data_5KQE # _entry.id 5KQE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5KQE pdb_00005kqe 10.2210/pdb5kqe/pdb WWPDB D_1000220773 ? ? BMRB 30132 ? 10.13018/BMR30132 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-08-24 2 'Structure model' 1 1 2016-08-31 3 'Structure model' 1 2 2016-09-14 4 'Structure model' 1 3 2017-09-27 5 'Structure model' 1 4 2019-11-27 6 'Structure model' 1 5 2023-06-14 7 'Structure model' 1 6 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Structure summary' 6 5 'Structure model' 'Author supporting evidence' 7 5 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' 9 6 'Structure model' Other 10 7 'Structure model' 'Data collection' 11 7 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' entity 3 4 'Structure model' pdbx_audit_support 4 5 'Structure model' pdbx_audit_support 5 5 'Structure model' pdbx_nmr_software 6 5 'Structure model' pdbx_nmr_spectrometer 7 6 'Structure model' database_2 8 6 'Structure model' pdbx_database_status 9 7 'Structure model' chem_comp_atom 10 7 'Structure model' chem_comp_bond 11 7 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_entity.pdbx_number_of_molecules' 3 4 'Structure model' '_pdbx_audit_support.funding_organization' 4 5 'Structure model' '_pdbx_audit_support.funding_organization' 5 5 'Structure model' '_pdbx_nmr_software.name' 6 5 'Structure model' '_pdbx_nmr_spectrometer.model' 7 6 'Structure model' '_database_2.pdbx_DOI' 8 6 'Structure model' '_database_2.pdbx_database_accession' 9 6 'Structure model' '_pdbx_database_status.status_code_nmr_data' 10 7 'Structure model' '_database_2.pdbx_DOI' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5KQE _pdbx_database_status.recvd_initial_deposition_date 2016-07-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # _pdbx_database_related.db_name BMRB _pdbx_database_related.details . _pdbx_database_related.db_id 30132 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, Y.' 1 'Feigon, J.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 113 _citation.language ? _citation.page_first E5125 _citation.page_last E5134 _citation.title 'Structural conservation in the template/pseudoknot domain of vertebrate telomerase RNA from teleost fish to human.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.1607411113 _citation.pdbx_database_id_PubMed 27531956 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, Y.' 1 ? primary 'Yesselman, J.D.' 2 ? primary 'Zhang, Q.' 3 ? primary 'Kang, M.' 4 ? primary 'Feigon, J.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Telomerase RNA P2ab' _entity.formula_weight 11464.795 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGGUGUACUUAACGUUUGCUUCGGCAAACUACAUCC _entity_poly.pdbx_seq_one_letter_code_can GGGUGUACUUAACGUUUGCUUCGGCAAACUACAUCC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 G n 1 4 U n 1 5 G n 1 6 U n 1 7 A n 1 8 C n 1 9 U n 1 10 U n 1 11 A n 1 12 A n 1 13 C n 1 14 G n 1 15 U n 1 16 U n 1 17 U n 1 18 G n 1 19 C n 1 20 U n 1 21 U n 1 22 C n 1 23 G n 1 24 G n 1 25 C n 1 26 A n 1 27 A n 1 28 A n 1 29 C n 1 30 U n 1 31 A n 1 32 C n 1 33 A n 1 34 U n 1 35 C n 1 36 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 36 _pdbx_entity_src_syn.organism_scientific 'Oryzias latipes' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 8090 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G GUA A . n A 1 2 G 2 2 2 G GUA A . n A 1 3 G 3 3 3 G GUA A . n A 1 4 U 4 4 4 U URI A . n A 1 5 G 5 5 5 G GUA A . n A 1 6 U 6 6 6 U URI A . n A 1 7 A 7 7 7 A ADE A . n A 1 8 C 8 8 8 C CYT A . n A 1 9 U 9 9 9 U URI A . n A 1 10 U 10 10 10 U URI A . n A 1 11 A 11 11 11 A ADE A . n A 1 12 A 12 12 12 A ADE A . n A 1 13 C 13 13 13 C CYT A . n A 1 14 G 14 14 14 G GUA A . n A 1 15 U 15 15 15 U URI A . n A 1 16 U 16 16 16 U URI A . n A 1 17 U 17 17 17 U URI A . n A 1 18 G 18 18 18 G GUA A . n A 1 19 C 19 19 19 C CYT A . n A 1 20 U 20 20 20 U URI A . n A 1 21 U 21 21 21 U URI A . n A 1 22 C 22 22 22 C CYT A . n A 1 23 G 23 23 23 G GUA A . n A 1 24 G 24 24 24 G GUA A . n A 1 25 C 25 25 25 C CYT A . n A 1 26 A 26 26 26 A ADE A . n A 1 27 A 27 27 27 A ADE A . n A 1 28 A 28 28 28 A ADE A . n A 1 29 C 29 29 29 C CYT A . n A 1 30 U 30 30 30 U URI A . n A 1 31 A 31 31 31 A ADE A . n A 1 32 C 32 32 32 C CYT A . n A 1 33 A 33 33 33 A ADE A . n A 1 34 U 34 34 34 U URI A . n A 1 35 C 35 35 35 C CYT A . n A 1 36 C 36 36 36 C CYT A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5KQE _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5KQE _struct.title 'Solution structure of P2a-J2a/b-P2b of medaka telomerase RNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5KQE _struct_keywords.text 'Telomerase RNA TR Medaka P2ab, RNA' _struct_keywords.pdbx_keywords RNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5KQE _struct_ref.pdbx_db_accession 5KQE _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5KQE _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 36 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5KQE _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 36 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 36 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 36 N3 ? ? A G 1 A C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 36 O2 ? ? A G 1 A C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 36 N4 ? ? A G 1 A C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 35 N3 ? ? A G 2 A C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 35 O2 ? ? A G 2 A C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 35 N4 ? ? A G 2 A C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 3 N1 ? ? ? 1_555 A U 34 O2 ? ? A G 3 A U 34 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog8 hydrog ? ? A G 3 O6 ? ? ? 1_555 A U 34 N3 ? ? A G 3 A U 34 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog9 hydrog ? ? A U 4 N3 ? ? ? 1_555 A A 33 N1 ? ? A U 4 A A 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 4 O4 ? ? ? 1_555 A A 33 N6 ? ? A U 4 A A 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 32 N3 ? ? A G 5 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 32 O2 ? ? A G 5 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 32 N4 ? ? A G 5 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 31 N1 ? ? A U 6 A A 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 31 N6 ? ? A U 6 A A 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A A 12 N1 ? ? ? 1_555 A U 30 N3 ? ? A A 12 A U 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A A 12 N6 ? ? ? 1_555 A U 30 O4 ? ? A A 12 A U 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 13 N4 ? ? ? 1_555 A U 30 O2 ? ? A C 13 A U 30 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog19 hydrog ? ? A G 14 N1 ? ? ? 1_555 A C 29 N3 ? ? A G 14 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 14 N2 ? ? ? 1_555 A C 29 O2 ? ? A G 14 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 14 O6 ? ? ? 1_555 A C 29 N4 ? ? A G 14 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A U 15 N3 ? ? ? 1_555 A A 28 N1 ? ? A U 15 A A 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A U 15 O4 ? ? ? 1_555 A A 28 N6 ? ? A U 15 A A 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A U 16 N3 ? ? ? 1_555 A A 27 N1 ? ? A U 16 A A 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A U 16 O4 ? ? ? 1_555 A A 27 N6 ? ? A U 16 A A 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A U 17 N3 ? ? ? 1_555 A A 26 N1 ? ? A U 17 A A 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A U 17 O4 ? ? ? 1_555 A A 26 N6 ? ? A U 17 A A 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 18 N1 ? ? ? 1_555 A C 25 N3 ? ? A G 18 A C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 18 N2 ? ? ? 1_555 A C 25 O2 ? ? A G 18 A C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 18 O6 ? ? ? 1_555 A C 25 N4 ? ? A G 18 A C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A C 19 N3 ? ? ? 1_555 A G 24 N1 ? ? A C 19 A G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 19 N4 ? ? ? 1_555 A G 24 O6 ? ? A C 19 A G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A C 19 O2 ? ? ? 1_555 A G 24 N2 ? ? A C 19 A G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A U 20 O2 ? ? ? 1_555 A G 23 N1 ? ? A U 20 A G 23 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog35 hydrog ? ? A U 20 O2 ? ? ? 1_555 A G 24 N1 ? ? A U 20 A G 24 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 C A 13 ? ? 0.060 'SIDE CHAIN' 2 3 C A 13 ? ? 0.061 'SIDE CHAIN' 3 9 C A 13 ? ? 0.058 'SIDE CHAIN' 4 10 C A 13 ? ? 0.067 'SIDE CHAIN' 5 13 C A 13 ? ? 0.057 'SIDE CHAIN' 6 19 C A 13 ? ? 0.056 'SIDE CHAIN' 7 20 C A 13 ? ? 0.062 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 5KQE _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5KQE _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 5 '10 mM sodium phosphate, 100 mM potassium chloride, 1.0 mM [U-13C; U-15N] Telomerase RNA P2ab, 90% H2O/10% D2O' '90% H2O/10% D2O' 13C_15N_H2O solution 'labelled sample' 2 '10 mM sodium phosphate, 100 mM potassium chloride, 1.0 mM [U-13C; U-15N] Telomerase RNA P2ab, 100% D2O' '100% D2O' 13C_15N_D2O solution 'labelled sample' 3 '10 mM sodium phosphate, 100 mM potassium chloride, 1.0 mM Telomerase RNA P2ab, 90% H2O/10% D2O' '90% H2O/10% D2O' H2O solution 'unlabelled sample' 4 '10 mM sodium phosphate, 100 mM potassium chloride, 1.0 mM Telomerase RNA P2ab, 100% D2O' '100% D2O' D2O solution 'unlabelled sample' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 5 'sodium phosphate' 10 ? mM 'natural abundance' 5 'potassium chloride' 100 ? mM 'natural abundance' 5 'Telomerase RNA P2ab' 1.0 ? mM '[U-13C; U-15N]' 2 'sodium phosphate' 10 ? mM 'natural abundance' 2 'potassium chloride' 100 ? mM 'natural abundance' 2 'Telomerase RNA P2ab' 1.0 ? mM '[U-13C; U-15N]' 3 'sodium phosphate' 10 ? mM 'natural abundance' 3 'potassium chloride' 100 ? mM 'natural abundance' 3 'Telomerase RNA P2ab' 1.0 ? mM 'natural abundance' 4 'sodium phosphate' 10 ? mM 'natural abundance' 4 'potassium chloride' 100 ? mM 'natural abundance' 4 'Telomerase RNA P2ab' 1.0 ? mM 'natural abundance' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 283 atm 1 6.4 100 ? ? mM conditions_283 ? pH ? ? K 2 298 atm 1 6.4 100 ? ? mM conditions_298 ? pH ? ? K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 3 '2D 1H-1H NOESY' 1 isotropic 2 1 3 '2D 1H-1H TOCSY' 1 isotropic 3 2 4 '2D 1H-1H NOESY' 1 isotropic 4 2 4 '2D 1H-1H TOCSY' 1 isotropic 5 1 5 '2D 1H-15N HSQC' 2 isotropic 6 2 5 '2D 1H-13C HSQC' 2 isotropic 7 1 2 '3D HCCH-TOCSY' 2 isotropic 8 2 2 '2D filtered/edited NOESY' 2 isotropic 9 1 3 '2D DQF-COSY' 3 isotropic 10 1 3 JNN-COSY 2 isotropic # _pdbx_nmr_refine.entry_id 5KQE _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 6 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 collection TopSpin ? 'Bruker Biospin' 2 processing TopSpin ? 'Bruker Biospin' 4 'peak picking' Sparky ? Goddard 3 'chemical shift assignment' Sparky ? Goddard 5 'structure calculation' 'X-PLOR NIH' 2.42 'Schwieters, Kuszewski, Tjandra and Clore' 6 refinement 'X-PLOR NIH' ? 'Schwieters, Kuszewski, Tjandra and Clore' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 U OP3 O N N 111 U P P N N 112 U OP1 O N N 113 U OP2 O N N 114 U "O5'" O N N 115 U "C5'" C N N 116 U "C4'" C N R 117 U "O4'" O N N 118 U "C3'" C N S 119 U "O3'" O N N 120 U "C2'" C N R 121 U "O2'" O N N 122 U "C1'" C N R 123 U N1 N N N 124 U C2 C N N 125 U O2 O N N 126 U N3 N N N 127 U C4 C N N 128 U O4 O N N 129 U C5 C N N 130 U C6 C N N 131 U HOP3 H N N 132 U HOP2 H N N 133 U "H5'" H N N 134 U "H5''" H N N 135 U "H4'" H N N 136 U "H3'" H N N 137 U "HO3'" H N N 138 U "H2'" H N N 139 U "HO2'" H N N 140 U "H1'" H N N 141 U H3 H N N 142 U H5 H N N 143 U H6 H N N 144 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 U OP3 P sing N N 116 U OP3 HOP3 sing N N 117 U P OP1 doub N N 118 U P OP2 sing N N 119 U P "O5'" sing N N 120 U OP2 HOP2 sing N N 121 U "O5'" "C5'" sing N N 122 U "C5'" "C4'" sing N N 123 U "C5'" "H5'" sing N N 124 U "C5'" "H5''" sing N N 125 U "C4'" "O4'" sing N N 126 U "C4'" "C3'" sing N N 127 U "C4'" "H4'" sing N N 128 U "O4'" "C1'" sing N N 129 U "C3'" "O3'" sing N N 130 U "C3'" "C2'" sing N N 131 U "C3'" "H3'" sing N N 132 U "O3'" "HO3'" sing N N 133 U "C2'" "O2'" sing N N 134 U "C2'" "C1'" sing N N 135 U "C2'" "H2'" sing N N 136 U "O2'" "HO2'" sing N N 137 U "C1'" N1 sing N N 138 U "C1'" "H1'" sing N N 139 U N1 C2 sing N N 140 U N1 C6 sing N N 141 U C2 O2 doub N N 142 U C2 N3 sing N N 143 U N3 C4 sing N N 144 U N3 H3 sing N N 145 U C4 O4 doub N N 146 U C4 C5 sing N N 147 U C5 C6 doub N N 148 U C5 H5 sing N N 149 U C6 H6 sing N N 150 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5KQE 'double helix' 5KQE 'a-form double helix' 5KQE tetraloop 5KQE 'bulge loop' 5KQE 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 36 1_555 -1.248 -0.324 -0.075 7.157 -3.867 2.812 1 A_G1:C36_A A 1 ? A 36 ? 19 1 1 A G 2 1_555 A C 35 1_555 -0.942 -0.371 0.346 0.913 -7.409 -0.276 2 A_G2:C35_A A 2 ? A 35 ? 19 1 1 A G 3 1_555 A U 34 1_555 -1.442 -0.262 0.396 3.086 -14.533 2.518 3 A_G3:U34_A A 3 ? A 34 ? 28 1 1 A U 4 1_555 A A 33 1_555 -0.306 0.144 0.220 -6.247 -3.949 2.229 4 A_U4:A33_A A 4 ? A 33 ? 20 1 1 A G 5 1_555 A C 32 1_555 0.814 -0.157 0.567 -1.209 -11.612 -3.377 5 A_G5:C32_A A 5 ? A 32 ? 19 1 1 A U 6 1_555 A A 31 1_555 -1.307 -0.065 0.411 -3.305 -4.011 -1.464 6 A_U6:A31_A A 6 ? A 31 ? 20 1 1 A A 12 1_555 A U 30 1_555 -0.729 -0.290 -1.085 -2.362 -6.608 -16.843 7 A_A12:U30_A A 12 ? A 30 ? 20 1 1 A G 14 1_555 A C 29 1_555 0.545 0.057 -0.215 -4.752 -4.730 4.761 8 A_G14:C29_A A 14 ? A 29 ? 19 1 1 A U 15 1_555 A A 28 1_555 -0.676 -0.068 0.178 -0.059 -9.198 3.438 9 A_U15:A28_A A 15 ? A 28 ? 20 1 1 A U 16 1_555 A A 27 1_555 0.811 -0.054 0.087 1.716 -9.600 2.053 10 A_U16:A27_A A 16 ? A 27 ? 20 1 1 A U 17 1_555 A A 26 1_555 -0.422 -0.124 0.430 1.082 -6.569 10.615 11 A_U17:A26_A A 17 ? A 26 ? 20 1 1 A G 18 1_555 A C 25 1_555 0.375 -0.187 0.466 5.925 -16.216 0.296 12 A_G18:C25_A A 18 ? A 25 ? 19 1 1 A C 19 1_555 A G 24 1_555 -0.566 0.083 -0.186 0.593 3.256 -5.547 13 A_C19:G24_A A 19 ? A 24 ? 19 1 1 A U 20 1_555 A G 23 1_555 1.320 -5.493 -0.014 -1.758 -11.668 -104.116 14 A_U20:G23_A A 20 ? A 23 ? ? 6 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 36 1_555 A G 2 1_555 A C 35 1_555 0.189 -1.670 3.133 -4.735 10.189 34.899 -3.900 -0.877 2.517 16.468 7.654 36.610 1 AA_G1G2:C35C36_AA A 1 ? A 36 ? A 2 ? A 35 ? 1 A G 2 1_555 A C 35 1_555 A G 3 1_555 A U 34 1_555 0.852 -1.925 2.739 -1.070 3.793 32.479 -3.943 -1.661 2.476 6.749 1.904 32.711 2 AA_G2G3:U34C35_AA A 2 ? A 35 ? A 3 ? A 34 ? 1 A G 3 1_555 A U 34 1_555 A U 4 1_555 A A 33 1_555 0.054 -1.887 3.469 0.044 0.590 34.452 -3.282 -0.085 3.438 0.997 -0.074 34.457 3 AA_G3U4:A33U34_AA A 3 ? A 34 ? A 4 ? A 33 ? 1 A U 4 1_555 A A 33 1_555 A G 5 1_555 A C 32 1_555 -0.287 -1.496 2.859 0.378 1.878 34.396 -2.778 0.536 2.773 3.172 -0.639 34.448 4 AA_U4G5:C32A33_AA A 4 ? A 33 ? A 5 ? A 32 ? 1 A G 5 1_555 A C 32 1_555 A U 6 1_555 A A 31 1_555 1.193 -1.832 3.000 3.229 -4.353 30.267 -2.624 -1.633 3.331 -8.254 -6.123 30.737 5 AA_G5U6:A31C32_AA A 5 ? A 32 ? A 6 ? A 31 ? 1 A A 12 1_555 A U 30 1_555 A G 14 1_555 A C 29 1_555 -1.535 -2.060 5.578 1.728 5.047 48.321 -3.150 2.086 5.296 6.144 -2.103 48.597 6 AA_A12G14:C29U30_AA A 12 ? A 30 ? A 14 ? A 29 ? 1 A G 14 1_555 A C 29 1_555 A U 15 1_555 A A 28 1_555 -0.634 -1.559 2.900 -5.443 -3.117 30.237 -2.367 0.211 3.105 -5.896 10.295 30.866 7 AA_G14U15:A28C29_AA A 14 ? A 29 ? A 15 ? A 28 ? 1 A U 15 1_555 A A 28 1_555 A U 16 1_555 A A 27 1_555 1.109 -1.580 2.833 2.307 5.035 38.585 -2.884 -1.427 2.673 7.572 -3.469 38.966 8 AA_U15U16:A27A28_AA A 15 ? A 28 ? A 16 ? A 27 ? 1 A U 16 1_555 A A 27 1_555 A U 17 1_555 A A 26 1_555 0.052 -1.968 2.973 -0.567 8.999 24.403 -6.367 -0.242 2.122 20.419 1.285 25.992 9 AA_U16U17:A26A27_AA A 16 ? A 27 ? A 17 ? A 26 ? 1 A U 17 1_555 A A 26 1_555 A G 18 1_555 A C 25 1_555 -0.537 -1.450 2.735 0.574 4.160 33.372 -3.056 1.005 2.531 7.209 -0.995 33.628 10 AA_U17G18:C25A26_AA A 17 ? A 26 ? A 18 ? A 25 ? 1 A G 18 1_555 A C 25 1_555 A C 19 1_555 A G 24 1_555 -1.075 -2.183 3.106 0.245 3.742 31.250 -4.661 2.024 2.823 6.916 -0.453 31.469 11 AA_G18C19:G24C25_AA A 18 ? A 25 ? A 19 ? A 24 ? 1 A C 19 1_555 A G 24 1_555 A U 20 1_555 A G 23 1_555 0.737 -1.612 2.787 11.269 9.656 107.019 -1.104 -0.332 2.728 5.987 -6.987 107.727 12 AA_C19U20:G23G24_AA A 19 ? A 24 ? A 20 ? A 23 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM48123 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM112503 2 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM112294 3 'National Science Foundation (NSF, United States)' 'United States' MCB1517625 4 'Department of Energy (DOE, United States)' 'United States' DE-FC03-02ER63421 5 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 AVANCE ? Bruker 800 ? 2 DRX ? Bruker 600 ? 3 DMX ? Bruker 500 ? # _atom_sites.entry_id 5KQE _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_