04 REMARK 500 GLU A 241 -125.13 50.80 REMARK 500 LYS A 254 -8.77 84.28 REMARK 500 ASN A 394 -159.21 -160.87 REMARK 500 LEU A 410 44.95 -104.95 REMARK 500 PRO A 412 -9.66 -55.19 REMARK 500 ASN B 191 2.83 -59.84 REMARK 500 ASP B 230 -66.37 -91.24 REMARK 500 GLU B 241 -93.83 0.83 REMARK 500 ASN B 242 47.29 -82.60 REMARK 500 LYS B 254 -5.66 79.59 REMARK 500 ARG B 386 123.04 -39.69 REMARK 500 ASN B 394 -162.65 -170.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CMP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CMP A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CMP B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CMP B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5K8S RELATED DB: PDB REMARK 900 5K8S DBREF 5KBF A 144 441 UNP Q7KQK0 Q7KQK0_PLAF7 144 441 DBREF 5KBF B 144 441 UNP Q7KQK0 Q7KQK0_PLAF7 144 441 SEQADV 5KBF GLY A 141 UNP Q7KQK0 EXPRESSION TAG SEQADV 5KBF PRO A 142 UNP Q7KQK0 EXPRESSION TAG SEQADV 5KBF GLY A 143 UNP Q7KQK0 EXPRESSION TAG SEQADV 5KBF GLY B 141 UNP Q7KQK0 EXPRESSION TAG SEQADV 5KBF PRO B 142 UNP Q7KQK0 EXPRESSION TAG SEQADV 5KBF GLY B 143 UNP Q7KQK0 EXPRESSION TAG SEQRES 1 A 301 GLY PRO GLY GLN LYS LYS ARG LEU SER VAL SER ALA GLU SEQRES 2 A 301 ALA TYR GLY ASP TRP ASN LYS LYS ILE ASP ASN PHE ILE SEQRES 3 A 301 PRO LYS VAL TYR LYS LYS ASP GLU LYS GLU LYS ALA LYS SEQRES 4 A 301 ILE ARG GLU ALA LEU ASN GLU SER PHE LEU PHE ASN HIS SEQRES 5 A 301 LEU ASN LYS LYS GLU PHE GLU ILE ILE VAL ASN ALA PHE SEQRES 6 A 301 PHE ASP LYS ASN VAL GLU LYS GLY VAL ASN ILE ILE ASN SEQRES 7 A 301 GLU GLY ASP TYR GLY ASP LEU LEU TYR VAL ILE ASP GLN SEQRES 8 A 301 GLY GLU VAL GLU ILE TYR LYS THR LYS GLU ASN ASN LYS SEQRES 9 A 301 LYS GLU VAL LEU THR VAL LEU LYS SER LYS ASP VAL PHE SEQRES 10 A 301 GLY GLU LEU ALA LEU LEU TYR ASN SER LYS ARG ALA ALA SEQRES 11 A 301 THR ALA THR ALA LEU THR LYS CYS HIS LEU TRP ALA LEU SEQRES 12 A 301 ASP ARG GLU SER PHE THR TYR ILE ILE LYS ASP MET VAL SEQRES 13 A 301 ALA LYS LYS ARG LYS MET TYR GLU ASP ILE LEU SER HIS SEQRES 14 A 301 VAL ASN ILE LEU LYS ASP MET ASP PRO TYR GLU ARG CYS SEQRES 15 A 301 LYS VAL ALA ASP CYS LEU LYS SER LYS SER TYR ASN ASP SEQRES 16 A 301 GLY GLU ILE ILE ILE LYS GLU GLY GLU GLU GLY ASP THR SEQRES 17 A 301 PHE PHE ILE LEU ILE ASP GLY ASN ALA VAL ALA SER LYS SEQRES 18 A 301 ASP ASN LYS VAL ILE LYS THR TYR THR LYS GLY ASP TYR SEQRES 19 A 301 PHE GLY GLU LEU ALA LEU LEU LYS ASN LYS PRO ARG ALA SEQRES 20 A 301 ALA THR ILE LYS ALA GLN ASN PHE CYS GLN VAL VAL TYR SEQRES 21 A 301 LEU ASP ARG LYS SER PHE LYS ARG LEU LEU GLY PRO ILE SEQRES 22 A 301 GLU ASP ILE LEU HIS ARG ASN VAL GLU ASN TYR LYS LYS SEQRES 23 A 301 VAL LEU ASN GLU LEU GLY LEU ASP THR THR CYS ILE ASP SEQRES 24 A 301 GLU ASN SEQRES 1 B 301 GLY PRO GLY GLN LYS LYS ARG LEU SER VAL SER ALA GLU SEQRES 2 B 301 ALA TYR GLY ASP TRP ASN LYS LYS ILE ASP ASN PHE ILE SEQRES 3 B 301 PRO LYS VAL TYR LYS LYS ASP GLU LYS GLU LYS ALA LYS SEQRES 4 B 301 ILE ARG GLU ALA LEU ASN GLU SER PHE LEU PHE ASN HIS SEQRES 5 B 301 LEU ASN LYS LYS GLU PHE GLU ILE ILE VAL ASN ALA PHE SEQRES 6 B 301 PHE ASP LYS ASN VAL GLU LYS GLY VAL ASN ILE ILE ASN SEQRES 7 B 301 GLU GLY ASP TYR GLY ASP LEU LEU TYR VAL ILE ASP GLN SEQRES 8 B 301 GLY GLU VAL GLU ILE TYR LYS THR LYS GLU ASN ASN LYS SEQRES 9 B 301 LYS GLU VAL LEU THR VAL LEU LYS SER LYS ASP VAL PHE SEQRES 10 B 301 GLY GLU LEU ALA LEU LEU TYR ASN SER LYS ARG ALA ALA SEQRES 11 B 301 THR ALA THR ALA LEU THR LYS CYS HIS LEU TRP ALA LEU SEQRES 12 B 301 ASP ARG GLU SER PHE THR TYR ILE ILE LYS ASP MET VAL SEQRES 13 B 301 ALA LYS LYS ARG LYS MET TYR GLU ASP ILE LEU SER HIS SEQRES 14 B 301 VAL ASN ILE LEU LYS ASP MET ASP PRO TYR GLU ARG CYS SEQRES 15 B 301 LYS VAL ALA ASP CYS LEU LYS SER LYS SER TYR ASN ASP SEQRES 16 B 301 GLY GLU ILE ILE ILE LYS GLU GLY GLU GLU GLY ASP THR SEQRES 17 B 301 PHE PHE ILE LEU ILE ASP GLY ASN ALA VAL ALA SER LYS SEQRES 18 B 301 ASP ASN LYS VAL ILE LYS THR TYR THR LYS GLY ASP TYR SEQRES 19 B 301 PHE GLY GLU LEU ALA LEU LEU LYS ASN LYS PRO ARG ALA SEQRES 20 B 301 ALA THR ILE LYS ALA GLN ASN PHE CYS GLN VAL VAL TYR SEQRES 21 B 301 LEU ASP ARG LYS SER PHE LYS ARG LEU LEU GLY PRO ILE SEQRES 22 B 301 GLU ASP ILE LEU HIS ARG ASN VAL GLU ASN TYR LYS LYS SEQRES 23 B 301 VAL LEU ASN GLU LEU GLY LEU ASP THR THR CYS ILE ASP SEQRES 24 B 301 GLU ASN HET CMP A 501 22 HET CMP A 502 22 HET CMP B 501 22 HET CMP B 502 22 HETNAM CMP ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE HETSYN CMP CYCLIC AMP; CAMP FORMUL 3 CMP 4(C10 H12 N5 O6 P) FORMUL 7 HOH *36(H2 O) HELIX 1 AA1 ASP A 173 SER A 187 1 15 HELIX 2 AA2 ASN A 194 PHE A 205 1 12 HELIX 3 AA3 GLY A 258 ASN A 265 1 8 HELIX 4 AA4 ARG A 285 ILE A 292 1 8 HELIX 5 AA5 ILE A 292 HIS A 309 1 18 HELIX 6 AA6 VAL A 310 LYS A 314 5 5 HELIX 7 AA7 ASP A 317 LEU A 328 1 12 HELIX 8 AA8 GLU A 377 ASN A 383 1 7 HELIX 9 AA9 ARG A 403 LEU A 410 1 8 HELIX 10 AB1 ILE A 413 LEU A 431 1 19 HELIX 11 AB2 ASP B 173 SER B 187 1 15 HELIX 12 AB3 ASN B 194 PHE B 205 1 12 HELIX 13 AB4 GLY B 258 ASN B 265 1 8 HELIX 14 AB5 ARG B 285 ILE B 292 1 8 HELIX 15 AB6 ILE B 292 HIS B 309 1 18 HELIX 16 AB7 VAL B 310 LYS B 314 5 5 HELIX 17 AB8 ASP B 317 LEU B 328 1 12 HELIX 18 AB9 GLU B 377 ASN B 383 1 7 HELIX 19 AC1 ARG B 403 LEU B 410 1 8 HELIX 20 AC2 ILE B 413 LEU B 431 1 19 SHEET 1 AA1 2 VAL A 150 SER A 151 0 SHEET 2 AA1 2 VAL A 169 TYR A 170 -1 O VAL A 169 N SER A 151 SHEET 1 AA2 4 PHE A 206 VAL A 210 0 SHEET 2 AA2 4 CYS A 278 ASP A 284 -1 O ALA A 282 N PHE A 206 SHEET 3 AA2 4 LEU A 225 GLN A 231 -1 N ASP A 230 O HIS A 279 SHEET 4 AA2 4 VAL A 256 PHE A 257 -1 O PHE A 257 N TYR A 227 SHEET 1 AA3 4 ASN A 215 ILE A 217 0 SHEET 2 AA3 4 THR A 271 ALA A 274 -1 O ALA A 272 N ILE A 217 SHEET 3 AA3 4 VAL A 234 LYS A 240 -1 N TYR A 237 O THR A 271 SHEET 4 AA3 4 LYS A 244 LEU A 251 -1 O LEU A 251 N VAL A 234 SHEET 1 AA4 4 LYS A 329 TYR A 333 0 SHEET 2 AA4 4 CYS A 396 ASP A 402 -1 O VAL A 398 N LYS A 331 SHEET 3 AA4 4 THR A 348 ASP A 354 -1 N ASP A 354 O GLN A 397 SHEET 4 AA4 4 TYR A 374 PHE A 375 -1 O PHE A 375 N PHE A 350 SHEET 1 AA5 4 ILE A 338 ILE A 340 0 SHEET 2 AA5 4 THR A 389 ALA A 392 -1 O ILE A 390 N ILE A 340 SHEET 3 AA5 4 ALA A 357 LYS A 361 -1 N SER A 360 O THR A 389 SHEET 4 AA5 4 LYS A 364 TYR A 369 -1 O LYS A 367 N ALA A 359 SHEET 1 AA6 2 VAL B 150 SER B 151 0 SHEET 2 AA6 2 VAL B 169 TYR B 170 -1 O VAL B 169 N SER B 151 SHEET 1 AA7 4 PHE B 206 VAL B 210 0 SHEET 2 AA7 4 CYS B 278 ASP B 284 -1 O ALA B 282 N PHE B 206 SHEET 3 AA7 4 LEU B 225 GLN B 231 -1 N ASP B 230 O HIS B 279 SHEET 4 AA7 4 VAL B 256 PHE B 257 -1 O PHE B 257 N TYR B 227 SHEET 1 AA8 4 ASN B 215 ILE B 217 0 SHEET 2 AA8 4 THR B 271 ALA B 274 -1 O ALA B 272 N ILE B 217 SHEET 3 AA8 4 VAL B 234 LYS B 240 -1 N TYR B 237 O THR B 271 SHEET 4 AA8 4 LYS B 244 LEU B 251 -1 O LEU B 251 N VAL B 234 SHEET 1 AA9 4 LYS B 329 TYR B 333 0 SHEET 2 AA9 4 CYS B 396 ASP B 402 -1 O CYS B 396 N TYR B 333 SHEET 3 AA9 4 THR B 348 ASP B 354 -1 N ILE B 351 O VAL B 399 SHEET 4 AA9 4 TYR B 374 PHE B 375 -1 O PHE B 375 N PHE B 350 SHEET 1 AB1 4 ILE B 338 ILE B 340 0 SHEET 2 AB1 4 THR B 389 ALA B 392 -1 O ILE B 390 N ILE B 339 SHEET 3 AB1 4 ALA B 357 LYS B 361 -1 N SER B 360 O THR B 389 SHEET 4 AB1 4 LYS B 364 TYR B 369 -1 O LYS B 367 N ALA B 359 SITE 1 AC1 12 ILE A 236 LEU A 248 PHE A 257 GLY A 258 SITE 2 AC1 12 GLU A 259 LEU A 260 ALA A 261 ARG A 268 SITE 3 AC1 12 ALA A 269 ALA A 270 ASP A 317 TYR A 319 SITE 1 AC2 14 ILE A 366 TYR A 369 PHE A 375 GLY A 376 SITE 2 AC2 14 GLU A 377 LEU A 378 ALA A 379 ARG A 386 SITE 3 AC2 14 ALA A 387 ALA A 388 ILE A 390 TYR A 424 SITE 4 AC2 14 LEU A 428 HOH A 616 SITE 1 AC3 15 ILE B 340 ILE B 366 TYR B 369 PHE B 375 SITE 2 AC3 15 GLY B 376 GLU B 377 LEU B 378 ALA B 379 SITE 3 AC3 15 ARG B 386 ALA B 387 ALA B 388 ILE B 390 SITE 4 AC3 15 TYR B 424 LEU B 428 HOH B 602 SITE 1 AC4 11 ILE B 236 LEU B 248 PHE B 257 GLY B 258 SITE 2 AC4 11 GLU B 259 LEU B 260 ALA B 261 ARG B 268 SITE 3 AC4 11 ALA B 269 ASP B 317 TYR B 319 CRYST1 78.726 103.797 104.236 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012702 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009634 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009594 0.00000