HEADER DNA BINDING PROTEIN 09-JUN-16 5KEC TITLE STRUCTURE OF K. PNEUMONIA MRKH IN ITS APO STATE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAGELLAR BRAKE PROTEIN YCGR; COMPND 3 CHAIN: D, A; COMPND 4 SYNONYM: PUTATIVE GLYCOSYLTRANSFERASE,TYPE 3 FIMBRIAE TRANSCRIPTION COMPND 5 ACTIVATOR; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: CONTAINS N-TERMINAL GSH LEFTOVER FROM THROMBIN COMPND 8 CLEAVAGE AS A PET15B EXPRESSED PROTEIN. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 573; SOURCE 4 GENE: MRKH, YCGR, AOT21_03001, PMK1_00755; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MRKH, K. PNEUMONIA, BIOFILM, C-DI-GMP, TRANSFERASE, DNA BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.SCHUMACHER REVDAT 3 27-SEP-23 5KEC 1 REMARK REVDAT 2 01-NOV-17 5KEC 1 REMARK REVDAT 1 17-AUG-16 5KEC 0 JRNL AUTH M.SCHUMACHER JRNL TITL TO BE PUBLISHED: STRUCTURES OF K. PNEUMONIA MRKH: DUAL JRNL TITL 2 UTILIZATION OF THE PILZ FOLD FOR C-DI-GMP AND DNA BINDING BY JRNL TITL 3 A NOVEL ACTIVATOR OF BIOFILM GENES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.4_486 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.4 REMARK 3 NUMBER OF REFLECTIONS : 29115 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.870 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.5756 - 4.1979 0.97 3100 229 0.1924 0.1998 REMARK 3 2 4.1979 - 3.3324 0.99 3005 222 0.1788 0.2206 REMARK 3 3 3.3324 - 2.9113 0.97 2926 216 0.1970 0.2525 REMARK 3 4 2.9113 - 2.6451 0.94 2814 207 0.2189 0.2712 REMARK 3 5 2.6451 - 2.4556 0.92 2730 202 0.2119 0.2651 REMARK 3 6 2.4556 - 2.3108 0.89 2650 195 0.2182 0.3146 REMARK 3 7 2.3108 - 2.1951 0.87 2580 190 0.2252 0.2967 REMARK 3 8 2.1951 - 2.0995 0.88 2599 191 0.2242 0.2860 REMARK 3 9 2.0995 - 2.0187 0.84 2483 183 0.2548 0.2825 REMARK 3 10 2.0187 - 1.9490 0.76 2228 165 0.3038 0.3631 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.39 REMARK 3 B_SOL : 40.35 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.21680 REMARK 3 B22 (A**2) : -11.05760 REMARK 3 B33 (A**2) : 4.84090 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3828 REMARK 3 ANGLE : 0.799 5132 REMARK 3 CHIRALITY : 0.055 568 REMARK 3 PLANARITY : 0.002 656 REMARK 3 DIHEDRAL : 14.186 1470 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 0:6) REMARK 3 ORIGIN FOR THE GROUP (A): 43.7125 29.2543 -1.7235 REMARK 3 T TENSOR REMARK 3 T11: 0.2778 T22: 0.3005 REMARK 3 T33: 0.2239 T12: 0.0098 REMARK 3 T13: 0.0156 T23: -0.0620 REMARK 3 L TENSOR REMARK 3 L11: 0.0112 L22: 0.0048 REMARK 3 L33: -0.0017 L12: 0.0177 REMARK 3 L13: -0.0222 L23: 0.0077 REMARK 3 S TENSOR REMARK 3 S11: 0.2829 S12: 0.6258 S13: 0.3486 REMARK 3 S21: 0.6262 S22: -0.3253 S23: 0.1734 REMARK 3 S31: 0.2387 S32: 0.0536 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 7:54) REMARK 3 ORIGIN FOR THE GROUP (A): 25.9631 29.7264 11.9296 REMARK 3 T TENSOR REMARK 3 T11: 0.1344 T22: 0.1534 REMARK 3 T33: 0.1377 T12: -0.0296 REMARK 3 T13: 0.0051 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 0.1986 L22: 0.5142 REMARK 3 L33: 0.1212 L12: 0.0143 REMARK 3 L13: -0.2300 L23: 0.2614 REMARK 3 S TENSOR REMARK 3 S11: -0.0302 S12: 0.0818 S13: -0.0623 REMARK 3 S21: -0.0136 S22: 0.0443 S23: -0.0433 REMARK 3 S31: -0.0911 S32: -0.0805 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 55:108) REMARK 3 ORIGIN FOR THE GROUP (A): 25.3763 31.4614 18.0104 REMARK 3 T TENSOR REMARK 3 T11: 0.1920 T22: 0.1705 REMARK 3 T33: 0.2067 T12: -0.0273 REMARK 3 T13: 0.0662 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.3364 L22: 0.3872 REMARK 3 L33: 0.3214 L12: 0.3748 REMARK 3 L13: 0.0575 L23: 0.1478 REMARK 3 S TENSOR REMARK 3 S11: -0.0768 S12: -0.0883 S13: -0.0376 REMARK 3 S21: 0.0869 S22: -0.1004 S23: 0.0575 REMARK 3 S31: -0.1620 S32: 0.0276 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 109:120) REMARK 3 ORIGIN FOR THE GROUP (A): 40.9117 24.8488 32.1739 REMARK 3 T TENSOR REMARK 3 T11: 0.3044 T22: 0.2634 REMARK 3 T33: 0.3192 T12: -0.0128 REMARK 3 T13: -0.0500 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: -0.0244 L22: 0.1029 REMARK 3 L33: -0.0285 L12: 0.1787 REMARK 3 L13: 0.1316 L23: 0.0385 REMARK 3 S TENSOR REMARK 3 S11: -0.2334 S12: -0.0699 S13: -0.1066 REMARK 3 S21: -0.0088 S22: 0.2459 S23: -0.3039 REMARK 3 S31: 0.0179 S32: -0.1101 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 121:234) REMARK 3 ORIGIN FOR THE GROUP (A): 39.6233 33.8086 41.2780 REMARK 3 T TENSOR REMARK 3 T11: 0.1125 T22: 0.1386 REMARK 3 T33: 0.1104 T12: -0.0085 REMARK 3 T13: 0.0100 T23: -0.0125 REMARK 3 L TENSOR REMARK 3 L11: 0.6837 L22: 0.5929 REMARK 3 L33: 0.3666 L12: 0.4288 REMARK 3 L13: -0.1912 L23: 0.4877 REMARK 3 S TENSOR REMARK 3 S11: -0.0176 S12: 0.0276 S13: 0.0472 REMARK 3 S21: -0.0875 S22: 0.0313 S23: 0.0949 REMARK 3 S31: -0.0386 S32: 0.0217 S33: -0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN D AND RESID 5:37) REMARK 3 ORIGIN FOR THE GROUP (A): 33.7583 10.1209 36.9216 REMARK 3 T TENSOR REMARK 3 T11: 0.1888 T22: 0.1373 REMARK 3 T33: 0.1444 T12: -0.0346 REMARK 3 T13: 0.0213 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 0.4634 L22: 0.2901 REMARK 3 L33: 0.6860 L12: 0.1072 REMARK 3 L13: -0.7448 L23: -0.1784 REMARK 3 S TENSOR REMARK 3 S11: -0.1311 S12: -0.0009 S13: -0.1122 REMARK 3 S21: -0.0723 S22: 0.0658 S23: -0.1578 REMARK 3 S31: -0.0389 S32: 0.1438 S33: 0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN D AND RESID 38:65) REMARK 3 ORIGIN FOR THE GROUP (A): 24.8771 15.2544 39.4565 REMARK 3 T TENSOR REMARK 3 T11: 0.2019 T22: 0.1437 REMARK 3 T33: 0.2022 T12: -0.0183 REMARK 3 T13: 0.0130 T23: -0.0258 REMARK 3 L TENSOR REMARK 3 L11: 0.0729 L22: 0.1773 REMARK 3 L33: 0.1450 L12: -0.2641 REMARK 3 L13: -0.2561 L23: -0.0207 REMARK 3 S TENSOR REMARK 3 S11: -0.1288 S12: 0.0853 S13: 0.0177 REMARK 3 S21: -0.0005 S22: -0.0444 S23: 0.0706 REMARK 3 S31: -0.0066 S32: -0.0123 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN D AND RESID 66:115) REMARK 3 ORIGIN FOR THE GROUP (A): 28.5286 11.8250 33.6351 REMARK 3 T TENSOR REMARK 3 T11: 0.1550 T22: 0.1501 REMARK 3 T33: 0.1804 T12: -0.0442 REMARK 3 T13: 0.0282 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 0.6359 L22: 0.5473 REMARK 3 L33: 0.4838 L12: 0.1949 REMARK 3 L13: 0.1833 L23: 0.0883 REMARK 3 S TENSOR REMARK 3 S11: -0.0392 S12: 0.0094 S13: 0.0023 REMARK 3 S21: -0.0440 S22: -0.1038 S23: 0.1091 REMARK 3 S31: 0.1211 S32: 0.0032 S33: 0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN D AND RESID 116:184) REMARK 3 ORIGIN FOR THE GROUP (A): 10.6571 9.3085 12.4555 REMARK 3 T TENSOR REMARK 3 T11: 0.1277 T22: 0.1580 REMARK 3 T33: 0.1428 T12: -0.0196 REMARK 3 T13: 0.0346 T23: -0.0311 REMARK 3 L TENSOR REMARK 3 L11: 0.0721 L22: 0.9339 REMARK 3 L33: 0.6522 L12: 0.5606 REMARK 3 L13: -0.3714 L23: -0.1758 REMARK 3 S TENSOR REMARK 3 S11: 0.0447 S12: 0.1279 S13: 0.1616 REMARK 3 S21: 0.1865 S22: -0.0138 S23: 0.0985 REMARK 3 S31: 0.0668 S32: -0.0123 S33: 0.0000 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN D AND RESID 185:234) REMARK 3 ORIGIN FOR THE GROUP (A): 19.5126 9.0302 12.4484 REMARK 3 T TENSOR REMARK 3 T11: 0.1762 T22: 0.1294 REMARK 3 T33: 0.1500 T12: 0.0014 REMARK 3 T13: -0.0039 T23: 0.0123 REMARK 3 L TENSOR REMARK 3 L11: 0.5860 L22: 0.5162 REMARK 3 L33: 0.4507 L12: 0.2009 REMARK 3 L13: -0.0640 L23: 0.4863 REMARK 3 S TENSOR REMARK 3 S11: 0.0379 S12: -0.0590 S13: 0.0609 REMARK 3 S21: 0.1225 S22: 0.0102 S23: -0.0520 REMARK 3 S31: 0.0885 S32: 0.0044 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5KEC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1000222085. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.11587 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29115 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.949 REMARK 200 RESOLUTION RANGE LOW (A) : 45.571 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.4 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07300 REMARK 200 FOR THE DATA SET : 7.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.55100 REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5KED REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 600, 0.1 M HEPES PH 7.5, 50 MM REMARK 280 LITHIUM SULPHATE, 10% W/V GLYCEROL, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 103.20000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 103.20000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 22.40000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 46.72500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 22.40000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.72500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 103.20000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 22.40000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 46.72500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 103.20000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 22.40000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 46.72500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: MONOMER ACCORDING TO SIZE EXCLUSION CHROMATOGRPAHY AND REMARK 300 CROSSLINKING REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY D 0 REMARK 465 SER D 1 REMARK 465 HIS D 2 REMARK 465 MET D 3 REMARK 465 THR D 4 REMARK 465 SER D 87 REMARK 465 GLY D 88 REMARK 465 VAL D 89 REMARK 465 ASP D 90 REMARK 465 ASN D 193 REMARK 465 ALA D 194 REMARK 465 ASN D 195 REMARK 465 GLU D 196 REMARK 465 ARG D 235 REMARK 465 ILE D 236 REMARK 465 ALA A 194 REMARK 465 ASN A 195 REMARK 465 GLU A 196 REMARK 465 ARG A 235 REMARK 465 ILE A 236 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HIS A 118 O HOH A 301 1.96 REMARK 500 OE2 GLU D 199 OH TYR D 201 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU D 197 CD GLU D 197 OE2 0.077 REMARK 500 GLU A 197 CD GLU A 197 OE2 0.078 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN D 34 -123.42 63.10 REMARK 500 THR D 40 -158.87 -149.28 REMARK 500 ARG D 44 143.54 -170.75 REMARK 500 LYS D 63 98.24 -65.79 REMARK 500 ASP D 85 -159.94 -166.48 REMARK 500 LEU D 171 47.37 -107.81 REMARK 500 ALA D 172 -126.73 51.41 REMARK 500 GLU A 5 -57.65 -160.42 REMARK 500 ASN A 34 -110.97 57.38 REMARK 500 ARG A 44 139.67 -171.54 REMARK 500 ASP A 85 -166.49 -166.32 REMARK 500 LYS A 91 70.12 38.20 REMARK 500 ARG A 110 73.59 -103.36 REMARK 500 SER A 142 -167.61 -125.50 REMARK 500 ALA A 172 -120.17 47.18 REMARK 500 REMARK 500 REMARK: NULL DBREF 5KEC D 3 236 UNP G3FT00 G3FT00_KLEPN 1 234 DBREF 5KEC A 3 236 UNP G3FT00 G3FT00_KLEPN 1 234 SEQADV 5KEC GLY D 0 UNP G3FT00 EXPRESSION TAG SEQADV 5KEC SER D 1 UNP G3FT00 EXPRESSION TAG SEQADV 5KEC HIS D 2 UNP G3FT00 EXPRESSION TAG SEQADV 5KEC GLY A 0 UNP G3FT00 EXPRESSION TAG SEQADV 5KEC SER A 1 UNP G3FT00 EXPRESSION TAG SEQADV 5KEC HIS A 2 UNP G3FT00 EXPRESSION TAG SEQRES 1 D 237 GLY SER HIS MET THR GLU GLY THR ILE LYS THR SER LYS SEQRES 2 D 237 TYR GLU ILE ILE ALA ILE PHE ARG GLU GLU LEU ARG LYS SEQRES 3 D 237 ARG THR GLU ILE GLU ILE PHE PHE ASN ASN THR SER ILE SEQRES 4 D 237 ILE THR GLN LEU THR ARG VAL ASP PHE ALA GLU PHE HIS SEQRES 5 D 237 ILE GLN THR HIS ARG LYS ILE PRO SER GLY HIS LYS ILE SEQRES 6 D 237 ARG PHE LEU LEU HIS SER ASP SER GLY LYS ILE GLU PHE SEQRES 7 D 237 ASN ALA ALA LEU THR LYS HIS ASP ASN SER GLY VAL ASP SEQRES 8 D 237 LYS GLY ILE ARG TYR ALA PHE SER LEU PRO GLU CYS LEU SEQRES 9 D 237 GLN VAL VAL GLN ARG ARG ARG ASP PRO ARG PHE ARG LEU SEQRES 10 D 237 ARG HIS GLU HIS ASP PHE TYR CYS ARG GLY ARG HIS LYS SEQRES 11 D 237 ASN GLY GLU ASN TYR LEU PHE ASP ILE LYS ASP ILE SER SEQRES 12 D 237 ASP GLY GLY CYS ALA LEU MET THR LYS THR PRO ASN LEU SEQRES 13 D 237 LYS PHE LEU SER HIS ASN ALA LEU LEU LYS ASN ALA VAL SEQRES 14 D 237 LEU MET LEU ALA GLU TYR GLY GLU ILE THR ILE ASP LEU SEQRES 15 D 237 VAL VAL LYS ASN VAL ILE VAL ILE THR LEU ASP ASN ALA SEQRES 16 D 237 ASN GLU GLU SER GLU SER TYR TYR GLN ILE SER CYS GLN SEQRES 17 D 237 PHE LYS PHE ARG HIS LEU ASP ASP GLN ARG ARG ILE GLU SEQRES 18 D 237 LYS ILE LEU LEU ASP LEU ILE LEU GLU ALA LYS ARG LYS SEQRES 19 D 237 LYS ARG ILE SEQRES 1 A 237 GLY SER HIS MET THR GLU GLY THR ILE LYS THR SER LYS SEQRES 2 A 237 TYR GLU ILE ILE ALA ILE PHE ARG GLU GLU LEU ARG LYS SEQRES 3 A 237 ARG THR GLU ILE GLU ILE PHE PHE ASN ASN THR SER ILE SEQRES 4 A 237 ILE THR GLN LEU THR ARG VAL ASP PHE ALA GLU PHE HIS SEQRES 5 A 237 ILE GLN THR HIS ARG LYS ILE PRO SER GLY HIS LYS ILE SEQRES 6 A 237 ARG PHE LEU LEU HIS SER ASP SER GLY LYS ILE GLU PHE SEQRES 7 A 237 ASN ALA ALA LEU THR LYS HIS ASP ASN SER GLY VAL ASP SEQRES 8 A 237 LYS GLY ILE ARG TYR ALA PHE SER LEU PRO GLU CYS LEU SEQRES 9 A 237 GLN VAL VAL GLN ARG ARG ARG ASP PRO ARG PHE ARG LEU SEQRES 10 A 237 ARG HIS GLU HIS ASP PHE TYR CYS ARG GLY ARG HIS LYS SEQRES 11 A 237 ASN GLY GLU ASN TYR LEU PHE ASP ILE LYS ASP ILE SER SEQRES 12 A 237 ASP GLY GLY CYS ALA LEU MET THR LYS THR PRO ASN LEU SEQRES 13 A 237 LYS PHE LEU SER HIS ASN ALA LEU LEU LYS ASN ALA VAL SEQRES 14 A 237 LEU MET LEU ALA GLU TYR GLY GLU ILE THR ILE ASP LEU SEQRES 15 A 237 VAL VAL LYS ASN VAL ILE VAL ILE THR LEU ASP ASN ALA SEQRES 16 A 237 ASN GLU GLU SER GLU SER TYR TYR GLN ILE SER CYS GLN SEQRES 17 A 237 PHE LYS PHE ARG HIS LEU ASP ASP GLN ARG ARG ILE GLU SEQRES 18 A 237 LYS ILE LEU LEU ASP LEU ILE LEU GLU ALA LYS ARG LYS SEQRES 19 A 237 LYS ARG ILE FORMUL 3 HOH *150(H2 O) HELIX 1 AA1 SER D 11 LYS D 25 1 15 HELIX 2 AA2 ASN D 154 LEU D 158 5 5 HELIX 3 AA3 ALA D 172 TYR D 174 5 3 HELIX 4 AA4 HIS D 212 LYS D 231 1 20 HELIX 5 AA5 SER A 11 LYS A 25 1 15 HELIX 6 AA6 ASN A 154 LEU A 158 5 5 HELIX 7 AA7 ALA A 172 TYR A 174 5 3 HELIX 8 AA8 HIS A 212 LYS A 234 1 23 SHEET 1 AA112 THR D 7 LYS D 9 0 SHEET 2 AA112 LEU D 103 VAL D 106 -1 O LEU D 103 N LYS D 9 SHEET 3 AA112 GLY D 73 ALA D 79 -1 N GLU D 76 O GLN D 104 SHEET 4 AA112 ILE D 64 SER D 70 -1 N PHE D 66 O PHE D 77 SHEET 5 AA112 GLU D 28 PHE D 33 -1 N GLU D 30 O LEU D 67 SHEET 6 AA112 THR D 36 GLN D 41 -1 O THR D 40 N ILE D 29 SHEET 7 AA112 THR A 36 GLN A 41 -1 O SER A 37 N SER D 37 SHEET 8 AA112 GLU A 28 PHE A 33 -1 N ILE A 29 O THR A 40 SHEET 9 AA112 LYS A 63 SER A 70 -1 O LEU A 67 N GLU A 30 SHEET 10 AA112 GLY A 73 ASN A 86 -1 O PHE A 77 N PHE A 66 SHEET 11 AA112 LEU A 103 VAL A 106 -1 O VAL A 106 N LYS A 74 SHEET 12 AA112 ILE A 8 LYS A 9 -1 N LYS A 9 O LEU A 103 SHEET 1 AA213 THR D 7 LYS D 9 0 SHEET 2 AA213 LEU D 103 VAL D 106 -1 O LEU D 103 N LYS D 9 SHEET 3 AA213 GLY D 73 ALA D 79 -1 N GLU D 76 O GLN D 104 SHEET 4 AA213 ILE D 64 SER D 70 -1 N PHE D 66 O PHE D 77 SHEET 5 AA213 GLU D 28 PHE D 33 -1 N GLU D 30 O LEU D 67 SHEET 6 AA213 THR D 36 GLN D 41 -1 O THR D 40 N ILE D 29 SHEET 7 AA213 THR A 36 GLN A 41 -1 O SER A 37 N SER D 37 SHEET 8 AA213 GLU A 28 PHE A 33 -1 N ILE A 29 O THR A 40 SHEET 9 AA213 LYS A 63 SER A 70 -1 O LEU A 67 N GLU A 30 SHEET 10 AA213 GLY A 73 ASN A 86 -1 O PHE A 77 N PHE A 66 SHEET 11 AA213 ILE A 93 SER A 98 -1 O ALA A 96 N THR A 82 SHEET 12 AA213 GLU A 49 THR A 54 -1 N ILE A 52 O TYR A 95 SHEET 13 AA213 ARG A 44 VAL A 45 -1 N ARG A 44 O HIS A 51 SHEET 1 AA3 4 ARG D 44 VAL D 45 0 SHEET 2 AA3 4 GLU D 49 THR D 54 -1 O HIS D 51 N ARG D 44 SHEET 3 AA3 4 ILE D 93 SER D 98 -1 O TYR D 95 N ILE D 52 SHEET 4 AA3 4 LEU D 81 ASP D 85 -1 N THR D 82 O ALA D 96 SHEET 1 AA4 8 LEU D 116 ARG D 117 0 SHEET 2 AA4 8 ASN D 133 ILE D 141 -1 O ILE D 141 N LEU D 116 SHEET 3 AA4 8 GLY D 145 THR D 150 -1 O MET D 149 N ASP D 137 SHEET 4 AA4 8 GLU D 199 LYS D 209 -1 O CYS D 206 N CYS D 146 SHEET 5 AA4 8 GLU D 176 LEU D 191 -1 N ILE D 189 O TYR D 201 SHEET 6 AA4 8 LEU D 163 MET D 170 -1 N LEU D 164 O LEU D 181 SHEET 7 AA4 8 TYR D 123 ARG D 127 -1 N ARG D 125 O VAL D 168 SHEET 8 AA4 8 ASN D 133 ILE D 141 -1 O PHE D 136 N CYS D 124 SHEET 1 AA5 8 LEU A 116 ARG A 117 0 SHEET 2 AA5 8 ASN A 133 ILE A 141 -1 O ILE A 141 N LEU A 116 SHEET 3 AA5 8 GLY A 145 THR A 150 -1 O MET A 149 N ASP A 137 SHEET 4 AA5 8 GLU A 199 LYS A 209 -1 O ILE A 204 N LEU A 148 SHEET 5 AA5 8 GLU A 176 LEU A 191 -1 N ASN A 185 O SER A 205 SHEET 6 AA5 8 LEU A 163 MET A 170 -1 N ALA A 167 O ILE A 179 SHEET 7 AA5 8 TYR A 123 ARG A 127 -1 N ARG A 125 O VAL A 168 SHEET 8 AA5 8 ASN A 133 ILE A 141 -1 O TYR A 134 N GLY A 126 CRYST1 44.800 93.450 206.400 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022321 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010701 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004845 0.00000