HEADER TRANSCRIPTION/DNA 09-JUN-16 5KE6 TITLE MOUSE KLF4 ZNF1-3 AND TPG/CPA SEQUENCE DNA COMPLEX STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: KRUEPPEL-LIKE FACTOR 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 396-483; COMPND 5 SYNONYM: EPITHELIAL ZINC FINGER PROTEIN EZF,GUT-ENRICHED KRUEPPEL- COMPND 6 LIKE FACTOR; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'-D(*GP*AP*GP*GP*TP*GP*TP*GP*GP*C)-3'); COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'-D(*GP*CP*CP*AP*CP*AP*CP*CP*TP*C)-3'); COMPND 14 CHAIN: C; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: KLF4, EZF, GKLF, ZIE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) CODON PLUS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PGEX-6P-1; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PXC1248; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630 KEYWDS KLF4, ZINC FINGER, KRUPPEL-LIKE FACTORS, TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.HASHIMOTO,X.CHENG REVDAT 6 27-SEP-23 5KE6 1 REMARK REVDAT 5 25-DEC-19 5KE6 1 REMARK REVDAT 4 20-SEP-17 5KE6 1 REMARK REVDAT 3 14-DEC-16 5KE6 1 JRNL REVDAT 2 21-SEP-16 5KE6 1 JRNL REVDAT 1 14-SEP-16 5KE6 0 JRNL AUTH H.HASHIMOTO,D.WANG,A.N.STEVES,P.JIN,R.M.BLUMENTHAL,X.ZHANG, JRNL AUTH 2 X.CHENG JRNL TITL DISTINCTIVE KLF4 MUTANTS DETERMINE PREFERENCE FOR DNA JRNL TITL 2 METHYLATION STATUS. JRNL REF NUCLEIC ACIDS RES. V. 44 10177 2016 JRNL REFN ESSN 1362-4962 JRNL PMID 27596594 JRNL DOI 10.1093/NAR/GKW774 REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2400: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.440 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 12416 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 622 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.6833 - 3.1582 0.99 3094 164 0.1700 0.2026 REMARK 3 2 3.1582 - 2.5070 1.00 2948 155 0.2250 0.2772 REMARK 3 3 2.5070 - 2.1902 1.00 2885 152 0.2289 0.2536 REMARK 3 4 2.1902 - 1.9899 1.00 2867 151 0.2654 0.2958 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1195 REMARK 3 ANGLE : 0.874 1674 REMARK 3 CHIRALITY : 0.040 170 REMARK 3 PLANARITY : 0.005 145 REMARK 3 DIHEDRAL : 25.440 614 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 399:427) REMARK 3 ORIGIN FOR THE GROUP (A): -26.3160 -36.8602 262.8873 REMARK 3 T TENSOR REMARK 3 T11: 0.3371 T22: 0.4586 REMARK 3 T33: 0.3708 T12: -0.1100 REMARK 3 T13: -0.0790 T23: 0.0769 REMARK 3 L TENSOR REMARK 3 L11: 3.0543 L22: 6.8262 REMARK 3 L33: 8.6627 L12: -4.3790 REMARK 3 L13: -2.8146 L23: 2.3430 REMARK 3 S TENSOR REMARK 3 S11: -0.1346 S12: 0.6547 S13: 0.6351 REMARK 3 S21: -0.1078 S22: 0.0060 S23: -0.6810 REMARK 3 S31: -0.1979 S32: 0.6544 S33: 0.0887 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 428:457) REMARK 3 ORIGIN FOR THE GROUP (A): -41.7697 -49.4253 272.1995 REMARK 3 T TENSOR REMARK 3 T11: 0.2627 T22: 0.3127 REMARK 3 T33: 0.2322 T12: -0.0184 REMARK 3 T13: -0.0338 T23: 0.0989 REMARK 3 L TENSOR REMARK 3 L11: 3.8014 L22: 6.0494 REMARK 3 L33: 7.0540 L12: 1.3026 REMARK 3 L13: -2.9944 L23: -1.4023 REMARK 3 S TENSOR REMARK 3 S11: -0.0343 S12: -0.3633 S13: -0.2872 REMARK 3 S21: 0.3537 S22: 0.1849 S23: 0.3576 REMARK 3 S31: -0.0120 S32: -0.3007 S33: -0.2129 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 458:483) REMARK 3 ORIGIN FOR THE GROUP (A): -27.6379 -63.4492 283.0868 REMARK 3 T TENSOR REMARK 3 T11: 0.4399 T22: 0.3971 REMARK 3 T33: 0.5015 T12: 0.1176 REMARK 3 T13: 0.0594 T23: 0.0717 REMARK 3 L TENSOR REMARK 3 L11: 3.8323 L22: 6.5886 REMARK 3 L33: 5.3338 L12: -2.0739 REMARK 3 L13: 1.5319 L23: -4.5413 REMARK 3 S TENSOR REMARK 3 S11: -0.3637 S12: -0.3973 S13: -1.0016 REMARK 3 S21: 0.5515 S22: 0.6965 S23: 0.9446 REMARK 3 S31: 0.0634 S32: -0.0862 S33: -0.2926 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN B AND RESID 1:10) REMARK 3 ORIGIN FOR THE GROUP (A): -26.4226 -49.4529 271.3599 REMARK 3 T TENSOR REMARK 3 T11: 0.3103 T22: 0.3580 REMARK 3 T33: 0.2026 T12: 0.0417 REMARK 3 T13: -0.0488 T23: 0.0361 REMARK 3 L TENSOR REMARK 3 L11: 1.9133 L22: 2.1940 REMARK 3 L33: 4.0823 L12: 0.0410 REMARK 3 L13: -0.1055 L23: 1.8838 REMARK 3 S TENSOR REMARK 3 S11: -0.1080 S12: 0.0175 S13: 0.0797 REMARK 3 S21: 0.2341 S22: 0.2808 S23: -0.1027 REMARK 3 S31: 0.2191 S32: 0.2818 S33: -0.1714 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN C AND RESID 1:10) REMARK 3 ORIGIN FOR THE GROUP (A): -26.0895 -50.9288 272.2980 REMARK 3 T TENSOR REMARK 3 T11: 0.3100 T22: 0.3606 REMARK 3 T33: 0.2425 T12: -0.0262 REMARK 3 T13: -0.0209 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 3.7654 L22: 5.4861 REMARK 3 L33: 3.8610 L12: 0.3119 REMARK 3 L13: 2.2678 L23: 3.4050 REMARK 3 S TENSOR REMARK 3 S11: 0.0157 S12: 0.2396 S13: -0.2281 REMARK 3 S21: 0.5605 S22: 0.3569 S23: -0.3489 REMARK 3 S31: 0.3820 S32: 0.3890 S33: -0.3613 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5KE6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1000221910. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12435 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 34.678 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.5800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.98200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.320 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4M9E REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL PH8.5 , 0.25M NACL AND REMARK 280 20% POLYETHYLENE GLYCOL 8000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.27000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 25.43500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 25.43500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 97.90500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 25.43500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 25.43500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 32.63500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 25.43500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 25.43500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 97.90500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 25.43500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 25.43500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 32.63500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 65.27000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 391 REMARK 465 PRO A 392 REMARK 465 LEU A 393 REMARK 465 GLY A 394 REMARK 465 SER A 395 REMARK 465 ARG A 396 REMARK 465 THR A 397 REMARK 465 ALA A 398 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 638 O HOH A 648 2.12 REMARK 500 O HOH A 649 O HOH B 118 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT B 5 O4' - C1' - N1 ANGL. DEV. = 3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 402 SG REMARK 620 2 CYS A 407 SG 115.3 REMARK 620 3 HIS A 420 NE2 110.7 103.4 REMARK 620 4 HIS A 424 NE2 111.6 114.8 99.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 432 SG REMARK 620 2 CYS A 437 SG 120.1 REMARK 620 3 HIS A 450 NE2 115.5 97.7 REMARK 620 4 HIS A 454 NE2 109.7 115.2 95.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 462 SG REMARK 620 2 CYS A 465 SG 113.8 REMARK 620 3 HIS A 478 NE2 121.8 98.9 REMARK 620 4 HIS A 482 NE2 111.7 115.9 92.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5KEA RELATED DB: PDB REMARK 900 RELATED ID: 5KE9 RELATED DB: PDB REMARK 900 RELATED ID: 5KEB RELATED DB: PDB REMARK 900 RELATED ID: 5K5I RELATED DB: PDB REMARK 900 RELATED ID: 5K5J RELATED DB: PDB REMARK 900 RELATED ID: 5K5L RELATED DB: PDB DBREF 5KE6 A 396 483 UNP Q60793 KLF4_MOUSE 396 483 DBREF 5KE6 B 1 10 PDB 5KE6 5KE6 1 10 DBREF 5KE6 C 1 10 PDB 5KE6 5KE6 1 10 SEQADV 5KE6 GLY A 391 UNP Q60793 EXPRESSION TAG SEQADV 5KE6 PRO A 392 UNP Q60793 EXPRESSION TAG SEQADV 5KE6 LEU A 393 UNP Q60793 EXPRESSION TAG SEQADV 5KE6 GLY A 394 UNP Q60793 EXPRESSION TAG SEQADV 5KE6 SER A 395 UNP Q60793 EXPRESSION TAG SEQRES 1 A 93 GLY PRO LEU GLY SER ARG THR ALA THR HIS THR CYS ASP SEQRES 2 A 93 TYR ALA GLY CYS GLY LYS THR TYR THR LYS SER SER HIS SEQRES 3 A 93 LEU LYS ALA HIS LEU ARG THR HIS THR GLY GLU LYS PRO SEQRES 4 A 93 TYR HIS CYS ASP TRP ASP GLY CYS GLY TRP LYS PHE ALA SEQRES 5 A 93 ARG SER ASP GLU LEU THR ARG HIS TYR ARG LYS HIS THR SEQRES 6 A 93 GLY HIS ARG PRO PHE GLN CYS GLN LYS CYS ASP ARG ALA SEQRES 7 A 93 PHE SER ARG SER ASP HIS LEU ALA LEU HIS MET LYS ARG SEQRES 8 A 93 HIS PHE SEQRES 1 B 10 DG DA DG DG DT DG DT DG DG DC SEQRES 1 C 10 DG DC DC DA DC DA DC DC DT DC HET ZN A 501 1 HET ZN A 502 1 HET ZN A 503 1 HETNAM ZN ZINC ION FORMUL 4 ZN 3(ZN 2+) FORMUL 7 HOH *81(H2 O) HELIX 1 AA1 LYS A 413 GLY A 426 1 14 HELIX 2 AA2 ARG A 443 GLY A 456 1 14 HELIX 3 AA3 ARG A 471 ARG A 481 1 11 SHEET 1 AA1 2 HIS A 400 THR A 401 0 SHEET 2 AA1 2 THR A 410 TYR A 411 -1 O TYR A 411 N HIS A 400 SHEET 1 AA2 2 TYR A 430 HIS A 431 0 SHEET 2 AA2 2 LYS A 440 PHE A 441 -1 O PHE A 441 N TYR A 430 SHEET 1 AA3 2 PHE A 460 GLN A 461 0 SHEET 2 AA3 2 ALA A 468 PHE A 469 -1 O PHE A 469 N PHE A 460 LINK SG CYS A 402 ZN ZN A 503 1555 1555 2.27 LINK SG CYS A 407 ZN ZN A 503 1555 1555 2.38 LINK NE2 HIS A 420 ZN ZN A 503 1555 1555 2.08 LINK NE2 HIS A 424 ZN ZN A 503 1555 1555 2.04 LINK SG CYS A 432 ZN ZN A 502 1555 1555 2.28 LINK SG CYS A 437 ZN ZN A 502 1555 1555 2.29 LINK NE2 HIS A 450 ZN ZN A 502 1555 1555 2.04 LINK NE2 HIS A 454 ZN ZN A 502 1555 1555 2.11 LINK SG CYS A 462 ZN ZN A 501 1555 1555 2.25 LINK SG CYS A 465 ZN ZN A 501 1555 1555 2.30 LINK NE2 HIS A 478 ZN ZN A 501 1555 1555 2.06 LINK NE2 HIS A 482 ZN ZN A 501 1555 1555 2.03 SITE 1 AC1 4 CYS A 462 CYS A 465 HIS A 478 HIS A 482 SITE 1 AC2 4 CYS A 432 CYS A 437 HIS A 450 HIS A 454 SITE 1 AC3 4 CYS A 402 CYS A 407 HIS A 420 HIS A 424 CRYST1 50.870 50.870 130.540 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019658 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019658 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007660 0.00000