HEADER TRANSFERASE 20-JUN-16 5KJV TITLE CRYSTAL STRUCTURE OF COLEUS BLUMEI HCT COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYDROXYCINNAMOYL TRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.3.1.133; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLECTRANTHUS SCUTELLARIOIDES; SOURCE 3 ORGANISM_COMMON: COLEUS; SOURCE 4 ORGANISM_TAXID: 4142; SOURCE 5 GENE: CBHCT2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS PHENYLPROPANOID METABOLISM, BAHD, HCT, ACYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR O.LEVSH,Y.C.CHIANG,C.F.TUNG,J.P.NOEL,Y.WANG,J.K.WENG REVDAT 6 06-MAR-24 5KJV 1 REMARK REVDAT 5 20-NOV-19 5KJV 1 REMARK REVDAT 4 20-SEP-17 5KJV 1 REMARK REVDAT 3 21-DEC-16 5KJV 1 JRNL REVDAT 2 16-NOV-16 5KJV 1 JRNL REVDAT 1 02-NOV-16 5KJV 0 JRNL AUTH O.LEVSH,Y.C.CHIANG,C.F.TUNG,J.P.NOEL,Y.WANG,J.K.WENG JRNL TITL DYNAMIC CONFORMATIONAL STATES DICTATE SELECTIVITY TOWARD THE JRNL TITL 2 NATIVE SUBSTRATE IN A SUBSTRATE-PERMISSIVE ACYLTRANSFERASE. JRNL REF BIOCHEMISTRY V. 55 6314 2016 JRNL REFN ISSN 1520-4995 JRNL PMID 27805809 JRNL DOI 10.1021/ACS.BIOCHEM.6B00887 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1839 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.050 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.1 REMARK 3 NUMBER OF REFLECTIONS : 152836 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.620 REMARK 3 FREE R VALUE TEST SET COUNT : 4002 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.4747 - 5.3746 0.98 5540 156 0.1453 0.1537 REMARK 3 2 5.3746 - 4.2667 0.98 5606 152 0.1137 0.1549 REMARK 3 3 4.2667 - 3.7275 0.98 5543 146 0.1262 0.1491 REMARK 3 4 3.7275 - 3.3868 0.97 5500 156 0.1373 0.1676 REMARK 3 5 3.3868 - 3.1441 0.97 5524 146 0.1560 0.2142 REMARK 3 6 3.1441 - 2.9587 0.97 5580 148 0.1671 0.2130 REMARK 3 7 2.9587 - 2.8106 0.97 5534 138 0.1753 0.2160 REMARK 3 8 2.8106 - 2.6882 0.97 5468 136 0.1693 0.2176 REMARK 3 9 2.6882 - 2.5848 0.95 5490 156 0.1658 0.2093 REMARK 3 10 2.5848 - 2.4956 0.96 5380 150 0.1613 0.2168 REMARK 3 11 2.4956 - 2.4175 0.96 5558 144 0.1595 0.1948 REMARK 3 12 2.4175 - 2.3484 0.97 5454 142 0.1653 0.2230 REMARK 3 13 2.3484 - 2.2866 0.95 5530 140 0.1622 0.2137 REMARK 3 14 2.2866 - 2.2308 0.96 5375 156 0.1873 0.2441 REMARK 3 15 2.2308 - 2.1801 0.95 5443 154 0.1808 0.2320 REMARK 3 16 2.1801 - 2.1337 0.96 5482 140 0.1809 0.2437 REMARK 3 17 2.1337 - 2.0910 0.97 5466 148 0.1844 0.2323 REMARK 3 18 2.0910 - 2.0516 0.93 5413 141 0.2114 0.2860 REMARK 3 19 2.0516 - 2.0149 0.95 5379 154 0.2177 0.2521 REMARK 3 20 2.0149 - 1.9808 0.96 5320 158 0.2205 0.2743 REMARK 3 21 1.9808 - 1.9488 0.92 5388 140 0.2326 0.2568 REMARK 3 22 1.9488 - 1.9188 0.93 5297 144 0.2496 0.2561 REMARK 3 23 1.9188 - 1.8906 0.93 5188 133 0.2728 0.3386 REMARK 3 24 1.8906 - 1.8640 0.91 5205 128 0.2689 0.3310 REMARK 3 25 1.8640 - 1.8388 0.89 5130 144 0.2591 0.2827 REMARK 3 26 1.8388 - 1.8149 0.88 4997 126 0.2678 0.3285 REMARK 3 27 1.8149 - 1.7922 0.70 3898 104 0.2674 0.3427 REMARK 3 28 1.7922 - 1.7706 0.38 2174 76 0.2852 0.2690 REMARK 3 29 1.7706 - 1.7500 0.34 1972 46 0.2599 0.3782 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 6832 REMARK 3 ANGLE : 1.459 9306 REMARK 3 CHIRALITY : 0.052 1024 REMARK 3 PLANARITY : 0.008 1212 REMARK 3 DIHEDRAL : 13.244 2484 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -42.0732 17.8632 -4.1140 REMARK 3 T TENSOR REMARK 3 T11: 0.0318 T22: 0.0756 REMARK 3 T33: 0.0802 T12: -0.0052 REMARK 3 T13: -0.0061 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: -0.0142 L22: 0.0834 REMARK 3 L33: 0.6488 L12: -0.0074 REMARK 3 L13: -0.1038 L23: 0.0554 REMARK 3 S TENSOR REMARK 3 S11: 0.0209 S12: 0.0119 S13: 0.0069 REMARK 3 S21: 0.0049 S22: 0.0071 S23: -0.0032 REMARK 3 S31: 0.0039 S32: -0.0311 S33: 0.0026 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5KJV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1000222293. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 199588 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 53.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.2 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS:HCL, 25% PEG 3350, PH REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH22 ARG B 6 O HOH B 502 1.25 REMARK 500 HE21 GLN A 342 O HOH A 503 1.40 REMARK 500 HH22 ARG B 367 O HOH B 505 1.44 REMARK 500 HH22 ARG A 6 O HOH A 511 1.49 REMARK 500 HH TYR A 212 O HOH A 519 1.56 REMARK 500 HG1 THR A 243 O HOH A 507 1.60 REMARK 500 O HOH B 875 O HOH B 927 1.92 REMARK 500 O HOH A 645 O HOH A 652 1.94 REMARK 500 O HOH A 602 O HOH A 781 1.96 REMARK 500 OD2 ASP B 122 O HOH B 501 1.96 REMARK 500 O HOH B 553 O HOH B 834 1.97 REMARK 500 O HOH B 644 O HOH B 946 1.97 REMARK 500 O HOH B 681 O HOH B 773 1.98 REMARK 500 O HOH B 887 O HOH B 962 1.99 REMARK 500 O HOH A 852 O HOH A 899 2.00 REMARK 500 O HOH B 935 O HOH B 980 2.02 REMARK 500 O HOH B 674 O HOH B 814 2.03 REMARK 500 O HOH B 835 O HOH B 936 2.04 REMARK 500 O HOH A 625 O HOH A 752 2.04 REMARK 500 O HOH A 528 O HOH A 549 2.05 REMARK 500 OE1 GLU A 202 O HOH A 501 2.05 REMARK 500 O HOH B 992 O HOH B 993 2.06 REMARK 500 O HOH B 846 O HOH B 921 2.06 REMARK 500 O HOH B 782 O HOH B 988 2.06 REMARK 500 O HOH A 571 O HOH A 793 2.06 REMARK 500 O HOH B 580 O HOH B 897 2.07 REMARK 500 O HOH A 812 O HOH A 895 2.07 REMARK 500 NH2 ARG B 6 O HOH B 502 2.08 REMARK 500 O ALA A 155 NH2 ARG A 185 2.09 REMARK 500 O HOH A 512 O HOH A 517 2.09 REMARK 500 O HOH B 904 O HOH B 949 2.10 REMARK 500 O HOH B 769 O HOH B 890 2.10 REMARK 500 O HOH A 819 O HOH A 941 2.11 REMARK 500 O HOH B 765 O HOH B 935 2.11 REMARK 500 O HOH A 915 O HOH A 919 2.13 REMARK 500 O HOH B 559 O HOH B 924 2.14 REMARK 500 O HOH A 897 O HOH A 1008 2.14 REMARK 500 O HOH A 726 O HOH A 995 2.15 REMARK 500 O HOH A 809 O HOH A 1011 2.15 REMARK 500 O HOH A 549 O HOH A 618 2.16 REMARK 500 O HOH B 799 O HOH B 928 2.17 REMARK 500 OD2 ASP A 103 O HOH A 502 2.17 REMARK 500 O HOH A 780 O HOH A 1037 2.18 REMARK 500 O HOH A 712 O HOH A 904 2.18 REMARK 500 NE2 GLN A 342 O HOH A 503 2.19 REMARK 500 O HOH A 836 O HOH A 938 2.19 REMARK 500 NZ LYS B 235 OXT ILE B 427 2.19 REMARK 500 O HOH B 942 O HOH B 1001 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HB2 PRO A 214 HB2 ARG A 367 1455 1.26 REMARK 500 HG3 PRO A 214 HE ARG A 367 1455 1.27 REMARK 500 OE2 GLU A 97 HH22 ARG B 326 1554 1.54 REMARK 500 OE1 GLU B 213 HH21 ARG B 367 1655 1.59 REMARK 500 O HOH B 649 O HOH B 842 1655 1.78 REMARK 500 O HOH A 994 O HOH A 1046 1655 2.02 REMARK 500 O HOH B 909 O HOH B 917 1645 2.03 REMARK 500 O HOH B 719 O HOH B 763 1655 2.17 REMARK 500 O HOH A 553 O HOH B 604 1554 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO A 214 CA PRO A 214 CB -0.167 REMARK 500 PRO A 214 CB PRO A 214 CG 0.895 REMARK 500 PRO A 214 CG PRO A 214 CD -0.296 REMARK 500 ARG A 367 CB ARG A 367 CG 0.420 REMARK 500 ARG A 367 CG ARG A 367 CD 0.709 REMARK 500 ARG A 367 CD ARG A 367 NE 0.189 REMARK 500 CYS B 357 CB CYS B 357 SG -0.109 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 214 C - N - CA ANGL. DEV. = -24.4 DEGREES REMARK 500 PRO A 214 CA - N - CD ANGL. DEV. = 13.5 DEGREES REMARK 500 ARG A 367 CB - CG - CD ANGL. DEV. = 21.5 DEGREES REMARK 500 ARG A 367 CG - CD - NE ANGL. DEV. = 16.9 DEGREES REMARK 500 ARG A 367 CD - NE - CZ ANGL. DEV. = 13.7 DEGREES REMARK 500 ARG A 367 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 PRO B 214 C - N - CA ANGL. DEV. = -18.1 DEGREES REMARK 500 PRO B 214 C - N - CD ANGL. DEV. = 18.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 67 48.34 -95.63 REMARK 500 ASP A 184 96.45 179.11 REMARK 500 LYS A 210 -31.10 81.48 REMARK 500 ALA A 215 109.71 69.86 REMARK 500 CYS A 357 127.78 -36.49 REMARK 500 ASN B 33 31.61 -87.00 REMARK 500 PHE B 67 46.83 -96.69 REMARK 500 ASP B 184 96.81 -179.20 REMARK 500 HIS B 200 109.80 -50.40 REMARK 500 LYS B 210 -31.71 85.58 REMARK 500 GLU B 213 -114.25 168.04 REMARK 500 ALA B 215 107.32 -44.11 REMARK 500 CYS B 357 130.33 -37.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU B 213 PRO B 214 -117.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1060 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A1061 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH A1062 DISTANCE = 6.68 ANGSTROMS REMARK 525 HOH B1001 DISTANCE = 6.18 ANGSTROMS REMARK 525 HOH B1002 DISTANCE = 6.53 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5KJW RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF COLEUS BLUMEI HCT IN COMPLEX WITH P-COUMAROYL- REMARK 900 COA AND 3-HYDROXYACETOPHENONE DBREF 5KJV A 1 427 UNP E8ZAP2 E8ZAP2_PLESU 1 427 DBREF 5KJV B 1 427 UNP E8ZAP2 E8ZAP2_PLESU 1 427 SEQRES 1 A 427 MET LYS ILE HIS VAL ARG ASP SER THR LEU VAL ARG PRO SEQRES 2 A 427 SER ALA ALA THR PRO ALA VAL SER LEU TRP ASN SER ASN SEQRES 3 A 427 VAL ASP LEU VAL VAL PRO ASN PHE HIS THR PRO SER VAL SEQRES 4 A 427 TYR PHE TYR ARG PRO SER GLY ALA ASP ASN PHE PHE ASP SEQRES 5 A 427 THR ALA VAL MET LYS ALA ALA LEU GLY ARG ALA LEU VAL SEQRES 6 A 427 SER PHE TYR PRO MET ALA GLY ARG LEU LYS ARG ASP GLU SEQRES 7 A 427 ASP GLY ARG VAL GLU ILE ASP CYS ASN ALA GLU GLY VAL SEQRES 8 A 427 LEU PHE VAL GLU ALA GLU SER ASP GLY THR VAL ASP ASP SEQRES 9 A 427 TYR GLY ASP PHE ALA PRO SER LEU GLU LEU ARG ARG LEU SEQRES 10 A 427 ILE PRO ALA VAL ASP TYR SER GLN GLY ILE SER ALA TYR SEQRES 11 A 427 PRO LEU LEU VAL LEU GLN VAL THR PHE PHE LYS CYS GLY SEQRES 12 A 427 GLY VAL SER LEU GLY VAL GLY MET GLN HIS HIS ALA ALA SEQRES 13 A 427 ASP GLY PHE SER GLY LEU HIS PHE ILE ASN THR TRP SER SEQRES 14 A 427 ASP MET ALA ARG GLY LEU ASP ILE THR LEU PRO PRO PHE SEQRES 15 A 427 ILE ASP ARG THR LEU LEU SER ALA ARG ASP PRO PRO GLN SEQRES 16 A 427 PRO GLN PHE LYS HIS VAL GLU TYR GLN PRO PRO PRO ALA SEQRES 17 A 427 MET LYS THR TYR GLU PRO ALA GLU THR VAL VAL SER ILE SEQRES 18 A 427 PHE LYS LEU THR LYS ASP GLN LEU THR THR LEU LYS ALA SEQRES 19 A 427 LYS SER LYS GLU ASP GLY ASN THR THR THR TYR SER SER SEQRES 20 A 427 TYR GLU MET LEU SER GLY HIS VAL TRP ARG CYS THR CYS SEQRES 21 A 427 LEU ALA ARG GLY LEU PRO GLU GLU GLN GLU THR LYS LEU SEQRES 22 A 427 TYR ILE ALA THR ASP GLY ARG SER ARG LEU GLN PRO GLN SEQRES 23 A 427 LEU PRO PRO GLY TYR PHE GLY ASN VAL ILE PHE THR ALA SEQRES 24 A 427 THR PRO LEU ALA VAL ALA GLY ASP LEU GLY SER LYS PRO SEQRES 25 A 427 VAL TRP TYR ALA ALA SER LYS ILE HIS ASP ALA LEU ALA SEQRES 26 A 427 ARG MET ASP ASN ASP TYR LEU ARG SER ALA LEU ASP PHE SEQRES 27 A 427 LEU GLU LEU GLN PRO ASP LEU LYS ALA LEU VAL ARG GLY SEQRES 28 A 427 ALA HIS THR PHE ARG CYS PRO ASN LEU GLY ILE THR SER SEQRES 29 A 427 TRP VAL ARG LEU PRO ILE HIS ASP ALA ASP PHE GLY TRP SEQRES 30 A 427 GLY ARG PRO ILE PHE MET GLY PRO GLY GLY ILE ALA TYR SEQRES 31 A 427 GLU GLY LEU SER PHE VAL LEU PRO SER PRO THR ASN ASP SEQRES 32 A 427 GLY SER LEU SER VAL ALA ILE SER LEU GLN ALA GLU HIS SEQRES 33 A 427 MET LYS LEU PHE GLU LYS LEU LEU TYR GLN ILE SEQRES 1 B 427 MET LYS ILE HIS VAL ARG ASP SER THR LEU VAL ARG PRO SEQRES 2 B 427 SER ALA ALA THR PRO ALA VAL SER LEU TRP ASN SER ASN SEQRES 3 B 427 VAL ASP LEU VAL VAL PRO ASN PHE HIS THR PRO SER VAL SEQRES 4 B 427 TYR PHE TYR ARG PRO SER GLY ALA ASP ASN PHE PHE ASP SEQRES 5 B 427 THR ALA VAL MET LYS ALA ALA LEU GLY ARG ALA LEU VAL SEQRES 6 B 427 SER PHE TYR PRO MET ALA GLY ARG LEU LYS ARG ASP GLU SEQRES 7 B 427 ASP GLY ARG VAL GLU ILE ASP CYS ASN ALA GLU GLY VAL SEQRES 8 B 427 LEU PHE VAL GLU ALA GLU SER ASP GLY THR VAL ASP ASP SEQRES 9 B 427 TYR GLY ASP PHE ALA PRO SER LEU GLU LEU ARG ARG LEU SEQRES 10 B 427 ILE PRO ALA VAL ASP TYR SER GLN GLY ILE SER ALA TYR SEQRES 11 B 427 PRO LEU LEU VAL LEU GLN VAL THR PHE PHE LYS CYS GLY SEQRES 12 B 427 GLY VAL SER LEU GLY VAL GLY MET GLN HIS HIS ALA ALA SEQRES 13 B 427 ASP GLY PHE SER GLY LEU HIS PHE ILE ASN THR TRP SER SEQRES 14 B 427 ASP MET ALA ARG GLY LEU ASP ILE THR LEU PRO PRO PHE SEQRES 15 B 427 ILE ASP ARG THR LEU LEU SER ALA ARG ASP PRO PRO GLN SEQRES 16 B 427 PRO GLN PHE LYS HIS VAL GLU TYR GLN PRO PRO PRO ALA SEQRES 17 B 427 MET LYS THR TYR GLU PRO ALA GLU THR VAL VAL SER ILE SEQRES 18 B 427 PHE LYS LEU THR LYS ASP GLN LEU THR THR LEU LYS ALA SEQRES 19 B 427 LYS SER LYS GLU ASP GLY ASN THR THR THR TYR SER SER SEQRES 20 B 427 TYR GLU MET LEU SER GLY HIS VAL TRP ARG CYS THR CYS SEQRES 21 B 427 LEU ALA ARG GLY LEU PRO GLU GLU GLN GLU THR LYS LEU SEQRES 22 B 427 TYR ILE ALA THR ASP GLY ARG SER ARG LEU GLN PRO GLN SEQRES 23 B 427 LEU PRO PRO GLY TYR PHE GLY ASN VAL ILE PHE THR ALA SEQRES 24 B 427 THR PRO LEU ALA VAL ALA GLY ASP LEU GLY SER LYS PRO SEQRES 25 B 427 VAL TRP TYR ALA ALA SER LYS ILE HIS ASP ALA LEU ALA SEQRES 26 B 427 ARG MET ASP ASN ASP TYR LEU ARG SER ALA LEU ASP PHE SEQRES 27 B 427 LEU GLU LEU GLN PRO ASP LEU LYS ALA LEU VAL ARG GLY SEQRES 28 B 427 ALA HIS THR PHE ARG CYS PRO ASN LEU GLY ILE THR SER SEQRES 29 B 427 TRP VAL ARG LEU PRO ILE HIS ASP ALA ASP PHE GLY TRP SEQRES 30 B 427 GLY ARG PRO ILE PHE MET GLY PRO GLY GLY ILE ALA TYR SEQRES 31 B 427 GLU GLY LEU SER PHE VAL LEU PRO SER PRO THR ASN ASP SEQRES 32 B 427 GLY SER LEU SER VAL ALA ILE SER LEU GLN ALA GLU HIS SEQRES 33 B 427 MET LYS LEU PHE GLU LYS LEU LEU TYR GLN ILE FORMUL 3 HOH *1064(H2 O) HELIX 1 AA1 SER A 25 VAL A 30 1 6 HELIX 2 AA2 ASP A 52 PHE A 67 1 16 HELIX 3 AA3 TYR A 68 GLY A 72 5 5 HELIX 4 AA4 THR A 101 GLY A 106 5 6 HELIX 5 AA5 SER A 111 ILE A 118 5 8 HELIX 6 AA6 ASP A 157 ARG A 173 1 17 HELIX 7 AA7 ASP A 184 SER A 189 5 6 HELIX 8 AA8 HIS A 200 GLN A 204 5 5 HELIX 9 AA9 THR A 225 LYS A 235 1 11 HELIX 10 AB1 SER A 236 ASN A 241 5 6 HELIX 11 AB2 SER A 246 ARG A 263 1 18 HELIX 12 AB3 ARG A 280 ARG A 282 5 3 HELIX 13 AB4 ALA A 305 LYS A 311 1 7 HELIX 14 AB5 PRO A 312 ARG A 326 1 15 HELIX 15 AB6 ASP A 328 LEU A 341 1 14 HELIX 16 AB7 ASP A 344 VAL A 349 5 6 HELIX 17 AB8 GLY A 351 ARG A 356 1 6 HELIX 18 AB9 ALA A 414 TYR A 425 1 12 HELIX 19 AC1 SER B 25 VAL B 30 1 6 HELIX 20 AC2 ASP B 52 PHE B 67 1 16 HELIX 21 AC3 TYR B 68 GLY B 72 5 5 HELIX 22 AC4 THR B 101 GLY B 106 5 6 HELIX 23 AC5 SER B 111 ILE B 118 5 8 HELIX 24 AC6 ASP B 157 ARG B 173 1 17 HELIX 25 AC7 ASP B 184 SER B 189 5 6 HELIX 26 AC8 HIS B 200 GLN B 204 5 5 HELIX 27 AC9 THR B 225 LYS B 235 1 11 HELIX 28 AD1 SER B 236 ASN B 241 5 6 HELIX 29 AD2 SER B 246 ARG B 263 1 18 HELIX 30 AD3 ALA B 305 LYS B 311 1 7 HELIX 31 AD4 PRO B 312 ARG B 326 1 15 HELIX 32 AD5 ASP B 328 GLN B 342 1 15 HELIX 33 AD6 ASP B 344 VAL B 349 5 6 HELIX 34 AD7 GLY B 351 ARG B 356 1 6 HELIX 35 AD8 GLN B 413 TYR B 425 1 13 SHEET 1 AA1 6 ILE A 3 VAL A 11 0 SHEET 2 AA1 6 VAL A 91 SER A 98 -1 O VAL A 91 N VAL A 11 SHEET 3 AA1 6 LEU A 133 PHE A 140 1 O VAL A 137 N ALA A 96 SHEET 4 AA1 6 VAL A 145 GLN A 152 -1 O GLY A 150 N VAL A 134 SHEET 5 AA1 6 HIS A 35 TYR A 42 -1 N THR A 36 O MET A 151 SHEET 6 AA1 6 PHE A 382 PRO A 385 -1 O GLY A 384 N VAL A 39 SHEET 1 AA2 3 VAL A 20 LEU A 22 0 SHEET 2 AA2 3 VAL A 82 CYS A 86 -1 O ILE A 84 N LEU A 22 SHEET 3 AA2 3 ARG A 73 ARG A 76 -1 N ARG A 73 O ASP A 85 SHEET 1 AA3 6 THR A 217 LEU A 224 0 SHEET 2 AA3 6 LEU A 406 GLN A 413 -1 O LEU A 406 N LEU A 224 SHEET 3 AA3 6 LEU A 393 PRO A 398 -1 N PHE A 395 O ALA A 409 SHEET 4 AA3 6 LEU A 360 SER A 364 1 N THR A 363 O SER A 394 SHEET 5 AA3 6 GLU A 270 ASP A 278 1 N TYR A 274 O LEU A 360 SHEET 6 AA3 6 ILE A 296 ALA A 299 -1 O PHE A 297 N THR A 277 SHEET 1 AA4 6 THR A 217 LEU A 224 0 SHEET 2 AA4 6 LEU A 406 GLN A 413 -1 O LEU A 406 N LEU A 224 SHEET 3 AA4 6 LEU A 393 PRO A 398 -1 N PHE A 395 O ALA A 409 SHEET 4 AA4 6 LEU A 360 SER A 364 1 N THR A 363 O SER A 394 SHEET 5 AA4 6 GLU A 270 ASP A 278 1 N TYR A 274 O LEU A 360 SHEET 6 AA4 6 LEU A 302 VAL A 304 -1 O ALA A 303 N THR A 271 SHEET 1 AA5 6 ILE B 3 VAL B 11 0 SHEET 2 AA5 6 VAL B 91 SER B 98 -1 O GLU B 97 N HIS B 4 SHEET 3 AA5 6 LEU B 133 PHE B 139 1 O PHE B 139 N ALA B 96 SHEET 4 AA5 6 VAL B 145 GLN B 152 -1 O GLY B 148 N GLN B 136 SHEET 5 AA5 6 HIS B 35 TYR B 42 -1 N THR B 36 O MET B 151 SHEET 6 AA5 6 PHE B 382 PRO B 385 -1 O GLY B 384 N VAL B 39 SHEET 1 AA6 3 VAL B 20 LEU B 22 0 SHEET 2 AA6 3 VAL B 82 CYS B 86 -1 O ILE B 84 N LEU B 22 SHEET 3 AA6 3 ARG B 73 ARG B 76 -1 N ARG B 73 O ASP B 85 SHEET 1 AA7 6 VAL B 218 LEU B 224 0 SHEET 2 AA7 6 LEU B 406 LEU B 412 -1 O LEU B 412 N VAL B 218 SHEET 3 AA7 6 LEU B 393 PRO B 398 -1 N LEU B 397 O SER B 407 SHEET 4 AA7 6 LEU B 360 SER B 364 1 N THR B 363 O SER B 394 SHEET 5 AA7 6 GLU B 270 ASP B 278 1 N TYR B 274 O LEU B 360 SHEET 6 AA7 6 ILE B 296 ALA B 299 -1 O PHE B 297 N THR B 277 SHEET 1 AA8 6 VAL B 218 LEU B 224 0 SHEET 2 AA8 6 LEU B 406 LEU B 412 -1 O LEU B 412 N VAL B 218 SHEET 3 AA8 6 LEU B 393 PRO B 398 -1 N LEU B 397 O SER B 407 SHEET 4 AA8 6 LEU B 360 SER B 364 1 N THR B 363 O SER B 394 SHEET 5 AA8 6 GLU B 270 ASP B 278 1 N TYR B 274 O LEU B 360 SHEET 6 AA8 6 LEU B 302 VAL B 304 -1 O ALA B 303 N THR B 271 CISPEP 1 ASP A 192 PRO A 193 0 -0.89 CISPEP 2 GLN A 284 PRO A 285 0 -7.58 CISPEP 3 CYS A 357 PRO A 358 0 10.58 CISPEP 4 ASP B 192 PRO B 193 0 -1.53 CISPEP 5 GLU B 216 THR B 217 0 -19.80 CISPEP 6 GLN B 284 PRO B 285 0 -3.16 CISPEP 7 CYS B 357 PRO B 358 0 13.62 CRYST1 37.550 56.690 107.840 83.22 89.65 72.29 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026631 -0.008504 0.000881 0.00000 SCALE2 0.000000 0.018517 -0.002276 0.00000 SCALE3 0.000000 0.000000 0.009343 0.00000