data_5KN9 # _entry.id 5KN9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5KN9 pdb_00005kn9 10.2210/pdb5kn9/pdb WWPDB D_1000222492 ? ? # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 5KN8 _pdbx_database_related.db_name PDB _pdbx_database_related.details . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5KN9 _pdbx_database_status.recvd_initial_deposition_date 2016-06-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, L.' 1 'Chakravarthy, S.' 2 'Verdine, G.L.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Biol. Chem.' _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 292 _citation.language ? _citation.page_first 5007 _citation.page_last 5017 _citation.title 'Structural Basis for the Lesion-scanning Mechanism of the MutY DNA Glycosylase.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1074/jbc.M116.757039 _citation.pdbx_database_id_PubMed 28130451 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, L.' 1 ? primary 'Chakravarthy, S.' 2 ? primary 'Verdine, G.L.' 3 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 105.66 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5KN9 _cell.details ? _cell.formula_units_Z ? _cell.length_a 49.878 _cell.length_a_esd ? _cell.length_b 38.759 _cell.length_b_esd ? _cell.length_c 82.960 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KN9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Adenine DNA glycosylase' 26694.490 1 3.2.2.- ? 'UNP residues 1-229' ? 2 polymer syn ;DNA (5'-D(*AP*TP*CP*CP*(8OG)P*GP*TP*GP*CP*T)-3') ; 3051.990 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*AP*GP*CP*AP*CP*AP*GP*GP*AP*T)-3') ; 3078.044 1 ? ? ? ? 4 non-polymer syn 'IRON/SULFUR CLUSTER' 351.640 1 ? ? ? ? 5 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 6 water nat water 18.015 165 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'oxoG:A-specific adenine glycosylase' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMTRETERFPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRYETVIPYFEQFIDRFPTLEALADADED EVLKAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVNGNVMRVLSRLFLV TDDIAKCSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKM ; ;GSHMTRETERFPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRYETVIPYFEQFIDRFPTLEALADADED EVLKAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVNGNVMRVLSRLFLV TDDIAKCSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKM ; A ? 2 polydeoxyribonucleotide no yes '(DA)(DT)(DC)(DC)(8OG)(DG)(DT)(DG)(DC)(DT)' ATCCGGTGCT C ? 3 polydeoxyribonucleotide no no '(DA)(DG)(DC)(DA)(DC)(DA)(DG)(DG)(DA)(DT)' AGCACAGGAT D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 THR n 1 6 ARG n 1 7 GLU n 1 8 THR n 1 9 GLU n 1 10 ARG n 1 11 PHE n 1 12 PRO n 1 13 ALA n 1 14 ARG n 1 15 GLU n 1 16 PHE n 1 17 GLN n 1 18 ARG n 1 19 ASP n 1 20 LEU n 1 21 LEU n 1 22 ASP n 1 23 TRP n 1 24 PHE n 1 25 ALA n 1 26 ARG n 1 27 GLU n 1 28 ARG n 1 29 ARG n 1 30 ASP n 1 31 LEU n 1 32 PRO n 1 33 TRP n 1 34 ARG n 1 35 LYS n 1 36 ASP n 1 37 ARG n 1 38 ASP n 1 39 PRO n 1 40 TYR n 1 41 LYS n 1 42 VAL n 1 43 TRP n 1 44 VAL n 1 45 SER n 1 46 GLU n 1 47 VAL n 1 48 MET n 1 49 LEU n 1 50 GLN n 1 51 GLN n 1 52 THR n 1 53 ARG n 1 54 TYR n 1 55 GLU n 1 56 THR n 1 57 VAL n 1 58 ILE n 1 59 PRO n 1 60 TYR n 1 61 PHE n 1 62 GLU n 1 63 GLN n 1 64 PHE n 1 65 ILE n 1 66 ASP n 1 67 ARG n 1 68 PHE n 1 69 PRO n 1 70 THR n 1 71 LEU n 1 72 GLU n 1 73 ALA n 1 74 LEU n 1 75 ALA n 1 76 ASP n 1 77 ALA n 1 78 ASP n 1 79 GLU n 1 80 ASP n 1 81 GLU n 1 82 VAL n 1 83 LEU n 1 84 LYS n 1 85 ALA n 1 86 TRP n 1 87 GLU n 1 88 GLY n 1 89 LEU n 1 90 GLY n 1 91 TYR n 1 92 TYR n 1 93 SER n 1 94 ARG n 1 95 VAL n 1 96 ARG n 1 97 ASN n 1 98 LEU n 1 99 HIS n 1 100 ALA n 1 101 ALA n 1 102 VAL n 1 103 LYS n 1 104 GLU n 1 105 VAL n 1 106 LYS n 1 107 THR n 1 108 ARG n 1 109 TYR n 1 110 GLY n 1 111 GLY n 1 112 LYS n 1 113 VAL n 1 114 PRO n 1 115 ASP n 1 116 ASP n 1 117 PRO n 1 118 ASP n 1 119 GLU n 1 120 PHE n 1 121 SER n 1 122 ARG n 1 123 LEU n 1 124 LYS n 1 125 GLY n 1 126 VAL n 1 127 GLY n 1 128 PRO n 1 129 TYR n 1 130 THR n 1 131 VAL n 1 132 GLY n 1 133 ALA n 1 134 VAL n 1 135 LEU n 1 136 SER n 1 137 LEU n 1 138 ALA n 1 139 TYR n 1 140 GLY n 1 141 VAL n 1 142 PRO n 1 143 GLU n 1 144 PRO n 1 145 ALA n 1 146 VAL n 1 147 ASN n 1 148 GLY n 1 149 ASN n 1 150 VAL n 1 151 MET n 1 152 ARG n 1 153 VAL n 1 154 LEU n 1 155 SER n 1 156 ARG n 1 157 LEU n 1 158 PHE n 1 159 LEU n 1 160 VAL n 1 161 THR n 1 162 ASP n 1 163 ASP n 1 164 ILE n 1 165 ALA n 1 166 LYS n 1 167 CYS n 1 168 SER n 1 169 THR n 1 170 ARG n 1 171 LYS n 1 172 ARG n 1 173 PHE n 1 174 GLU n 1 175 GLN n 1 176 ILE n 1 177 VAL n 1 178 ARG n 1 179 GLU n 1 180 ILE n 1 181 MET n 1 182 ALA n 1 183 TYR n 1 184 GLU n 1 185 ASN n 1 186 PRO n 1 187 GLY n 1 188 ALA n 1 189 PHE n 1 190 ASN n 1 191 GLU n 1 192 ALA n 1 193 LEU n 1 194 ILE n 1 195 GLU n 1 196 LEU n 1 197 GLY n 1 198 ALA n 1 199 LEU n 1 200 VAL n 1 201 CYS n 1 202 THR n 1 203 PRO n 1 204 ARG n 1 205 ARG n 1 206 PRO n 1 207 SER n 1 208 CYS n 1 209 LEU n 1 210 LEU n 1 211 CYS n 1 212 PRO n 1 213 VAL n 1 214 GLN n 1 215 ALA n 1 216 TYR n 1 217 CYS n 1 218 GLN n 1 219 ALA n 1 220 PHE n 1 221 ALA n 1 222 GLU n 1 223 GLY n 1 224 VAL n 1 225 ALA n 1 226 GLU n 1 227 GLU n 1 228 LEU n 1 229 PRO n 1 230 VAL n 1 231 LYS n 1 232 MET n 2 1 DA n 2 2 DT n 2 3 DC n 2 4 DC n 2 5 8OG n 2 6 DG n 2 7 DT n 2 8 DG n 2 9 DC n 2 10 DT n 3 1 DA n 3 2 DG n 3 3 DC n 3 4 DA n 3 5 DC n 3 6 DA n 3 7 DG n 3 8 DG n 3 9 DA n 3 10 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene mutY _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name ' Geobacillus stearothermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1422 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 10 'Geobacillus stearothermophilus' ? 1422 ? 3 1 sample 1 10 'Geobacillus stearothermophilus' ? 1422 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP MUTY_GEOSE P83847 ? 1 ;MTRETERFPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVL KAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVDGNVMRVLSRLFLVTDD IAKPSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKM ; 1 2 PDB 5KN9 5KN9 ? 2 ? 1 3 PDB 5KN9 5KN9 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5KN9 A 4 ? 232 ? P83847 1 ? 229 ? 1 229 2 2 5KN9 C 1 ? 10 ? 5KN9 3 ? 12 ? 3 12 3 3 5KN9 D 1 ? 10 ? 5KN9 13 ? 22 ? 13 22 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5KN9 GLY A 1 ? UNP P83847 ? ? 'expression tag' -2 1 1 5KN9 SER A 2 ? UNP P83847 ? ? 'expression tag' -1 2 1 5KN9 HIS A 3 ? UNP P83847 ? ? 'expression tag' 0 3 1 5KN9 TYR A 54 ? UNP P83847 VAL 51 conflict 51 4 1 5KN9 ASN A 147 ? UNP P83847 ASP 144 conflict 144 5 1 5KN9 CYS A 167 ? UNP P83847 PRO 164 conflict 164 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SF4 non-polymer . 'IRON/SULFUR CLUSTER' ? 'Fe4 S4' 351.640 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5KN9 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47.71 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '300 mM Ca(OAc)2, 14% PEG 4000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-04-25 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97918 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5KN9 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.93 _reflns.d_resolution_low 79.88 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 23193 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.93 _reflns_shell.d_res_low 1.98 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.11 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5KN9 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.930 _refine.ls_d_res_low 79.879 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 23171 _refine.ls_number_reflns_R_free 1187 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.35 _refine.ls_percent_reflns_R_free 5.12 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1718 _refine.ls_R_factor_R_free 0.2287 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1687 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1RRQ _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 23.70 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.22 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1795 _refine_hist.pdbx_number_atoms_nucleic_acid 407 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 165 _refine_hist.number_atoms_total 2377 _refine_hist.d_res_high 1.930 _refine_hist.d_res_low 79.879 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 2327 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.316 ? 3251 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 19.335 ? 897 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.043 ? 348 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 ? 353 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.9302 2.0180 . . 141 2724 100.00 . . . 0.3053 . 0.2298 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0180 2.1244 . . 136 2733 100.00 . . . 0.2666 . 0.2075 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1244 2.2575 . . 155 2751 100.00 . . . 0.2447 . 0.1771 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2575 2.4318 . . 149 2747 100.00 . . . 0.2578 . 0.1803 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4318 2.6766 . . 128 2748 100.00 . . . 0.2676 . 0.1749 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6766 3.0639 . . 156 2753 99.00 . . . 0.2705 . 0.1823 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0639 3.8602 . . 143 2778 99.00 . . . 0.2253 . 0.1470 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.8602 79.9471 . . 179 2750 97.00 . . . 0.1788 . 0.1510 . . . . . . . . . . # _struct.entry_id 5KN9 _struct.title 'MutY N-terminal domain in complex with DNA containing an intrahelical oxoG:A base-pair' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5KN9 _struct_keywords.text 'adenine glycosylase, oxoG, DNA repair protein, intrahelical lesion recognition, Hydrolase-DNA complex' _struct_keywords.pdbx_keywords Hydrolase/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 12 ? ARG A 28 ? PRO A 9 ARG A 25 1 ? 17 HELX_P HELX_P2 AA2 LEU A 31 ? LYS A 35 ? LEU A 28 LYS A 32 5 ? 5 HELX_P HELX_P3 AA3 ASP A 38 ? THR A 52 ? ASP A 35 THR A 49 1 ? 15 HELX_P HELX_P4 AA4 ARG A 53 ? PHE A 68 ? ARG A 50 PHE A 65 1 ? 16 HELX_P HELX_P5 AA5 THR A 70 ? ALA A 77 ? THR A 67 ALA A 74 1 ? 8 HELX_P HELX_P6 AA6 ASP A 78 ? GLU A 87 ? ASP A 75 GLU A 84 1 ? 10 HELX_P HELX_P7 AA7 TYR A 91 ? GLY A 110 ? TYR A 88 GLY A 107 1 ? 20 HELX_P HELX_P8 AA8 ASP A 116 ? ARG A 122 ? ASP A 113 ARG A 119 1 ? 7 HELX_P HELX_P9 AA9 GLY A 127 ? GLY A 140 ? GLY A 124 GLY A 137 1 ? 14 HELX_P HELX_P10 AB1 ASN A 147 ? LEU A 159 ? ASN A 144 LEU A 156 1 ? 13 HELX_P HELX_P11 AB2 LYS A 166 ? MET A 181 ? LYS A 163 MET A 178 1 ? 16 HELX_P HELX_P12 AB3 ASN A 185 ? VAL A 200 ? ASN A 182 VAL A 197 1 ? 16 HELX_P HELX_P13 AB4 SER A 207 ? CYS A 211 ? SER A 204 CYS A 208 5 ? 5 HELX_P HELX_P14 AB5 VAL A 213 ? TYR A 216 ? VAL A 210 TYR A 213 5 ? 4 HELX_P HELX_P15 AB6 CYS A 217 ? GLY A 223 ? CYS A 214 GLY A 220 1 ? 7 HELX_P HELX_P16 AB7 VAL A 224 ? LEU A 228 ? VAL A 221 LEU A 225 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DC 4 "O3'" ? ? ? 1_555 B 8OG 5 P ? ? C DC 6 C 8OG 7 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale2 covale both ? B 8OG 5 "O3'" ? ? ? 1_555 B DG 6 P ? ? C 8OG 7 C DG 8 1_555 ? ? ? ? ? ? ? 1.603 ? ? metalc1 metalc ? ? A SER 121 O ? ? ? 1_555 E CA . CA ? ? A SER 118 A CA 302 1_555 ? ? ? ? ? ? ? 2.278 ? ? metalc2 metalc ? ? A SER 121 OG ? ? ? 1_555 E CA . CA ? ? A SER 118 A CA 302 1_555 ? ? ? ? ? ? ? 2.847 ? ? metalc3 metalc ? ? A VAL 126 O ? ? ? 1_555 E CA . CA ? ? A VAL 123 A CA 302 1_555 ? ? ? ? ? ? ? 2.481 ? ? metalc4 metalc ? ? A CYS 201 SG ? ? ? 1_555 D SF4 . FE2 ? ? A CYS 198 A SF4 301 1_555 ? ? ? ? ? ? ? 2.369 ? ? metalc5 metalc ? ? A CYS 208 SG ? ? ? 1_555 D SF4 . FE1 ? ? A CYS 205 A SF4 301 1_555 ? ? ? ? ? ? ? 2.350 ? ? metalc6 metalc ? ? A CYS 211 SG ? ? ? 1_555 D SF4 . FE3 ? ? A CYS 208 A SF4 301 1_555 ? ? ? ? ? ? ? 2.339 ? ? metalc7 metalc ? ? A CYS 217 SG ? ? ? 1_555 D SF4 . FE4 ? ? A CYS 214 A SF4 301 1_555 ? ? ? ? ? ? ? 2.389 ? ? metalc8 metalc ? ? E CA . CA ? ? ? 1_555 G HOH . O ? ? A CA 302 A HOH 432 1_555 ? ? ? ? ? ? ? 2.304 ? ? metalc9 metalc ? ? E CA . CA ? ? ? 1_555 G HOH . O ? ? A CA 302 A HOH 477 1_555 ? ? ? ? ? ? ? 2.463 ? ? metalc10 metalc ? ? E CA . CA ? ? ? 1_555 G HOH . O ? ? A CA 302 A HOH 497 1_555 ? ? ? ? ? ? ? 2.463 ? ? metalc11 metalc ? ? G HOH . O ? ? ? 1_555 F CA . CA ? ? A HOH 494 C CA 101 1_555 ? ? ? ? ? ? ? 2.571 ? ? metalc12 metalc ? ? G HOH . O ? ? ? 1_555 F CA . CA ? ? A HOH 515 C CA 101 1_555 ? ? ? ? ? ? ? 2.464 ? ? metalc13 metalc ? ? F CA . CA ? ? ? 1_555 H HOH . O ? ? C CA 101 C HOH 204 1_555 ? ? ? ? ? ? ? 2.556 ? ? metalc14 metalc ? ? F CA . CA ? ? ? 1_555 H HOH . O ? ? C CA 101 C HOH 209 1_555 ? ? ? ? ? ? ? 2.695 ? ? metalc15 metalc ? ? F CA . CA ? ? ? 1_555 H HOH . O ? ? C CA 101 C HOH 218 1_555 ? ? ? ? ? ? ? 2.457 ? ? hydrog1 hydrog ? ? B DA 1 N1 ? ? ? 1_555 C DT 10 N3 ? ? C DA 3 D DT 22 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog2 hydrog ? ? B DA 1 N6 ? ? ? 1_555 C DT 10 O2 ? ? C DA 3 D DT 22 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog3 hydrog ? ? B DT 2 N3 ? ? ? 1_555 C DT 10 O4 ? ? C DT 4 D DT 22 1_555 ? ? ? ? ? ? TYPE_12_PAIR ? ? ? hydrog4 hydrog ? ? B DT 2 O4 ? ? ? 1_555 C DT 10 N3 ? ? C DT 4 D DT 22 1_555 ? ? ? ? ? ? TYPE_12_PAIR ? ? ? hydrog5 hydrog ? ? B DC 3 N3 ? ? ? 1_555 C DG 8 N1 ? ? C DC 5 D DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 3 N4 ? ? ? 1_555 C DG 8 O6 ? ? C DC 5 D DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 3 O2 ? ? ? 1_555 C DG 8 N2 ? ? C DC 5 D DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 4 N3 ? ? ? 1_555 C DG 7 N1 ? ? C DC 6 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 4 N4 ? ? ? 1_555 C DG 7 O6 ? ? C DC 6 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 4 O2 ? ? ? 1_555 C DG 7 N2 ? ? C DC 6 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B 8OG 5 O6 ? ? ? 1_555 C DA 6 N6 ? ? C 8OG 7 D DA 18 1_555 ? ? ? ? ? ? '8OG-DA MISPAIR' ? ? ? hydrog12 hydrog ? ? B DG 6 N1 ? ? ? 1_555 C DC 5 N3 ? ? C DG 8 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 6 N2 ? ? ? 1_555 C DC 5 O2 ? ? C DG 8 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 6 O6 ? ? ? 1_555 C DC 5 N4 ? ? C DG 8 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 4 N1 ? ? C DT 9 D DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 4 N6 ? ? C DT 9 D DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 3 N3 ? ? C DG 10 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 3 O2 ? ? C DG 10 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 3 N4 ? ? C DG 10 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DC 9 N3 ? ? ? 1_555 C DG 2 N1 ? ? C DC 11 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 9 N4 ? ? ? 1_555 C DG 2 O6 ? ? C DC 11 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 9 O2 ? ? ? 1_555 C DG 2 N2 ? ? C DC 11 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DT 10 N3 ? ? ? 1_555 C DA 1 N1 ? ? C DT 12 D DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DT 10 O4 ? ? ? 1_555 C DA 1 N6 ? ? C DT 12 D DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 228 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 225 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 229 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 226 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 3.37 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SF4 301 ? 5 'binding site for residue SF4 A 301' AC2 Software A CA 302 ? 6 'binding site for residue CA A 302' AC3 Software C CA 101 ? 5 'binding site for residue CA C 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ARG A 156 ? ARG A 153 . ? 1_555 ? 2 AC1 5 CYS A 201 ? CYS A 198 . ? 1_555 ? 3 AC1 5 CYS A 208 ? CYS A 205 . ? 1_555 ? 4 AC1 5 CYS A 211 ? CYS A 208 . ? 1_555 ? 5 AC1 5 CYS A 217 ? CYS A 214 . ? 1_555 ? 6 AC2 6 SER A 121 ? SER A 118 . ? 1_555 ? 7 AC2 6 VAL A 126 ? VAL A 123 . ? 1_555 ? 8 AC2 6 HOH G . ? HOH A 432 . ? 1_555 ? 9 AC2 6 HOH G . ? HOH A 477 . ? 1_555 ? 10 AC2 6 HOH G . ? HOH A 497 . ? 1_555 ? 11 AC2 6 DA C 9 ? DA D 21 . ? 1_555 ? 12 AC3 5 HOH G . ? HOH A 494 . ? 1_555 ? 13 AC3 5 HOH G . ? HOH A 515 . ? 1_555 ? 14 AC3 5 HOH H . ? HOH C 204 . ? 1_555 ? 15 AC3 5 HOH H . ? HOH C 209 . ? 1_555 ? 16 AC3 5 HOH H . ? HOH C 218 . ? 1_555 ? # _atom_sites.entry_id 5KN9 _atom_sites.fract_transf_matrix[1][1] 0.020049 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005622 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025800 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012519 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA FE N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 SER 2 -1 ? ? ? A . n A 1 3 HIS 3 0 ? ? ? A . n A 1 4 MET 4 1 ? ? ? A . n A 1 5 THR 5 2 ? ? ? A . n A 1 6 ARG 6 3 ? ? ? A . n A 1 7 GLU 7 4 ? ? ? A . n A 1 8 THR 8 5 ? ? ? A . n A 1 9 GLU 9 6 ? ? ? A . n A 1 10 ARG 10 7 ? ? ? A . n A 1 11 PHE 11 8 8 PHE PHE A . n A 1 12 PRO 12 9 9 PRO PRO A . n A 1 13 ALA 13 10 10 ALA ALA A . n A 1 14 ARG 14 11 11 ARG ARG A . n A 1 15 GLU 15 12 12 GLU GLU A . n A 1 16 PHE 16 13 13 PHE PHE A . n A 1 17 GLN 17 14 14 GLN GLN A . n A 1 18 ARG 18 15 15 ARG ARG A . n A 1 19 ASP 19 16 16 ASP ASP A . n A 1 20 LEU 20 17 17 LEU LEU A . n A 1 21 LEU 21 18 18 LEU LEU A . n A 1 22 ASP 22 19 19 ASP ASP A . n A 1 23 TRP 23 20 20 TRP TRP A . n A 1 24 PHE 24 21 21 PHE PHE A . n A 1 25 ALA 25 22 22 ALA ALA A . n A 1 26 ARG 26 23 23 ARG ARG A . n A 1 27 GLU 27 24 24 GLU GLU A . n A 1 28 ARG 28 25 25 ARG ARG A . n A 1 29 ARG 29 26 26 ARG ARG A . n A 1 30 ASP 30 27 27 ASP ASP A . n A 1 31 LEU 31 28 28 LEU LEU A . n A 1 32 PRO 32 29 29 PRO PRO A . n A 1 33 TRP 33 30 30 TRP TRP A . n A 1 34 ARG 34 31 31 ARG ARG A . n A 1 35 LYS 35 32 32 LYS LYS A . n A 1 36 ASP 36 33 33 ASP ASP A . n A 1 37 ARG 37 34 34 ARG ARG A . n A 1 38 ASP 38 35 35 ASP ASP A . n A 1 39 PRO 39 36 36 PRO PRO A . n A 1 40 TYR 40 37 37 TYR TYR A . n A 1 41 LYS 41 38 38 LYS LYS A . n A 1 42 VAL 42 39 39 VAL VAL A . n A 1 43 TRP 43 40 40 TRP TRP A . n A 1 44 VAL 44 41 41 VAL VAL A . n A 1 45 SER 45 42 42 SER SER A . n A 1 46 GLU 46 43 43 GLU GLU A . n A 1 47 VAL 47 44 44 VAL VAL A . n A 1 48 MET 48 45 45 MET MET A . n A 1 49 LEU 49 46 46 LEU LEU A . n A 1 50 GLN 50 47 47 GLN GLN A . n A 1 51 GLN 51 48 48 GLN GLN A . n A 1 52 THR 52 49 49 THR THR A . n A 1 53 ARG 53 50 50 ARG ARG A . n A 1 54 TYR 54 51 51 TYR TYR A . n A 1 55 GLU 55 52 52 GLU GLU A . n A 1 56 THR 56 53 53 THR THR A . n A 1 57 VAL 57 54 54 VAL VAL A . n A 1 58 ILE 58 55 55 ILE ILE A . n A 1 59 PRO 59 56 56 PRO PRO A . n A 1 60 TYR 60 57 57 TYR TYR A . n A 1 61 PHE 61 58 58 PHE PHE A . n A 1 62 GLU 62 59 59 GLU GLU A . n A 1 63 GLN 63 60 60 GLN GLN A . n A 1 64 PHE 64 61 61 PHE PHE A . n A 1 65 ILE 65 62 62 ILE ILE A . n A 1 66 ASP 66 63 63 ASP ASP A . n A 1 67 ARG 67 64 64 ARG ARG A . n A 1 68 PHE 68 65 65 PHE PHE A . n A 1 69 PRO 69 66 66 PRO PRO A . n A 1 70 THR 70 67 67 THR THR A . n A 1 71 LEU 71 68 68 LEU LEU A . n A 1 72 GLU 72 69 69 GLU GLU A . n A 1 73 ALA 73 70 70 ALA ALA A . n A 1 74 LEU 74 71 71 LEU LEU A . n A 1 75 ALA 75 72 72 ALA ALA A . n A 1 76 ASP 76 73 73 ASP ASP A . n A 1 77 ALA 77 74 74 ALA ALA A . n A 1 78 ASP 78 75 75 ASP ASP A . n A 1 79 GLU 79 76 76 GLU GLU A . n A 1 80 ASP 80 77 77 ASP ASP A . n A 1 81 GLU 81 78 78 GLU GLU A . n A 1 82 VAL 82 79 79 VAL VAL A . n A 1 83 LEU 83 80 80 LEU LEU A . n A 1 84 LYS 84 81 81 LYS LYS A . n A 1 85 ALA 85 82 82 ALA ALA A . n A 1 86 TRP 86 83 83 TRP TRP A . n A 1 87 GLU 87 84 84 GLU GLU A . n A 1 88 GLY 88 85 85 GLY GLY A . n A 1 89 LEU 89 86 86 LEU LEU A . n A 1 90 GLY 90 87 87 GLY GLY A . n A 1 91 TYR 91 88 88 TYR TYR A . n A 1 92 TYR 92 89 89 TYR TYR A . n A 1 93 SER 93 90 90 SER SER A . n A 1 94 ARG 94 91 91 ARG ARG A . n A 1 95 VAL 95 92 92 VAL VAL A . n A 1 96 ARG 96 93 93 ARG ARG A . n A 1 97 ASN 97 94 94 ASN ASN A . n A 1 98 LEU 98 95 95 LEU LEU A . n A 1 99 HIS 99 96 96 HIS HIS A . n A 1 100 ALA 100 97 97 ALA ALA A . n A 1 101 ALA 101 98 98 ALA ALA A . n A 1 102 VAL 102 99 99 VAL VAL A . n A 1 103 LYS 103 100 100 LYS LYS A . n A 1 104 GLU 104 101 101 GLU GLU A . n A 1 105 VAL 105 102 102 VAL VAL A . n A 1 106 LYS 106 103 103 LYS LYS A . n A 1 107 THR 107 104 104 THR THR A . n A 1 108 ARG 108 105 105 ARG ARG A . n A 1 109 TYR 109 106 106 TYR TYR A . n A 1 110 GLY 110 107 107 GLY GLY A . n A 1 111 GLY 111 108 108 GLY GLY A . n A 1 112 LYS 112 109 109 LYS LYS A . n A 1 113 VAL 113 110 110 VAL VAL A . n A 1 114 PRO 114 111 111 PRO PRO A . n A 1 115 ASP 115 112 112 ASP ASP A . n A 1 116 ASP 116 113 113 ASP ASP A . n A 1 117 PRO 117 114 114 PRO PRO A . n A 1 118 ASP 118 115 115 ASP ASP A . n A 1 119 GLU 119 116 116 GLU GLU A . n A 1 120 PHE 120 117 117 PHE PHE A . n A 1 121 SER 121 118 118 SER SER A . n A 1 122 ARG 122 119 119 ARG ARG A . n A 1 123 LEU 123 120 120 LEU LEU A . n A 1 124 LYS 124 121 121 LYS LYS A . n A 1 125 GLY 125 122 122 GLY GLY A . n A 1 126 VAL 126 123 123 VAL VAL A . n A 1 127 GLY 127 124 124 GLY GLY A . n A 1 128 PRO 128 125 125 PRO PRO A . n A 1 129 TYR 129 126 126 TYR TYR A . n A 1 130 THR 130 127 127 THR THR A . n A 1 131 VAL 131 128 128 VAL VAL A . n A 1 132 GLY 132 129 129 GLY GLY A . n A 1 133 ALA 133 130 130 ALA ALA A . n A 1 134 VAL 134 131 131 VAL VAL A . n A 1 135 LEU 135 132 132 LEU LEU A . n A 1 136 SER 136 133 133 SER SER A . n A 1 137 LEU 137 134 134 LEU LEU A . n A 1 138 ALA 138 135 135 ALA ALA A . n A 1 139 TYR 139 136 136 TYR TYR A . n A 1 140 GLY 140 137 137 GLY GLY A . n A 1 141 VAL 141 138 138 VAL VAL A . n A 1 142 PRO 142 139 139 PRO PRO A . n A 1 143 GLU 143 140 140 GLU GLU A . n A 1 144 PRO 144 141 141 PRO PRO A . n A 1 145 ALA 145 142 142 ALA ALA A . n A 1 146 VAL 146 143 143 VAL VAL A . n A 1 147 ASN 147 144 144 ASN ASN A . n A 1 148 GLY 148 145 145 GLY GLY A . n A 1 149 ASN 149 146 146 ASN ASN A . n A 1 150 VAL 150 147 147 VAL VAL A . n A 1 151 MET 151 148 148 MET MET A . n A 1 152 ARG 152 149 149 ARG ARG A . n A 1 153 VAL 153 150 150 VAL VAL A . n A 1 154 LEU 154 151 151 LEU LEU A . n A 1 155 SER 155 152 152 SER SER A . n A 1 156 ARG 156 153 153 ARG ARG A . n A 1 157 LEU 157 154 154 LEU LEU A . n A 1 158 PHE 158 155 155 PHE PHE A . n A 1 159 LEU 159 156 156 LEU LEU A . n A 1 160 VAL 160 157 157 VAL VAL A . n A 1 161 THR 161 158 158 THR THR A . n A 1 162 ASP 162 159 159 ASP ASP A . n A 1 163 ASP 163 160 160 ASP ASP A . n A 1 164 ILE 164 161 161 ILE ILE A . n A 1 165 ALA 165 162 162 ALA ALA A . n A 1 166 LYS 166 163 163 LYS LYS A . n A 1 167 CYS 167 164 164 CYS CYS A . n A 1 168 SER 168 165 165 SER SER A . n A 1 169 THR 169 166 166 THR THR A . n A 1 170 ARG 170 167 167 ARG ARG A . n A 1 171 LYS 171 168 168 LYS LYS A . n A 1 172 ARG 172 169 169 ARG ARG A . n A 1 173 PHE 173 170 170 PHE PHE A . n A 1 174 GLU 174 171 171 GLU GLU A . n A 1 175 GLN 175 172 172 GLN GLN A . n A 1 176 ILE 176 173 173 ILE ILE A . n A 1 177 VAL 177 174 174 VAL VAL A . n A 1 178 ARG 178 175 175 ARG ARG A . n A 1 179 GLU 179 176 176 GLU GLU A . n A 1 180 ILE 180 177 177 ILE ILE A . n A 1 181 MET 181 178 178 MET MET A . n A 1 182 ALA 182 179 179 ALA ALA A . n A 1 183 TYR 183 180 180 TYR TYR A . n A 1 184 GLU 184 181 181 GLU GLU A . n A 1 185 ASN 185 182 182 ASN ASN A . n A 1 186 PRO 186 183 183 PRO PRO A . n A 1 187 GLY 187 184 184 GLY GLY A . n A 1 188 ALA 188 185 185 ALA ALA A . n A 1 189 PHE 189 186 186 PHE PHE A . n A 1 190 ASN 190 187 187 ASN ASN A . n A 1 191 GLU 191 188 188 GLU GLU A . n A 1 192 ALA 192 189 189 ALA ALA A . n A 1 193 LEU 193 190 190 LEU LEU A . n A 1 194 ILE 194 191 191 ILE ILE A . n A 1 195 GLU 195 192 192 GLU GLU A . n A 1 196 LEU 196 193 193 LEU LEU A . n A 1 197 GLY 197 194 194 GLY GLY A . n A 1 198 ALA 198 195 195 ALA ALA A . n A 1 199 LEU 199 196 196 LEU LEU A . n A 1 200 VAL 200 197 197 VAL VAL A . n A 1 201 CYS 201 198 198 CYS CYS A . n A 1 202 THR 202 199 199 THR THR A . n A 1 203 PRO 203 200 200 PRO PRO A . n A 1 204 ARG 204 201 201 ARG ARG A . n A 1 205 ARG 205 202 202 ARG ARG A . n A 1 206 PRO 206 203 203 PRO PRO A . n A 1 207 SER 207 204 204 SER SER A . n A 1 208 CYS 208 205 205 CYS CYS A . n A 1 209 LEU 209 206 206 LEU LEU A . n A 1 210 LEU 210 207 207 LEU LEU A . n A 1 211 CYS 211 208 208 CYS CYS A . n A 1 212 PRO 212 209 209 PRO PRO A . n A 1 213 VAL 213 210 210 VAL VAL A . n A 1 214 GLN 214 211 211 GLN GLN A . n A 1 215 ALA 215 212 212 ALA ALA A . n A 1 216 TYR 216 213 213 TYR TYR A . n A 1 217 CYS 217 214 214 CYS CYS A . n A 1 218 GLN 218 215 215 GLN GLN A . n A 1 219 ALA 219 216 216 ALA ALA A . n A 1 220 PHE 220 217 217 PHE PHE A . n A 1 221 ALA 221 218 218 ALA ALA A . n A 1 222 GLU 222 219 219 GLU GLU A . n A 1 223 GLY 223 220 220 GLY GLY A . n A 1 224 VAL 224 221 221 VAL VAL A . n A 1 225 ALA 225 222 222 ALA ALA A . n A 1 226 GLU 226 223 223 GLU GLU A . n A 1 227 GLU 227 224 224 GLU GLU A . n A 1 228 LEU 228 225 225 LEU LEU A . n A 1 229 PRO 229 226 226 PRO PRO A . n A 1 230 VAL 230 227 227 VAL VAL A . n A 1 231 LYS 231 228 228 LYS LYS A . n A 1 232 MET 232 229 229 MET MET A . n B 2 1 DA 1 3 3 DA DA C . n B 2 2 DT 2 4 4 DT DT C . n B 2 3 DC 3 5 5 DC DC C . n B 2 4 DC 4 6 6 DC DC C . n B 2 5 8OG 5 7 7 8OG 8OG C . n B 2 6 DG 6 8 8 DG DG C . n B 2 7 DT 7 9 9 DT DT C . n B 2 8 DG 8 10 10 DG DG C . n B 2 9 DC 9 11 11 DC DC C . n B 2 10 DT 10 12 12 DT DT C . n C 3 1 DA 1 13 13 DA DA D . n C 3 2 DG 2 14 14 DG DG D . n C 3 3 DC 3 15 15 DC DC D . n C 3 4 DA 4 16 16 DA DA D . n C 3 5 DC 5 17 17 DC DC D . n C 3 6 DA 6 18 18 DA DA D . n C 3 7 DG 7 19 19 DG DG D . n C 3 8 DG 8 20 20 DG DG D . n C 3 9 DA 9 21 21 DA DA D . n C 3 10 DT 10 22 22 DT DT D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 SF4 1 301 400 SF4 SF4 A . E 5 CA 1 302 1 CA CA A . F 5 CA 1 101 2 CA CA C . G 6 HOH 1 401 103 HOH HOH A . G 6 HOH 2 402 143 HOH HOH A . G 6 HOH 3 403 111 HOH HOH A . G 6 HOH 4 404 175 HOH HOH A . G 6 HOH 5 405 180 HOH HOH A . G 6 HOH 6 406 152 HOH HOH A . G 6 HOH 7 407 172 HOH HOH A . G 6 HOH 8 408 93 HOH HOH A . G 6 HOH 9 409 141 HOH HOH A . G 6 HOH 10 410 95 HOH HOH A . G 6 HOH 11 411 118 HOH HOH A . G 6 HOH 12 412 79 HOH HOH A . G 6 HOH 13 413 15 HOH HOH A . G 6 HOH 14 414 57 HOH HOH A . G 6 HOH 15 415 142 HOH HOH A . G 6 HOH 16 416 89 HOH HOH A . G 6 HOH 17 417 104 HOH HOH A . G 6 HOH 18 418 139 HOH HOH A . G 6 HOH 19 419 98 HOH HOH A . G 6 HOH 20 420 102 HOH HOH A . G 6 HOH 21 421 49 HOH HOH A . G 6 HOH 22 422 9 HOH HOH A . G 6 HOH 23 423 177 HOH HOH A . G 6 HOH 24 424 100 HOH HOH A . G 6 HOH 25 425 97 HOH HOH A . G 6 HOH 26 426 53 HOH HOH A . G 6 HOH 27 427 61 HOH HOH A . G 6 HOH 28 428 109 HOH HOH A . G 6 HOH 29 429 114 HOH HOH A . G 6 HOH 30 430 147 HOH HOH A . G 6 HOH 31 431 136 HOH HOH A . G 6 HOH 32 432 38 HOH HOH A . G 6 HOH 33 433 10 HOH HOH A . G 6 HOH 34 434 78 HOH HOH A . G 6 HOH 35 435 154 HOH HOH A . G 6 HOH 36 436 171 HOH HOH A . G 6 HOH 37 437 3 HOH HOH A . G 6 HOH 38 438 140 HOH HOH A . G 6 HOH 39 439 5 HOH HOH A . G 6 HOH 40 440 7 HOH HOH A . G 6 HOH 41 441 121 HOH HOH A . G 6 HOH 42 442 157 HOH HOH A . G 6 HOH 43 443 35 HOH HOH A . G 6 HOH 44 444 85 HOH HOH A . G 6 HOH 45 445 96 HOH HOH A . G 6 HOH 46 446 13 HOH HOH A . G 6 HOH 47 447 68 HOH HOH A . G 6 HOH 48 448 117 HOH HOH A . G 6 HOH 49 449 8 HOH HOH A . G 6 HOH 50 450 29 HOH HOH A . G 6 HOH 51 451 179 HOH HOH A . G 6 HOH 52 452 134 HOH HOH A . G 6 HOH 53 453 119 HOH HOH A . G 6 HOH 54 454 176 HOH HOH A . G 6 HOH 55 455 155 HOH HOH A . G 6 HOH 56 456 88 HOH HOH A . G 6 HOH 57 457 18 HOH HOH A . G 6 HOH 58 458 80 HOH HOH A . G 6 HOH 59 459 145 HOH HOH A . G 6 HOH 60 460 91 HOH HOH A . G 6 HOH 61 461 120 HOH HOH A . G 6 HOH 62 462 62 HOH HOH A . G 6 HOH 63 463 6 HOH HOH A . G 6 HOH 64 464 21 HOH HOH A . G 6 HOH 65 465 4 HOH HOH A . G 6 HOH 66 466 51 HOH HOH A . G 6 HOH 67 467 23 HOH HOH A . G 6 HOH 68 468 56 HOH HOH A . G 6 HOH 69 469 58 HOH HOH A . G 6 HOH 70 470 160 HOH HOH A . G 6 HOH 71 471 69 HOH HOH A . G 6 HOH 72 472 12 HOH HOH A . G 6 HOH 73 473 77 HOH HOH A . G 6 HOH 74 474 34 HOH HOH A . G 6 HOH 75 475 169 HOH HOH A . G 6 HOH 76 476 170 HOH HOH A . G 6 HOH 77 477 146 HOH HOH A . G 6 HOH 78 478 92 HOH HOH A . G 6 HOH 79 479 133 HOH HOH A . G 6 HOH 80 480 52 HOH HOH A . G 6 HOH 81 481 113 HOH HOH A . G 6 HOH 82 482 33 HOH HOH A . G 6 HOH 83 483 135 HOH HOH A . G 6 HOH 84 484 90 HOH HOH A . G 6 HOH 85 485 22 HOH HOH A . G 6 HOH 86 486 50 HOH HOH A . G 6 HOH 87 487 129 HOH HOH A . G 6 HOH 88 488 94 HOH HOH A . G 6 HOH 89 489 101 HOH HOH A . G 6 HOH 90 490 24 HOH HOH A . G 6 HOH 91 491 36 HOH HOH A . G 6 HOH 92 492 131 HOH HOH A . G 6 HOH 93 493 11 HOH HOH A . G 6 HOH 94 494 71 HOH HOH A . G 6 HOH 95 495 41 HOH HOH A . G 6 HOH 96 496 43 HOH HOH A . G 6 HOH 97 497 37 HOH HOH A . G 6 HOH 98 498 112 HOH HOH A . G 6 HOH 99 499 116 HOH HOH A . G 6 HOH 100 500 148 HOH HOH A . G 6 HOH 101 501 168 HOH HOH A . G 6 HOH 102 502 153 HOH HOH A . G 6 HOH 103 503 122 HOH HOH A . G 6 HOH 104 504 156 HOH HOH A . G 6 HOH 105 505 2 HOH HOH A . G 6 HOH 106 506 31 HOH HOH A . G 6 HOH 107 507 99 HOH HOH A . G 6 HOH 108 508 123 HOH HOH A . G 6 HOH 109 509 137 HOH HOH A . G 6 HOH 110 510 54 HOH HOH A . G 6 HOH 111 511 115 HOH HOH A . G 6 HOH 112 512 87 HOH HOH A . G 6 HOH 113 513 124 HOH HOH A . G 6 HOH 114 514 48 HOH HOH A . G 6 HOH 115 515 74 HOH HOH A . G 6 HOH 116 516 55 HOH HOH A . G 6 HOH 117 517 75 HOH HOH A . G 6 HOH 118 518 144 HOH HOH A . G 6 HOH 119 519 46 HOH HOH A . G 6 HOH 120 520 130 HOH HOH A . G 6 HOH 121 521 138 HOH HOH A . H 6 HOH 1 201 107 HOH HOH C . H 6 HOH 2 202 127 HOH HOH C . H 6 HOH 3 203 39 HOH HOH C . H 6 HOH 4 204 47 HOH HOH C . H 6 HOH 5 205 70 HOH HOH C . H 6 HOH 6 206 40 HOH HOH C . H 6 HOH 7 207 164 HOH HOH C . H 6 HOH 8 208 44 HOH HOH C . H 6 HOH 9 209 73 HOH HOH C . H 6 HOH 10 210 174 HOH HOH C . H 6 HOH 11 211 150 HOH HOH C . H 6 HOH 12 212 151 HOH HOH C . H 6 HOH 13 213 166 HOH HOH C . H 6 HOH 14 214 45 HOH HOH C . H 6 HOH 15 215 105 HOH HOH C . H 6 HOH 16 216 165 HOH HOH C . H 6 HOH 17 217 125 HOH HOH C . H 6 HOH 18 218 72 HOH HOH C . H 6 HOH 19 219 161 HOH HOH C . H 6 HOH 20 220 76 HOH HOH C . H 6 HOH 21 221 132 HOH HOH C . I 6 HOH 1 101 28 HOH HOH D . I 6 HOH 2 102 14 HOH HOH D . I 6 HOH 3 103 59 HOH HOH D . I 6 HOH 4 104 65 HOH HOH D . I 6 HOH 5 105 63 HOH HOH D . I 6 HOH 6 106 25 HOH HOH D . I 6 HOH 7 107 173 HOH HOH D . I 6 HOH 8 108 158 HOH HOH D . I 6 HOH 9 109 16 HOH HOH D . I 6 HOH 10 110 66 HOH HOH D . I 6 HOH 11 111 60 HOH HOH D . I 6 HOH 12 112 17 HOH HOH D . I 6 HOH 13 113 163 HOH HOH D . I 6 HOH 14 114 178 HOH HOH D . I 6 HOH 15 115 32 HOH HOH D . I 6 HOH 16 116 108 HOH HOH D . I 6 HOH 17 117 20 HOH HOH D . I 6 HOH 18 118 19 HOH HOH D . I 6 HOH 19 119 126 HOH HOH D . I 6 HOH 20 120 106 HOH HOH D . I 6 HOH 21 121 128 HOH HOH D . I 6 HOH 22 122 162 HOH HOH D . I 6 HOH 23 123 159 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3670 ? 1 MORE -44 ? 1 'SSA (A^2)' 13200 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A SER 121 ? A SER 118 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 OG ? A SER 121 ? A SER 118 ? 1_555 67.9 ? 2 O ? A SER 121 ? A SER 118 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? A VAL 126 ? A VAL 123 ? 1_555 87.0 ? 3 OG ? A SER 121 ? A SER 118 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? A VAL 126 ? A VAL 123 ? 1_555 89.8 ? 4 O ? A SER 121 ? A SER 118 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? G HOH . ? A HOH 432 ? 1_555 76.1 ? 5 OG ? A SER 121 ? A SER 118 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? G HOH . ? A HOH 432 ? 1_555 143.7 ? 6 O ? A VAL 126 ? A VAL 123 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? G HOH . ? A HOH 432 ? 1_555 83.7 ? 7 O ? A SER 121 ? A SER 118 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? G HOH . ? A HOH 477 ? 1_555 137.0 ? 8 OG ? A SER 121 ? A SER 118 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? G HOH . ? A HOH 477 ? 1_555 69.1 ? 9 O ? A VAL 126 ? A VAL 123 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? G HOH . ? A HOH 477 ? 1_555 95.7 ? 10 O ? G HOH . ? A HOH 432 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? G HOH . ? A HOH 477 ? 1_555 146.9 ? 11 O ? A SER 121 ? A SER 118 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? G HOH . ? A HOH 497 ? 1_555 89.4 ? 12 OG ? A SER 121 ? A SER 118 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? G HOH . ? A HOH 497 ? 1_555 89.9 ? 13 O ? A VAL 126 ? A VAL 123 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? G HOH . ? A HOH 497 ? 1_555 176.2 ? 14 O ? G HOH . ? A HOH 432 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? G HOH . ? A HOH 497 ? 1_555 94.4 ? 15 O ? G HOH . ? A HOH 477 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? G HOH . ? A HOH 497 ? 1_555 87.7 ? 16 SG ? A CYS 201 ? A CYS 198 ? 1_555 FE2 ? D SF4 . ? A SF4 301 ? 1_555 S1 ? D SF4 . ? A SF4 301 ? 1_555 115.6 ? 17 SG ? A CYS 201 ? A CYS 198 ? 1_555 FE2 ? D SF4 . ? A SF4 301 ? 1_555 S3 ? D SF4 . ? A SF4 301 ? 1_555 125.5 ? 18 S1 ? D SF4 . ? A SF4 301 ? 1_555 FE2 ? D SF4 . ? A SF4 301 ? 1_555 S3 ? D SF4 . ? A SF4 301 ? 1_555 100.7 ? 19 SG ? A CYS 201 ? A CYS 198 ? 1_555 FE2 ? D SF4 . ? A SF4 301 ? 1_555 S4 ? D SF4 . ? A SF4 301 ? 1_555 113.5 ? 20 S1 ? D SF4 . ? A SF4 301 ? 1_555 FE2 ? D SF4 . ? A SF4 301 ? 1_555 S4 ? D SF4 . ? A SF4 301 ? 1_555 99.0 ? 21 S3 ? D SF4 . ? A SF4 301 ? 1_555 FE2 ? D SF4 . ? A SF4 301 ? 1_555 S4 ? D SF4 . ? A SF4 301 ? 1_555 98.3 ? 22 SG ? A CYS 208 ? A CYS 205 ? 1_555 FE1 ? D SF4 . ? A SF4 301 ? 1_555 S2 ? D SF4 . ? A SF4 301 ? 1_555 117.2 ? 23 SG ? A CYS 208 ? A CYS 205 ? 1_555 FE1 ? D SF4 . ? A SF4 301 ? 1_555 S3 ? D SF4 . ? A SF4 301 ? 1_555 115.9 ? 24 S2 ? D SF4 . ? A SF4 301 ? 1_555 FE1 ? D SF4 . ? A SF4 301 ? 1_555 S3 ? D SF4 . ? A SF4 301 ? 1_555 100.8 ? 25 SG ? A CYS 208 ? A CYS 205 ? 1_555 FE1 ? D SF4 . ? A SF4 301 ? 1_555 S4 ? D SF4 . ? A SF4 301 ? 1_555 122.9 ? 26 S2 ? D SF4 . ? A SF4 301 ? 1_555 FE1 ? D SF4 . ? A SF4 301 ? 1_555 S4 ? D SF4 . ? A SF4 301 ? 1_555 98.0 ? 27 S3 ? D SF4 . ? A SF4 301 ? 1_555 FE1 ? D SF4 . ? A SF4 301 ? 1_555 S4 ? D SF4 . ? A SF4 301 ? 1_555 98.0 ? 28 SG ? A CYS 211 ? A CYS 208 ? 1_555 FE3 ? D SF4 . ? A SF4 301 ? 1_555 S1 ? D SF4 . ? A SF4 301 ? 1_555 120.4 ? 29 SG ? A CYS 211 ? A CYS 208 ? 1_555 FE3 ? D SF4 . ? A SF4 301 ? 1_555 S2 ? D SF4 . ? A SF4 301 ? 1_555 118.6 ? 30 S1 ? D SF4 . ? A SF4 301 ? 1_555 FE3 ? D SF4 . ? A SF4 301 ? 1_555 S2 ? D SF4 . ? A SF4 301 ? 1_555 100.8 ? 31 SG ? A CYS 211 ? A CYS 208 ? 1_555 FE3 ? D SF4 . ? A SF4 301 ? 1_555 S4 ? D SF4 . ? A SF4 301 ? 1_555 114.8 ? 32 S1 ? D SF4 . ? A SF4 301 ? 1_555 FE3 ? D SF4 . ? A SF4 301 ? 1_555 S4 ? D SF4 . ? A SF4 301 ? 1_555 99.7 ? 33 S2 ? D SF4 . ? A SF4 301 ? 1_555 FE3 ? D SF4 . ? A SF4 301 ? 1_555 S4 ? D SF4 . ? A SF4 301 ? 1_555 98.6 ? 34 SG ? A CYS 217 ? A CYS 214 ? 1_555 FE4 ? D SF4 . ? A SF4 301 ? 1_555 S1 ? D SF4 . ? A SF4 301 ? 1_555 124.3 ? 35 SG ? A CYS 217 ? A CYS 214 ? 1_555 FE4 ? D SF4 . ? A SF4 301 ? 1_555 S2 ? D SF4 . ? A SF4 301 ? 1_555 119.0 ? 36 S1 ? D SF4 . ? A SF4 301 ? 1_555 FE4 ? D SF4 . ? A SF4 301 ? 1_555 S2 ? D SF4 . ? A SF4 301 ? 1_555 99.7 ? 37 SG ? A CYS 217 ? A CYS 214 ? 1_555 FE4 ? D SF4 . ? A SF4 301 ? 1_555 S3 ? D SF4 . ? A SF4 301 ? 1_555 110.0 ? 38 S1 ? D SF4 . ? A SF4 301 ? 1_555 FE4 ? D SF4 . ? A SF4 301 ? 1_555 S3 ? D SF4 . ? A SF4 301 ? 1_555 100.1 ? 39 S2 ? D SF4 . ? A SF4 301 ? 1_555 FE4 ? D SF4 . ? A SF4 301 ? 1_555 S3 ? D SF4 . ? A SF4 301 ? 1_555 99.9 ? 40 O ? G HOH . ? A HOH 494 ? 1_555 CA ? F CA . ? C CA 101 ? 1_555 O ? G HOH . ? A HOH 515 ? 1_555 83.4 ? 41 O ? G HOH . ? A HOH 494 ? 1_555 CA ? F CA . ? C CA 101 ? 1_555 O ? H HOH . ? C HOH 204 ? 1_555 75.5 ? 42 O ? G HOH . ? A HOH 515 ? 1_555 CA ? F CA . ? C CA 101 ? 1_555 O ? H HOH . ? C HOH 204 ? 1_555 151.6 ? 43 O ? G HOH . ? A HOH 494 ? 1_555 CA ? F CA . ? C CA 101 ? 1_555 O ? H HOH . ? C HOH 209 ? 1_555 75.8 ? 44 O ? G HOH . ? A HOH 515 ? 1_555 CA ? F CA . ? C CA 101 ? 1_555 O ? H HOH . ? C HOH 209 ? 1_555 92.3 ? 45 O ? H HOH . ? C HOH 204 ? 1_555 CA ? F CA . ? C CA 101 ? 1_555 O ? H HOH . ? C HOH 209 ? 1_555 100.6 ? 46 O ? G HOH . ? A HOH 494 ? 1_555 CA ? F CA . ? C CA 101 ? 1_555 O ? H HOH . ? C HOH 218 ? 1_555 152.4 ? 47 O ? G HOH . ? A HOH 515 ? 1_555 CA ? F CA . ? C CA 101 ? 1_555 O ? H HOH . ? C HOH 218 ? 1_555 72.1 ? 48 O ? H HOH . ? C HOH 204 ? 1_555 CA ? F CA . ? C CA 101 ? 1_555 O ? H HOH . ? C HOH 218 ? 1_555 131.7 ? 49 O ? H HOH . ? C HOH 209 ? 1_555 CA ? F CA . ? C CA 101 ? 1_555 O ? H HOH . ? C HOH 218 ? 1_555 92.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-02-08 2 'Structure model' 1 1 2017-02-22 3 'Structure model' 1 2 2017-04-05 4 'Structure model' 1 3 2017-09-27 5 'Structure model' 1 4 2019-12-04 6 'Structure model' 1 5 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 5 'Structure model' 'Author supporting evidence' 5 6 'Structure model' 'Data collection' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Derived calculations' 8 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_audit_support 2 5 'Structure model' pdbx_audit_support 3 6 'Structure model' chem_comp_atom 4 6 'Structure model' chem_comp_bond 5 6 'Structure model' database_2 6 6 'Structure model' pdbx_initial_refinement_model 7 6 'Structure model' pdbx_struct_conn_angle 8 6 'Structure model' struct_conn 9 6 'Structure model' struct_conn_type # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_audit_support.funding_organization' 2 5 'Structure model' '_pdbx_audit_support.funding_organization' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' 5 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 6 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 9 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 10 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 11 6 'Structure model' '_pdbx_struct_conn_angle.value' 12 6 'Structure model' '_struct_conn.conn_type_id' 13 6 'Structure model' '_struct_conn.id' 14 6 'Structure model' '_struct_conn.pdbx_dist_value' 15 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 16 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 17 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 24 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 25 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 28 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 30 6 'Structure model' '_struct_conn_type.id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -15.3842 8.0023 -11.0229 0.1596 0.2186 0.2870 0.0309 0.0147 -0.0143 6.9547 3.2406 9.5543 3.4591 -2.6086 -4.7914 0.1697 0.0957 0.3972 0.3257 0.1100 0.8998 -0.4160 -0.7928 -0.2441 'X-RAY DIFFRACTION' 2 ? refined -0.9083 7.0390 -31.3780 0.3672 0.2342 0.1964 -0.1331 -0.0200 0.0197 1.1761 2.5213 6.3080 -0.2226 -0.0918 -0.3291 -0.2217 0.1854 0.1810 -0.6847 0.2116 -0.1834 -0.5206 0.2610 0.0169 'X-RAY DIFFRACTION' 3 ? refined 4.4723 0.3772 -42.2879 0.8046 0.5849 0.1693 -0.3380 0.1730 0.0078 1.4647 1.5432 2.6819 -0.8040 1.1041 -1.7005 -0.0822 0.4599 0.1165 -0.9675 -0.0228 -0.3944 0.1548 0.4858 0.2586 'X-RAY DIFFRACTION' 4 ? refined 0.0147 -7.1176 -39.7554 0.5729 0.3464 0.1671 -0.1578 0.0379 -0.0138 7.6997 3.0446 9.2337 -0.1755 6.7001 2.0520 0.1020 0.5179 -0.1637 -0.6405 0.0216 -0.2441 0.2134 0.3445 -0.2189 'X-RAY DIFFRACTION' 5 ? refined -10.4743 -9.8620 -35.1166 0.4991 0.2687 0.3026 -0.1771 -0.0591 -0.0235 5.3060 0.8587 6.1375 -1.9859 1.4372 -0.3687 -0.1967 0.3232 -0.7019 -0.2734 -0.0109 0.3087 0.3068 -0.2895 0.1580 'X-RAY DIFFRACTION' 6 ? refined -8.1227 -2.9198 -19.6700 0.1780 0.1740 0.1805 -0.0799 -0.0539 0.0384 0.8119 1.9511 4.5096 0.4022 1.3247 1.4273 -0.0651 -0.0477 0.0208 -0.2933 0.0566 0.1922 0.0295 -0.4252 0.0012 'X-RAY DIFFRACTION' 7 ? refined -7.7763 -9.9924 -12.3505 0.2285 0.2105 0.1621 -0.1027 -0.0082 0.0282 4.3657 4.1814 1.0547 -2.4641 0.4290 0.4897 0.0643 -0.0036 -0.3823 0.0153 0.0087 0.4512 0.4152 -0.3129 -0.0777 'X-RAY DIFFRACTION' 8 ? refined -11.3518 3.9972 -18.1496 0.1855 0.1642 0.2206 -0.0631 -0.0431 0.0536 6.1522 4.4419 3.9162 3.7378 2.9997 2.4197 -0.1323 0.0935 0.4752 -0.1033 0.0771 0.5493 -0.1048 -0.2246 0.0527 'X-RAY DIFFRACTION' 9 ? refined -0.4844 8.0714 -6.6452 0.2298 0.1282 0.1783 -0.0740 -0.0469 0.0262 4.1337 7.1176 6.5525 -0.5724 -2.0908 1.2100 -0.1525 -0.0816 0.6273 -0.1407 0.0878 -0.4756 -0.5611 0.4233 0.0726 'X-RAY DIFFRACTION' 10 ? refined -1.8299 -1.0667 -2.3419 0.2382 0.1159 0.1362 -0.0446 -0.0317 0.0218 5.7579 8.0603 4.6240 -4.5419 -1.1840 1.3833 -0.3183 -0.3501 -0.1017 0.7494 0.2535 -0.1612 0.4154 0.1091 0.0313 'X-RAY DIFFRACTION' 11 ? refined 11.8715 -9.5652 -21.9416 0.2171 0.3230 0.4315 -0.0384 0.0722 -0.0755 4.7099 4.0790 3.1553 3.5093 0.3418 -1.4018 -0.1972 0.1328 -0.1663 -0.4370 0.0548 -0.7760 0.2273 0.6523 0.0537 'X-RAY DIFFRACTION' 12 ? refined 10.1363 -9.5780 -20.5985 0.2590 0.3177 0.5091 -0.1004 0.0164 0.0259 5.0819 0.1855 1.0947 -0.7102 0.0962 -0.2603 0.1415 -0.5411 -0.2855 -0.4974 -0.0682 -0.9948 0.0032 0.1570 -0.1028 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 8 through 24 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 25 through 64 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 65 through 88 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 89 through 105 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 106 through 124 ) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 125 through 155 ) ; 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 156 through 179 ) ; 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 180 through 196 ) ; 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 197 through 210 ) ; 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 211 through 229 ) ; 'X-RAY DIFFRACTION' 11 11 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 3 through 12 ) ; 'X-RAY DIFFRACTION' 12 12 ? ? ? ? ? ? ? ? ? ;chain 'D' and (resid 13 through 22 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 431 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 509 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 "O3'" D DT 22 ? ? 1_555 O A HOH 507 ? ? 1_545 2.02 2 1 O A HOH 507 ? ? 1_555 O D HOH 119 ? ? 1_565 2.04 3 1 O A HOH 404 ? ? 1_555 O A HOH 439 ? ? 1_545 2.16 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 C _pdbx_validate_rmsd_angle.auth_comp_id_1 DT _pdbx_validate_rmsd_angle.auth_seq_id_1 4 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 C _pdbx_validate_rmsd_angle.auth_comp_id_2 DT _pdbx_validate_rmsd_angle.auth_seq_id_2 4 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N1 _pdbx_validate_rmsd_angle.auth_asym_id_3 C _pdbx_validate_rmsd_angle.auth_comp_id_3 DT _pdbx_validate_rmsd_angle.auth_seq_id_3 4 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 111.50 _pdbx_validate_rmsd_angle.angle_target_value 108.30 _pdbx_validate_rmsd_angle.angle_deviation 3.20 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 182 ? ? -161.67 75.34 2 1 VAL A 197 ? ? -123.93 -52.87 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 520 ? 6.80 . 2 1 O ? A HOH 521 ? 7.97 . 3 1 O ? C HOH 219 ? 6.36 . 4 1 O ? C HOH 220 ? 6.37 . 5 1 O ? C HOH 221 ? 7.30 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A SER -1 ? A SER 2 3 1 Y 1 A HIS 0 ? A HIS 3 4 1 Y 1 A MET 1 ? A MET 4 5 1 Y 1 A THR 2 ? A THR 5 6 1 Y 1 A ARG 3 ? A ARG 6 7 1 Y 1 A GLU 4 ? A GLU 7 8 1 Y 1 A THR 5 ? A THR 8 9 1 Y 1 A GLU 6 ? A GLU 9 10 1 Y 1 A ARG 7 ? A ARG 10 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8OG OP3 O N N 1 8OG P P N N 2 8OG OP1 O N N 3 8OG OP2 O N N 4 8OG "O5'" O N N 5 8OG "C5'" C N N 6 8OG "C4'" C N R 7 8OG "O4'" O N N 8 8OG "C3'" C N S 9 8OG "O3'" O N N 10 8OG "C2'" C N N 11 8OG "C1'" C N R 12 8OG N9 N N N 13 8OG C8 C N N 14 8OG N7 N N N 15 8OG C5 C N N 16 8OG C6 C N N 17 8OG O6 O N N 18 8OG N1 N N N 19 8OG C2 C N N 20 8OG N2 N N N 21 8OG N3 N N N 22 8OG C4 C N N 23 8OG O8 O N N 24 8OG HOP3 H N N 25 8OG HOP2 H N N 26 8OG "H5'" H N N 27 8OG "H5''" H N N 28 8OG "H4'" H N N 29 8OG "H3'" H N N 30 8OG "HO3'" H N N 31 8OG "H2'" H N N 32 8OG "H2''" H N N 33 8OG "H1'" H N N 34 8OG H7 H N N 35 8OG H1 H N N 36 8OG H21 H N N 37 8OG H22 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 CA CA CA N N 112 CYS N N N N 113 CYS CA C N R 114 CYS C C N N 115 CYS O O N N 116 CYS CB C N N 117 CYS SG S N N 118 CYS OXT O N N 119 CYS H H N N 120 CYS H2 H N N 121 CYS HA H N N 122 CYS HB2 H N N 123 CYS HB3 H N N 124 CYS HG H N N 125 CYS HXT H N N 126 DA OP3 O N N 127 DA P P N N 128 DA OP1 O N N 129 DA OP2 O N N 130 DA "O5'" O N N 131 DA "C5'" C N N 132 DA "C4'" C N R 133 DA "O4'" O N N 134 DA "C3'" C N S 135 DA "O3'" O N N 136 DA "C2'" C N N 137 DA "C1'" C N R 138 DA N9 N Y N 139 DA C8 C Y N 140 DA N7 N Y N 141 DA C5 C Y N 142 DA C6 C Y N 143 DA N6 N N N 144 DA N1 N Y N 145 DA C2 C Y N 146 DA N3 N Y N 147 DA C4 C Y N 148 DA HOP3 H N N 149 DA HOP2 H N N 150 DA "H5'" H N N 151 DA "H5''" H N N 152 DA "H4'" H N N 153 DA "H3'" H N N 154 DA "HO3'" H N N 155 DA "H2'" H N N 156 DA "H2''" H N N 157 DA "H1'" H N N 158 DA H8 H N N 159 DA H61 H N N 160 DA H62 H N N 161 DA H2 H N N 162 DC OP3 O N N 163 DC P P N N 164 DC OP1 O N N 165 DC OP2 O N N 166 DC "O5'" O N N 167 DC "C5'" C N N 168 DC "C4'" C N R 169 DC "O4'" O N N 170 DC "C3'" C N S 171 DC "O3'" O N N 172 DC "C2'" C N N 173 DC "C1'" C N R 174 DC N1 N N N 175 DC C2 C N N 176 DC O2 O N N 177 DC N3 N N N 178 DC C4 C N N 179 DC N4 N N N 180 DC C5 C N N 181 DC C6 C N N 182 DC HOP3 H N N 183 DC HOP2 H N N 184 DC "H5'" H N N 185 DC "H5''" H N N 186 DC "H4'" H N N 187 DC "H3'" H N N 188 DC "HO3'" H N N 189 DC "H2'" H N N 190 DC "H2''" H N N 191 DC "H1'" H N N 192 DC H41 H N N 193 DC H42 H N N 194 DC H5 H N N 195 DC H6 H N N 196 DG OP3 O N N 197 DG P P N N 198 DG OP1 O N N 199 DG OP2 O N N 200 DG "O5'" O N N 201 DG "C5'" C N N 202 DG "C4'" C N R 203 DG "O4'" O N N 204 DG "C3'" C N S 205 DG "O3'" O N N 206 DG "C2'" C N N 207 DG "C1'" C N R 208 DG N9 N Y N 209 DG C8 C Y N 210 DG N7 N Y N 211 DG C5 C Y N 212 DG C6 C N N 213 DG O6 O N N 214 DG N1 N N N 215 DG C2 C N N 216 DG N2 N N N 217 DG N3 N N N 218 DG C4 C Y N 219 DG HOP3 H N N 220 DG HOP2 H N N 221 DG "H5'" H N N 222 DG "H5''" H N N 223 DG "H4'" H N N 224 DG "H3'" H N N 225 DG "HO3'" H N N 226 DG "H2'" H N N 227 DG "H2''" H N N 228 DG "H1'" H N N 229 DG H8 H N N 230 DG H1 H N N 231 DG H21 H N N 232 DG H22 H N N 233 DT OP3 O N N 234 DT P P N N 235 DT OP1 O N N 236 DT OP2 O N N 237 DT "O5'" O N N 238 DT "C5'" C N N 239 DT "C4'" C N R 240 DT "O4'" O N N 241 DT "C3'" C N S 242 DT "O3'" O N N 243 DT "C2'" C N N 244 DT "C1'" C N R 245 DT N1 N N N 246 DT C2 C N N 247 DT O2 O N N 248 DT N3 N N N 249 DT C4 C N N 250 DT O4 O N N 251 DT C5 C N N 252 DT C7 C N N 253 DT C6 C N N 254 DT HOP3 H N N 255 DT HOP2 H N N 256 DT "H5'" H N N 257 DT "H5''" H N N 258 DT "H4'" H N N 259 DT "H3'" H N N 260 DT "HO3'" H N N 261 DT "H2'" H N N 262 DT "H2''" H N N 263 DT "H1'" H N N 264 DT H3 H N N 265 DT H71 H N N 266 DT H72 H N N 267 DT H73 H N N 268 DT H6 H N N 269 GLN N N N N 270 GLN CA C N S 271 GLN C C N N 272 GLN O O N N 273 GLN CB C N N 274 GLN CG C N N 275 GLN CD C N N 276 GLN OE1 O N N 277 GLN NE2 N N N 278 GLN OXT O N N 279 GLN H H N N 280 GLN H2 H N N 281 GLN HA H N N 282 GLN HB2 H N N 283 GLN HB3 H N N 284 GLN HG2 H N N 285 GLN HG3 H N N 286 GLN HE21 H N N 287 GLN HE22 H N N 288 GLN HXT H N N 289 GLU N N N N 290 GLU CA C N S 291 GLU C C N N 292 GLU O O N N 293 GLU CB C N N 294 GLU CG C N N 295 GLU CD C N N 296 GLU OE1 O N N 297 GLU OE2 O N N 298 GLU OXT O N N 299 GLU H H N N 300 GLU H2 H N N 301 GLU HA H N N 302 GLU HB2 H N N 303 GLU HB3 H N N 304 GLU HG2 H N N 305 GLU HG3 H N N 306 GLU HE2 H N N 307 GLU HXT H N N 308 GLY N N N N 309 GLY CA C N N 310 GLY C C N N 311 GLY O O N N 312 GLY OXT O N N 313 GLY H H N N 314 GLY H2 H N N 315 GLY HA2 H N N 316 GLY HA3 H N N 317 GLY HXT H N N 318 HIS N N N N 319 HIS CA C N S 320 HIS C C N N 321 HIS O O N N 322 HIS CB C N N 323 HIS CG C Y N 324 HIS ND1 N Y N 325 HIS CD2 C Y N 326 HIS CE1 C Y N 327 HIS NE2 N Y N 328 HIS OXT O N N 329 HIS H H N N 330 HIS H2 H N N 331 HIS HA H N N 332 HIS HB2 H N N 333 HIS HB3 H N N 334 HIS HD1 H N N 335 HIS HD2 H N N 336 HIS HE1 H N N 337 HIS HE2 H N N 338 HIS HXT H N N 339 HOH O O N N 340 HOH H1 H N N 341 HOH H2 H N N 342 ILE N N N N 343 ILE CA C N S 344 ILE C C N N 345 ILE O O N N 346 ILE CB C N S 347 ILE CG1 C N N 348 ILE CG2 C N N 349 ILE CD1 C N N 350 ILE OXT O N N 351 ILE H H N N 352 ILE H2 H N N 353 ILE HA H N N 354 ILE HB H N N 355 ILE HG12 H N N 356 ILE HG13 H N N 357 ILE HG21 H N N 358 ILE HG22 H N N 359 ILE HG23 H N N 360 ILE HD11 H N N 361 ILE HD12 H N N 362 ILE HD13 H N N 363 ILE HXT H N N 364 LEU N N N N 365 LEU CA C N S 366 LEU C C N N 367 LEU O O N N 368 LEU CB C N N 369 LEU CG C N N 370 LEU CD1 C N N 371 LEU CD2 C N N 372 LEU OXT O N N 373 LEU H H N N 374 LEU H2 H N N 375 LEU HA H N N 376 LEU HB2 H N N 377 LEU HB3 H N N 378 LEU HG H N N 379 LEU HD11 H N N 380 LEU HD12 H N N 381 LEU HD13 H N N 382 LEU HD21 H N N 383 LEU HD22 H N N 384 LEU HD23 H N N 385 LEU HXT H N N 386 LYS N N N N 387 LYS CA C N S 388 LYS C C N N 389 LYS O O N N 390 LYS CB C N N 391 LYS CG C N N 392 LYS CD C N N 393 LYS CE C N N 394 LYS NZ N N N 395 LYS OXT O N N 396 LYS H H N N 397 LYS H2 H N N 398 LYS HA H N N 399 LYS HB2 H N N 400 LYS HB3 H N N 401 LYS HG2 H N N 402 LYS HG3 H N N 403 LYS HD2 H N N 404 LYS HD3 H N N 405 LYS HE2 H N N 406 LYS HE3 H N N 407 LYS HZ1 H N N 408 LYS HZ2 H N N 409 LYS HZ3 H N N 410 LYS HXT H N N 411 MET N N N N 412 MET CA C N S 413 MET C C N N 414 MET O O N N 415 MET CB C N N 416 MET CG C N N 417 MET SD S N N 418 MET CE C N N 419 MET OXT O N N 420 MET H H N N 421 MET H2 H N N 422 MET HA H N N 423 MET HB2 H N N 424 MET HB3 H N N 425 MET HG2 H N N 426 MET HG3 H N N 427 MET HE1 H N N 428 MET HE2 H N N 429 MET HE3 H N N 430 MET HXT H N N 431 PHE N N N N 432 PHE CA C N S 433 PHE C C N N 434 PHE O O N N 435 PHE CB C N N 436 PHE CG C Y N 437 PHE CD1 C Y N 438 PHE CD2 C Y N 439 PHE CE1 C Y N 440 PHE CE2 C Y N 441 PHE CZ C Y N 442 PHE OXT O N N 443 PHE H H N N 444 PHE H2 H N N 445 PHE HA H N N 446 PHE HB2 H N N 447 PHE HB3 H N N 448 PHE HD1 H N N 449 PHE HD2 H N N 450 PHE HE1 H N N 451 PHE HE2 H N N 452 PHE HZ H N N 453 PHE HXT H N N 454 PRO N N N N 455 PRO CA C N S 456 PRO C C N N 457 PRO O O N N 458 PRO CB C N N 459 PRO CG C N N 460 PRO CD C N N 461 PRO OXT O N N 462 PRO H H N N 463 PRO HA H N N 464 PRO HB2 H N N 465 PRO HB3 H N N 466 PRO HG2 H N N 467 PRO HG3 H N N 468 PRO HD2 H N N 469 PRO HD3 H N N 470 PRO HXT H N N 471 SER N N N N 472 SER CA C N S 473 SER C C N N 474 SER O O N N 475 SER CB C N N 476 SER OG O N N 477 SER OXT O N N 478 SER H H N N 479 SER H2 H N N 480 SER HA H N N 481 SER HB2 H N N 482 SER HB3 H N N 483 SER HG H N N 484 SER HXT H N N 485 SF4 FE1 FE N N 486 SF4 FE2 FE N N 487 SF4 FE3 FE N N 488 SF4 FE4 FE N N 489 SF4 S1 S N N 490 SF4 S2 S N N 491 SF4 S3 S N N 492 SF4 S4 S N N 493 THR N N N N 494 THR CA C N S 495 THR C C N N 496 THR O O N N 497 THR CB C N R 498 THR OG1 O N N 499 THR CG2 C N N 500 THR OXT O N N 501 THR H H N N 502 THR H2 H N N 503 THR HA H N N 504 THR HB H N N 505 THR HG1 H N N 506 THR HG21 H N N 507 THR HG22 H N N 508 THR HG23 H N N 509 THR HXT H N N 510 TRP N N N N 511 TRP CA C N S 512 TRP C C N N 513 TRP O O N N 514 TRP CB C N N 515 TRP CG C Y N 516 TRP CD1 C Y N 517 TRP CD2 C Y N 518 TRP NE1 N Y N 519 TRP CE2 C Y N 520 TRP CE3 C Y N 521 TRP CZ2 C Y N 522 TRP CZ3 C Y N 523 TRP CH2 C Y N 524 TRP OXT O N N 525 TRP H H N N 526 TRP H2 H N N 527 TRP HA H N N 528 TRP HB2 H N N 529 TRP HB3 H N N 530 TRP HD1 H N N 531 TRP HE1 H N N 532 TRP HE3 H N N 533 TRP HZ2 H N N 534 TRP HZ3 H N N 535 TRP HH2 H N N 536 TRP HXT H N N 537 TYR N N N N 538 TYR CA C N S 539 TYR C C N N 540 TYR O O N N 541 TYR CB C N N 542 TYR CG C Y N 543 TYR CD1 C Y N 544 TYR CD2 C Y N 545 TYR CE1 C Y N 546 TYR CE2 C Y N 547 TYR CZ C Y N 548 TYR OH O N N 549 TYR OXT O N N 550 TYR H H N N 551 TYR H2 H N N 552 TYR HA H N N 553 TYR HB2 H N N 554 TYR HB3 H N N 555 TYR HD1 H N N 556 TYR HD2 H N N 557 TYR HE1 H N N 558 TYR HE2 H N N 559 TYR HH H N N 560 TYR HXT H N N 561 VAL N N N N 562 VAL CA C N S 563 VAL C C N N 564 VAL O O N N 565 VAL CB C N N 566 VAL CG1 C N N 567 VAL CG2 C N N 568 VAL OXT O N N 569 VAL H H N N 570 VAL H2 H N N 571 VAL HA H N N 572 VAL HB H N N 573 VAL HG11 H N N 574 VAL HG12 H N N 575 VAL HG13 H N N 576 VAL HG21 H N N 577 VAL HG22 H N N 578 VAL HG23 H N N 579 VAL HXT H N N 580 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8OG OP3 P sing N N 1 8OG OP3 HOP3 sing N N 2 8OG P OP1 doub N N 3 8OG P OP2 sing N N 4 8OG P "O5'" sing N N 5 8OG OP2 HOP2 sing N N 6 8OG "O5'" "C5'" sing N N 7 8OG "C5'" "C4'" sing N N 8 8OG "C5'" "H5'" sing N N 9 8OG "C5'" "H5''" sing N N 10 8OG "C4'" "O4'" sing N N 11 8OG "C4'" "C3'" sing N N 12 8OG "C4'" "H4'" sing N N 13 8OG "O4'" "C1'" sing N N 14 8OG "C3'" "O3'" sing N N 15 8OG "C3'" "C2'" sing N N 16 8OG "C3'" "H3'" sing N N 17 8OG "O3'" "HO3'" sing N N 18 8OG "C2'" "C1'" sing N N 19 8OG "C2'" "H2'" sing N N 20 8OG "C2'" "H2''" sing N N 21 8OG "C1'" N9 sing N N 22 8OG "C1'" "H1'" sing N N 23 8OG N9 C8 sing N N 24 8OG N9 C4 sing N N 25 8OG C8 N7 sing N N 26 8OG C8 O8 doub N N 27 8OG N7 C5 sing N N 28 8OG N7 H7 sing N N 29 8OG C5 C6 sing N N 30 8OG C5 C4 doub N N 31 8OG C6 O6 doub N N 32 8OG C6 N1 sing N N 33 8OG N1 C2 sing N N 34 8OG N1 H1 sing N N 35 8OG C2 N2 sing N N 36 8OG C2 N3 doub N N 37 8OG N2 H21 sing N N 38 8OG N2 H22 sing N N 39 8OG N3 C4 sing N N 40 ALA N CA sing N N 41 ALA N H sing N N 42 ALA N H2 sing N N 43 ALA CA C sing N N 44 ALA CA CB sing N N 45 ALA CA HA sing N N 46 ALA C O doub N N 47 ALA C OXT sing N N 48 ALA CB HB1 sing N N 49 ALA CB HB2 sing N N 50 ALA CB HB3 sing N N 51 ALA OXT HXT sing N N 52 ARG N CA sing N N 53 ARG N H sing N N 54 ARG N H2 sing N N 55 ARG CA C sing N N 56 ARG CA CB sing N N 57 ARG CA HA sing N N 58 ARG C O doub N N 59 ARG C OXT sing N N 60 ARG CB CG sing N N 61 ARG CB HB2 sing N N 62 ARG CB HB3 sing N N 63 ARG CG CD sing N N 64 ARG CG HG2 sing N N 65 ARG CG HG3 sing N N 66 ARG CD NE sing N N 67 ARG CD HD2 sing N N 68 ARG CD HD3 sing N N 69 ARG NE CZ sing N N 70 ARG NE HE sing N N 71 ARG CZ NH1 sing N N 72 ARG CZ NH2 doub N N 73 ARG NH1 HH11 sing N N 74 ARG NH1 HH12 sing N N 75 ARG NH2 HH21 sing N N 76 ARG NH2 HH22 sing N N 77 ARG OXT HXT sing N N 78 ASN N CA sing N N 79 ASN N H sing N N 80 ASN N H2 sing N N 81 ASN CA C sing N N 82 ASN CA CB sing N N 83 ASN CA HA sing N N 84 ASN C O doub N N 85 ASN C OXT sing N N 86 ASN CB CG sing N N 87 ASN CB HB2 sing N N 88 ASN CB HB3 sing N N 89 ASN CG OD1 doub N N 90 ASN CG ND2 sing N N 91 ASN ND2 HD21 sing N N 92 ASN ND2 HD22 sing N N 93 ASN OXT HXT sing N N 94 ASP N CA sing N N 95 ASP N H sing N N 96 ASP N H2 sing N N 97 ASP CA C sing N N 98 ASP CA CB sing N N 99 ASP CA HA sing N N 100 ASP C O doub N N 101 ASP C OXT sing N N 102 ASP CB CG sing N N 103 ASP CB HB2 sing N N 104 ASP CB HB3 sing N N 105 ASP CG OD1 doub N N 106 ASP CG OD2 sing N N 107 ASP OD2 HD2 sing N N 108 ASP OXT HXT sing N N 109 CYS N CA sing N N 110 CYS N H sing N N 111 CYS N H2 sing N N 112 CYS CA C sing N N 113 CYS CA CB sing N N 114 CYS CA HA sing N N 115 CYS C O doub N N 116 CYS C OXT sing N N 117 CYS CB SG sing N N 118 CYS CB HB2 sing N N 119 CYS CB HB3 sing N N 120 CYS SG HG sing N N 121 CYS OXT HXT sing N N 122 DA OP3 P sing N N 123 DA OP3 HOP3 sing N N 124 DA P OP1 doub N N 125 DA P OP2 sing N N 126 DA P "O5'" sing N N 127 DA OP2 HOP2 sing N N 128 DA "O5'" "C5'" sing N N 129 DA "C5'" "C4'" sing N N 130 DA "C5'" "H5'" sing N N 131 DA "C5'" "H5''" sing N N 132 DA "C4'" "O4'" sing N N 133 DA "C4'" "C3'" sing N N 134 DA "C4'" "H4'" sing N N 135 DA "O4'" "C1'" sing N N 136 DA "C3'" "O3'" sing N N 137 DA "C3'" "C2'" sing N N 138 DA "C3'" "H3'" sing N N 139 DA "O3'" "HO3'" sing N N 140 DA "C2'" "C1'" sing N N 141 DA "C2'" "H2'" sing N N 142 DA "C2'" "H2''" sing N N 143 DA "C1'" N9 sing N N 144 DA "C1'" "H1'" sing N N 145 DA N9 C8 sing Y N 146 DA N9 C4 sing Y N 147 DA C8 N7 doub Y N 148 DA C8 H8 sing N N 149 DA N7 C5 sing Y N 150 DA C5 C6 sing Y N 151 DA C5 C4 doub Y N 152 DA C6 N6 sing N N 153 DA C6 N1 doub Y N 154 DA N6 H61 sing N N 155 DA N6 H62 sing N N 156 DA N1 C2 sing Y N 157 DA C2 N3 doub Y N 158 DA C2 H2 sing N N 159 DA N3 C4 sing Y N 160 DC OP3 P sing N N 161 DC OP3 HOP3 sing N N 162 DC P OP1 doub N N 163 DC P OP2 sing N N 164 DC P "O5'" sing N N 165 DC OP2 HOP2 sing N N 166 DC "O5'" "C5'" sing N N 167 DC "C5'" "C4'" sing N N 168 DC "C5'" "H5'" sing N N 169 DC "C5'" "H5''" sing N N 170 DC "C4'" "O4'" sing N N 171 DC "C4'" "C3'" sing N N 172 DC "C4'" "H4'" sing N N 173 DC "O4'" "C1'" sing N N 174 DC "C3'" "O3'" sing N N 175 DC "C3'" "C2'" sing N N 176 DC "C3'" "H3'" sing N N 177 DC "O3'" "HO3'" sing N N 178 DC "C2'" "C1'" sing N N 179 DC "C2'" "H2'" sing N N 180 DC "C2'" "H2''" sing N N 181 DC "C1'" N1 sing N N 182 DC "C1'" "H1'" sing N N 183 DC N1 C2 sing N N 184 DC N1 C6 sing N N 185 DC C2 O2 doub N N 186 DC C2 N3 sing N N 187 DC N3 C4 doub N N 188 DC C4 N4 sing N N 189 DC C4 C5 sing N N 190 DC N4 H41 sing N N 191 DC N4 H42 sing N N 192 DC C5 C6 doub N N 193 DC C5 H5 sing N N 194 DC C6 H6 sing N N 195 DG OP3 P sing N N 196 DG OP3 HOP3 sing N N 197 DG P OP1 doub N N 198 DG P OP2 sing N N 199 DG P "O5'" sing N N 200 DG OP2 HOP2 sing N N 201 DG "O5'" "C5'" sing N N 202 DG "C5'" "C4'" sing N N 203 DG "C5'" "H5'" sing N N 204 DG "C5'" "H5''" sing N N 205 DG "C4'" "O4'" sing N N 206 DG "C4'" "C3'" sing N N 207 DG "C4'" "H4'" sing N N 208 DG "O4'" "C1'" sing N N 209 DG "C3'" "O3'" sing N N 210 DG "C3'" "C2'" sing N N 211 DG "C3'" "H3'" sing N N 212 DG "O3'" "HO3'" sing N N 213 DG "C2'" "C1'" sing N N 214 DG "C2'" "H2'" sing N N 215 DG "C2'" "H2''" sing N N 216 DG "C1'" N9 sing N N 217 DG "C1'" "H1'" sing N N 218 DG N9 C8 sing Y N 219 DG N9 C4 sing Y N 220 DG C8 N7 doub Y N 221 DG C8 H8 sing N N 222 DG N7 C5 sing Y N 223 DG C5 C6 sing N N 224 DG C5 C4 doub Y N 225 DG C6 O6 doub N N 226 DG C6 N1 sing N N 227 DG N1 C2 sing N N 228 DG N1 H1 sing N N 229 DG C2 N2 sing N N 230 DG C2 N3 doub N N 231 DG N2 H21 sing N N 232 DG N2 H22 sing N N 233 DG N3 C4 sing N N 234 DT OP3 P sing N N 235 DT OP3 HOP3 sing N N 236 DT P OP1 doub N N 237 DT P OP2 sing N N 238 DT P "O5'" sing N N 239 DT OP2 HOP2 sing N N 240 DT "O5'" "C5'" sing N N 241 DT "C5'" "C4'" sing N N 242 DT "C5'" "H5'" sing N N 243 DT "C5'" "H5''" sing N N 244 DT "C4'" "O4'" sing N N 245 DT "C4'" "C3'" sing N N 246 DT "C4'" "H4'" sing N N 247 DT "O4'" "C1'" sing N N 248 DT "C3'" "O3'" sing N N 249 DT "C3'" "C2'" sing N N 250 DT "C3'" "H3'" sing N N 251 DT "O3'" "HO3'" sing N N 252 DT "C2'" "C1'" sing N N 253 DT "C2'" "H2'" sing N N 254 DT "C2'" "H2''" sing N N 255 DT "C1'" N1 sing N N 256 DT "C1'" "H1'" sing N N 257 DT N1 C2 sing N N 258 DT N1 C6 sing N N 259 DT C2 O2 doub N N 260 DT C2 N3 sing N N 261 DT N3 C4 sing N N 262 DT N3 H3 sing N N 263 DT C4 O4 doub N N 264 DT C4 C5 sing N N 265 DT C5 C7 sing N N 266 DT C5 C6 doub N N 267 DT C7 H71 sing N N 268 DT C7 H72 sing N N 269 DT C7 H73 sing N N 270 DT C6 H6 sing N N 271 GLN N CA sing N N 272 GLN N H sing N N 273 GLN N H2 sing N N 274 GLN CA C sing N N 275 GLN CA CB sing N N 276 GLN CA HA sing N N 277 GLN C O doub N N 278 GLN C OXT sing N N 279 GLN CB CG sing N N 280 GLN CB HB2 sing N N 281 GLN CB HB3 sing N N 282 GLN CG CD sing N N 283 GLN CG HG2 sing N N 284 GLN CG HG3 sing N N 285 GLN CD OE1 doub N N 286 GLN CD NE2 sing N N 287 GLN NE2 HE21 sing N N 288 GLN NE2 HE22 sing N N 289 GLN OXT HXT sing N N 290 GLU N CA sing N N 291 GLU N H sing N N 292 GLU N H2 sing N N 293 GLU CA C sing N N 294 GLU CA CB sing N N 295 GLU CA HA sing N N 296 GLU C O doub N N 297 GLU C OXT sing N N 298 GLU CB CG sing N N 299 GLU CB HB2 sing N N 300 GLU CB HB3 sing N N 301 GLU CG CD sing N N 302 GLU CG HG2 sing N N 303 GLU CG HG3 sing N N 304 GLU CD OE1 doub N N 305 GLU CD OE2 sing N N 306 GLU OE2 HE2 sing N N 307 GLU OXT HXT sing N N 308 GLY N CA sing N N 309 GLY N H sing N N 310 GLY N H2 sing N N 311 GLY CA C sing N N 312 GLY CA HA2 sing N N 313 GLY CA HA3 sing N N 314 GLY C O doub N N 315 GLY C OXT sing N N 316 GLY OXT HXT sing N N 317 HIS N CA sing N N 318 HIS N H sing N N 319 HIS N H2 sing N N 320 HIS CA C sing N N 321 HIS CA CB sing N N 322 HIS CA HA sing N N 323 HIS C O doub N N 324 HIS C OXT sing N N 325 HIS CB CG sing N N 326 HIS CB HB2 sing N N 327 HIS CB HB3 sing N N 328 HIS CG ND1 sing Y N 329 HIS CG CD2 doub Y N 330 HIS ND1 CE1 doub Y N 331 HIS ND1 HD1 sing N N 332 HIS CD2 NE2 sing Y N 333 HIS CD2 HD2 sing N N 334 HIS CE1 NE2 sing Y N 335 HIS CE1 HE1 sing N N 336 HIS NE2 HE2 sing N N 337 HIS OXT HXT sing N N 338 HOH O H1 sing N N 339 HOH O H2 sing N N 340 ILE N CA sing N N 341 ILE N H sing N N 342 ILE N H2 sing N N 343 ILE CA C sing N N 344 ILE CA CB sing N N 345 ILE CA HA sing N N 346 ILE C O doub N N 347 ILE C OXT sing N N 348 ILE CB CG1 sing N N 349 ILE CB CG2 sing N N 350 ILE CB HB sing N N 351 ILE CG1 CD1 sing N N 352 ILE CG1 HG12 sing N N 353 ILE CG1 HG13 sing N N 354 ILE CG2 HG21 sing N N 355 ILE CG2 HG22 sing N N 356 ILE CG2 HG23 sing N N 357 ILE CD1 HD11 sing N N 358 ILE CD1 HD12 sing N N 359 ILE CD1 HD13 sing N N 360 ILE OXT HXT sing N N 361 LEU N CA sing N N 362 LEU N H sing N N 363 LEU N H2 sing N N 364 LEU CA C sing N N 365 LEU CA CB sing N N 366 LEU CA HA sing N N 367 LEU C O doub N N 368 LEU C OXT sing N N 369 LEU CB CG sing N N 370 LEU CB HB2 sing N N 371 LEU CB HB3 sing N N 372 LEU CG CD1 sing N N 373 LEU CG CD2 sing N N 374 LEU CG HG sing N N 375 LEU CD1 HD11 sing N N 376 LEU CD1 HD12 sing N N 377 LEU CD1 HD13 sing N N 378 LEU CD2 HD21 sing N N 379 LEU CD2 HD22 sing N N 380 LEU CD2 HD23 sing N N 381 LEU OXT HXT sing N N 382 LYS N CA sing N N 383 LYS N H sing N N 384 LYS N H2 sing N N 385 LYS CA C sing N N 386 LYS CA CB sing N N 387 LYS CA HA sing N N 388 LYS C O doub N N 389 LYS C OXT sing N N 390 LYS CB CG sing N N 391 LYS CB HB2 sing N N 392 LYS CB HB3 sing N N 393 LYS CG CD sing N N 394 LYS CG HG2 sing N N 395 LYS CG HG3 sing N N 396 LYS CD CE sing N N 397 LYS CD HD2 sing N N 398 LYS CD HD3 sing N N 399 LYS CE NZ sing N N 400 LYS CE HE2 sing N N 401 LYS CE HE3 sing N N 402 LYS NZ HZ1 sing N N 403 LYS NZ HZ2 sing N N 404 LYS NZ HZ3 sing N N 405 LYS OXT HXT sing N N 406 MET N CA sing N N 407 MET N H sing N N 408 MET N H2 sing N N 409 MET CA C sing N N 410 MET CA CB sing N N 411 MET CA HA sing N N 412 MET C O doub N N 413 MET C OXT sing N N 414 MET CB CG sing N N 415 MET CB HB2 sing N N 416 MET CB HB3 sing N N 417 MET CG SD sing N N 418 MET CG HG2 sing N N 419 MET CG HG3 sing N N 420 MET SD CE sing N N 421 MET CE HE1 sing N N 422 MET CE HE2 sing N N 423 MET CE HE3 sing N N 424 MET OXT HXT sing N N 425 PHE N CA sing N N 426 PHE N H sing N N 427 PHE N H2 sing N N 428 PHE CA C sing N N 429 PHE CA CB sing N N 430 PHE CA HA sing N N 431 PHE C O doub N N 432 PHE C OXT sing N N 433 PHE CB CG sing N N 434 PHE CB HB2 sing N N 435 PHE CB HB3 sing N N 436 PHE CG CD1 doub Y N 437 PHE CG CD2 sing Y N 438 PHE CD1 CE1 sing Y N 439 PHE CD1 HD1 sing N N 440 PHE CD2 CE2 doub Y N 441 PHE CD2 HD2 sing N N 442 PHE CE1 CZ doub Y N 443 PHE CE1 HE1 sing N N 444 PHE CE2 CZ sing Y N 445 PHE CE2 HE2 sing N N 446 PHE CZ HZ sing N N 447 PHE OXT HXT sing N N 448 PRO N CA sing N N 449 PRO N CD sing N N 450 PRO N H sing N N 451 PRO CA C sing N N 452 PRO CA CB sing N N 453 PRO CA HA sing N N 454 PRO C O doub N N 455 PRO C OXT sing N N 456 PRO CB CG sing N N 457 PRO CB HB2 sing N N 458 PRO CB HB3 sing N N 459 PRO CG CD sing N N 460 PRO CG HG2 sing N N 461 PRO CG HG3 sing N N 462 PRO CD HD2 sing N N 463 PRO CD HD3 sing N N 464 PRO OXT HXT sing N N 465 SER N CA sing N N 466 SER N H sing N N 467 SER N H2 sing N N 468 SER CA C sing N N 469 SER CA CB sing N N 470 SER CA HA sing N N 471 SER C O doub N N 472 SER C OXT sing N N 473 SER CB OG sing N N 474 SER CB HB2 sing N N 475 SER CB HB3 sing N N 476 SER OG HG sing N N 477 SER OXT HXT sing N N 478 SF4 FE1 S2 sing N N 479 SF4 FE1 S3 sing N N 480 SF4 FE1 S4 sing N N 481 SF4 FE2 S1 sing N N 482 SF4 FE2 S3 sing N N 483 SF4 FE2 S4 sing N N 484 SF4 FE3 S1 sing N N 485 SF4 FE3 S2 sing N N 486 SF4 FE3 S4 sing N N 487 SF4 FE4 S1 sing N N 488 SF4 FE4 S2 sing N N 489 SF4 FE4 S3 sing N N 490 THR N CA sing N N 491 THR N H sing N N 492 THR N H2 sing N N 493 THR CA C sing N N 494 THR CA CB sing N N 495 THR CA HA sing N N 496 THR C O doub N N 497 THR C OXT sing N N 498 THR CB OG1 sing N N 499 THR CB CG2 sing N N 500 THR CB HB sing N N 501 THR OG1 HG1 sing N N 502 THR CG2 HG21 sing N N 503 THR CG2 HG22 sing N N 504 THR CG2 HG23 sing N N 505 THR OXT HXT sing N N 506 TRP N CA sing N N 507 TRP N H sing N N 508 TRP N H2 sing N N 509 TRP CA C sing N N 510 TRP CA CB sing N N 511 TRP CA HA sing N N 512 TRP C O doub N N 513 TRP C OXT sing N N 514 TRP CB CG sing N N 515 TRP CB HB2 sing N N 516 TRP CB HB3 sing N N 517 TRP CG CD1 doub Y N 518 TRP CG CD2 sing Y N 519 TRP CD1 NE1 sing Y N 520 TRP CD1 HD1 sing N N 521 TRP CD2 CE2 doub Y N 522 TRP CD2 CE3 sing Y N 523 TRP NE1 CE2 sing Y N 524 TRP NE1 HE1 sing N N 525 TRP CE2 CZ2 sing Y N 526 TRP CE3 CZ3 doub Y N 527 TRP CE3 HE3 sing N N 528 TRP CZ2 CH2 doub Y N 529 TRP CZ2 HZ2 sing N N 530 TRP CZ3 CH2 sing Y N 531 TRP CZ3 HZ3 sing N N 532 TRP CH2 HH2 sing N N 533 TRP OXT HXT sing N N 534 TYR N CA sing N N 535 TYR N H sing N N 536 TYR N H2 sing N N 537 TYR CA C sing N N 538 TYR CA CB sing N N 539 TYR CA HA sing N N 540 TYR C O doub N N 541 TYR C OXT sing N N 542 TYR CB CG sing N N 543 TYR CB HB2 sing N N 544 TYR CB HB3 sing N N 545 TYR CG CD1 doub Y N 546 TYR CG CD2 sing Y N 547 TYR CD1 CE1 sing Y N 548 TYR CD1 HD1 sing N N 549 TYR CD2 CE2 doub Y N 550 TYR CD2 HD2 sing N N 551 TYR CE1 CZ doub Y N 552 TYR CE1 HE1 sing N N 553 TYR CE2 CZ sing Y N 554 TYR CE2 HE2 sing N N 555 TYR CZ OH sing N N 556 TYR OH HH sing N N 557 TYR OXT HXT sing N N 558 VAL N CA sing N N 559 VAL N H sing N N 560 VAL N H2 sing N N 561 VAL CA C sing N N 562 VAL CA CB sing N N 563 VAL CA HA sing N N 564 VAL C O doub N N 565 VAL C OXT sing N N 566 VAL CB CG1 sing N N 567 VAL CB CG2 sing N N 568 VAL CB HB sing N N 569 VAL CG1 HG11 sing N N 570 VAL CG1 HG12 sing N N 571 VAL CG1 HG13 sing N N 572 VAL CG2 HG21 sing N N 573 VAL CG2 HG22 sing N N 574 VAL CG2 HG23 sing N N 575 VAL OXT HXT sing N N 576 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5KN9 'double helix' 5KN9 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 1 1_555 C DT 10 1_555 0.051 1.518 0.253 26.449 41.581 161.325 1 C_DA3:DT22_D C 3 ? D 22 ? 21 2 1 B DC 3 1_555 C DG 8 1_555 0.271 -0.006 0.546 -32.025 -2.211 0.470 2 C_DC5:DG20_D C 5 ? D 20 ? 19 1 1 B DC 4 1_555 C DG 7 1_555 0.081 -0.065 0.798 -26.327 -12.213 -1.041 3 C_DC6:DG19_D C 6 ? D 19 ? 19 1 1 B 8OG 5 1_555 C DA 6 1_555 0.045 -4.678 0.135 -7.795 9.132 83.376 4 C_8OG7:DA18_D C 7 ? D 18 ? ? 3 1 B DG 6 1_555 C DC 5 1_555 -0.253 -0.141 0.124 4.011 -11.098 -0.010 5 C_DG8:DC17_D C 8 ? D 17 ? 19 1 1 B DT 7 1_555 C DA 4 1_555 0.102 -0.056 0.100 3.272 -14.914 5.874 6 C_DT9:DA16_D C 9 ? D 16 ? 20 1 1 B DG 8 1_555 C DC 3 1_555 0.094 -0.303 0.105 6.385 -8.653 -1.319 7 C_DG10:DC15_D C 10 ? D 15 ? 19 1 1 B DC 9 1_555 C DG 2 1_555 0.492 -0.259 -0.029 2.703 -7.738 -0.749 8 C_DC11:DG14_D C 11 ? D 14 ? 19 1 1 B DT 10 1_555 C DA 1 1_555 0.155 -0.410 -0.014 18.351 -4.565 5.843 9 C_DT12:DA13_D C 12 ? D 13 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 3 1_555 C DG 8 1_555 B DC 4 1_555 C DG 7 1_555 -0.761 0.727 3.344 -9.958 -4.149 39.986 1.492 -0.033 3.344 -5.938 14.251 41.358 1 CC_DC5DC6:DG19DG20_DD C 5 ? D 20 ? C 6 ? D 19 ? 1 B DC 4 1_555 C DG 7 1_555 B 8OG 5 1_555 C DA 6 1_555 2.049 -3.311 1.412 -173.225 25.943 137.641 -1.681 -1.193 0.408 12.995 86.774 178.251 2 CC_DC68OG7:DA18DG19_DD C 6 ? D 19 ? C 7 ? D 18 ? 1 B 8OG 5 1_555 C DA 6 1_555 B DG 6 1_555 C DC 5 1_555 -2.824 -1.832 -2.512 137.166 -101.328 87.851 -1.563 0.542 -2.596 -51.523 -69.746 173.186 3 CC_8OG7DG8:DC17DA18_DD C 7 ? D 18 ? C 8 ? D 17 ? 1 B DG 6 1_555 C DC 5 1_555 B DT 7 1_555 C DA 4 1_555 0.578 -0.331 3.343 1.552 2.455 30.617 -1.116 -0.778 3.332 4.636 -2.931 30.751 4 CC_DG8DT9:DA16DC17_DD C 8 ? D 17 ? C 9 ? D 16 ? 1 B DT 7 1_555 C DA 4 1_555 B DG 8 1_555 C DC 3 1_555 -0.010 0.340 3.304 0.606 9.252 36.489 -0.706 0.096 3.290 14.490 -0.948 37.610 5 CC_DT9DG10:DC15DA16_DD C 9 ? D 16 ? C 10 ? D 15 ? 1 B DG 8 1_555 C DC 3 1_555 B DC 9 1_555 C DG 2 1_555 0.092 -0.619 3.381 0.048 3.333 32.622 -1.685 -0.155 3.304 5.914 -0.084 32.788 6 CC_DG10DC11:DG14DC15_DD C 10 ? D 15 ? C 11 ? D 14 ? 1 B DC 9 1_555 C DG 2 1_555 B DT 10 1_555 C DA 1 1_555 0.738 -0.396 3.065 -2.130 4.918 29.216 -1.724 -1.851 2.901 9.647 4.178 29.693 7 CC_DC11DT12:DA13DG14_DD C 11 ? D 14 ? C 12 ? D 13 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Cancer Institute (NIH/NCI)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number CA100742 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'IRON/SULFUR CLUSTER' SF4 5 'CALCIUM ION' CA 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1RRQ _pdbx_initial_refinement_model.details ? #