HEADER ISOMERASE 23-JUN-16 5KL0 TITLE CRYSTAL STRUCTURE OF PHOSPHOGLUCOMUTASE FROM XANTHOMONAS CITRI CITRI TITLE 2 COMPLEXED WITH GLUCOSE-1,6-BIPHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOGLUCOMUTASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XANTHOMONAS AXONOPODIS PV. CITRI (STRAIN 306); SOURCE 3 ORGANISM_TAXID: 190486; SOURCE 4 STRAIN: 306; SOURCE 5 GENE: XANA, XAC3579; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS PHOSPHOGLUCOMUTASE CITRUS CANKER, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.S.GOTO,H.M.PEREIRA,M.T.M.NOVO MANSUR REVDAT 7 27-SEP-23 5KL0 1 HETSYN REVDAT 6 29-JUL-20 5KL0 1 COMPND REMARK HETNAM SITE REVDAT 5 01-JAN-20 5KL0 1 REMARK REVDAT 4 17-APR-19 5KL0 1 JRNL REMARK REVDAT 3 28-SEP-16 5KL0 1 JRNL REVDAT 2 07-SEP-16 5KL0 1 JRNL REVDAT 1 13-JUL-16 5KL0 0 SPRSDE 13-JUL-16 5KL0 5BMR JRNL AUTH L.S.GOTO,A.VESSONI ALEXANDRINO,C.MALVESSI PEREIRA, JRNL AUTH 2 C.SILVA MARTINS,H.D'MUNIZ PEREIRA,J.BRANDAO-NETO, JRNL AUTH 3 M.T.MARQUES NOVO-MANSUR JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF THE JRNL TITL 2 PHOSPHOGLUCOMUTASE FROM XANTHOMONAS CITRI SUBSP. CITRI. JRNL REF BIOCHIM.BIOPHYS.ACTA V.1864 1658 2016 JRNL REFN ISSN 0006-3002 JRNL PMID 27567706 JRNL DOI 10.1016/J.BBAPAP.2016.08.014 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 35633 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.148 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1782 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.6144 - 4.3425 0.98 2814 149 0.1440 0.1654 REMARK 3 2 4.3425 - 3.4529 0.99 2693 141 0.1287 0.1554 REMARK 3 3 3.4529 - 3.0182 0.99 2690 142 0.1561 0.2056 REMARK 3 4 3.0182 - 2.7431 0.99 2645 139 0.1597 0.2153 REMARK 3 5 2.7431 - 2.5469 0.99 2668 141 0.1554 0.1832 REMARK 3 6 2.5469 - 2.3970 1.00 2649 139 0.1480 0.1851 REMARK 3 7 2.3970 - 2.2772 0.99 2612 137 0.1464 0.2118 REMARK 3 8 2.2772 - 2.1782 0.99 2610 138 0.1396 0.1848 REMARK 3 9 2.1782 - 2.0944 0.99 2584 136 0.1343 0.1817 REMARK 3 10 2.0944 - 2.0222 0.99 2617 138 0.1408 0.1779 REMARK 3 11 2.0222 - 1.9591 0.99 2594 136 0.1427 0.1930 REMARK 3 12 1.9591 - 1.9031 0.94 2464 130 0.1514 0.2154 REMARK 3 13 1.9031 - 1.8530 0.84 2211 116 0.1601 0.1998 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3544 REMARK 3 ANGLE : 0.893 4814 REMARK 3 CHIRALITY : 0.059 530 REMARK 3 PLANARITY : 0.006 636 REMARK 3 DIHEDRAL : 13.252 2108 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.3340 -16.2338 17.4241 REMARK 3 T TENSOR REMARK 3 T11: 0.0954 T22: 0.1115 REMARK 3 T33: 0.1068 T12: 0.0227 REMARK 3 T13: 0.0068 T23: -0.0318 REMARK 3 L TENSOR REMARK 3 L11: 0.7752 L22: 1.4834 REMARK 3 L33: 2.2893 L12: -0.0266 REMARK 3 L13: -0.1439 L23: 1.1838 REMARK 3 S TENSOR REMARK 3 S11: -0.0400 S12: 0.0753 S13: -0.0864 REMARK 3 S21: -0.0539 S22: 0.0109 S23: 0.0464 REMARK 3 S31: 0.1745 S32: 0.0757 S33: 0.0373 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 182 THROUGH 372 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.0137 0.1127 31.2239 REMARK 3 T TENSOR REMARK 3 T11: 0.0409 T22: 0.0793 REMARK 3 T33: 0.0782 T12: 0.0039 REMARK 3 T13: 0.0041 T23: -0.0177 REMARK 3 L TENSOR REMARK 3 L11: 0.4652 L22: 0.8153 REMARK 3 L33: 1.0936 L12: 0.0069 REMARK 3 L13: -0.1968 L23: -0.2634 REMARK 3 S TENSOR REMARK 3 S11: -0.0104 S12: 0.0224 S13: -0.0065 REMARK 3 S21: -0.0092 S22: -0.0052 S23: -0.0228 REMARK 3 S31: -0.0256 S32: 0.0091 S33: 0.0172 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 373 THROUGH 470 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.9850 8.6500 14.3530 REMARK 3 T TENSOR REMARK 3 T11: 0.0870 T22: 0.0788 REMARK 3 T33: 0.1104 T12: 0.0062 REMARK 3 T13: -0.0006 T23: -0.0268 REMARK 3 L TENSOR REMARK 3 L11: 0.8585 L22: 0.6937 REMARK 3 L33: 2.2060 L12: 0.2526 REMARK 3 L13: 0.6292 L23: -0.1839 REMARK 3 S TENSOR REMARK 3 S11: 0.0145 S12: 0.1597 S13: -0.1042 REMARK 3 S21: -0.1198 S22: 0.0932 S23: 0.0030 REMARK 3 S31: 0.0736 S32: 0.0486 S33: -0.0331 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5KL0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1000222381. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : VARIMAX HF REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35635 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 19.613 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 3.710 REMARK 200 R MERGE (I) : 0.02000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 45.0600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.04100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 22.89 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5BMN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12.5 % PEG 1000, 12.5 % PEG 3350, 12.5 REMARK 280 % MPD, 30 MM MGCL2, 30 MM CACL2, 100 MM MES/IMIDAZOLE PH 6.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.99000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.74750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.39400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 86.74750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.99000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.39400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 4 REMARK 465 GLY A 5 REMARK 465 SER A 6 REMARK 465 SER A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 HIS A 12 REMARK 465 HIS A 13 REMARK 465 SER A 14 REMARK 465 SER A 15 REMARK 465 GLY A 16 REMARK 465 LEU A 17 REMARK 465 VAL A 18 REMARK 465 PRO A 19 REMARK 465 ARG A 20 REMARK 465 GLY A 21 REMARK 465 SER A 22 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 893 O HOH A 949 2.15 REMARK 500 OD2 ASP A 249 O HOH A 601 2.16 REMARK 500 O HOH A 621 O HOH A 853 2.19 REMARK 500 OE2 GLU A 276 O HOH A 602 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 665 O HOH A 949 3455 2.11 REMARK 500 NH2 ARG A 168 OE2 GLU A 238 1655 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 58 -179.33 -64.39 REMARK 500 SEP A 119 -120.47 53.77 REMARK 500 PRO A 122 176.51 -56.84 REMARK 500 ARG A 132 -149.59 -107.09 REMARK 500 ASN A 233 86.93 -161.76 REMARK 500 PHE A 262 35.79 37.95 REMARK 500 THR A 304 -41.30 -135.85 REMARK 500 ALA A 345 36.32 73.70 REMARK 500 PHE A 352 49.11 -89.85 REMARK 500 ASP A 422 89.95 -162.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1104 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH A1105 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH A1106 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH A1107 DISTANCE = 6.75 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SEP A 119 O2P REMARK 620 2 ASP A 259 OD2 83.3 REMARK 620 3 ASP A 261 OD1 87.7 97.2 REMARK 620 4 ASP A 261 OD2 94.5 145.0 47.8 REMARK 620 5 ASP A 263 OD1 175.8 97.9 96.2 86.8 REMARK 620 6 HOH A 608 O 90.2 127.2 135.0 87.7 85.8 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5BMN RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF APO FORM OF PHOSPHOGLUCOMUTASE FROM REMARK 900 XANTHOMONAS CITRI REMARK 900 RELATED ID: 5BMP RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PHOSPHOGLUCOMUTASE FROM XANTHOMONAS CITRI REMARK 900 COMPLEXED WITH GLUCOSE-1-PHOSPHATE DBREF 5KL0 A 23 470 UNP Q8PGN7 Q8PGN7_XANAC 3 450 SEQADV 5KL0 MET A 4 UNP Q8PGN7 INITIATING METHIONINE SEQADV 5KL0 GLY A 5 UNP Q8PGN7 EXPRESSION TAG SEQADV 5KL0 SER A 6 UNP Q8PGN7 EXPRESSION TAG SEQADV 5KL0 SER A 7 UNP Q8PGN7 EXPRESSION TAG SEQADV 5KL0 HIS A 8 UNP Q8PGN7 EXPRESSION TAG SEQADV 5KL0 HIS A 9 UNP Q8PGN7 EXPRESSION TAG SEQADV 5KL0 HIS A 10 UNP Q8PGN7 EXPRESSION TAG SEQADV 5KL0 HIS A 11 UNP Q8PGN7 EXPRESSION TAG SEQADV 5KL0 HIS A 12 UNP Q8PGN7 EXPRESSION TAG SEQADV 5KL0 HIS A 13 UNP Q8PGN7 EXPRESSION TAG SEQADV 5KL0 SER A 14 UNP Q8PGN7 EXPRESSION TAG SEQADV 5KL0 SER A 15 UNP Q8PGN7 EXPRESSION TAG SEQADV 5KL0 GLY A 16 UNP Q8PGN7 EXPRESSION TAG SEQADV 5KL0 LEU A 17 UNP Q8PGN7 EXPRESSION TAG SEQADV 5KL0 VAL A 18 UNP Q8PGN7 EXPRESSION TAG SEQADV 5KL0 PRO A 19 UNP Q8PGN7 EXPRESSION TAG SEQADV 5KL0 ARG A 20 UNP Q8PGN7 EXPRESSION TAG SEQADV 5KL0 GLY A 21 UNP Q8PGN7 EXPRESSION TAG SEQADV 5KL0 SER A 22 UNP Q8PGN7 EXPRESSION TAG SEQRES 1 A 467 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 467 LEU VAL PRO ARG GLY SER MET THR LEU PRO ALA PHE LYS SEQRES 3 A 467 ALA TYR ASP ILE ARG GLY ARG VAL PRO ASP GLU LEU ASN SEQRES 4 A 467 GLU ASP LEU ALA ARG ARG ILE GLY VAL ALA LEU ALA ALA SEQRES 5 A 467 GLN LEU ASP GLN GLY PRO VAL VAL LEU GLY HIS ASP VAL SEQRES 6 A 467 ARG LEU ALA SER PRO ALA LEU GLN GLU ALA LEU SER ALA SEQRES 7 A 467 GLY LEU ARG ALA SER GLY ARG ASP VAL ILE ASP ILE GLY SEQRES 8 A 467 LEU CYS GLY THR GLU GLU VAL TYR PHE GLN THR ASP TYR SEQRES 9 A 467 LEU LYS ALA ALA GLY GLY VAL MET VAL THR ALA SEP HIS SEQRES 10 A 467 ASN PRO MET ASP TYR ASN GLY MET LYS LEU VAL ARG GLU SEQRES 11 A 467 GLN ALA ARG PRO ILE SER SER ASP THR GLY LEU PHE ALA SEQRES 12 A 467 ILE ARG ASP THR VAL ALA ALA ASP THR ALA ALA PRO GLY SEQRES 13 A 467 GLU PRO THR ALA SER GLU GLN SER ARG THR ASP LYS THR SEQRES 14 A 467 ALA TYR LEU GLU HIS LEU LEU SER TYR VAL ASP ARG SER SEQRES 15 A 467 THR LEU LYS PRO LEU LYS LEU VAL VAL ASN ALA GLY ASN SEQRES 16 A 467 GLY GLY ALA GLY LEU ILE VAL ASP LEU LEU ALA PRO HIS SEQRES 17 A 467 LEU PRO PHE GLU PHE VAL ARG VAL PHE HIS GLU PRO ASP SEQRES 18 A 467 GLY ASN PHE PRO ASN GLY ILE PRO ASN PRO LEU LEU PRO SEQRES 19 A 467 GLU ASN ARG ASP ALA THR ALA LYS ALA VAL LYS ASP ASN SEQRES 20 A 467 GLY ALA ASP PHE GLY ILE ALA TRP ASP GLY ASP PHE ASP SEQRES 21 A 467 ARG CYS PHE PHE PHE ASP HIS THR GLY ARG PHE ILE GLU SEQRES 22 A 467 GLY TYR TYR LEU VAL GLY LEU LEU ALA GLN ALA ILE LEU SEQRES 23 A 467 ALA LYS GLN PRO GLY GLY LYS VAL VAL HIS ASP PRO ARG SEQRES 24 A 467 LEU THR TRP ASN THR VAL GLU GLN VAL GLU GLU ALA GLY SEQRES 25 A 467 GLY ILE PRO VAL LEU CYS LYS SER GLY HIS ALA PHE ILE SEQRES 26 A 467 LYS GLU LYS MET ARG SER GLU ASN ALA VAL TYR GLY GLY SEQRES 27 A 467 GLU MET SER ALA HIS HIS TYR PHE ARG GLU PHE ALA TYR SEQRES 28 A 467 ALA ASP SER GLY MET ILE PRO TRP LEU LEU ILE ALA GLU SEQRES 29 A 467 LEU VAL SER GLN SER GLY ARG SER LEU ALA ASP LEU VAL SEQRES 30 A 467 GLU ALA ARG MET GLN LYS PHE PRO CYS SER GLY GLU ILE SEQRES 31 A 467 ASN PHE LYS VAL ALA ASP ALA LYS ALA SER VAL ALA ARG SEQRES 32 A 467 VAL MET GLU HIS TYR ALA SER LEU SER PRO GLU LEU ASP SEQRES 33 A 467 TYR THR ASP GLY ILE SER ALA ASP PHE GLY GLN TRP ARG SEQRES 34 A 467 PHE ASN LEU ARG SER SER ASN THR GLU PRO LEU LEU ARG SEQRES 35 A 467 LEU ASN VAL GLU THR ARG GLY ASP ALA ALA LEU LEU GLU SEQRES 36 A 467 THR ARG THR GLN GLU ILE SER ASN LEU LEU ARG GLY MODRES 5KL0 SEP A 119 SER MODIFIED RESIDUE HET SEP A 119 10 HET G16 A 501 20 HET MG A 502 1 HETNAM SEP PHOSPHOSERINE HETNAM G16 1,6-DI-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE HETNAM MG MAGNESIUM ION HETSYN SEP PHOSPHONOSERINE HETSYN G16 ALPHA-D-GLUCOSE 1,6-BISPHOSPHATE; 1,6-DI-O-PHOSPHONO- HETSYN 2 G16 ALPHA-D-GLUCOSE; 1,6-DI-O-PHOSPHONO-D-GLUCOSE; 1,6-DI- HETSYN 3 G16 O-PHOSPHONO-GLUCOSE FORMUL 1 SEP C3 H8 N O6 P FORMUL 2 G16 C6 H13 O12 P2 1- FORMUL 3 MG MG 2+ FORMUL 4 HOH *507(H2 O) HELIX 1 AA1 ASN A 42 LEU A 57 1 16 HELIX 2 AA2 ALA A 71 SER A 86 1 16 HELIX 3 AA3 GLY A 97 LEU A 108 1 12 HELIX 4 AA4 ARG A 132 ARG A 136 5 5 HELIX 5 AA5 GLY A 143 ASP A 154 1 12 HELIX 6 AA6 LYS A 171 SER A 180 1 10 HELIX 7 AA7 TYR A 181 VAL A 182 5 2 HELIX 8 AA8 ASP A 183 LEU A 187 5 5 HELIX 9 AA9 GLY A 200 ALA A 209 1 10 HELIX 10 AB1 PRO A 210 LEU A 212 5 3 HELIX 11 AB2 LEU A 236 GLY A 251 1 16 HELIX 12 AB3 GLU A 276 GLN A 292 1 17 HELIX 13 AB4 THR A 304 ALA A 314 1 11 HELIX 14 AB5 GLY A 324 ASN A 336 1 13 HELIX 15 AB6 MET A 359 GLY A 373 1 15 HELIX 16 AB7 SER A 375 PHE A 387 1 13 HELIX 17 AB8 ASP A 399 ALA A 412 1 14 HELIX 18 AB9 SER A 413 SER A 415 5 3 HELIX 19 AC1 ASP A 453 GLY A 470 1 18 SHEET 1 AA1 6 ILE A 33 ARG A 36 0 SHEET 2 AA1 6 TYR A 125 VAL A 131 -1 O MET A 128 N ILE A 33 SHEET 3 AA1 6 GLY A 112 VAL A 116 -1 N GLY A 113 O VAL A 131 SHEET 4 AA1 6 VAL A 62 HIS A 66 1 N GLY A 65 O VAL A 116 SHEET 5 AA1 6 VAL A 90 LEU A 95 1 O ILE A 91 N LEU A 64 SHEET 6 AA1 6 GLU A 165 SER A 167 1 O GLN A 166 N ASP A 92 SHEET 1 AA2 4 GLU A 215 VAL A 219 0 SHEET 2 AA2 4 LYS A 191 ASN A 195 1 N VAL A 194 O VAL A 219 SHEET 3 AA2 4 PHE A 254 TRP A 258 1 O ILE A 256 N VAL A 193 SHEET 4 AA2 4 CYS A 265 PHE A 268 -1 O PHE A 268 N GLY A 255 SHEET 1 AA3 5 ILE A 317 LEU A 320 0 SHEET 2 AA3 5 LYS A 296 HIS A 299 1 N VAL A 297 O ILE A 317 SHEET 3 AA3 5 TYR A 339 GLU A 342 1 O TYR A 339 N VAL A 298 SHEET 4 AA3 5 HIS A 346 PHE A 349 -1 O TYR A 348 N GLY A 340 SHEET 5 AA3 5 ALA A 355 ASP A 356 -1 O ALA A 355 N PHE A 349 SHEET 1 AA4 5 ILE A 393 PHE A 395 0 SHEET 2 AA4 5 LEU A 444 THR A 450 -1 O LEU A 446 N ILE A 393 SHEET 3 AA4 5 TRP A 431 SER A 437 -1 N ARG A 436 O ARG A 445 SHEET 4 AA4 5 ILE A 424 ASP A 427 -1 N ALA A 426 O PHE A 433 SHEET 5 AA4 5 GLU A 417 ASP A 419 -1 N ASP A 419 O SER A 425 LINK C ALA A 118 N SEP A 119 1555 1555 1.33 LINK C SEP A 119 N HIS A 120 1555 1555 1.33 LINK O2P SEP A 119 MG MG A 502 1555 1555 1.83 LINK OD2 ASP A 259 MG MG A 502 1555 1555 2.12 LINK OD1 ASP A 261 MG MG A 502 1555 1555 2.02 LINK OD2 ASP A 261 MG MG A 502 1555 1555 2.93 LINK OD1 ASP A 263 MG MG A 502 1555 1555 2.07 LINK MG MG A 502 O HOH A 608 1555 1555 2.32 CISPEP 1 VAL A 37 PRO A 38 0 9.15 CRYST1 43.980 54.788 173.495 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022738 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018252 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005764 0.00000