data_5KS5 # _entry.id 5KS5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5KS5 pdb_00005ks5 10.2210/pdb5ks5/pdb WWPDB D_1000222631 ? ? BMRB 30135 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details . _pdbx_database_related.db_id 30135 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5KS5 _pdbx_database_status.recvd_initial_deposition_date 2016-07-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Piserchio, A.' 1 ? 'Will, N.' 2 ? 'Snyder, I.' 3 ? 'Ferguson, S.B.' 4 ? 'Giles, D.H.' 5 ? 'Dalby, K.N.' 6 ? 'Ghose, R.' 7 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biochemistry _citation.journal_id_ASTM BICHAW _citation.journal_id_CSD 0033 _citation.journal_id_ISSN 0006-2960 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 55 _citation.language ? _citation.page_first 5377 _citation.page_last 5386 _citation.title 'Structure of the C-Terminal Helical Repeat Domain of Eukaryotic Elongation Factor 2 Kinase.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.biochem.6b00711 _citation.pdbx_database_id_PubMed 27571275 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Will, N.' 1 ? primary 'Piserchio, A.' 2 ? primary 'Snyder, I.' 3 ? primary 'Ferguson, S.B.' 4 ? primary 'Giles, D.H.' 5 ? primary 'Dalby, K.N.' 6 ? primary 'Ghose, R.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Eukaryotic elongation factor 2 kinase' _entity.formula_weight 11856.014 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 2.7.11.20 _entity.pdbx_mutation ? _entity.pdbx_fragment 'UNP residues 627-725' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'eEF-2K,Calcium/calmodulin-dependent eukaryotic elongation factor 2 kinase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMSPDRCQDWLEALHWYNTALEMTDCDEGGEYDGMQDEPRYMMLAREAEMLFTGGYGLEKDPQRSGDLYTQAAEAAME AMKGRLANQYYQKAEEAWAQMEE ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMSPDRCQDWLEALHWYNTALEMTDCDEGGEYDGMQDEPRYMMLAREAEMLFTGGYGLEKDPQRSGDLYTQAAEAAME AMKGRLANQYYQKAEEAWAQMEE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 SER n 1 6 PRO n 1 7 ASP n 1 8 ARG n 1 9 CYS n 1 10 GLN n 1 11 ASP n 1 12 TRP n 1 13 LEU n 1 14 GLU n 1 15 ALA n 1 16 LEU n 1 17 HIS n 1 18 TRP n 1 19 TYR n 1 20 ASN n 1 21 THR n 1 22 ALA n 1 23 LEU n 1 24 GLU n 1 25 MET n 1 26 THR n 1 27 ASP n 1 28 CYS n 1 29 ASP n 1 30 GLU n 1 31 GLY n 1 32 GLY n 1 33 GLU n 1 34 TYR n 1 35 ASP n 1 36 GLY n 1 37 MET n 1 38 GLN n 1 39 ASP n 1 40 GLU n 1 41 PRO n 1 42 ARG n 1 43 TYR n 1 44 MET n 1 45 MET n 1 46 LEU n 1 47 ALA n 1 48 ARG n 1 49 GLU n 1 50 ALA n 1 51 GLU n 1 52 MET n 1 53 LEU n 1 54 PHE n 1 55 THR n 1 56 GLY n 1 57 GLY n 1 58 TYR n 1 59 GLY n 1 60 LEU n 1 61 GLU n 1 62 LYS n 1 63 ASP n 1 64 PRO n 1 65 GLN n 1 66 ARG n 1 67 SER n 1 68 GLY n 1 69 ASP n 1 70 LEU n 1 71 TYR n 1 72 THR n 1 73 GLN n 1 74 ALA n 1 75 ALA n 1 76 GLU n 1 77 ALA n 1 78 ALA n 1 79 MET n 1 80 GLU n 1 81 ALA n 1 82 MET n 1 83 LYS n 1 84 GLY n 1 85 ARG n 1 86 LEU n 1 87 ALA n 1 88 ASN n 1 89 GLN n 1 90 TYR n 1 91 TYR n 1 92 GLN n 1 93 LYS n 1 94 ALA n 1 95 GLU n 1 96 GLU n 1 97 ALA n 1 98 TRP n 1 99 ALA n 1 100 GLN n 1 101 MET n 1 102 GLU n 1 103 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 103 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene EEF2K _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type pET15b _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name S3 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code EF2K_HUMAN _struct_ref.pdbx_db_accession O00418 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SPDRCQDWLEALHWYNTALEMTDCDEGGEYDGMQDEPRYMMLAREAEMLFTGGYGLEKDPQRSGDLYTQAAEAAMEAMKG RLANQYYQKAEEAWAQMEE ; _struct_ref.pdbx_align_begin 627 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5KS5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 103 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O00418 _struct_ref_seq.db_align_beg 627 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 725 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 627 _struct_ref_seq.pdbx_auth_seq_align_end 725 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5KS5 GLY A 1 ? UNP O00418 ? ? 'expression tag' 623 1 1 5KS5 SER A 2 ? UNP O00418 ? ? 'expression tag' 624 2 1 5KS5 HIS A 3 ? UNP O00418 ? ? 'expression tag' 625 3 1 5KS5 MET A 4 ? UNP O00418 ? ? 'expression tag' 626 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 HNCO 1 isotropic 2 1 1 HNCACO 1 isotropic 3 1 1 '3D HNCACB' 1 isotropic 4 1 1 '3D CBCA(CO)NH' 1 isotropic 5 1 1 'H(CC)CONH' 1 isotropic 6 1 1 '(H)CCCONH' 1 isotropic 7 2 2 '3D HCCH-TOCSY' 4 isotropic 8 1 1 '3D 1H-15N NOESY' 4 isotropic 9 2 2 '3D 1H-13C NOESY aliphatic' 2 isotropic 10 1 1 '3D 1H-15N NOESY aromatic' 3 isotropic 11 2 2 '2D 1H-1H NOESY' 4 isotropic 12 1 3 '15N IPAP' 5 anisotropic # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 298.15 atm 1 6.5 '50 mM Sodium Phosphate' ? ? mM H2O ? pH ? 0.2 K 2 298.15 atm 1 6.5 '50 mM Sodium Phosphate' ? ? mM D2O ? pH* ? 0.2 K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '600 uM [U-99% 13C; U-99% 15N] eEF2K_627-725, 50 mM sodium phosphate, 4 mM DTT, 95% H2O/5% D2O' '95% H2O/5% D2O' S3_H2O solution ? 2 '300 uM [U-99% 13C; U-99% 15N] eEF2K_627-725, 50 mM sodium phosphate, 4 mM DTT, 100% D2O' '100% D2O' S3_D2O solution ? 3 '300 uM [U-99% 13C; U-99% 1 eEF2K_627-725, 15 mg/mL Pf1 phage (ASLA Ltd), 50 mM sodium phosphate, 4 mM DTT, 90% H2O/10% D2O' '90% H2O/10% D2O' S3_RDC 'filamentous virus' ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 INOVA ? Varian 600 ? 2 AVANCE ? Bruker 600 ? 3 'AVANCE III' ? Bruker 700 ? 4 AVANCE ? Bruker 800 ? 5 'AVANCE III' ? Bruker 600 ? # _pdbx_nmr_refine.entry_id 5KS5 _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 6 # _pdbx_nmr_ensemble.entry_id 5KS5 _pdbx_nmr_ensemble.conformers_calculated_total_number 400 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5KS5 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 5 'data analysis' NMRView ? 'Johnson, One Moon Scientific' 6 refinement ARIA ? ;Linge, O'Donoghue and Nilges ; 3 'chemical shift assignment' NMRView ? 'Johnson, One Moon Scientific' 4 'peak picking' NMRView ? 'Johnson, One Moon Scientific' 7 'data analysis' TALOS ? 'Cornilescu, Delaglio and Bax' 8 'data analysis' ProcheckNMR ? 'Laskowski and MacArthur' 9 'data analysis' 'WHAT IF' ? Vriend # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5KS5 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5KS5 _struct.title 'Structure of the C-terminal Helical Repeat Domain of Elongation Factor 2 Kinase' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5KS5 _struct_keywords.text 'TRANSFERASE, eEF2K, SEL1, elongation, TPR' _struct_keywords.pdbx_keywords TRANSFERASE # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLN A 10 ? TYR A 19 ? GLN A 632 TYR A 641 1 ? 10 HELX_P HELX_P2 AA2 PRO A 41 ? THR A 55 ? PRO A 663 THR A 677 1 ? 15 HELX_P HELX_P3 AA3 ASP A 63 ? ALA A 81 ? ASP A 685 ALA A 703 1 ? 19 HELX_P HELX_P4 AA4 LYS A 83 ? GLN A 100 ? LYS A 705 GLN A 722 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 5KS5 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 623 623 GLY GLY A . n A 1 2 SER 2 624 624 SER SER A . n A 1 3 HIS 3 625 625 HIS HIS A . n A 1 4 MET 4 626 626 MET MET A . n A 1 5 SER 5 627 627 SER SER A . n A 1 6 PRO 6 628 628 PRO PRO A . n A 1 7 ASP 7 629 629 ASP ASP A . n A 1 8 ARG 8 630 630 ARG ARG A . n A 1 9 CYS 9 631 631 CYS CYS A . n A 1 10 GLN 10 632 632 GLN GLN A . n A 1 11 ASP 11 633 633 ASP ASP A . n A 1 12 TRP 12 634 634 TRP TRP A . n A 1 13 LEU 13 635 635 LEU LEU A . n A 1 14 GLU 14 636 636 GLU GLU A . n A 1 15 ALA 15 637 637 ALA ALA A . n A 1 16 LEU 16 638 638 LEU LEU A . n A 1 17 HIS 17 639 639 HIS HIS A . n A 1 18 TRP 18 640 640 TRP TRP A . n A 1 19 TYR 19 641 641 TYR TYR A . n A 1 20 ASN 20 642 642 ASN ASN A . n A 1 21 THR 21 643 643 THR THR A . n A 1 22 ALA 22 644 644 ALA ALA A . n A 1 23 LEU 23 645 645 LEU LEU A . n A 1 24 GLU 24 646 646 GLU GLU A . n A 1 25 MET 25 647 647 MET MET A . n A 1 26 THR 26 648 648 THR THR A . n A 1 27 ASP 27 649 649 ASP ASP A . n A 1 28 CYS 28 650 650 CYS CYS A . n A 1 29 ASP 29 651 651 ASP ASP A . n A 1 30 GLU 30 652 652 GLU GLU A . n A 1 31 GLY 31 653 653 GLY GLY A . n A 1 32 GLY 32 654 654 GLY GLY A . n A 1 33 GLU 33 655 655 GLU GLU A . n A 1 34 TYR 34 656 656 TYR TYR A . n A 1 35 ASP 35 657 657 ASP ASP A . n A 1 36 GLY 36 658 658 GLY GLY A . n A 1 37 MET 37 659 659 MET MET A . n A 1 38 GLN 38 660 660 GLN GLN A . n A 1 39 ASP 39 661 661 ASP ASP A . n A 1 40 GLU 40 662 662 GLU GLU A . n A 1 41 PRO 41 663 663 PRO PRO A . n A 1 42 ARG 42 664 664 ARG ARG A . n A 1 43 TYR 43 665 665 TYR TYR A . n A 1 44 MET 44 666 666 MET MET A . n A 1 45 MET 45 667 667 MET MET A . n A 1 46 LEU 46 668 668 LEU LEU A . n A 1 47 ALA 47 669 669 ALA ALA A . n A 1 48 ARG 48 670 670 ARG ARG A . n A 1 49 GLU 49 671 671 GLU GLU A . n A 1 50 ALA 50 672 672 ALA ALA A . n A 1 51 GLU 51 673 673 GLU GLU A . n A 1 52 MET 52 674 674 MET MET A . n A 1 53 LEU 53 675 675 LEU LEU A . n A 1 54 PHE 54 676 676 PHE PHE A . n A 1 55 THR 55 677 677 THR THR A . n A 1 56 GLY 56 678 678 GLY GLY A . n A 1 57 GLY 57 679 679 GLY GLY A . n A 1 58 TYR 58 680 680 TYR TYR A . n A 1 59 GLY 59 681 681 GLY GLY A . n A 1 60 LEU 60 682 682 LEU LEU A . n A 1 61 GLU 61 683 683 GLU GLU A . n A 1 62 LYS 62 684 684 LYS LYS A . n A 1 63 ASP 63 685 685 ASP ASP A . n A 1 64 PRO 64 686 686 PRO PRO A . n A 1 65 GLN 65 687 687 GLN GLN A . n A 1 66 ARG 66 688 688 ARG ARG A . n A 1 67 SER 67 689 689 SER SER A . n A 1 68 GLY 68 690 690 GLY GLY A . n A 1 69 ASP 69 691 691 ASP ASP A . n A 1 70 LEU 70 692 692 LEU LEU A . n A 1 71 TYR 71 693 693 TYR TYR A . n A 1 72 THR 72 694 694 THR THR A . n A 1 73 GLN 73 695 695 GLN GLN A . n A 1 74 ALA 74 696 696 ALA ALA A . n A 1 75 ALA 75 697 697 ALA ALA A . n A 1 76 GLU 76 698 698 GLU GLU A . n A 1 77 ALA 77 699 699 ALA ALA A . n A 1 78 ALA 78 700 700 ALA ALA A . n A 1 79 MET 79 701 701 MET MET A . n A 1 80 GLU 80 702 702 GLU GLU A . n A 1 81 ALA 81 703 703 ALA ALA A . n A 1 82 MET 82 704 704 MET MET A . n A 1 83 LYS 83 705 705 LYS LYS A . n A 1 84 GLY 84 706 706 GLY GLY A . n A 1 85 ARG 85 707 707 ARG ARG A . n A 1 86 LEU 86 708 708 LEU LEU A . n A 1 87 ALA 87 709 709 ALA ALA A . n A 1 88 ASN 88 710 710 ASN ASN A . n A 1 89 GLN 89 711 711 GLN GLN A . n A 1 90 TYR 90 712 712 TYR TYR A . n A 1 91 TYR 91 713 713 TYR TYR A . n A 1 92 GLN 92 714 714 GLN GLN A . n A 1 93 LYS 93 715 715 LYS LYS A . n A 1 94 ALA 94 716 716 ALA ALA A . n A 1 95 GLU 95 717 717 GLU GLU A . n A 1 96 GLU 96 718 718 GLU GLU A . n A 1 97 ALA 97 719 719 ALA ALA A . n A 1 98 TRP 98 720 720 TRP TRP A . n A 1 99 ALA 99 721 721 ALA ALA A . n A 1 100 GLN 100 722 722 GLN GLN A . n A 1 101 MET 101 723 723 MET MET A . n A 1 102 GLU 102 724 724 GLU GLU A . n A 1 103 GLU 103 725 725 GLU GLU A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 6870 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-09-14 2 'Structure model' 1 1 2016-10-12 3 'Structure model' 1 2 2017-09-27 4 'Structure model' 1 3 2018-01-17 5 'Structure model' 1 4 2019-12-25 6 'Structure model' 1 5 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Structure summary' 5 4 'Structure model' 'Author supporting evidence' 6 5 'Structure model' 'Author supporting evidence' 7 5 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' 9 6 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 3 'Structure model' entity 3 3 'Structure model' pdbx_audit_support 4 4 'Structure model' pdbx_audit_support 5 5 'Structure model' pdbx_audit_support 6 5 'Structure model' pdbx_nmr_software 7 5 'Structure model' pdbx_nmr_spectrometer 8 6 'Structure model' database_2 9 6 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.journal_id_CSD' 2 3 'Structure model' '_entity.pdbx_number_of_molecules' 3 3 'Structure model' '_pdbx_audit_support.funding_organization' 4 4 'Structure model' '_pdbx_audit_support.funding_organization' 5 5 'Structure model' '_pdbx_audit_support.funding_organization' 6 5 'Structure model' '_pdbx_nmr_software.name' 7 5 'Structure model' '_pdbx_nmr_spectrometer.model' 8 6 'Structure model' '_database_2.pdbx_DOI' 9 6 'Structure model' '_database_2.pdbx_database_accession' 10 6 'Structure model' '_pdbx_database_status.status_code_nmr_data' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 eEF2K_627-725 600 ? uM '[U-99% 13C; U-99% 15N]' 1 'sodium phosphate' 50 ? mM 'natural abundance' 1 DTT 4 ? mM 'natural abundance' 2 eEF2K_627-725 300 ? uM '[U-99% 13C; U-99% 15N]' 2 'sodium phosphate' 50 ? mM 'natural abundance' 2 DTT 4 ? mM 'natural abundance' 3 eEF2K_627-725 300 ? uM '[U-99% 13C; U-99% 1' 3 'Pf1 phage (ASLA Ltd)' 15 ? mg/mL 'natural abundance' 3 'sodium phosphate' 50 ? mM 'natural abundance' 3 DTT 4 ? mM 'natural abundance' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 3 HZ3 A LYS 684 ? ? OXT A GLU 725 ? ? 1.59 2 6 HZ2 A LYS 715 ? ? OE2 A GLU 718 ? ? 1.58 3 10 OE2 A GLU 646 ? ? HH22 A ARG 707 ? ? 1.58 4 16 HZ1 A LYS 715 ? ? OE2 A GLU 718 ? ? 1.58 5 19 HZ3 A LYS 684 ? ? OE1 A GLU 725 ? ? 1.55 6 20 HH A TYR 641 ? ? HG1 A THR 643 ? ? 1.11 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 630 ? ? -91.87 47.37 2 1 TYR A 641 ? ? 67.43 171.08 3 1 ALA A 644 ? ? 68.64 -59.92 4 1 THR A 648 ? ? -118.66 -169.19 5 1 ASP A 657 ? ? -171.13 117.54 6 1 GLN A 660 ? ? -97.78 48.98 7 2 SER A 624 ? ? -158.17 -40.65 8 2 GLN A 632 ? ? -133.57 -55.87 9 2 ASN A 642 ? ? -100.45 60.31 10 2 ALA A 644 ? ? 71.09 -58.93 11 2 ASP A 649 ? ? -109.80 64.07 12 2 GLN A 660 ? ? -98.31 49.74 13 2 LYS A 705 ? ? -106.33 74.08 14 2 MET A 723 ? ? -66.91 62.26 15 2 GLU A 724 ? ? -152.57 31.63 16 3 MET A 626 ? ? 70.74 130.76 17 3 ARG A 630 ? ? -96.41 50.63 18 3 TYR A 641 ? ? -69.28 70.97 19 3 ASN A 642 ? ? -100.85 58.67 20 3 ASP A 649 ? ? -103.58 76.28 21 3 CYS A 650 ? ? -146.46 23.02 22 3 TYR A 680 ? ? -67.76 92.94 23 3 MET A 723 ? ? 63.55 -63.90 24 4 ARG A 630 ? ? -90.43 43.19 25 4 CYS A 631 ? ? -79.34 47.40 26 4 GLN A 632 ? ? -131.45 -33.51 27 4 ALA A 644 ? ? 72.66 -27.80 28 4 MET A 704 ? ? 69.47 -2.84 29 4 GLU A 724 ? ? -169.21 77.34 30 5 ARG A 630 ? ? -82.76 43.42 31 5 ASP A 661 ? ? 72.31 146.81 32 5 MET A 723 ? ? 35.48 44.78 33 5 GLU A 724 ? ? -164.58 76.97 34 6 TYR A 641 ? ? 58.70 -170.20 35 6 ASN A 642 ? ? 59.49 75.17 36 6 THR A 643 ? ? -147.11 58.76 37 6 ASP A 657 ? ? -131.25 -67.82 38 6 MET A 659 ? ? -60.31 89.57 39 6 ASP A 661 ? ? -104.41 -91.08 40 6 LYS A 705 ? ? -112.51 65.14 41 7 HIS A 625 ? ? -144.39 -44.91 42 7 GLN A 632 ? ? -135.04 -77.34 43 7 ASN A 642 ? ? -80.32 49.04 44 7 ALA A 644 ? ? -90.60 -60.40 45 7 THR A 648 ? ? -66.75 95.88 46 7 ASP A 649 ? ? -108.64 54.64 47 7 GLU A 662 ? ? -58.35 107.89 48 7 LYS A 705 ? ? -102.07 76.25 49 7 MET A 723 ? ? 30.54 55.38 50 7 GLU A 724 ? ? -144.13 -1.23 51 8 SER A 624 ? ? -92.32 50.21 52 8 HIS A 625 ? ? 72.52 -52.17 53 8 TYR A 641 ? ? 71.18 159.83 54 8 THR A 643 ? ? -90.59 59.82 55 8 ALA A 644 ? ? -81.16 -72.35 56 8 ASP A 657 ? ? -79.62 40.46 57 8 MET A 659 ? ? 67.32 102.14 58 8 GLU A 724 ? ? -152.81 62.43 59 9 PRO A 628 ? ? -68.16 69.29 60 9 ASN A 642 ? ? -154.12 80.56 61 9 THR A 643 ? ? -175.75 111.81 62 9 CYS A 650 ? ? 65.73 125.57 63 9 GLU A 655 ? ? 54.15 70.27 64 9 ASP A 661 ? ? 72.69 -59.77 65 10 MET A 626 ? ? 69.17 -34.09 66 10 CYS A 631 ? ? -116.16 52.36 67 10 ASN A 642 ? ? -153.09 84.55 68 10 THR A 648 ? ? -69.14 97.47 69 10 LYS A 705 ? ? -101.52 57.73 70 11 TYR A 641 ? ? -90.99 35.25 71 11 LEU A 645 ? ? -105.33 -167.87 72 11 GLU A 646 ? ? 62.84 62.31 73 11 TYR A 656 ? ? 66.31 124.51 74 11 ASP A 661 ? ? 71.03 -40.59 75 11 MET A 723 ? ? 38.69 45.27 76 12 HIS A 625 ? ? -84.58 38.67 77 12 MET A 626 ? ? 63.44 66.72 78 12 ARG A 630 ? ? -104.62 70.13 79 12 CYS A 631 ? ? -102.86 51.39 80 12 ASN A 642 ? ? -166.94 87.04 81 12 THR A 643 ? ? -107.18 -75.91 82 12 ALA A 644 ? ? 71.26 -55.90 83 12 ASP A 649 ? ? -97.56 32.97 84 12 ASP A 661 ? ? -67.94 -70.70 85 12 LYS A 705 ? ? -113.98 72.17 86 13 MET A 626 ? ? 67.27 77.29 87 13 ALA A 644 ? ? -121.22 -69.45 88 13 CYS A 650 ? ? -90.59 30.81 89 13 GLU A 652 ? ? -93.15 40.64 90 13 GLU A 655 ? ? 57.23 84.05 91 13 TYR A 656 ? ? -100.07 79.50 92 13 MET A 659 ? ? 53.37 85.26 93 13 ASP A 661 ? ? 64.92 -75.74 94 13 TYR A 680 ? ? -67.79 92.86 95 13 LYS A 705 ? ? -119.62 78.12 96 14 MET A 626 ? ? -152.55 70.55 97 14 PRO A 628 ? ? -83.09 49.75 98 14 CYS A 631 ? ? -146.59 51.66 99 14 ASN A 642 ? ? -161.70 101.10 100 14 LEU A 645 ? ? 62.73 91.59 101 14 MET A 647 ? ? -79.84 -70.44 102 14 ASP A 651 ? ? 60.41 73.83 103 14 GLU A 655 ? ? 57.75 76.68 104 14 TYR A 656 ? ? -161.58 40.61 105 14 MET A 659 ? ? 58.03 90.82 106 15 CYS A 631 ? ? -119.74 65.46 107 15 THR A 643 ? ? -98.06 -66.98 108 15 ALA A 644 ? ? -114.51 56.60 109 15 ASP A 649 ? ? -110.63 69.81 110 15 ASP A 651 ? ? -85.49 39.21 111 15 GLU A 655 ? ? -97.98 38.79 112 15 GLN A 660 ? ? -155.61 76.06 113 15 LYS A 705 ? ? -107.86 65.10 114 15 MET A 723 ? ? 61.75 -85.85 115 16 HIS A 625 ? ? -86.95 42.15 116 16 MET A 626 ? ? 61.67 93.93 117 16 TYR A 641 ? ? -62.01 92.83 118 16 GLU A 646 ? ? -105.77 73.57 119 16 MET A 647 ? ? -69.14 99.93 120 16 CYS A 650 ? ? -141.01 52.03 121 16 GLU A 655 ? ? 59.51 71.83 122 16 GLU A 724 ? ? -164.08 33.68 123 17 SER A 627 ? ? 61.92 68.79 124 17 THR A 643 ? ? -88.84 -83.61 125 17 ASP A 649 ? ? -79.57 48.84 126 17 ASP A 651 ? ? 59.77 91.86 127 17 GLU A 652 ? ? -95.36 43.32 128 17 MET A 659 ? ? -112.67 77.88 129 17 ASP A 661 ? ? -167.92 -38.29 130 17 LYS A 705 ? ? -113.33 72.61 131 17 MET A 723 ? ? -52.15 95.18 132 17 GLU A 724 ? ? -175.84 -161.94 133 18 HIS A 625 ? ? 65.14 102.39 134 18 GLN A 632 ? ? -150.82 -39.18 135 18 THR A 643 ? ? -91.31 55.50 136 18 ALA A 644 ? ? 69.86 -20.03 137 18 ASP A 651 ? ? -160.25 107.02 138 18 MET A 723 ? ? 28.03 53.58 139 19 SER A 624 ? ? 53.37 -93.56 140 19 MET A 626 ? ? -170.17 130.33 141 19 PRO A 628 ? ? -53.76 100.84 142 19 ARG A 630 ? ? -121.24 -56.58 143 19 CYS A 650 ? ? -110.22 54.60 144 19 ASP A 657 ? ? -166.85 -154.92 145 19 LYS A 705 ? ? -106.05 71.24 146 19 MET A 723 ? ? 34.59 51.69 147 19 GLU A 724 ? ? -149.13 39.16 148 20 ARG A 630 ? ? -140.44 40.32 149 20 ASN A 642 ? ? -160.33 87.25 150 20 ALA A 644 ? ? 70.20 -61.40 151 20 LEU A 645 ? ? -154.05 52.98 152 20 MET A 723 ? ? 24.21 51.50 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM084278 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM059802 2 'Welch Foundation' 'United States' F-1390 3 'United States Department of Education GAANN' 'United States' P200A120211 4 'Alfred P. Sloan Foundation' 'United States' 2014-6-25 5 #