HEADER HYDROLASE 16-JUN-16 5KIJ TITLE CRYSTAL STRUCTURE OF THE CLASS I HUMAN ENDOPLASMIC RETICULUM 1,2- TITLE 2 ALPHA-MANNOSIDASE AND MAN9GLCNAC2-PA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOPLASMIC RETICULUM MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA- COMPND 3 MANNOSIDASE; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: ER ALPHA-1,2-MANNOSIDASE,ER MANNOSIDASE 1,ERMAN1, COMPND 6 MAN9GLCNAC2-SPECIFIC-PROCESSING ALPHA-MANNOSIDASE,MANNOSIDASE ALPHA COMPND 7 CLASS 1B MEMBER 1; COMPND 8 EC: 3.2.1.113; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAN1B1, UNQ747/PRO1477; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922 KEYWDS ALPHA/ALPHA-BARREL, CATION REPLACEMENT, PROTEIN-GLYCAN INTERACTION, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.KARAVEG,Y.XIANG,K.W.MOREMEN REVDAT 5 27-SEP-23 5KIJ 1 HETSYN LINK REVDAT 4 29-JUL-20 5KIJ 1 COMPND REMARK HETNAM HETSYN REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 25-DEC-19 5KIJ 1 REMARK REVDAT 2 06-SEP-17 5KIJ 1 REMARK REVDAT 1 10-MAY-17 5KIJ 0 JRNL AUTH Y.XIANG,K.KARAVEG,K.W.MOREMEN JRNL TITL SUBSTRATE RECOGNITION AND CATALYSIS BY GH47 JRNL TITL 2 ALPHA-MANNOSIDASES INVOLVED IN ASN-LINKED GLYCAN MATURATION JRNL TITL 3 IN THE MAMMALIAN SECRETORY PATHWAY. JRNL REF PROC. NATL. ACAD. SCI. V. 113 E7890 2016 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 27856750 JRNL DOI 10.1073/PNAS.1611213113 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.030 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 53095 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.760 REMARK 3 FREE R VALUE TEST SET COUNT : 1996 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.0849 - 3.9713 0.99 3739 157 0.1763 0.1947 REMARK 3 2 3.9713 - 3.1537 0.99 3721 151 0.1715 0.2092 REMARK 3 3 3.1537 - 2.7555 0.98 3727 148 0.1937 0.2312 REMARK 3 4 2.7555 - 2.5037 0.98 3700 151 0.1959 0.2283 REMARK 3 5 2.5037 - 2.3244 0.98 3698 136 0.1941 0.2370 REMARK 3 6 2.3244 - 2.1874 0.97 3688 138 0.1805 0.2618 REMARK 3 7 2.1874 - 2.0779 0.97 3635 150 0.1787 0.2347 REMARK 3 8 2.0779 - 1.9875 0.97 3666 145 0.1823 0.1863 REMARK 3 9 1.9875 - 1.9110 0.96 3673 132 0.1818 0.2137 REMARK 3 10 1.9110 - 1.8451 0.96 3606 140 0.1710 0.2454 REMARK 3 11 1.8451 - 1.7874 0.96 3670 135 0.1789 0.2177 REMARK 3 12 1.7874 - 1.7363 0.95 3560 138 0.1834 0.2337 REMARK 3 13 1.7363 - 1.6906 0.94 3569 129 0.1846 0.2454 REMARK 3 14 1.6906 - 1.6493 0.92 3447 146 0.1900 0.2388 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4066 REMARK 3 ANGLE : 0.884 5529 REMARK 3 CHIRALITY : 0.051 605 REMARK 3 PLANARITY : 0.006 691 REMARK 3 DIHEDRAL : 12.486 2426 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5KIJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1000212765. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53113 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.649 REMARK 200 RESOLUTION RANGE LOW (A) : 48.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1X9D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG 4000, 50MM AMMONIUM SULFATE, REMARK 280 0.1M MES, 10% 1,4-BUTANEDIOL, PH 6.5, 200MM NDSB-200, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 298K, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 978 O HOH A 1104 1.98 REMARK 500 O HOH A 1348 O HOH A 1356 2.09 REMARK 500 O HOH A 922 O HOH A 1359 2.10 REMARK 500 O HOH A 1158 O HOH A 1234 2.13 REMARK 500 O HOH A 1202 O HOH A 1247 2.14 REMARK 500 O HOH A 1209 O HOH A 1296 2.14 REMARK 500 O HOH A 937 O HOH A 1344 2.15 REMARK 500 O HOH A 1080 O HOH A 1365 2.15 REMARK 500 O HOH A 1056 O HOH A 1351 2.16 REMARK 500 O HOH A 1013 O HOH A 1229 2.16 REMARK 500 O HOH A 1165 O HOH A 1312 2.19 REMARK 500 O HOH A 1310 O HOH A 1394 2.19 REMARK 500 O HOH A 1283 O HOH A 1397 2.19 REMARK 500 O HOH A 981 O HOH A 1248 2.19 REMARK 500 O HOH A 838 O HOH A 1035 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1029 O HOH A 1195 1545 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 268 22.70 -143.37 REMARK 500 SER A 280 -157.24 -145.51 REMARK 500 SER A 280 -156.59 -141.81 REMARK 500 TRP A 284 -34.81 -131.51 REMARK 500 LYS A 371 -4.42 75.37 REMARK 500 ARG A 461 -2.87 84.29 REMARK 500 GLU A 651 75.89 67.04 REMARK 500 GLU A 663 -60.37 -121.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG B 1 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 LA A 701 LA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 688 O REMARK 620 2 THR A 688 OG1 68.4 REMARK 620 3 HOH A 864 O 85.1 139.5 REMARK 620 4 HOH A 892 O 74.0 69.0 74.7 REMARK 620 5 HOH A 927 O 141.5 137.9 81.4 134.9 REMARK 620 6 HOH A1038 O 136.3 69.9 137.1 102.6 70.8 REMARK 620 7 HOH A1082 O 137.5 107.9 71.5 65.9 70.5 68.8 REMARK 620 8 MAN B 5 O2 83.5 76.7 131.7 144.0 79.1 74.8 138.3 REMARK 620 9 MAN B 5 O3 69.1 123.2 69.4 129.8 72.3 127.5 128.9 62.6 REMARK 620 N 1 2 3 4 5 6 7 8 DBREF 5KIJ A 245 696 UNP Q9UKM7 MA1B1_HUMAN 245 696 SEQRES 1 A 452 HIS LEU ASN TYR ARG GLN LYS GLY VAL ILE ASP VAL PHE SEQRES 2 A 452 LEU HIS ALA TRP LYS GLY TYR ARG LYS PHE ALA TRP GLY SEQRES 3 A 452 HIS ASP GLU LEU LYS PRO VAL SER ARG SER PHE SER GLU SEQRES 4 A 452 TRP PHE GLY LEU GLY LEU THR LEU ILE ASP ALA LEU ASP SEQRES 5 A 452 THR MET TRP ILE LEU GLY LEU ARG LYS GLU PHE GLU GLU SEQRES 6 A 452 ALA ARG LYS TRP VAL SER LYS LYS LEU HIS PHE GLU LYS SEQRES 7 A 452 ASP VAL ASP VAL ASN LEU PHE GLU SER THR ILE ARG ILE SEQRES 8 A 452 LEU GLY GLY LEU LEU SER ALA TYR HIS LEU SER GLY ASP SEQRES 9 A 452 SER LEU PHE LEU ARG LYS ALA GLU ASP PHE GLY ASN ARG SEQRES 10 A 452 LEU MET PRO ALA PHE ARG THR PRO SER LYS ILE PRO TYR SEQRES 11 A 452 SER ASP VAL ASN ILE GLY THR GLY VAL ALA HIS PRO PRO SEQRES 12 A 452 ARG TRP THR SER ASP SER THR VAL ALA GLU VAL THR SER SEQRES 13 A 452 ILE GLN LEU GLU PHE ARG GLU LEU SER ARG LEU THR GLY SEQRES 14 A 452 ASP LYS LYS PHE GLN GLU ALA VAL GLU LYS VAL THR GLN SEQRES 15 A 452 HIS ILE HIS GLY LEU SER GLY LYS LYS ASP GLY LEU VAL SEQRES 16 A 452 PRO MET PHE ILE ASN THR HIS SER GLY LEU PHE THR HIS SEQRES 17 A 452 LEU GLY VAL PHE THR LEU GLY ALA ARG ALA ASP SER TYR SEQRES 18 A 452 TYR GLU TYR LEU LEU LYS GLN TRP ILE GLN GLY GLY LYS SEQRES 19 A 452 GLN GLU THR GLN LEU LEU GLU ASP TYR VAL GLU ALA ILE SEQRES 20 A 452 GLU GLY VAL ARG THR HIS LEU LEU ARG HIS SER GLU PRO SEQRES 21 A 452 SER LYS LEU THR PHE VAL GLY GLU LEU ALA HIS GLY ARG SEQRES 22 A 452 PHE SER ALA LYS MET ASP HIS LEU VAL CYS PHE LEU PRO SEQRES 23 A 452 GLY THR LEU ALA LEU GLY VAL TYR HIS GLY LEU PRO ALA SEQRES 24 A 452 SER HIS MET GLU LEU ALA GLN GLU LEU MET GLU THR CYS SEQRES 25 A 452 TYR GLN MET ASN ARG GLN MET GLU THR GLY LEU SER PRO SEQRES 26 A 452 GLU ILE VAL HIS PHE ASN LEU TYR PRO GLN PRO GLY ARG SEQRES 27 A 452 ARG ASP VAL GLU VAL LYS PRO ALA ASP ARG HIS ASN LEU SEQRES 28 A 452 LEU ARG PRO GLU THR VAL GLU SER LEU PHE TYR LEU TYR SEQRES 29 A 452 ARG VAL THR GLY ASP ARG LYS TYR GLN ASP TRP GLY TRP SEQRES 30 A 452 GLU ILE LEU GLN SER PHE SER ARG PHE THR ARG VAL PRO SEQRES 31 A 452 SER GLY GLY TYR SER SER ILE ASN ASN VAL GLN ASP PRO SEQRES 32 A 452 GLN LYS PRO GLU PRO ARG ASP LYS MET GLU SER PHE PHE SEQRES 33 A 452 LEU GLY GLU THR LEU LYS TYR LEU PHE LEU LEU PHE SER SEQRES 34 A 452 ASP ASP PRO ASN LEU LEU SER LEU ASP ALA TYR VAL PHE SEQRES 35 A 452 ASN THR GLU ALA HIS PRO LEU PRO ILE TRP HET NAG B 1 14 HET BMA B 2 11 HET MAN B 3 11 HET MAN B 4 11 HET MAN B 5 11 HET MAN B 6 11 HET MAN B 7 22 HET MAN B 8 11 HET MAN B 9 11 HET LA A 701 1 HET SO4 A 702 5 HET SO4 A 703 5 HET BU1 A 704 6 HET BU1 A 705 6 HET 1PS A 715 13 HET BU1 A 716 6 HET BU1 A 717 6 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM LA LANTHANUM (III) ION HETNAM SO4 SULFATE ION HETNAM BU1 1,4-BUTANEDIOL HETNAM 1PS 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN 1PS 1-(3-SULFOPROPYL) PYRIDINIUM; PPS FORMUL 2 NAG C8 H15 N O6 FORMUL 2 BMA C6 H12 O6 FORMUL 2 MAN 7(C6 H12 O6) FORMUL 3 LA LA 3+ FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 BU1 4(C4 H10 O2) FORMUL 8 1PS C8 H11 N O3 S FORMUL 11 HOH *605(H2 O) HELIX 1 AA1 ASN A 247 ALA A 268 1 22 HELIX 2 AA2 GLY A 288 LEU A 301 1 14 HELIX 3 AA3 LEU A 303 LEU A 318 1 16 HELIX 4 AA4 LEU A 328 GLY A 347 1 20 HELIX 5 AA5 ASP A 348 MET A 363 1 16 HELIX 6 AA6 PRO A 364 ARG A 367 5 4 HELIX 7 AA7 VAL A 395 THR A 399 1 5 HELIX 8 AA8 ILE A 401 GLY A 413 1 13 HELIX 9 AA9 LYS A 415 GLY A 430 1 16 HELIX 10 AB1 ALA A 462 GLY A 476 1 15 HELIX 11 AB2 GLU A 480 LEU A 498 1 19 HELIX 12 AB3 CYS A 527 HIS A 539 1 13 HELIX 13 AB4 PRO A 542 GLN A 562 1 21 HELIX 14 AB5 LYS A 588 ARG A 592 5 5 HELIX 15 AB6 PRO A 598 GLY A 612 1 15 HELIX 16 AB7 ARG A 614 ARG A 632 1 19 HELIX 17 AB8 GLU A 657 GLU A 663 1 7 HELIX 18 AB9 GLU A 663 SER A 673 1 11 SHEET 1 AA1 2 GLU A 273 LYS A 275 0 SHEET 2 AA1 2 SER A 280 SER A 282 -1 O SER A 280 N LYS A 275 SHEET 1 AA2 3 ASP A 325 ASN A 327 0 SHEET 2 AA2 3 ASP A 376 ASN A 378 -1 O VAL A 377 N VAL A 326 SHEET 3 AA2 3 ALA A 384 HIS A 385 -1 O HIS A 385 N ASP A 376 SHEET 1 AA3 3 SER A 393 THR A 394 0 SHEET 2 AA3 3 PHE A 442 ILE A 443 -1 O ILE A 443 N SER A 393 SHEET 3 AA3 3 PHE A 450 THR A 451 -1 O THR A 451 N PHE A 442 SHEET 1 AA4 3 VAL A 455 PHE A 456 0 SHEET 2 AA4 3 GLU A 512 ALA A 514 -1 O LEU A 513 N PHE A 456 SHEET 3 AA4 3 ARG A 517 SER A 519 -1 O SER A 519 N GLU A 512 SHEET 1 AA5 2 LEU A 499 HIS A 501 0 SHEET 2 AA5 2 THR A 508 VAL A 510 -1 O PHE A 509 N ARG A 500 SHEET 1 AA6 3 LYS A 521 ASP A 523 0 SHEET 2 AA6 3 ILE A 571 PHE A 574 -1 O VAL A 572 N MET A 522 SHEET 3 AA6 3 VAL A 585 GLU A 586 -1 O GLU A 586 N HIS A 573 SHEET 1 AA7 2 TYR A 684 PHE A 686 0 SHEET 2 AA7 2 PRO A 692 PRO A 694 -1 O LEU A 693 N VAL A 685 SSBOND 1 CYS A 527 CYS A 556 1555 1555 2.02 LINK O4 NAG B 1 C1 BMA B 2 1555 1555 1.44 LINK O6 BMA B 2 C1 MAN B 3 1555 1555 1.45 LINK O3 BMA B 2 C1 MAN B 8 1555 1555 1.44 LINK O3 MAN B 3 C1 MAN B 4 1555 1555 1.45 LINK O6 MAN B 3 C1 MAN B 6 1555 1555 1.44 LINK O2 MAN B 4 C1 MAN B 5 1555 1555 1.44 LINK O2 MAN B 6 C1 AMAN B 7 1555 1555 1.45 LINK O2 MAN B 6 C1 BMAN B 7 1555 1555 1.45 LINK O2 MAN B 8 C1 MAN B 9 1555 1555 1.44 LINK O THR A 688 LA LA A 701 1555 1555 2.57 LINK OG1 THR A 688 LA LA A 701 1555 1555 2.54 LINK LA LA A 701 O HOH A 864 1555 1555 2.48 LINK LA LA A 701 O HOH A 892 1555 1555 2.67 LINK LA LA A 701 O HOH A 927 1555 1555 2.54 LINK LA LA A 701 O HOH A1038 1555 1555 2.41 LINK LA LA A 701 O HOH A1082 1555 1555 2.52 LINK LA LA A 701 O2 MAN B 5 1555 1555 2.62 LINK LA LA A 701 O3 MAN B 5 1555 1555 2.55 CISPEP 1 GLU A 503 PRO A 504 0 7.26 CRYST1 50.625 53.830 56.118 89.65 63.60 62.70 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019753 -0.010197 -0.012741 0.00000 SCALE2 0.000000 0.020906 0.005365 0.00000 SCALE3 0.000000 0.000000 0.020539 0.00000