HEADER TRANSFERASE 06-JUL-16 5KQD TITLE PANK3:PALMITOYL-COA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PANTOTHENATE KINASE 3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 12-370; COMPND 5 SYNONYM: HPANK3,PANTOTHENIC ACID KINASE 3; COMPND 6 EC: 2.7.1.33; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PANK3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS PANK, INHIBITOR, COMPLEX, TRANSFERASE, PANTOTHENATE KINASE EXPDTA X-RAY DIFFRACTION AUTHOR S.W.WHITE,M.YUN REVDAT 4 04-OCT-23 5KQD 1 JRNL REMARK REVDAT 3 26-OCT-16 5KQD 1 JRNL REVDAT 2 07-SEP-16 5KQD 1 JRNL REVDAT 1 31-AUG-16 5KQD 0 JRNL AUTH C.SUBRAMANIAN,M.K.YUN,J.YAO,L.K.SHARMA,R.E.LEE,S.W.WHITE, JRNL AUTH 2 S.JACKOWSKI,C.O.ROCK JRNL TITL ALLOSTERIC REGULATION OF MAMMALIAN PANTOTHENATE KINASE. JRNL REF J.BIOL.CHEM. V. 291 22302 2016 JRNL REFN ESSN 1083-351X JRNL PMID 27555321 JRNL DOI 10.1074/JBC.M116.748061 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 18791 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 940 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 22.6013 - 4.9610 0.95 2648 138 0.1680 0.1913 REMARK 3 2 4.9610 - 3.9446 0.95 2552 136 0.1767 0.2011 REMARK 3 3 3.9446 - 3.4479 0.95 2530 137 0.2014 0.1795 REMARK 3 4 3.4479 - 3.1336 0.95 2513 135 0.2254 0.2200 REMARK 3 5 3.1336 - 2.9095 0.95 2537 134 0.2534 0.2981 REMARK 3 6 2.9095 - 2.7382 0.95 2500 130 0.2566 0.2769 REMARK 3 7 2.7382 - 2.6013 0.95 2517 130 0.2740 0.2965 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2478 REMARK 3 ANGLE : 1.150 3354 REMARK 3 CHIRALITY : 0.051 376 REMARK 3 PLANARITY : 0.005 415 REMARK 3 DIHEDRAL : 15.935 1438 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.2283 87.6975 120.8425 REMARK 3 T TENSOR REMARK 3 T11: 0.8177 T22: 0.6415 REMARK 3 T33: 0.8136 T12: -0.1891 REMARK 3 T13: 0.0563 T23: 0.0337 REMARK 3 L TENSOR REMARK 3 L11: 3.5947 L22: 2.3553 REMARK 3 L33: 2.2986 L12: 0.5591 REMARK 3 L13: -0.2419 L23: -0.3492 REMARK 3 S TENSOR REMARK 3 S11: -0.0444 S12: -0.3342 S13: -0.2054 REMARK 3 S21: 0.1949 S22: 0.0312 S23: -0.5248 REMARK 3 S31: -0.3243 S32: 0.2559 S33: 0.0213 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 98 THROUGH 176 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.9284 78.6310 122.8977 REMARK 3 T TENSOR REMARK 3 T11: 0.5297 T22: 0.5261 REMARK 3 T33: 0.6387 T12: -0.1175 REMARK 3 T13: -0.0816 T23: 0.1511 REMARK 3 L TENSOR REMARK 3 L11: 5.0984 L22: 2.9893 REMARK 3 L33: 2.6790 L12: 0.5394 REMARK 3 L13: -1.3215 L23: -0.1285 REMARK 3 S TENSOR REMARK 3 S11: -0.2813 S12: -0.2020 S13: -0.2602 REMARK 3 S21: -0.0566 S22: -0.0751 S23: -0.4532 REMARK 3 S31: 0.1593 S32: -0.2316 S33: 0.0093 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 177 THROUGH 269 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1361 83.4834 127.4301 REMARK 3 T TENSOR REMARK 3 T11: 0.6238 T22: 0.3845 REMARK 3 T33: 0.4150 T12: -0.0291 REMARK 3 T13: -0.0621 T23: -0.0870 REMARK 3 L TENSOR REMARK 3 L11: 3.4643 L22: 1.9133 REMARK 3 L33: 1.5909 L12: -0.3635 REMARK 3 L13: -1.1017 L23: 0.4002 REMARK 3 S TENSOR REMARK 3 S11: -0.0020 S12: -0.2311 S13: 0.4731 REMARK 3 S21: 0.1692 S22: 0.0098 S23: -0.1158 REMARK 3 S31: -0.2140 S32: 0.0150 S33: 0.0451 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 270 THROUGH 312 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.4751 89.9315 128.6032 REMARK 3 T TENSOR REMARK 3 T11: 0.6425 T22: 0.4325 REMARK 3 T33: 0.4704 T12: -0.0051 REMARK 3 T13: -0.0591 T23: -0.0944 REMARK 3 L TENSOR REMARK 3 L11: 3.5835 L22: 0.7322 REMARK 3 L33: 1.9061 L12: 1.3282 REMARK 3 L13: 0.1199 L23: -0.4746 REMARK 3 S TENSOR REMARK 3 S11: 0.0194 S12: -0.5646 S13: 0.4508 REMARK 3 S21: -0.0712 S22: 0.0640 S23: 0.3998 REMARK 3 S31: -0.6030 S32: -0.1562 S33: 0.0417 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 313 THROUGH 368 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7105 78.2667 127.6570 REMARK 3 T TENSOR REMARK 3 T11: 0.6054 T22: 0.3724 REMARK 3 T33: 0.4160 T12: -0.1122 REMARK 3 T13: -0.0698 T23: 0.1003 REMARK 3 L TENSOR REMARK 3 L11: 6.2431 L22: 2.2424 REMARK 3 L33: 2.4210 L12: 0.0875 REMARK 3 L13: -1.5896 L23: -0.1519 REMARK 3 S TENSOR REMARK 3 S11: -0.0618 S12: -0.2668 S13: 0.1763 REMARK 3 S21: 0.1927 S22: -0.1475 S23: -0.1432 REMARK 3 S31: -0.1776 S32: 0.3679 S33: 0.0640 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: TWIN REFINEMENT REMARK 4 REMARK 4 5KQD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1000222611. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18791 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 38.487 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.96800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3MK6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, TRIS, PEG 600, REMARK 280 GLYCEROL, PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 243.41400 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 55850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -138.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 121.70700 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 243.41400 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 121.70700 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 243.41400 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 GLY A -6 REMARK 465 SER A -5 REMARK 465 SER A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 1 REMARK 465 HIS A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 GLY A 5 REMARK 465 LEU A 6 REMARK 465 VAL A 7 REMARK 465 PRO A 8 REMARK 465 ARG A 9 REMARK 465 GLY A 10 REMARK 465 ASP A 32 REMARK 465 ILE A 33 REMARK 465 THR A 34 REMARK 465 ALA A 35 REMARK 465 GLU A 36 REMARK 465 GLU A 37 REMARK 465 GLY A 59 REMARK 465 SER A 60 REMARK 465 THR A 61 REMARK 465 GLY A 62 REMARK 465 ILE A 63 REMARK 465 GLY A 77 REMARK 465 ARG A 78 REMARK 465 ARG A 79 REMARK 465 GLY A 80 REMARK 465 GLY A 99 REMARK 465 ARG A 100 REMARK 465 ASP A 101 REMARK 465 LYS A 102 REMARK 465 ASN A 103 REMARK 465 PHE A 104 REMARK 465 SER A 105 REMARK 465 THR A 106 REMARK 465 LEU A 107 REMARK 465 GLN A 108 REMARK 465 THR A 109 REMARK 465 VAL A 110 REMARK 465 LEU A 111 REMARK 465 CYS A 112 REMARK 465 ALA A 113 REMARK 465 THR A 114 REMARK 465 ASP A 124 REMARK 465 PHE A 125 REMARK 465 ARG A 126 REMARK 465 THR A 127 REMARK 465 ILE A 128 REMARK 465 GLY A 129 REMARK 465 ASN A 130 REMARK 465 LEU A 131 REMARK 465 HIS A 132 REMARK 465 ALA A 166 REMARK 465 SER A 167 REMARK 465 GLU A 168 REMARK 465 PRO A 169 REMARK 465 GLU A 170 REMARK 465 ARG A 171 REMARK 465 PHE A 369 REMARK 465 SER A 370 REMARK 465 ASP A 371 REMARK 465 ASP A 372 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 16 CG SD CE REMARK 470 ILE A 31 CG1 CG2 CD1 REMARK 470 GLU A 38 CG CD OE1 OE2 REMARK 470 GLN A 39 CG CD OE1 NE2 REMARK 470 GLU A 40 CG CD OE1 OE2 REMARK 470 GLU A 41 CG CD OE1 OE2 REMARK 470 GLU A 43 CG CD OE1 OE2 REMARK 470 LEU A 45 CG CD1 CD2 REMARK 470 LYS A 46 CG CD CE NZ REMARK 470 ARG A 49 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 50 CG CD CE NZ REMARK 470 ASN A 55 CG OD1 ND2 REMARK 470 ARG A 64 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 72 CG OD1 OD2 REMARK 470 ILE A 96 CG1 CG2 CD1 REMARK 470 GLN A 97 CG CD OE1 NE2 REMARK 470 MET A 98 CG SD CE REMARK 470 LYS A 120 CG CD CE NZ REMARK 470 ASP A 181 CG OD1 OD2 REMARK 470 GLU A 229 CG CD OE1 OE2 REMARK 470 ASN A 327 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP A 288 N ALA A 292 2.05 REMARK 500 OD2 ASP A 247 N PHE A 272 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 153 -176.89 67.65 REMARK 500 ASP A 181 66.64 -114.21 REMARK 500 THR A 209 -175.47 -171.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PKZ A 401 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PKZ A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5KPR RELATED DB: PDB REMARK 900 RELATED ID: 5KPT RELATED DB: PDB REMARK 900 RELATED ID: 5KPZ RELATED DB: PDB REMARK 900 RELATED ID: 5KQ8 RELATED DB: PDB DBREF 5KQD A 12 370 UNP Q9H999 PANK3_HUMAN 12 370 SEQADV 5KQD MET A -7 UNP Q9H999 INITIATING METHIONINE SEQADV 5KQD GLY A -6 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD SER A -5 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD SER A -4 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD HIS A -3 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD HIS A -2 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD HIS A -1 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD HIS A 0 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD HIS A 1 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD HIS A 2 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD SER A 3 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD SER A 4 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD GLY A 5 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD LEU A 6 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD VAL A 7 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD PRO A 8 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD ARG A 9 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD GLY A 10 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD SER A 11 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD ASP A 371 UNP Q9H999 EXPRESSION TAG SEQADV 5KQD ASP A 372 UNP Q9H999 EXPRESSION TAG SEQRES 1 A 380 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 380 LEU VAL PRO ARG GLY SER PRO TRP PHE GLY MET ASP ILE SEQRES 3 A 380 GLY GLY THR LEU VAL LYS LEU SER TYR PHE GLU PRO ILE SEQRES 4 A 380 ASP ILE THR ALA GLU GLU GLU GLN GLU GLU VAL GLU SER SEQRES 5 A 380 LEU LYS SER ILE ARG LYS TYR LEU THR SER ASN VAL ALA SEQRES 6 A 380 TYR GLY SER THR GLY ILE ARG ASP VAL HIS LEU GLU LEU SEQRES 7 A 380 LYS ASP LEU THR LEU PHE GLY ARG ARG GLY ASN LEU HIS SEQRES 8 A 380 PHE ILE ARG PHE PRO THR GLN ASP LEU PRO THR PHE ILE SEQRES 9 A 380 GLN MET GLY ARG ASP LYS ASN PHE SER THR LEU GLN THR SEQRES 10 A 380 VAL LEU CYS ALA THR GLY GLY GLY ALA TYR LYS PHE GLU SEQRES 11 A 380 LYS ASP PHE ARG THR ILE GLY ASN LEU HIS LEU HIS LYS SEQRES 12 A 380 LEU ASP GLU LEU ASP CYS LEU VAL LYS GLY LEU LEU TYR SEQRES 13 A 380 ILE ASP SER VAL SER PHE ASN GLY GLN ALA GLU CYS TYR SEQRES 14 A 380 TYR PHE ALA ASN ALA SER GLU PRO GLU ARG CYS GLN LYS SEQRES 15 A 380 MET PRO PHE ASN LEU ASP ASP PRO TYR PRO LEU LEU VAL SEQRES 16 A 380 VAL ASN ILE GLY SER GLY VAL SER ILE LEU ALA VAL HIS SEQRES 17 A 380 SER LYS ASP ASN TYR LYS ARG VAL THR GLY THR SER LEU SEQRES 18 A 380 GLY GLY GLY THR PHE LEU GLY LEU CYS SER LEU LEU THR SEQRES 19 A 380 GLY CYS GLU SER PHE GLU GLU ALA LEU GLU MET ALA SER SEQRES 20 A 380 LYS GLY ASP SER THR GLN ALA ASP LYS LEU VAL ARG ASP SEQRES 21 A 380 ILE TYR GLY GLY ASP TYR GLU ARG PHE GLY LEU PRO GLY SEQRES 22 A 380 TRP ALA VAL ALA SER SER PHE GLY ASN MET ILE TYR LYS SEQRES 23 A 380 GLU LYS ARG GLU SER VAL SER LYS GLU ASP LEU ALA ARG SEQRES 24 A 380 ALA THR LEU VAL THR ILE THR ASN ASN ILE GLY SER VAL SEQRES 25 A 380 ALA ARG MET CYS ALA VAL ASN GLU LYS ILE ASN ARG VAL SEQRES 26 A 380 VAL PHE VAL GLY ASN PHE LEU ARG VAL ASN THR LEU SER SEQRES 27 A 380 MET LYS LEU LEU ALA TYR ALA LEU ASP TYR TRP SER LYS SEQRES 28 A 380 GLY GLN LEU LYS ALA LEU PHE LEU GLU HIS GLU GLY TYR SEQRES 29 A 380 PHE GLY ALA VAL GLY ALA LEU LEU GLY LEU PRO ASN PHE SEQRES 30 A 380 SER ASP ASP HET PKZ A 401 61 HET SO4 A 402 5 HETNAM PKZ PALMITOYL-COA HETNAM SO4 SULFATE ION FORMUL 2 PKZ C37 H66 N7 O17 P3 S FORMUL 3 SO4 O4 S 2- HELIX 1 AA1 GLN A 39 ALA A 57 1 19 HELIX 2 AA2 GLN A 90 LEU A 92 5 3 HELIX 3 AA3 PRO A 93 MET A 98 1 6 HELIX 4 AA4 GLY A 116 GLU A 122 1 7 HELIX 5 AA5 ASP A 137 SER A 153 1 17 HELIX 6 AA6 GLY A 214 GLY A 227 1 14 HELIX 7 AA7 SER A 230 GLY A 241 1 12 HELIX 8 AA8 ASP A 242 ALA A 246 5 5 HELIX 9 AA9 VAL A 250 GLY A 255 1 6 HELIX 10 AB1 PHE A 272 ILE A 276 5 5 HELIX 11 AB2 TYR A 277 SER A 283 1 7 HELIX 12 AB3 SER A 285 LYS A 313 1 29 HELIX 13 AB4 GLY A 321 ARG A 325 5 5 HELIX 14 AB5 ASN A 327 SER A 342 1 16 HELIX 15 AB6 TYR A 356 LEU A 364 1 9 SHEET 1 AA1 3 PHE A 14 ILE A 18 0 SHEET 2 AA1 3 LEU A 22 PHE A 28 -1 O LYS A 24 N ASP A 17 SHEET 3 AA1 3 LEU A 82 PRO A 88 -1 O ILE A 85 N LEU A 25 SHEET 1 AA2 7 GLN A 173 PRO A 176 0 SHEET 2 AA2 7 CYS A 160 ALA A 164 -1 N TYR A 162 O MET A 175 SHEET 3 AA2 7 ALA A 348 LEU A 351 -1 O PHE A 350 N TYR A 161 SHEET 4 AA2 7 VAL A 317 VAL A 320 1 N PHE A 319 O LEU A 349 SHEET 5 AA2 7 LEU A 185 ILE A 190 1 N ILE A 190 O VAL A 320 SHEET 6 AA2 7 VAL A 194 SER A 201 -1 O VAL A 199 N LEU A 185 SHEET 7 AA2 7 ASN A 204 THR A 211 -1 O THR A 209 N ILE A 196 SHEET 1 AA3 2 LYS A 248 LEU A 249 0 SHEET 2 AA3 2 VAL A 268 SER A 270 -1 O SER A 270 N LYS A 248 CISPEP 1 TYR A 183 PRO A 184 0 -8.34 SITE 1 AC1 25 GLY A 19 GLY A 20 THR A 21 LEU A 22 SITE 2 AC1 25 LYS A 24 GLY A 116 GLY A 117 TYR A 119 SITE 3 AC1 25 ASN A 165 ASN A 189 GLY A 191 SER A 192 SITE 4 AC1 25 GLY A 193 VAL A 194 SER A 195 ARG A 207 SITE 5 AC1 25 GLY A 210 THR A 211 ILE A 253 TYR A 254 SITE 6 AC1 25 ALA A 267 VAL A 268 ALA A 269 ASN A 299 SITE 7 AC1 25 ASN A 322 SITE 1 AC2 5 PRO A 184 HIS A 200 ASN A 204 ASN A 315 SITE 2 AC2 5 ARG A 316 CRYST1 121.707 121.707 121.707 90.00 90.00 90.00 P 2 3 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008216 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008216 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008216 0.00000