HEADER TRANSFERASE 11-JUN-16 5KF2 TITLE X-RAY STRUCTURE OF A GLUCOSAMINE N-ACETYLTRANSFERASE FROM CLOSTRIDIUM TITLE 2 ACETOBUTYLICUM, APO FORM, PH 8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PREDICTED ACETYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM ACETOBUTYLICUM (STRAIN ATCC 824 / SOURCE 3 DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787); SOURCE 4 ORGANISM_TAXID: 272562; SOURCE 5 STRAIN: ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787; SOURCE 6 GENE: CA_C0184; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3) KEYWDS N-ACETYLTRANSFERASE, GNAT, TANDEM-GNAT, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.M.HOLDEN,J.B.THODEN,B.J.DOPKINS,P.A.TIPTON REVDAT 7 27-SEP-23 5KF2 1 REMARK REVDAT 6 25-DEC-19 5KF2 1 REMARK REVDAT 5 15-NOV-17 5KF2 1 SOURCE REVDAT 4 27-SEP-17 5KF2 1 JRNL REMARK REVDAT 3 24-AUG-16 5KF2 1 JRNL REVDAT 2 13-JUL-16 5KF2 1 JRNL REVDAT 1 06-JUL-16 5KF2 0 JRNL AUTH B.J.DOPKINS,P.A.TIPTON,J.B.THODEN,H.M.HOLDEN JRNL TITL STRUCTURAL STUDIES ON A GLUCOSAMINE/GLUCOSAMINIDE JRNL TITL 2 N-ACETYLTRANSFERASE. JRNL REF BIOCHEMISTRY V. 55 4495 2016 JRNL REFN ISSN 0006-2960 JRNL PMID 27348258 JRNL DOI 10.1021/ACS.BIOCHEM.6B00536 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0124 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 24463 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1299 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1777 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.79 REMARK 3 BIN R VALUE (WORKING SET) : 0.2680 REMARK 3 BIN FREE R VALUE SET COUNT : 92 REMARK 3 BIN FREE R VALUE : 0.3190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2620 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 87 REMARK 3 SOLVENT ATOMS : 173 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.16000 REMARK 3 B22 (A**2) : 2.43000 REMARK 3 B33 (A**2) : -0.91000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.60000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.157 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.154 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.121 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.280 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2796 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2683 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3771 ; 2.001 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6191 ; 0.964 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 324 ; 7.417 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 127 ;39.228 ;23.780 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 509 ;15.602 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;20.687 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 386 ; 0.270 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3046 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 668 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1276 ; 2.613 ; 2.180 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1274 ; 2.608 ; 2.178 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1594 ; 3.661 ; 3.259 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1595 ; 3.660 ; 3.262 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1520 ; 3.658 ; 2.613 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1516 ; 3.648 ; 2.605 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2168 ; 5.597 ; 3.718 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3328 ; 7.446 ;18.462 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3329 ; 7.445 ;18.466 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5KF2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1000222143. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER PLATINUM 135 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SAINT REMARK 200 DATA SCALING SOFTWARE : SADABS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25764 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : 0.07500 REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.32500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5KF1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 7-10% PEG-5000, 100 MM HEPPS, PH 8, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 59.89500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.54600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 59.89500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 21.54600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 318 REMARK 465 LYS A 319 REMARK 465 GLY A 320 REMARK 465 GLY A 321 REMARK 465 GLY A 322 REMARK 465 HIS A 323 REMARK 465 HIS A 324 REMARK 465 HIS A 325 REMARK 465 HIS A 326 REMARK 465 HIS A 327 REMARK 465 HIS A 328 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 316 CG CD CE NZ REMARK 470 ASP A 317 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2 PO4 A 405 O HOH A 501 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 144 -138.36 -121.08 REMARK 500 ASP A 145 -163.47 -102.56 REMARK 500 LYS A 216 -112.67 73.51 REMARK 500 LYS A 282 -94.43 -112.64 REMARK 500 ASN A 301 17.29 81.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 COA A 401 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue COA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5KF1 RELATED DB: PDB REMARK 900 RELATED ID: 5KF8 RELATED DB: PDB REMARK 900 RELATED ID: 5KF9 RELATED DB: PDB REMARK 900 RELATED ID: 5KGA RELATED DB: PDB REMARK 900 RELATED ID: 5KGH RELATED DB: PDB REMARK 900 RELATED ID: 5KGJ RELATED DB: PDB REMARK 900 RELATED ID: 5KGP RELATED DB: PDB DBREF 5KF2 A 1 320 UNP Q97ML2 Q97ML2_CLOAB 1 320 SEQADV 5KF2 GLY A 321 UNP Q97ML2 EXPRESSION TAG SEQADV 5KF2 GLY A 322 UNP Q97ML2 EXPRESSION TAG SEQADV 5KF2 HIS A 323 UNP Q97ML2 EXPRESSION TAG SEQADV 5KF2 HIS A 324 UNP Q97ML2 EXPRESSION TAG SEQADV 5KF2 HIS A 325 UNP Q97ML2 EXPRESSION TAG SEQADV 5KF2 HIS A 326 UNP Q97ML2 EXPRESSION TAG SEQADV 5KF2 HIS A 327 UNP Q97ML2 EXPRESSION TAG SEQADV 5KF2 HIS A 328 UNP Q97ML2 EXPRESSION TAG SEQRES 1 A 328 MET GLU ILE LYS GLU THR TYR ASP PHE SER SER ILE VAL SEQRES 2 A 328 ASP LEU TRP ASN LYS ASN ILE GLY THR VAL TYR PRO MET SEQRES 3 A 328 ASN LEU GLU LEU PHE LYS GLN ASN TYR ILE ASN ASP ARG SEQRES 4 A 328 GLN ARG LYS LYS ILE MET GLY ALA PHE ASN GLY GLU ILE SEQRES 5 A 328 LEU ILE GLY PHE VAL ILE TYR LYS GLN TRP THR TYR LYS SEQRES 6 A 328 SER GLY SER LEU LYS PRO ASN HIS LYS ILE GLY TYR ILE SEQRES 7 A 328 ASN SER ILE ILE VAL ASP ILE ASN PHE ARG HIS GLN GLY SEQRES 8 A 328 ILE GLY THR LYS LEU LEU ASP ALA ALA GLU GLU GLU LEU SEQRES 9 A 328 ILE ASN SER GLY VAL LYS ILE LEU ARG CYS GLY SER ASP SEQRES 10 A 328 THR TYR HIS PHE PHE PRO GLY ILE PRO LEU GLU CYS LEU SEQRES 11 A 328 PRO SER GLU GLU PHE PHE LEU VAL ARG GLY TYR LYS MET SEQRES 12 A 328 GLN ASP TYR PHE TYR ASP LEU ILE GLY ASP VAL SER LYS SEQRES 13 A 328 VAL ASP PHE LYS LYS PRO SER ILE LYS ASP GLY PHE LYS SEQRES 14 A 328 VAL ASN VAL MET LYS PRO GLU ASP ARG LYS GLY LEU PHE SEQRES 15 A 328 GLU PHE LEU GLU LYS SER PHE SER GLY ARG TRP LEU GLU SEQRES 16 A 328 GLU PHE ILE GLU PHE PHE GLN VAL GLY MET LYS GLU ARG SEQRES 17 A 328 ASP ILE VAL LEU ILE LYS TYR LYS THR SER VAL ILE GLY SEQRES 18 A 328 PHE SER HIS ILE TYR ASP ASN LYS SER SER PHE ILE GLY SEQRES 19 A 328 PRO PRO ILE TYR TRP LYS ALA LEU LEU GLY HIS ASN TYR SEQRES 20 A 328 GLY GLY LEU GLY PRO ILE GLY ILE ASP LYS THR TYR ARG SEQRES 21 A 328 LYS GLN GLY LEU GLY ARG LEU LEU LEU TYR GLU SER LEU SEQRES 22 A 328 GLN ILE LEU LYS LYS ARG GLU VAL LYS LYS MET VAL ILE SEQRES 23 A 328 ASP TRP THR GLU LYS ASP ILE ILE ASN PHE TYR GLY ARG SEQRES 24 A 328 PHE ASN PHE MET PRO TRP LYS ALA TYR ARG LYS ALA THR SEQRES 25 A 328 LYS GLU VAL LYS ASP GLY LYS GLY GLY GLY HIS HIS HIS SEQRES 26 A 328 HIS HIS HIS HET COA A 401 23 HET ACO A 402 51 HET EDO A 403 4 HET EDO A 404 4 HET PO4 A 405 5 HETNAM COA COENZYME A HETNAM ACO ACETYL COENZYME *A HETNAM EDO 1,2-ETHANEDIOL HETNAM PO4 PHOSPHATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 COA C21 H36 N7 O16 P3 S FORMUL 3 ACO C23 H38 N7 O17 P3 S FORMUL 4 EDO 2(C2 H6 O2) FORMUL 6 PO4 O4 P 3- FORMUL 7 HOH *173(H2 O) HELIX 1 AA1 ASP A 8 GLY A 21 1 14 HELIX 2 AA2 ASN A 27 ASP A 38 1 12 HELIX 3 AA3 ILE A 85 ARG A 88 5 4 HELIX 4 AA4 GLY A 91 SER A 107 1 17 HELIX 5 AA5 GLU A 128 LEU A 130 5 3 HELIX 6 AA6 PRO A 131 ARG A 139 1 9 HELIX 7 AA7 SER A 155 VAL A 157 5 3 HELIX 8 AA8 LYS A 174 GLU A 176 5 3 HELIX 9 AA9 ASP A 177 PHE A 189 1 13 HELIX 10 AB1 GLY A 191 VAL A 203 1 13 HELIX 11 AB2 LYS A 206 ARG A 208 5 3 HELIX 12 AB3 GLY A 234 TYR A 238 5 5 HELIX 13 AB4 TRP A 239 LEU A 243 5 5 HELIX 14 AB5 LYS A 257 ARG A 260 5 4 HELIX 15 AB6 GLY A 263 ARG A 279 1 17 HELIX 16 AB7 ILE A 293 ARG A 299 1 7 SHEET 1 AA1 7 GLU A 2 GLU A 5 0 SHEET 2 AA1 7 ARG A 41 ASN A 49 -1 O GLY A 46 N LYS A 4 SHEET 3 AA1 7 ILE A 52 GLN A 61 -1 O ILE A 54 N ALA A 47 SHEET 4 AA1 7 ILE A 75 VAL A 83 -1 O TYR A 77 N LYS A 60 SHEET 5 AA1 7 ILE A 111 CYS A 114 1 O ILE A 111 N GLY A 76 SHEET 6 AA1 7 MET A 303 GLU A 314 -1 O LYS A 313 N LEU A 112 SHEET 7 AA1 7 ILE A 125 PRO A 126 -1 N ILE A 125 O ARG A 309 SHEET 1 AA212 GLU A 2 GLU A 5 0 SHEET 2 AA212 ARG A 41 ASN A 49 -1 O GLY A 46 N LYS A 4 SHEET 3 AA212 ILE A 52 GLN A 61 -1 O ILE A 54 N ALA A 47 SHEET 4 AA212 ILE A 75 VAL A 83 -1 O TYR A 77 N LYS A 60 SHEET 5 AA212 ILE A 111 CYS A 114 1 O ILE A 111 N GLY A 76 SHEET 6 AA212 MET A 303 GLU A 314 -1 O LYS A 313 N LEU A 112 SHEET 7 AA212 LYS A 142 ASP A 153 -1 N ASP A 149 O TRP A 305 SHEET 8 AA212 LYS A 283 GLU A 290 -1 O ILE A 286 N LEU A 150 SHEET 9 AA212 GLY A 248 ILE A 255 1 N LEU A 250 O VAL A 285 SHEET 10 AA212 SER A 218 TYR A 226 -1 N HIS A 224 O GLY A 251 SHEET 11 AA212 ILE A 210 TYR A 215 -1 N ILE A 213 O ILE A 220 SHEET 12 AA212 PHE A 168 VAL A 172 -1 N LYS A 169 O LYS A 214 CISPEP 1 GLY A 251 PRO A 252 0 -3.05 SITE 1 AC1 11 ILE A 253 GLY A 254 ILE A 255 ARG A 260 SITE 2 AC1 11 LYS A 261 GLN A 262 GLY A 263 LEU A 264 SITE 3 AC1 11 GLY A 265 ARG A 266 HOH A 541 SITE 1 AC2 28 ILE A 78 SER A 80 ILE A 81 ILE A 82 SITE 2 AC2 28 VAL A 83 ARG A 88 HIS A 89 GLN A 90 SITE 3 AC2 28 GLY A 91 ILE A 92 GLY A 93 THR A 94 SITE 4 AC2 28 CYS A 129 PRO A 131 SER A 132 GLU A 134 SITE 5 AC2 28 PHE A 135 LYS A 169 ASN A 295 HOH A 506 SITE 6 AC2 28 HOH A 516 HOH A 526 HOH A 532 HOH A 551 SITE 7 AC2 28 HOH A 601 HOH A 624 HOH A 629 HOH A 637 SITE 1 AC3 6 ASN A 19 ILE A 85 ARG A 88 GLY A 298 SITE 2 AC3 6 ASN A 301 HOH A 584 SITE 1 AC4 6 ARG A 41 TYR A 59 GLU A 103 LEU A 104 SITE 2 AC4 6 HOH A 579 HOH A 616 SITE 1 AC5 6 PHE A 189 SER A 190 GLY A 191 ARG A 192 SITE 2 AC5 6 TRP A 193 HOH A 501 CRYST1 119.790 43.092 74.430 90.00 120.85 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008348 0.000000 0.004987 0.00000 SCALE2 0.000000 0.023206 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015650 0.00000