data_5KEG # _entry.id 5KEG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5KEG pdb_00005keg 10.2210/pdb5keg/pdb WWPDB D_1000222031 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-05-10 2 'Structure model' 1 1 2017-09-13 3 'Structure model' 1 2 2019-12-25 4 'Structure model' 1 3 2023-09-27 5 'Structure model' 1 4 2024-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 3 'Structure model' 'Author supporting evidence' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 3 'Structure model' pdbx_audit_support 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 6 4 'Structure model' pdbx_initial_refinement_model 7 5 'Structure model' pdbx_entry_details 8 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 3 'Structure model' '_pdbx_audit_support.funding_organization' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5KEG _pdbx_database_status.recvd_initial_deposition_date 2016-06-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kouno, T.' 1 ? 'Hilbert, B.J.' 2 ? 'Silvas, T.' 3 ? 'Royer, W.E.' 4 ? 'Matsuo, H.' 5 ? 'Schiffer, C.A.' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 8 _citation.language ? _citation.page_first 15024 _citation.page_last 15024 _citation.title 'Crystal structure of APOBEC3A bound to single-stranded DNA reveals structural basis for cytidine deamination and specificity.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/ncomms15024 _citation.pdbx_database_id_PubMed 28452355 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kouno, T.' 1 ? primary 'Silvas, T.V.' 2 ? primary 'Hilbert, B.J.' 3 ? primary 'Shandilya, S.M.D.' 4 ? primary 'Bohn, M.F.' 5 ? primary 'Kelch, B.A.' 6 ? primary 'Royer, W.E.' 7 ? primary 'Somasundaran, M.' 8 ? primary 'Kurt Yilmaz, N.' 9 ? primary 'Matsuo, H.' 10 ? primary 'Schiffer, C.A.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA dC->dU-editing enzyme APOBEC-3A' 23300.281 1 3.5.4.- 'E72A, C171A' ? ? 2 polymer syn ;DNA (5'-D(*TP*TP*CP*TP*T)-3') ; 4502.923 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 4 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 6 water nat water 18.015 100 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name A3A,Phorbolin-1 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPGHMEASPASGPRHLMDPHIFTSNFNNGIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAKNLLCGFYGRHAALRFL DLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYD EFKHCWDTFVDHQGAPFQPWDGLDEHSQALSGRLRAILQNQGN ; ;GPGHMEASPASGPRHLMDPHIFTSNFNNGIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAKNLLCGFYGRHAALRFL DLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYD EFKHCWDTFVDHQGAPFQPWDGLDEHSQALSGRLRAILQNQGN ; A ? 2 polydeoxyribonucleotide no no '(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DC)(DT)(DT)(DT)(DT)(DT)(DT)' TTTTTTTTCTTTTTT B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 'CALCIUM ION' CA 5 'CHLORIDE ION' CL 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLY n 1 4 HIS n 1 5 MET n 1 6 GLU n 1 7 ALA n 1 8 SER n 1 9 PRO n 1 10 ALA n 1 11 SER n 1 12 GLY n 1 13 PRO n 1 14 ARG n 1 15 HIS n 1 16 LEU n 1 17 MET n 1 18 ASP n 1 19 PRO n 1 20 HIS n 1 21 ILE n 1 22 PHE n 1 23 THR n 1 24 SER n 1 25 ASN n 1 26 PHE n 1 27 ASN n 1 28 ASN n 1 29 GLY n 1 30 ILE n 1 31 GLY n 1 32 ARG n 1 33 HIS n 1 34 LYS n 1 35 THR n 1 36 TYR n 1 37 LEU n 1 38 CYS n 1 39 TYR n 1 40 GLU n 1 41 VAL n 1 42 GLU n 1 43 ARG n 1 44 LEU n 1 45 ASP n 1 46 ASN n 1 47 GLY n 1 48 THR n 1 49 SER n 1 50 VAL n 1 51 LYS n 1 52 MET n 1 53 ASP n 1 54 GLN n 1 55 HIS n 1 56 ARG n 1 57 GLY n 1 58 PHE n 1 59 LEU n 1 60 HIS n 1 61 ASN n 1 62 GLN n 1 63 ALA n 1 64 LYS n 1 65 ASN n 1 66 LEU n 1 67 LEU n 1 68 CYS n 1 69 GLY n 1 70 PHE n 1 71 TYR n 1 72 GLY n 1 73 ARG n 1 74 HIS n 1 75 ALA n 1 76 ALA n 1 77 LEU n 1 78 ARG n 1 79 PHE n 1 80 LEU n 1 81 ASP n 1 82 LEU n 1 83 VAL n 1 84 PRO n 1 85 SER n 1 86 LEU n 1 87 GLN n 1 88 LEU n 1 89 ASP n 1 90 PRO n 1 91 ALA n 1 92 GLN n 1 93 ILE n 1 94 TYR n 1 95 ARG n 1 96 VAL n 1 97 THR n 1 98 TRP n 1 99 PHE n 1 100 ILE n 1 101 SER n 1 102 TRP n 1 103 SER n 1 104 PRO n 1 105 CYS n 1 106 PHE n 1 107 SER n 1 108 TRP n 1 109 GLY n 1 110 CYS n 1 111 ALA n 1 112 GLY n 1 113 GLU n 1 114 VAL n 1 115 ARG n 1 116 ALA n 1 117 PHE n 1 118 LEU n 1 119 GLN n 1 120 GLU n 1 121 ASN n 1 122 THR n 1 123 HIS n 1 124 VAL n 1 125 ARG n 1 126 LEU n 1 127 ARG n 1 128 ILE n 1 129 PHE n 1 130 ALA n 1 131 ALA n 1 132 ARG n 1 133 ILE n 1 134 TYR n 1 135 ASP n 1 136 TYR n 1 137 ASP n 1 138 PRO n 1 139 LEU n 1 140 TYR n 1 141 LYS n 1 142 GLU n 1 143 ALA n 1 144 LEU n 1 145 GLN n 1 146 MET n 1 147 LEU n 1 148 ARG n 1 149 ASP n 1 150 ALA n 1 151 GLY n 1 152 ALA n 1 153 GLN n 1 154 VAL n 1 155 SER n 1 156 ILE n 1 157 MET n 1 158 THR n 1 159 TYR n 1 160 ASP n 1 161 GLU n 1 162 PHE n 1 163 LYS n 1 164 HIS n 1 165 CYS n 1 166 TRP n 1 167 ASP n 1 168 THR n 1 169 PHE n 1 170 VAL n 1 171 ASP n 1 172 HIS n 1 173 GLN n 1 174 GLY n 1 175 ALA n 1 176 PRO n 1 177 PHE n 1 178 GLN n 1 179 PRO n 1 180 TRP n 1 181 ASP n 1 182 GLY n 1 183 LEU n 1 184 ASP n 1 185 GLU n 1 186 HIS n 1 187 SER n 1 188 GLN n 1 189 ALA n 1 190 LEU n 1 191 SER n 1 192 GLY n 1 193 ARG n 1 194 LEU n 1 195 ARG n 1 196 ALA n 1 197 ILE n 1 198 LEU n 1 199 GLN n 1 200 ASN n 1 201 GLN n 1 202 GLY n 1 203 ASN n 2 1 DT n 2 2 DT n 2 3 DT n 2 4 DT n 2 5 DT n 2 6 DT n 2 7 DT n 2 8 DT n 2 9 DC n 2 10 DT n 2 11 DT n 2 12 DT n 2 13 DT n 2 14 DT n 2 15 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 203 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene APOBEC3A _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 15 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -3 ? ? ? A . n A 1 2 PRO 2 -2 ? ? ? A . n A 1 3 GLY 3 -1 ? ? ? A . n A 1 4 HIS 4 0 ? ? ? A . n A 1 5 MET 5 1 ? ? ? A . n A 1 6 GLU 6 2 ? ? ? A . n A 1 7 ALA 7 3 ? ? ? A . n A 1 8 SER 8 4 ? ? ? A . n A 1 9 PRO 9 5 ? ? ? A . n A 1 10 ALA 10 6 ? ? ? A . n A 1 11 SER 11 7 ? ? ? A . n A 1 12 GLY 12 8 ? ? ? A . n A 1 13 PRO 13 9 ? ? ? A . n A 1 14 ARG 14 10 10 ARG ARG A . n A 1 15 HIS 15 11 11 HIS HIS A . n A 1 16 LEU 16 12 12 LEU LEU A . n A 1 17 MET 17 13 13 MET MET A . n A 1 18 ASP 18 14 14 ASP ASP A . n A 1 19 PRO 19 15 15 PRO PRO A . n A 1 20 HIS 20 16 16 HIS HIS A . n A 1 21 ILE 21 17 17 ILE ILE A . n A 1 22 PHE 22 18 18 PHE PHE A . n A 1 23 THR 23 19 19 THR THR A . n A 1 24 SER 24 20 20 SER SER A . n A 1 25 ASN 25 21 21 ASN ASN A . n A 1 26 PHE 26 22 22 PHE PHE A . n A 1 27 ASN 27 23 23 ASN ASN A . n A 1 28 ASN 28 24 24 ASN ASN A . n A 1 29 GLY 29 25 25 GLY GLY A . n A 1 30 ILE 30 26 26 ILE ILE A . n A 1 31 GLY 31 27 27 GLY GLY A . n A 1 32 ARG 32 28 28 ARG ARG A . n A 1 33 HIS 33 29 29 HIS HIS A . n A 1 34 LYS 34 30 30 LYS LYS A . n A 1 35 THR 35 31 31 THR THR A . n A 1 36 TYR 36 32 32 TYR TYR A . n A 1 37 LEU 37 33 33 LEU LEU A . n A 1 38 CYS 38 34 34 CYS CYS A . n A 1 39 TYR 39 35 35 TYR TYR A . n A 1 40 GLU 40 36 36 GLU GLU A . n A 1 41 VAL 41 37 37 VAL VAL A . n A 1 42 GLU 42 38 38 GLU GLU A . n A 1 43 ARG 43 39 39 ARG ARG A . n A 1 44 LEU 44 40 40 LEU LEU A . n A 1 45 ASP 45 41 41 ASP ASP A . n A 1 46 ASN 46 42 42 ASN ASN A . n A 1 47 GLY 47 43 43 GLY GLY A . n A 1 48 THR 48 44 44 THR THR A . n A 1 49 SER 49 45 45 SER SER A . n A 1 50 VAL 50 46 46 VAL VAL A . n A 1 51 LYS 51 47 47 LYS LYS A . n A 1 52 MET 52 48 48 MET MET A . n A 1 53 ASP 53 49 49 ASP ASP A . n A 1 54 GLN 54 50 50 GLN GLN A . n A 1 55 HIS 55 51 51 HIS HIS A . n A 1 56 ARG 56 52 52 ARG ARG A . n A 1 57 GLY 57 53 53 GLY GLY A . n A 1 58 PHE 58 54 54 PHE PHE A . n A 1 59 LEU 59 55 55 LEU LEU A . n A 1 60 HIS 60 56 56 HIS HIS A . n A 1 61 ASN 61 57 57 ASN ASN A . n A 1 62 GLN 62 58 58 GLN GLN A . n A 1 63 ALA 63 59 59 ALA ALA A . n A 1 64 LYS 64 60 60 LYS LYS A . n A 1 65 ASN 65 61 61 ASN ASN A . n A 1 66 LEU 66 62 62 LEU LEU A . n A 1 67 LEU 67 63 63 LEU LEU A . n A 1 68 CYS 68 64 64 CYS CYS A . n A 1 69 GLY 69 65 65 GLY GLY A . n A 1 70 PHE 70 66 66 PHE PHE A . n A 1 71 TYR 71 67 67 TYR TYR A . n A 1 72 GLY 72 68 68 GLY GLY A . n A 1 73 ARG 73 69 69 ARG ARG A . n A 1 74 HIS 74 70 70 HIS HIS A . n A 1 75 ALA 75 71 71 ALA ALA A . n A 1 76 ALA 76 72 72 ALA ALA A . n A 1 77 LEU 77 73 73 LEU LEU A . n A 1 78 ARG 78 74 74 ARG ARG A . n A 1 79 PHE 79 75 75 PHE PHE A . n A 1 80 LEU 80 76 76 LEU LEU A . n A 1 81 ASP 81 77 77 ASP ASP A . n A 1 82 LEU 82 78 78 LEU LEU A . n A 1 83 VAL 83 79 79 VAL VAL A . n A 1 84 PRO 84 80 80 PRO PRO A . n A 1 85 SER 85 81 81 SER SER A . n A 1 86 LEU 86 82 82 LEU LEU A . n A 1 87 GLN 87 83 83 GLN GLN A . n A 1 88 LEU 88 84 84 LEU LEU A . n A 1 89 ASP 89 85 85 ASP ASP A . n A 1 90 PRO 90 86 86 PRO PRO A . n A 1 91 ALA 91 87 87 ALA ALA A . n A 1 92 GLN 92 88 88 GLN GLN A . n A 1 93 ILE 93 89 89 ILE ILE A . n A 1 94 TYR 94 90 90 TYR TYR A . n A 1 95 ARG 95 91 91 ARG ARG A . n A 1 96 VAL 96 92 92 VAL VAL A . n A 1 97 THR 97 93 93 THR THR A . n A 1 98 TRP 98 94 94 TRP TRP A . n A 1 99 PHE 99 95 95 PHE PHE A . n A 1 100 ILE 100 96 96 ILE ILE A . n A 1 101 SER 101 97 97 SER SER A . n A 1 102 TRP 102 98 98 TRP TRP A . n A 1 103 SER 103 99 99 SER SER A . n A 1 104 PRO 104 100 100 PRO PRO A . n A 1 105 CYS 105 101 101 CYS CYS A . n A 1 106 PHE 106 102 102 PHE PHE A . n A 1 107 SER 107 103 103 SER SER A . n A 1 108 TRP 108 104 104 TRP TRP A . n A 1 109 GLY 109 105 105 GLY GLY A . n A 1 110 CYS 110 106 106 CYS CYS A . n A 1 111 ALA 111 107 107 ALA ALA A . n A 1 112 GLY 112 108 108 GLY GLY A . n A 1 113 GLU 113 109 109 GLU GLU A . n A 1 114 VAL 114 110 110 VAL VAL A . n A 1 115 ARG 115 111 111 ARG ARG A . n A 1 116 ALA 116 112 112 ALA ALA A . n A 1 117 PHE 117 113 113 PHE PHE A . n A 1 118 LEU 118 114 114 LEU LEU A . n A 1 119 GLN 119 115 115 GLN GLN A . n A 1 120 GLU 120 116 116 GLU GLU A . n A 1 121 ASN 121 117 117 ASN ASN A . n A 1 122 THR 122 118 118 THR THR A . n A 1 123 HIS 123 119 119 HIS HIS A . n A 1 124 VAL 124 120 120 VAL VAL A . n A 1 125 ARG 125 121 121 ARG ARG A . n A 1 126 LEU 126 122 122 LEU LEU A . n A 1 127 ARG 127 123 123 ARG ARG A . n A 1 128 ILE 128 124 124 ILE ILE A . n A 1 129 PHE 129 125 125 PHE PHE A . n A 1 130 ALA 130 126 126 ALA ALA A . n A 1 131 ALA 131 127 127 ALA ALA A . n A 1 132 ARG 132 128 128 ARG ARG A . n A 1 133 ILE 133 129 129 ILE ILE A . n A 1 134 TYR 134 130 130 TYR TYR A . n A 1 135 ASP 135 131 131 ASP ASP A . n A 1 136 TYR 136 132 132 TYR TYR A . n A 1 137 ASP 137 133 133 ASP ASP A . n A 1 138 PRO 138 134 134 PRO PRO A . n A 1 139 LEU 139 135 135 LEU LEU A . n A 1 140 TYR 140 136 136 TYR TYR A . n A 1 141 LYS 141 137 137 LYS LYS A . n A 1 142 GLU 142 138 138 GLU GLU A . n A 1 143 ALA 143 139 139 ALA ALA A . n A 1 144 LEU 144 140 140 LEU LEU A . n A 1 145 GLN 145 141 141 GLN GLN A . n A 1 146 MET 146 142 142 MET MET A . n A 1 147 LEU 147 143 143 LEU LEU A . n A 1 148 ARG 148 144 144 ARG ARG A . n A 1 149 ASP 149 145 145 ASP ASP A . n A 1 150 ALA 150 146 146 ALA ALA A . n A 1 151 GLY 151 147 147 GLY GLY A . n A 1 152 ALA 152 148 148 ALA ALA A . n A 1 153 GLN 153 149 149 GLN GLN A . n A 1 154 VAL 154 150 150 VAL VAL A . n A 1 155 SER 155 151 151 SER SER A . n A 1 156 ILE 156 152 152 ILE ILE A . n A 1 157 MET 157 153 153 MET MET A . n A 1 158 THR 158 154 154 THR THR A . n A 1 159 TYR 159 155 155 TYR TYR A . n A 1 160 ASP 160 156 156 ASP ASP A . n A 1 161 GLU 161 157 157 GLU GLU A . n A 1 162 PHE 162 158 158 PHE PHE A . n A 1 163 LYS 163 159 159 LYS LYS A . n A 1 164 HIS 164 160 160 HIS HIS A . n A 1 165 CYS 165 161 161 CYS CYS A . n A 1 166 TRP 166 162 162 TRP TRP A . n A 1 167 ASP 167 163 163 ASP ASP A . n A 1 168 THR 168 164 164 THR THR A . n A 1 169 PHE 169 165 165 PHE PHE A . n A 1 170 VAL 170 166 166 VAL VAL A . n A 1 171 ASP 171 167 167 ASP ASP A . n A 1 172 HIS 172 168 168 HIS HIS A . n A 1 173 GLN 173 169 169 GLN GLN A . n A 1 174 GLY 174 170 170 GLY GLY A . n A 1 175 ALA 175 171 171 ALA ALA A . n A 1 176 PRO 176 172 172 PRO PRO A . n A 1 177 PHE 177 173 173 PHE PHE A . n A 1 178 GLN 178 174 174 GLN GLN A . n A 1 179 PRO 179 175 175 PRO PRO A . n A 1 180 TRP 180 176 176 TRP TRP A . n A 1 181 ASP 181 177 177 ASP ASP A . n A 1 182 GLY 182 178 178 GLY GLY A . n A 1 183 LEU 183 179 179 LEU LEU A . n A 1 184 ASP 184 180 180 ASP ASP A . n A 1 185 GLU 185 181 181 GLU GLU A . n A 1 186 HIS 186 182 182 HIS HIS A . n A 1 187 SER 187 183 183 SER SER A . n A 1 188 GLN 188 184 184 GLN GLN A . n A 1 189 ALA 189 185 185 ALA ALA A . n A 1 190 LEU 190 186 186 LEU LEU A . n A 1 191 SER 191 187 187 SER SER A . n A 1 192 GLY 192 188 188 GLY GLY A . n A 1 193 ARG 193 189 189 ARG ARG A . n A 1 194 LEU 194 190 190 LEU LEU A . n A 1 195 ARG 195 191 191 ARG ARG A . n A 1 196 ALA 196 192 192 ALA ALA A . n A 1 197 ILE 197 193 193 ILE ILE A . n A 1 198 LEU 198 194 194 LEU LEU A . n A 1 199 GLN 199 195 195 GLN GLN A . n A 1 200 ASN 200 196 196 ASN ASN A . n A 1 201 GLN 201 197 ? ? ? A . n A 1 202 GLY 202 198 ? ? ? A . n A 1 203 ASN 203 199 ? ? ? A . n B 2 1 DT 1 -5 ? ? ? B . n B 2 2 DT 2 -4 ? ? ? B . n B 2 3 DT 3 -3 ? ? ? B . n B 2 4 DT 4 -2 ? ? ? B . n B 2 5 DT 5 -1 ? ? ? B . n B 2 6 DT 6 0 ? ? ? B . n B 2 7 DT 7 1 1 DT DT B . n B 2 8 DT 8 2 2 DT DT B . n B 2 9 DC 9 3 3 DC DC B . n B 2 10 DT 10 4 4 DT DT B . n B 2 11 DT 11 5 5 DT DT B . n B 2 12 DT 12 6 ? ? ? B . n B 2 13 DT 13 7 ? ? ? B . n B 2 14 DT 14 8 ? ? ? B . n B 2 15 DT 15 9 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 201 1 ZN ZN A . D 4 CA 1 202 1 CA CA A . E 5 CL 1 203 1 CL CL A . F 6 HOH 1 301 27 HOH HOH A . F 6 HOH 2 302 57 HOH HOH A . F 6 HOH 3 303 21 HOH HOH A . F 6 HOH 4 304 15 HOH HOH A . F 6 HOH 5 305 79 HOH HOH A . F 6 HOH 6 306 30 HOH HOH A . F 6 HOH 7 307 14 HOH HOH A . F 6 HOH 8 308 89 HOH HOH A . F 6 HOH 9 309 86 HOH HOH A . F 6 HOH 10 310 25 HOH HOH A . F 6 HOH 11 311 70 HOH HOH A . F 6 HOH 12 312 45 HOH HOH A . F 6 HOH 13 313 44 HOH HOH A . F 6 HOH 14 314 90 HOH HOH A . F 6 HOH 15 315 58 HOH HOH A . F 6 HOH 16 316 26 HOH HOH A . F 6 HOH 17 317 63 HOH HOH A . F 6 HOH 18 318 87 HOH HOH A . F 6 HOH 19 319 7 HOH HOH A . F 6 HOH 20 320 6 HOH HOH A . F 6 HOH 21 321 3 HOH HOH A . F 6 HOH 22 322 13 HOH HOH A . F 6 HOH 23 323 18 HOH HOH A . F 6 HOH 24 324 43 HOH HOH A . F 6 HOH 25 325 23 HOH HOH A . F 6 HOH 26 326 73 HOH HOH A . F 6 HOH 27 327 4 HOH HOH A . F 6 HOH 28 328 85 HOH HOH A . F 6 HOH 29 329 10 HOH HOH A . F 6 HOH 30 330 41 HOH HOH A . F 6 HOH 31 331 2 HOH HOH A . F 6 HOH 32 332 33 HOH HOH A . F 6 HOH 33 333 76 HOH HOH A . F 6 HOH 34 334 24 HOH HOH A . F 6 HOH 35 335 93 HOH HOH A . F 6 HOH 36 336 94 HOH HOH A . F 6 HOH 37 337 35 HOH HOH A . F 6 HOH 38 338 84 HOH HOH A . F 6 HOH 39 339 68 HOH HOH A . F 6 HOH 40 340 38 HOH HOH A . F 6 HOH 41 341 42 HOH HOH A . F 6 HOH 42 342 1 HOH HOH A . F 6 HOH 43 343 5 HOH HOH A . F 6 HOH 44 344 66 HOH HOH A . F 6 HOH 45 345 8 HOH HOH A . F 6 HOH 46 346 72 HOH HOH A . F 6 HOH 47 347 46 HOH HOH A . F 6 HOH 48 348 22 HOH HOH A . F 6 HOH 49 349 19 HOH HOH A . F 6 HOH 50 350 20 HOH HOH A . F 6 HOH 51 351 77 HOH HOH A . F 6 HOH 52 352 32 HOH HOH A . F 6 HOH 53 353 100 HOH HOH A . F 6 HOH 54 354 39 HOH HOH A . F 6 HOH 55 355 11 HOH HOH A . F 6 HOH 56 356 36 HOH HOH A . F 6 HOH 57 357 28 HOH HOH A . F 6 HOH 58 358 12 HOH HOH A . F 6 HOH 59 359 59 HOH HOH A . F 6 HOH 60 360 96 HOH HOH A . F 6 HOH 61 361 74 HOH HOH A . F 6 HOH 62 362 64 HOH HOH A . F 6 HOH 63 363 49 HOH HOH A . F 6 HOH 64 364 40 HOH HOH A . F 6 HOH 65 365 61 HOH HOH A . F 6 HOH 66 366 71 HOH HOH A . F 6 HOH 67 367 54 HOH HOH A . F 6 HOH 68 368 16 HOH HOH A . F 6 HOH 69 369 98 HOH HOH A . F 6 HOH 70 370 52 HOH HOH A . F 6 HOH 71 371 50 HOH HOH A . F 6 HOH 72 372 60 HOH HOH A . F 6 HOH 73 373 37 HOH HOH A . F 6 HOH 74 374 92 HOH HOH A . F 6 HOH 75 375 9 HOH HOH A . F 6 HOH 76 376 55 HOH HOH A . F 6 HOH 77 377 34 HOH HOH A . F 6 HOH 78 378 62 HOH HOH A . F 6 HOH 79 379 48 HOH HOH A . F 6 HOH 80 380 88 HOH HOH A . F 6 HOH 81 381 80 HOH HOH A . F 6 HOH 82 382 82 HOH HOH A . F 6 HOH 83 383 53 HOH HOH A . F 6 HOH 84 384 47 HOH HOH A . F 6 HOH 85 385 95 HOH HOH A . F 6 HOH 86 386 75 HOH HOH A . F 6 HOH 87 387 97 HOH HOH A . F 6 HOH 88 388 83 HOH HOH A . F 6 HOH 89 389 69 HOH HOH A . F 6 HOH 90 390 65 HOH HOH A . F 6 HOH 91 391 56 HOH HOH A . F 6 HOH 92 392 91 HOH HOH A . F 6 HOH 93 393 81 HOH HOH A . F 6 HOH 94 394 51 HOH HOH A . F 6 HOH 95 395 78 HOH HOH A . F 6 HOH 96 396 31 HOH HOH A . F 6 HOH 97 397 67 HOH HOH A . F 6 HOH 98 398 99 HOH HOH A . G 6 HOH 1 101 29 HOH HOH B . G 6 HOH 2 102 17 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 10 ? CG ? A ARG 14 CG 2 1 Y 1 A ARG 10 ? CD ? A ARG 14 CD 3 1 Y 1 A ARG 10 ? NE ? A ARG 14 NE 4 1 Y 1 A ARG 10 ? CZ ? A ARG 14 CZ 5 1 Y 1 A ARG 10 ? NH1 ? A ARG 14 NH1 6 1 Y 1 A ARG 10 ? NH2 ? A ARG 14 NH2 7 1 Y 1 A HIS 11 ? CG ? A HIS 15 CG 8 1 Y 1 A HIS 11 ? ND1 ? A HIS 15 ND1 9 1 Y 1 A HIS 11 ? CD2 ? A HIS 15 CD2 10 1 Y 1 A HIS 11 ? CE1 ? A HIS 15 CE1 11 1 Y 1 A HIS 11 ? NE2 ? A HIS 15 NE2 12 1 Y 1 A HIS 16 ? CG ? A HIS 20 CG 13 1 Y 1 A HIS 16 ? ND1 ? A HIS 20 ND1 14 1 Y 1 A HIS 16 ? CD2 ? A HIS 20 CD2 15 1 Y 1 A HIS 16 ? CE1 ? A HIS 20 CE1 16 1 Y 1 A HIS 16 ? NE2 ? A HIS 20 NE2 17 1 Y 1 A LYS 30 ? CG ? A LYS 34 CG 18 1 Y 1 A LYS 30 ? CD ? A LYS 34 CD 19 1 Y 1 A LYS 30 ? CE ? A LYS 34 CE 20 1 Y 1 A LYS 30 ? NZ ? A LYS 34 NZ 21 1 Y 1 A ASN 42 ? CG ? A ASN 46 CG 22 1 Y 1 A ASN 42 ? OD1 ? A ASN 46 OD1 23 1 Y 1 A ASN 42 ? ND2 ? A ASN 46 ND2 24 1 Y 1 A VAL 46 ? CG1 ? A VAL 50 CG1 25 1 Y 1 A VAL 46 ? CG2 ? A VAL 50 CG2 26 1 Y 1 A LYS 47 ? CG ? A LYS 51 CG 27 1 Y 1 A LYS 47 ? CD ? A LYS 51 CD 28 1 Y 1 A LYS 47 ? CE ? A LYS 51 CE 29 1 Y 1 A LYS 47 ? NZ ? A LYS 51 NZ 30 1 Y 1 A GLN 50 ? CG ? A GLN 54 CG 31 1 Y 1 A GLN 50 ? CD ? A GLN 54 CD 32 1 Y 1 A GLN 50 ? OE1 ? A GLN 54 OE1 33 1 Y 1 A GLN 50 ? NE2 ? A GLN 54 NE2 34 1 Y 1 A GLN 58 ? CG ? A GLN 62 CG 35 1 Y 1 A GLN 58 ? CD ? A GLN 62 CD 36 1 Y 1 A GLN 58 ? OE1 ? A GLN 62 OE1 37 1 Y 1 A GLN 58 ? NE2 ? A GLN 62 NE2 38 1 Y 1 A LYS 60 ? CG ? A LYS 64 CG 39 1 Y 1 A LYS 60 ? CD ? A LYS 64 CD 40 1 Y 1 A LYS 60 ? CE ? A LYS 64 CE 41 1 Y 1 A LYS 60 ? NZ ? A LYS 64 NZ 42 1 Y 1 A LEU 62 ? CG ? A LEU 66 CG 43 1 Y 1 A LEU 62 ? CD1 ? A LEU 66 CD1 44 1 Y 1 A LEU 62 ? CD2 ? A LEU 66 CD2 45 1 Y 1 A LEU 63 ? CG ? A LEU 67 CG 46 1 Y 1 A LEU 63 ? CD1 ? A LEU 67 CD1 47 1 Y 1 A LEU 63 ? CD2 ? A LEU 67 CD2 48 1 Y 1 A PHE 66 ? CG ? A PHE 70 CG 49 1 Y 1 A PHE 66 ? CD1 ? A PHE 70 CD1 50 1 Y 1 A PHE 66 ? CD2 ? A PHE 70 CD2 51 1 Y 1 A PHE 66 ? CE1 ? A PHE 70 CE1 52 1 Y 1 A PHE 66 ? CE2 ? A PHE 70 CE2 53 1 Y 1 A PHE 66 ? CZ ? A PHE 70 CZ 54 1 Y 1 A TYR 67 ? CG ? A TYR 71 CG 55 1 Y 1 A TYR 67 ? CD1 ? A TYR 71 CD1 56 1 Y 1 A TYR 67 ? CD2 ? A TYR 71 CD2 57 1 Y 1 A TYR 67 ? CE1 ? A TYR 71 CE1 58 1 Y 1 A TYR 67 ? CE2 ? A TYR 71 CE2 59 1 Y 1 A TYR 67 ? CZ ? A TYR 71 CZ 60 1 Y 1 A TYR 67 ? OH ? A TYR 71 OH 61 1 Y 1 A ASP 177 ? CG ? A ASP 181 CG 62 1 Y 1 A ASP 177 ? OD1 ? A ASP 181 OD1 63 1 Y 1 A ASP 177 ? OD2 ? A ASP 181 OD2 64 1 Y 1 A GLU 181 ? CG ? A GLU 185 CG 65 1 Y 1 A GLU 181 ? CD ? A GLU 185 CD 66 1 Y 1 A GLU 181 ? OE1 ? A GLU 185 OE1 67 1 Y 1 A GLU 181 ? OE2 ? A GLU 185 OE2 68 1 Y 1 A ASN 196 ? CG ? A ASN 200 CG 69 1 Y 1 A ASN 196 ? OD1 ? A ASN 200 OD1 70 1 Y 1 A ASN 196 ? ND2 ? A ASN 200 ND2 71 1 Y 1 B DT 1 ? P ? B DT 7 P 72 1 Y 1 B DT 1 ? OP1 ? B DT 7 OP1 73 1 Y 1 B DT 1 ? OP2 ? B DT 7 OP2 74 1 Y 1 B DT 1 ? "O5'" ? B DT 7 "O5'" 75 1 Y 1 B DT 1 ? C2 ? B DT 7 C2 76 1 Y 1 B DT 1 ? O2 ? B DT 7 O2 77 1 Y 1 B DT 1 ? N3 ? B DT 7 N3 78 1 Y 1 B DT 1 ? C4 ? B DT 7 C4 79 1 Y 1 B DT 1 ? O4 ? B DT 7 O4 80 1 Y 1 B DT 1 ? C5 ? B DT 7 C5 81 1 Y 1 B DT 1 ? C7 ? B DT 7 C7 82 1 Y 1 B DT 1 ? C6 ? B DT 7 C6 83 1 Y 1 B DT 5 ? "C5'" ? B DT 11 "C5'" 84 1 Y 1 B DT 5 ? "C4'" ? B DT 11 "C4'" 85 1 Y 1 B DT 5 ? "O4'" ? B DT 11 "O4'" 86 1 Y 1 B DT 5 ? "C3'" ? B DT 11 "C3'" 87 1 Y 1 B DT 5 ? "O3'" ? B DT 11 "O3'" 88 1 Y 1 B DT 5 ? "C2'" ? B DT 11 "C2'" 89 1 Y 1 B DT 5 ? "C1'" ? B DT 11 "C1'" 90 1 Y 1 B DT 5 ? N1 ? B DT 11 N1 91 1 Y 1 B DT 5 ? C2 ? B DT 11 C2 92 1 Y 1 B DT 5 ? O2 ? B DT 11 O2 93 1 Y 1 B DT 5 ? N3 ? B DT 11 N3 94 1 Y 1 B DT 5 ? C4 ? B DT 11 C4 95 1 Y 1 B DT 5 ? O4 ? B DT 11 O4 96 1 Y 1 B DT 5 ? C5 ? B DT 11 C5 97 1 Y 1 B DT 5 ? C7 ? B DT 11 C7 98 1 Y 1 B DT 5 ? C6 ? B DT 11 C6 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5KEG _cell.details ? _cell.formula_units_Z ? _cell.length_a 56.583 _cell.length_a_esd ? _cell.length_b 72.666 _cell.length_b_esd ? _cell.length_c 114.971 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KEG _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5KEG _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.13 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 42.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;100 mM MOPS 50 mM MgCl2 50 mM CaCl2 23% PEG 3350 15% 2-methyl-2,4-pentanediol ; _exptl_crystal_grow.pdbx_pH_range 0.05 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU SATURN 944' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-02-04 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.54 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5KEG _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.20 _reflns.d_resolution_low 30.71 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12162 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.2 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 13.1 _reflns.pdbx_Rmerge_I_obs 0.091 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 27.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.24 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.0 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 82.9 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.528 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 8.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5KEG _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.20 _refine.ls_d_res_low 30.71 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12146 _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.9 _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.225 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.177 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4XXO _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1469 _refine_hist.pdbx_number_atoms_nucleic_acid 71 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 100 _refine_hist.number_atoms_total 1643 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 30.71 # _refine_ls_shell.R_factor_R_free 0.266 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.199 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.d_res_high 2.2 _refine_ls_shell.d_res_low 2.42 _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.number_reflns_all 2670 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.percent_reflns_obs 92.0 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? # _struct.entry_id 5KEG _struct.title 'Crystal structure of APOBEC3A in complex with a single-stranded DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5KEG _struct_keywords.text 'APOBEC3A, DNA cytidine deaminase complex with a substrate DNA, HYDROLASE-DNA complex' _struct_keywords.pdbx_keywords HYDROLASE/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP ABC3A_HUMAN P31941 ? 1 ;MEASPASGPRHLMDPHIFTSNFNNGIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAKNLLCGFYGRHAELRFLDLVP SLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFKH CWDTFVDHQGCPFQPWDGLDEHSQALSGRLRAILQNQGN ; 1 2 PDB 5KEG 5KEG ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5KEG A 5 ? 203 ? P31941 1 ? 199 ? 1 199 2 2 5KEG B 1 ? 15 ? 5KEG -5 ? 9 ? -5 9 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5KEG GLY A 1 ? UNP P31941 ? ? 'expression tag' -3 1 1 5KEG PRO A 2 ? UNP P31941 ? ? 'expression tag' -2 2 1 5KEG GLY A 3 ? UNP P31941 ? ? 'expression tag' -1 3 1 5KEG HIS A 4 ? UNP P31941 ? ? 'expression tag' 0 4 1 5KEG ALA A 76 ? UNP P31941 GLU 72 'engineered mutation' 72 5 1 5KEG ALA A 175 ? UNP P31941 CYS 171 'engineered mutation' 171 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 18 ? PHE A 26 ? ASP A 14 PHE A 22 1 ? 9 HELX_P HELX_P2 AA2 ASP A 53 ? ARG A 56 ? ASP A 49 ARG A 52 5 ? 4 HELX_P HELX_P3 AA3 HIS A 74 ? GLN A 87 ? HIS A 70 GLN A 83 1 ? 14 HELX_P HELX_P4 AA4 GLY A 109 ? ASN A 121 ? GLY A 105 ASN A 117 1 ? 13 HELX_P HELX_P5 AA5 LEU A 139 ? ALA A 150 ? LEU A 135 ALA A 146 1 ? 12 HELX_P HELX_P6 AA6 THR A 158 ? VAL A 170 ? THR A 154 VAL A 166 1 ? 13 HELX_P HELX_P7 AA7 GLY A 182 ? ASN A 200 ? GLY A 178 ASN A 196 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 68 SG ? ? ? 1_555 A CYS 68 SG ? ? A CYS 64 A CYS 64 3_557 ? ? ? ? ? ? ? 1.971 ? ? metalc1 metalc ? ? A HIS 74 ND1 ? ? ? 1_555 C ZN . ZN ? ? A HIS 70 A ZN 201 1_555 ? ? ? ? ? ? ? 2.075 ? ? metalc2 metalc ? ? A CYS 105 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 101 A ZN 201 1_555 ? ? ? ? ? ? ? 2.322 ? ? metalc3 metalc ? ? A CYS 110 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 106 A ZN 201 1_555 ? ? ? ? ? ? ? 2.150 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 ND1 ? A HIS 74 ? A HIS 70 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 105 ? A CYS 101 ? 1_555 113.9 ? 2 ND1 ? A HIS 74 ? A HIS 70 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 110 ? A CYS 106 ? 1_555 109.2 ? 3 SG ? A CYS 105 ? A CYS 101 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 110 ? A CYS 106 ? 1_555 109.7 ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 68 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 68 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 64 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 64 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 3_557 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 48 ? LYS A 51 ? THR A 44 LYS A 47 AA1 2 TYR A 36 ? ASP A 45 ? TYR A 32 ASP A 41 AA1 3 GLY A 57 ? HIS A 60 ? GLY A 53 HIS A 56 AA2 1 THR A 48 ? LYS A 51 ? THR A 44 LYS A 47 AA2 2 TYR A 36 ? ASP A 45 ? TYR A 32 ASP A 41 AA2 3 ILE A 93 ? ILE A 100 ? ILE A 89 ILE A 96 AA2 4 VAL A 124 ? ALA A 130 ? VAL A 120 ALA A 126 AA2 5 GLN A 153 ? ILE A 156 ? GLN A 149 ILE A 152 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O THR A 48 ? O THR A 44 N ASP A 45 ? N ASP A 41 AA1 2 3 N LEU A 37 ? N LEU A 33 O LEU A 59 ? O LEU A 55 AA2 1 2 O THR A 48 ? O THR A 44 N ASP A 45 ? N ASP A 41 AA2 2 3 N CYS A 38 ? N CYS A 34 O PHE A 99 ? O PHE A 95 AA2 3 4 N VAL A 96 ? N VAL A 92 O ARG A 125 ? O ARG A 121 AA2 4 5 N ILE A 128 ? N ILE A 124 O SER A 155 ? O SER A 151 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 201 ? 4 'binding site for residue ZN A 201' AC2 Software A CL 203 ? 6 'binding site for residue CL A 203' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 74 ? HIS A 70 . ? 1_555 ? 2 AC1 4 CYS A 105 ? CYS A 101 . ? 1_555 ? 3 AC1 4 CYS A 110 ? CYS A 106 . ? 1_555 ? 4 AC1 4 CL E . ? CL A 203 . ? 1_555 ? 5 AC2 6 HIS A 74 ? HIS A 70 . ? 1_555 ? 6 AC2 6 PRO A 104 ? PRO A 100 . ? 1_555 ? 7 AC2 6 CYS A 105 ? CYS A 101 . ? 1_555 ? 8 AC2 6 CYS A 110 ? CYS A 106 . ? 1_555 ? 9 AC2 6 ZN C . ? ZN A 201 . ? 1_555 ? 10 AC2 6 DC B 9 ? DC B 3 . ? 1_555 ? # _pdbx_entry_details.entry_id 5KEG _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 301 ? ? O A HOH 314 ? ? 1.84 2 1 O A HOH 378 ? ? O A HOH 382 ? ? 2.02 3 1 O A HOH 365 ? ? O A HOH 393 ? ? 2.18 4 1 O A HOH 380 ? ? O A HOH 394 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 29 ? ? -89.05 36.20 2 1 MET A 48 ? ? -110.30 74.00 3 1 ASN A 61 ? ? -159.30 78.36 4 1 ASN A 117 ? ? -105.81 73.03 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 305 ? F HOH . 2 1 A HOH 395 ? F HOH . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -3 ? A GLY 1 2 1 Y 1 A PRO -2 ? A PRO 2 3 1 Y 1 A GLY -1 ? A GLY 3 4 1 Y 1 A HIS 0 ? A HIS 4 5 1 Y 1 A MET 1 ? A MET 5 6 1 Y 1 A GLU 2 ? A GLU 6 7 1 Y 1 A ALA 3 ? A ALA 7 8 1 Y 1 A SER 4 ? A SER 8 9 1 Y 1 A PRO 5 ? A PRO 9 10 1 Y 1 A ALA 6 ? A ALA 10 11 1 Y 1 A SER 7 ? A SER 11 12 1 Y 1 A GLY 8 ? A GLY 12 13 1 Y 1 A PRO 9 ? A PRO 13 14 1 Y 1 A GLN 197 ? A GLN 201 15 1 Y 1 A GLY 198 ? A GLY 202 16 1 Y 1 A ASN 199 ? A ASN 203 17 1 Y 1 B DT -5 ? B DT 1 18 1 Y 1 B DT -4 ? B DT 2 19 1 Y 1 B DT -3 ? B DT 3 20 1 Y 1 B DT -2 ? B DT 4 21 1 Y 1 B DT -1 ? B DT 5 22 1 Y 1 B DT 0 ? B DT 6 23 1 Y 1 B DT 6 ? B DT 12 24 1 Y 1 B DT 7 ? B DT 13 25 1 Y 1 B DT 8 ? B DT 14 26 1 Y 1 B DT 9 ? B DT 15 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CL CL CL N N 75 CYS N N N N 76 CYS CA C N R 77 CYS C C N N 78 CYS O O N N 79 CYS CB C N N 80 CYS SG S N N 81 CYS OXT O N N 82 CYS H H N N 83 CYS H2 H N N 84 CYS HA H N N 85 CYS HB2 H N N 86 CYS HB3 H N N 87 CYS HG H N N 88 CYS HXT H N N 89 DC OP3 O N N 90 DC P P N N 91 DC OP1 O N N 92 DC OP2 O N N 93 DC "O5'" O N N 94 DC "C5'" C N N 95 DC "C4'" C N R 96 DC "O4'" O N N 97 DC "C3'" C N S 98 DC "O3'" O N N 99 DC "C2'" C N N 100 DC "C1'" C N R 101 DC N1 N N N 102 DC C2 C N N 103 DC O2 O N N 104 DC N3 N N N 105 DC C4 C N N 106 DC N4 N N N 107 DC C5 C N N 108 DC C6 C N N 109 DC HOP3 H N N 110 DC HOP2 H N N 111 DC "H5'" H N N 112 DC "H5''" H N N 113 DC "H4'" H N N 114 DC "H3'" H N N 115 DC "HO3'" H N N 116 DC "H2'" H N N 117 DC "H2''" H N N 118 DC "H1'" H N N 119 DC H41 H N N 120 DC H42 H N N 121 DC H5 H N N 122 DC H6 H N N 123 DT OP3 O N N 124 DT P P N N 125 DT OP1 O N N 126 DT OP2 O N N 127 DT "O5'" O N N 128 DT "C5'" C N N 129 DT "C4'" C N R 130 DT "O4'" O N N 131 DT "C3'" C N S 132 DT "O3'" O N N 133 DT "C2'" C N N 134 DT "C1'" C N R 135 DT N1 N N N 136 DT C2 C N N 137 DT O2 O N N 138 DT N3 N N N 139 DT C4 C N N 140 DT O4 O N N 141 DT C5 C N N 142 DT C7 C N N 143 DT C6 C N N 144 DT HOP3 H N N 145 DT HOP2 H N N 146 DT "H5'" H N N 147 DT "H5''" H N N 148 DT "H4'" H N N 149 DT "H3'" H N N 150 DT "HO3'" H N N 151 DT "H2'" H N N 152 DT "H2''" H N N 153 DT "H1'" H N N 154 DT H3 H N N 155 DT H71 H N N 156 DT H72 H N N 157 DT H73 H N N 158 DT H6 H N N 159 GLN N N N N 160 GLN CA C N S 161 GLN C C N N 162 GLN O O N N 163 GLN CB C N N 164 GLN CG C N N 165 GLN CD C N N 166 GLN OE1 O N N 167 GLN NE2 N N N 168 GLN OXT O N N 169 GLN H H N N 170 GLN H2 H N N 171 GLN HA H N N 172 GLN HB2 H N N 173 GLN HB3 H N N 174 GLN HG2 H N N 175 GLN HG3 H N N 176 GLN HE21 H N N 177 GLN HE22 H N N 178 GLN HXT H N N 179 GLU N N N N 180 GLU CA C N S 181 GLU C C N N 182 GLU O O N N 183 GLU CB C N N 184 GLU CG C N N 185 GLU CD C N N 186 GLU OE1 O N N 187 GLU OE2 O N N 188 GLU OXT O N N 189 GLU H H N N 190 GLU H2 H N N 191 GLU HA H N N 192 GLU HB2 H N N 193 GLU HB3 H N N 194 GLU HG2 H N N 195 GLU HG3 H N N 196 GLU HE2 H N N 197 GLU HXT H N N 198 GLY N N N N 199 GLY CA C N N 200 GLY C C N N 201 GLY O O N N 202 GLY OXT O N N 203 GLY H H N N 204 GLY H2 H N N 205 GLY HA2 H N N 206 GLY HA3 H N N 207 GLY HXT H N N 208 HIS N N N N 209 HIS CA C N S 210 HIS C C N N 211 HIS O O N N 212 HIS CB C N N 213 HIS CG C Y N 214 HIS ND1 N Y N 215 HIS CD2 C Y N 216 HIS CE1 C Y N 217 HIS NE2 N Y N 218 HIS OXT O N N 219 HIS H H N N 220 HIS H2 H N N 221 HIS HA H N N 222 HIS HB2 H N N 223 HIS HB3 H N N 224 HIS HD1 H N N 225 HIS HD2 H N N 226 HIS HE1 H N N 227 HIS HE2 H N N 228 HIS HXT H N N 229 HOH O O N N 230 HOH H1 H N N 231 HOH H2 H N N 232 ILE N N N N 233 ILE CA C N S 234 ILE C C N N 235 ILE O O N N 236 ILE CB C N S 237 ILE CG1 C N N 238 ILE CG2 C N N 239 ILE CD1 C N N 240 ILE OXT O N N 241 ILE H H N N 242 ILE H2 H N N 243 ILE HA H N N 244 ILE HB H N N 245 ILE HG12 H N N 246 ILE HG13 H N N 247 ILE HG21 H N N 248 ILE HG22 H N N 249 ILE HG23 H N N 250 ILE HD11 H N N 251 ILE HD12 H N N 252 ILE HD13 H N N 253 ILE HXT H N N 254 LEU N N N N 255 LEU CA C N S 256 LEU C C N N 257 LEU O O N N 258 LEU CB C N N 259 LEU CG C N N 260 LEU CD1 C N N 261 LEU CD2 C N N 262 LEU OXT O N N 263 LEU H H N N 264 LEU H2 H N N 265 LEU HA H N N 266 LEU HB2 H N N 267 LEU HB3 H N N 268 LEU HG H N N 269 LEU HD11 H N N 270 LEU HD12 H N N 271 LEU HD13 H N N 272 LEU HD21 H N N 273 LEU HD22 H N N 274 LEU HD23 H N N 275 LEU HXT H N N 276 LYS N N N N 277 LYS CA C N S 278 LYS C C N N 279 LYS O O N N 280 LYS CB C N N 281 LYS CG C N N 282 LYS CD C N N 283 LYS CE C N N 284 LYS NZ N N N 285 LYS OXT O N N 286 LYS H H N N 287 LYS H2 H N N 288 LYS HA H N N 289 LYS HB2 H N N 290 LYS HB3 H N N 291 LYS HG2 H N N 292 LYS HG3 H N N 293 LYS HD2 H N N 294 LYS HD3 H N N 295 LYS HE2 H N N 296 LYS HE3 H N N 297 LYS HZ1 H N N 298 LYS HZ2 H N N 299 LYS HZ3 H N N 300 LYS HXT H N N 301 MET N N N N 302 MET CA C N S 303 MET C C N N 304 MET O O N N 305 MET CB C N N 306 MET CG C N N 307 MET SD S N N 308 MET CE C N N 309 MET OXT O N N 310 MET H H N N 311 MET H2 H N N 312 MET HA H N N 313 MET HB2 H N N 314 MET HB3 H N N 315 MET HG2 H N N 316 MET HG3 H N N 317 MET HE1 H N N 318 MET HE2 H N N 319 MET HE3 H N N 320 MET HXT H N N 321 PHE N N N N 322 PHE CA C N S 323 PHE C C N N 324 PHE O O N N 325 PHE CB C N N 326 PHE CG C Y N 327 PHE CD1 C Y N 328 PHE CD2 C Y N 329 PHE CE1 C Y N 330 PHE CE2 C Y N 331 PHE CZ C Y N 332 PHE OXT O N N 333 PHE H H N N 334 PHE H2 H N N 335 PHE HA H N N 336 PHE HB2 H N N 337 PHE HB3 H N N 338 PHE HD1 H N N 339 PHE HD2 H N N 340 PHE HE1 H N N 341 PHE HE2 H N N 342 PHE HZ H N N 343 PHE HXT H N N 344 PRO N N N N 345 PRO CA C N S 346 PRO C C N N 347 PRO O O N N 348 PRO CB C N N 349 PRO CG C N N 350 PRO CD C N N 351 PRO OXT O N N 352 PRO H H N N 353 PRO HA H N N 354 PRO HB2 H N N 355 PRO HB3 H N N 356 PRO HG2 H N N 357 PRO HG3 H N N 358 PRO HD2 H N N 359 PRO HD3 H N N 360 PRO HXT H N N 361 SER N N N N 362 SER CA C N S 363 SER C C N N 364 SER O O N N 365 SER CB C N N 366 SER OG O N N 367 SER OXT O N N 368 SER H H N N 369 SER H2 H N N 370 SER HA H N N 371 SER HB2 H N N 372 SER HB3 H N N 373 SER HG H N N 374 SER HXT H N N 375 THR N N N N 376 THR CA C N S 377 THR C C N N 378 THR O O N N 379 THR CB C N R 380 THR OG1 O N N 381 THR CG2 C N N 382 THR OXT O N N 383 THR H H N N 384 THR H2 H N N 385 THR HA H N N 386 THR HB H N N 387 THR HG1 H N N 388 THR HG21 H N N 389 THR HG22 H N N 390 THR HG23 H N N 391 THR HXT H N N 392 TRP N N N N 393 TRP CA C N S 394 TRP C C N N 395 TRP O O N N 396 TRP CB C N N 397 TRP CG C Y N 398 TRP CD1 C Y N 399 TRP CD2 C Y N 400 TRP NE1 N Y N 401 TRP CE2 C Y N 402 TRP CE3 C Y N 403 TRP CZ2 C Y N 404 TRP CZ3 C Y N 405 TRP CH2 C Y N 406 TRP OXT O N N 407 TRP H H N N 408 TRP H2 H N N 409 TRP HA H N N 410 TRP HB2 H N N 411 TRP HB3 H N N 412 TRP HD1 H N N 413 TRP HE1 H N N 414 TRP HE3 H N N 415 TRP HZ2 H N N 416 TRP HZ3 H N N 417 TRP HH2 H N N 418 TRP HXT H N N 419 TYR N N N N 420 TYR CA C N S 421 TYR C C N N 422 TYR O O N N 423 TYR CB C N N 424 TYR CG C Y N 425 TYR CD1 C Y N 426 TYR CD2 C Y N 427 TYR CE1 C Y N 428 TYR CE2 C Y N 429 TYR CZ C Y N 430 TYR OH O N N 431 TYR OXT O N N 432 TYR H H N N 433 TYR H2 H N N 434 TYR HA H N N 435 TYR HB2 H N N 436 TYR HB3 H N N 437 TYR HD1 H N N 438 TYR HD2 H N N 439 TYR HE1 H N N 440 TYR HE2 H N N 441 TYR HH H N N 442 TYR HXT H N N 443 VAL N N N N 444 VAL CA C N S 445 VAL C C N N 446 VAL O O N N 447 VAL CB C N N 448 VAL CG1 C N N 449 VAL CG2 C N N 450 VAL OXT O N N 451 VAL H H N N 452 VAL H2 H N N 453 VAL HA H N N 454 VAL HB H N N 455 VAL HG11 H N N 456 VAL HG12 H N N 457 VAL HG13 H N N 458 VAL HG21 H N N 459 VAL HG22 H N N 460 VAL HG23 H N N 461 VAL HXT H N N 462 ZN ZN ZN N N 463 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DC OP3 P sing N N 83 DC OP3 HOP3 sing N N 84 DC P OP1 doub N N 85 DC P OP2 sing N N 86 DC P "O5'" sing N N 87 DC OP2 HOP2 sing N N 88 DC "O5'" "C5'" sing N N 89 DC "C5'" "C4'" sing N N 90 DC "C5'" "H5'" sing N N 91 DC "C5'" "H5''" sing N N 92 DC "C4'" "O4'" sing N N 93 DC "C4'" "C3'" sing N N 94 DC "C4'" "H4'" sing N N 95 DC "O4'" "C1'" sing N N 96 DC "C3'" "O3'" sing N N 97 DC "C3'" "C2'" sing N N 98 DC "C3'" "H3'" sing N N 99 DC "O3'" "HO3'" sing N N 100 DC "C2'" "C1'" sing N N 101 DC "C2'" "H2'" sing N N 102 DC "C2'" "H2''" sing N N 103 DC "C1'" N1 sing N N 104 DC "C1'" "H1'" sing N N 105 DC N1 C2 sing N N 106 DC N1 C6 sing N N 107 DC C2 O2 doub N N 108 DC C2 N3 sing N N 109 DC N3 C4 doub N N 110 DC C4 N4 sing N N 111 DC C4 C5 sing N N 112 DC N4 H41 sing N N 113 DC N4 H42 sing N N 114 DC C5 C6 doub N N 115 DC C5 H5 sing N N 116 DC C6 H6 sing N N 117 DT OP3 P sing N N 118 DT OP3 HOP3 sing N N 119 DT P OP1 doub N N 120 DT P OP2 sing N N 121 DT P "O5'" sing N N 122 DT OP2 HOP2 sing N N 123 DT "O5'" "C5'" sing N N 124 DT "C5'" "C4'" sing N N 125 DT "C5'" "H5'" sing N N 126 DT "C5'" "H5''" sing N N 127 DT "C4'" "O4'" sing N N 128 DT "C4'" "C3'" sing N N 129 DT "C4'" "H4'" sing N N 130 DT "O4'" "C1'" sing N N 131 DT "C3'" "O3'" sing N N 132 DT "C3'" "C2'" sing N N 133 DT "C3'" "H3'" sing N N 134 DT "O3'" "HO3'" sing N N 135 DT "C2'" "C1'" sing N N 136 DT "C2'" "H2'" sing N N 137 DT "C2'" "H2''" sing N N 138 DT "C1'" N1 sing N N 139 DT "C1'" "H1'" sing N N 140 DT N1 C2 sing N N 141 DT N1 C6 sing N N 142 DT C2 O2 doub N N 143 DT C2 N3 sing N N 144 DT N3 C4 sing N N 145 DT N3 H3 sing N N 146 DT C4 O4 doub N N 147 DT C4 C5 sing N N 148 DT C5 C7 sing N N 149 DT C5 C6 doub N N 150 DT C7 H71 sing N N 151 DT C7 H72 sing N N 152 DT C7 H73 sing N N 153 DT C6 H6 sing N N 154 GLN N CA sing N N 155 GLN N H sing N N 156 GLN N H2 sing N N 157 GLN CA C sing N N 158 GLN CA CB sing N N 159 GLN CA HA sing N N 160 GLN C O doub N N 161 GLN C OXT sing N N 162 GLN CB CG sing N N 163 GLN CB HB2 sing N N 164 GLN CB HB3 sing N N 165 GLN CG CD sing N N 166 GLN CG HG2 sing N N 167 GLN CG HG3 sing N N 168 GLN CD OE1 doub N N 169 GLN CD NE2 sing N N 170 GLN NE2 HE21 sing N N 171 GLN NE2 HE22 sing N N 172 GLN OXT HXT sing N N 173 GLU N CA sing N N 174 GLU N H sing N N 175 GLU N H2 sing N N 176 GLU CA C sing N N 177 GLU CA CB sing N N 178 GLU CA HA sing N N 179 GLU C O doub N N 180 GLU C OXT sing N N 181 GLU CB CG sing N N 182 GLU CB HB2 sing N N 183 GLU CB HB3 sing N N 184 GLU CG CD sing N N 185 GLU CG HG2 sing N N 186 GLU CG HG3 sing N N 187 GLU CD OE1 doub N N 188 GLU CD OE2 sing N N 189 GLU OE2 HE2 sing N N 190 GLU OXT HXT sing N N 191 GLY N CA sing N N 192 GLY N H sing N N 193 GLY N H2 sing N N 194 GLY CA C sing N N 195 GLY CA HA2 sing N N 196 GLY CA HA3 sing N N 197 GLY C O doub N N 198 GLY C OXT sing N N 199 GLY OXT HXT sing N N 200 HIS N CA sing N N 201 HIS N H sing N N 202 HIS N H2 sing N N 203 HIS CA C sing N N 204 HIS CA CB sing N N 205 HIS CA HA sing N N 206 HIS C O doub N N 207 HIS C OXT sing N N 208 HIS CB CG sing N N 209 HIS CB HB2 sing N N 210 HIS CB HB3 sing N N 211 HIS CG ND1 sing Y N 212 HIS CG CD2 doub Y N 213 HIS ND1 CE1 doub Y N 214 HIS ND1 HD1 sing N N 215 HIS CD2 NE2 sing Y N 216 HIS CD2 HD2 sing N N 217 HIS CE1 NE2 sing Y N 218 HIS CE1 HE1 sing N N 219 HIS NE2 HE2 sing N N 220 HIS OXT HXT sing N N 221 HOH O H1 sing N N 222 HOH O H2 sing N N 223 ILE N CA sing N N 224 ILE N H sing N N 225 ILE N H2 sing N N 226 ILE CA C sing N N 227 ILE CA CB sing N N 228 ILE CA HA sing N N 229 ILE C O doub N N 230 ILE C OXT sing N N 231 ILE CB CG1 sing N N 232 ILE CB CG2 sing N N 233 ILE CB HB sing N N 234 ILE CG1 CD1 sing N N 235 ILE CG1 HG12 sing N N 236 ILE CG1 HG13 sing N N 237 ILE CG2 HG21 sing N N 238 ILE CG2 HG22 sing N N 239 ILE CG2 HG23 sing N N 240 ILE CD1 HD11 sing N N 241 ILE CD1 HD12 sing N N 242 ILE CD1 HD13 sing N N 243 ILE OXT HXT sing N N 244 LEU N CA sing N N 245 LEU N H sing N N 246 LEU N H2 sing N N 247 LEU CA C sing N N 248 LEU CA CB sing N N 249 LEU CA HA sing N N 250 LEU C O doub N N 251 LEU C OXT sing N N 252 LEU CB CG sing N N 253 LEU CB HB2 sing N N 254 LEU CB HB3 sing N N 255 LEU CG CD1 sing N N 256 LEU CG CD2 sing N N 257 LEU CG HG sing N N 258 LEU CD1 HD11 sing N N 259 LEU CD1 HD12 sing N N 260 LEU CD1 HD13 sing N N 261 LEU CD2 HD21 sing N N 262 LEU CD2 HD22 sing N N 263 LEU CD2 HD23 sing N N 264 LEU OXT HXT sing N N 265 LYS N CA sing N N 266 LYS N H sing N N 267 LYS N H2 sing N N 268 LYS CA C sing N N 269 LYS CA CB sing N N 270 LYS CA HA sing N N 271 LYS C O doub N N 272 LYS C OXT sing N N 273 LYS CB CG sing N N 274 LYS CB HB2 sing N N 275 LYS CB HB3 sing N N 276 LYS CG CD sing N N 277 LYS CG HG2 sing N N 278 LYS CG HG3 sing N N 279 LYS CD CE sing N N 280 LYS CD HD2 sing N N 281 LYS CD HD3 sing N N 282 LYS CE NZ sing N N 283 LYS CE HE2 sing N N 284 LYS CE HE3 sing N N 285 LYS NZ HZ1 sing N N 286 LYS NZ HZ2 sing N N 287 LYS NZ HZ3 sing N N 288 LYS OXT HXT sing N N 289 MET N CA sing N N 290 MET N H sing N N 291 MET N H2 sing N N 292 MET CA C sing N N 293 MET CA CB sing N N 294 MET CA HA sing N N 295 MET C O doub N N 296 MET C OXT sing N N 297 MET CB CG sing N N 298 MET CB HB2 sing N N 299 MET CB HB3 sing N N 300 MET CG SD sing N N 301 MET CG HG2 sing N N 302 MET CG HG3 sing N N 303 MET SD CE sing N N 304 MET CE HE1 sing N N 305 MET CE HE2 sing N N 306 MET CE HE3 sing N N 307 MET OXT HXT sing N N 308 PHE N CA sing N N 309 PHE N H sing N N 310 PHE N H2 sing N N 311 PHE CA C sing N N 312 PHE CA CB sing N N 313 PHE CA HA sing N N 314 PHE C O doub N N 315 PHE C OXT sing N N 316 PHE CB CG sing N N 317 PHE CB HB2 sing N N 318 PHE CB HB3 sing N N 319 PHE CG CD1 doub Y N 320 PHE CG CD2 sing Y N 321 PHE CD1 CE1 sing Y N 322 PHE CD1 HD1 sing N N 323 PHE CD2 CE2 doub Y N 324 PHE CD2 HD2 sing N N 325 PHE CE1 CZ doub Y N 326 PHE CE1 HE1 sing N N 327 PHE CE2 CZ sing Y N 328 PHE CE2 HE2 sing N N 329 PHE CZ HZ sing N N 330 PHE OXT HXT sing N N 331 PRO N CA sing N N 332 PRO N CD sing N N 333 PRO N H sing N N 334 PRO CA C sing N N 335 PRO CA CB sing N N 336 PRO CA HA sing N N 337 PRO C O doub N N 338 PRO C OXT sing N N 339 PRO CB CG sing N N 340 PRO CB HB2 sing N N 341 PRO CB HB3 sing N N 342 PRO CG CD sing N N 343 PRO CG HG2 sing N N 344 PRO CG HG3 sing N N 345 PRO CD HD2 sing N N 346 PRO CD HD3 sing N N 347 PRO OXT HXT sing N N 348 SER N CA sing N N 349 SER N H sing N N 350 SER N H2 sing N N 351 SER CA C sing N N 352 SER CA CB sing N N 353 SER CA HA sing N N 354 SER C O doub N N 355 SER C OXT sing N N 356 SER CB OG sing N N 357 SER CB HB2 sing N N 358 SER CB HB3 sing N N 359 SER OG HG sing N N 360 SER OXT HXT sing N N 361 THR N CA sing N N 362 THR N H sing N N 363 THR N H2 sing N N 364 THR CA C sing N N 365 THR CA CB sing N N 366 THR CA HA sing N N 367 THR C O doub N N 368 THR C OXT sing N N 369 THR CB OG1 sing N N 370 THR CB CG2 sing N N 371 THR CB HB sing N N 372 THR OG1 HG1 sing N N 373 THR CG2 HG21 sing N N 374 THR CG2 HG22 sing N N 375 THR CG2 HG23 sing N N 376 THR OXT HXT sing N N 377 TRP N CA sing N N 378 TRP N H sing N N 379 TRP N H2 sing N N 380 TRP CA C sing N N 381 TRP CA CB sing N N 382 TRP CA HA sing N N 383 TRP C O doub N N 384 TRP C OXT sing N N 385 TRP CB CG sing N N 386 TRP CB HB2 sing N N 387 TRP CB HB3 sing N N 388 TRP CG CD1 doub Y N 389 TRP CG CD2 sing Y N 390 TRP CD1 NE1 sing Y N 391 TRP CD1 HD1 sing N N 392 TRP CD2 CE2 doub Y N 393 TRP CD2 CE3 sing Y N 394 TRP NE1 CE2 sing Y N 395 TRP NE1 HE1 sing N N 396 TRP CE2 CZ2 sing Y N 397 TRP CE3 CZ3 doub Y N 398 TRP CE3 HE3 sing N N 399 TRP CZ2 CH2 doub Y N 400 TRP CZ2 HZ2 sing N N 401 TRP CZ3 CH2 sing Y N 402 TRP CZ3 HZ3 sing N N 403 TRP CH2 HH2 sing N N 404 TRP OXT HXT sing N N 405 TYR N CA sing N N 406 TYR N H sing N N 407 TYR N H2 sing N N 408 TYR CA C sing N N 409 TYR CA CB sing N N 410 TYR CA HA sing N N 411 TYR C O doub N N 412 TYR C OXT sing N N 413 TYR CB CG sing N N 414 TYR CB HB2 sing N N 415 TYR CB HB3 sing N N 416 TYR CG CD1 doub Y N 417 TYR CG CD2 sing Y N 418 TYR CD1 CE1 sing Y N 419 TYR CD1 HD1 sing N N 420 TYR CD2 CE2 doub Y N 421 TYR CD2 HD2 sing N N 422 TYR CE1 CZ doub Y N 423 TYR CE1 HE1 sing N N 424 TYR CE2 CZ sing Y N 425 TYR CE2 HE2 sing N N 426 TYR CZ OH sing N N 427 TYR OH HH sing N N 428 TYR OXT HXT sing N N 429 VAL N CA sing N N 430 VAL N H sing N N 431 VAL N H2 sing N N 432 VAL CA C sing N N 433 VAL CA CB sing N N 434 VAL CA HA sing N N 435 VAL C O doub N N 436 VAL C OXT sing N N 437 VAL CB CG1 sing N N 438 VAL CB CG2 sing N N 439 VAL CB HB sing N N 440 VAL CG1 HG11 sing N N 441 VAL CG1 HG12 sing N N 442 VAL CG1 HG13 sing N N 443 VAL CG2 HG21 sing N N 444 VAL CG2 HG22 sing N N 445 VAL CG2 HG23 sing N N 446 VAL OXT HXT sing N N 447 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM091743 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4XXO _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5KEG _atom_sites.fract_transf_matrix[1][1] 0.017673 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013762 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008698 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA CL N O P S ZN # loop_