HEADER TRANSFERASE 11-JUL-16 5KTC TITLE FDHC WITH BOUND PRODUCTS: COENZYME A AND 3-[(R)-3- TITLE 2 HYDROXYBUTANOYLAMINO]-3,6-DIDEOXY-D-GALACTOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FDHC; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER NOSOCOMIALIS; SOURCE 3 ORGANISM_TAXID: 106654; SOURCE 4 GENE: FDHC; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GNAT, SUGAR, O-ANTIGEN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.J.SALINGER,J.B.THODEN,H.M.HOLDEN REVDAT 5 04-OCT-23 5KTC 1 LINK REVDAT 4 25-DEC-19 5KTC 1 REMARK REVDAT 3 27-SEP-17 5KTC 1 JRNL REMARK REVDAT 2 07-SEP-16 5KTC 1 JRNL REVDAT 1 27-JUL-16 5KTC 0 JRNL AUTH A.J.SALINGER,J.B.THODEN,H.M.HOLDEN JRNL TITL STRUCTURAL AND FUNCTIONAL INVESTIGATION OF FDHC FROM JRNL TITL 2 ACINETOBACTER NOSOCOMIALIS: A SUGAR N-ACYLTRANSFERASE JRNL TITL 3 BELONGING TO THE GNAT SUPERFAMILY. JRNL REF BIOCHEMISTRY V. 55 4509 2016 JRNL REFN ISSN 0006-2960 JRNL PMID 27404806 JRNL DOI 10.1021/ACS.BIOCHEM.6B00602 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 19260 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1043 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1249 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.35 REMARK 3 BIN R VALUE (WORKING SET) : 0.3110 REMARK 3 BIN FREE R VALUE SET COUNT : 55 REMARK 3 BIN FREE R VALUE : 0.3350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1570 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 94 REMARK 3 SOLVENT ATOMS : 148 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.82000 REMARK 3 B22 (A**2) : 0.82000 REMARK 3 B33 (A**2) : -1.63000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.140 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.140 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.105 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.583 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1725 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1538 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2340 ; 2.038 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3549 ; 1.066 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 190 ; 7.509 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 94 ;37.961 ;24.362 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 285 ;15.209 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;17.593 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 235 ; 0.124 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1909 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 438 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 751 ; 1.861 ; 1.875 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 750 ; 1.858 ; 1.876 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 938 ; 2.857 ; 2.801 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 939 ; 2.858 ; 2.800 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 974 ; 2.688 ; 2.125 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 975 ; 2.687 ; 2.125 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1401 ; 4.137 ; 3.084 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2096 ; 5.598 ;15.750 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2097 ; 5.596 ;15.753 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5KTC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1000222716. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAY-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER PLATINUM 135 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SAINT 7.06A REMARK 200 DATA SCALING SOFTWARE : SADABS 2005/1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20344 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5KTA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% MONOMETHYLETHER POLY(ETHYLENE REMARK 280 GLYCOL) 5000, 200 MM LICL, AND 100 MM HOMO-PIPES, PH 5.0, BATCH REMARK 280 MODE, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.73500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.13400 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.13400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 18.36750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.13400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.13400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 55.10250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.13400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.13400 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 18.36750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.13400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.13400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 55.10250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 36.73500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 410 O HOH A 410 8554 1.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 52 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG A 81 NE - CZ - NH1 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG A 81 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ILE A 151 CB - CA - C ANGL. DEV. = -13.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 8 -160.68 -121.94 REMARK 500 GLU A 63 136.84 -171.76 REMARK 500 SER A 152 -151.42 -171.79 REMARK 500 GLU A 153 174.24 178.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 204 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE A 4 O REMARK 620 2 ASN A 5 OD1 75.9 REMARK 620 3 ASP A 72 O 127.9 114.5 REMARK 620 4 HOH A 320 O 76.5 91.0 147.1 REMARK 620 5 HOH A 356 O 84.8 156.2 67.2 98.0 REMARK 620 6 HOH A 420 O 98.2 82.0 40.6 172.2 87.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FUH A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue COA A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5KTA RELATED DB: PDB REMARK 900 RELATED ID: 5KTD RELATED DB: PDB DBREF 5KTC A 1 180 UNP V5RDR9 V5RDR9_9GAMM 1 180 SEQADV 5KTC LEU A 181 UNP V5RDR9 EXPRESSION TAG SEQADV 5KTC GLU A 182 UNP V5RDR9 EXPRESSION TAG SEQADV 5KTC HIS A 183 UNP V5RDR9 EXPRESSION TAG SEQADV 5KTC HIS A 184 UNP V5RDR9 EXPRESSION TAG SEQADV 5KTC HIS A 185 UNP V5RDR9 EXPRESSION TAG SEQADV 5KTC HIS A 186 UNP V5RDR9 EXPRESSION TAG SEQADV 5KTC HIS A 187 UNP V5RDR9 EXPRESSION TAG SEQADV 5KTC HIS A 188 UNP V5RDR9 EXPRESSION TAG SEQRES 1 A 188 MET VAL ASN PHE ASN LEU LYS ALA ASN THR THR TYR LEU SEQRES 2 A 188 ARG LEU VAL GLU GLU ASN ASP ALA GLU PHE ILE CYS THR SEQRES 3 A 188 LEU ARG ASN ASN ASP LYS LEU ASN THR TYR ILE SER LYS SEQRES 4 A 188 SER THR GLY ASP ILE LYS SER GLN ALA GLU TRP ILE ARG SEQRES 5 A 188 ASN TYR LYS ASN ARG GLU ASN ASN GLY GLU GLU TYR TYR SEQRES 6 A 188 PHE ILE ILE PHE ARG SER ASP ASP GLN SER PRO ILE GLY SEQRES 7 A 188 THR VAL ARG LEU TYR ASP PHE HIS GLU ASN PRO LYS SER SEQRES 8 A 188 PHE CYS TRP GLY SER TRP ILE LEU ASN GLU HIS LYS THR SEQRES 9 A 188 LYS TYR ALA ALA VAL GLU SER ALA LEU LEU VAL TYR GLU SEQRES 10 A 188 ALA GLY PHE SER THR LEU GLY PHE GLU GLN SER HIS PHE SEQRES 11 A 188 GLU VAL MET LYS GLY ASN ASP LYS VAL HIS SER PHE HIS SEQRES 12 A 188 LEU LYS MET GLY ALA GLN LYS ILE SER GLU ASP ASP GLU SEQRES 13 A 188 ASN ILE TYR TYR ILE PHE PRO LYS SER LYS TYR LYS GLU SEQRES 14 A 188 ASN LYS ILE GLN TYR ALA ARG PHE LEU GLY LYS LEU GLU SEQRES 15 A 188 HIS HIS HIS HIS HIS HIS HET EDO A 201 4 HET FUH A 202 41 HET COA A 203 48 HET MG A 204 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM FUH [[(2~{R},3~{S},5~{R})-5-[5-METHYL-2,4- HETNAM 2 FUH BIS(OXIDANYLIDENE)PYRIMIDIN-1-YL]-3-OXIDANYL-OXOLAN-2- HETNAM 3 FUH YL]METHOXY-OXIDANYL-PHOSPHORYL] [(2~{R},3~{R},4~{S}, HETNAM 4 FUH 5~{R},6~{R})-6-METHYL-3,5-BIS(OXIDANYL)-4-[[(3~{R})-3- HETNAM 5 FUH OXIDANYLBUTANOYL]AMINO]OXAN-2-YL] HYDROGEN PHOSPHATE HETNAM COA COENZYME A HETNAM MG MAGNESIUM ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO C2 H6 O2 FORMUL 3 FUH C20 H33 N3 O16 P2 FORMUL 4 COA C21 H36 N7 O16 P3 S FORMUL 5 MG MG 2+ FORMUL 6 HOH *148(H2 O) HELIX 1 AA1 GLU A 17 ASN A 19 5 3 HELIX 2 AA2 ASP A 20 ASN A 29 1 10 HELIX 3 AA3 ASP A 43 ASN A 60 1 18 HELIX 4 AA4 TYR A 106 SER A 121 1 16 HELIX 5 AA5 ASN A 136 GLY A 147 1 12 HELIX 6 AA6 LYS A 164 TYR A 174 1 11 HELIX 7 AA7 TYR A 174 GLY A 179 1 6 SHEET 1 AA1 7 THR A 11 LEU A 15 0 SHEET 2 AA1 7 GLU A 63 ARG A 70 -1 O PHE A 69 N TYR A 12 SHEET 3 AA1 7 SER A 75 HIS A 86 -1 O ILE A 77 N ILE A 68 SHEET 4 AA1 7 SER A 91 LEU A 99 -1 O CYS A 93 N TYR A 83 SHEET 5 AA1 7 GLN A 127 MET A 133 1 O HIS A 129 N PHE A 92 SHEET 6 AA1 7 ASN A 157 PRO A 163 -1 O TYR A 160 N PHE A 130 SHEET 7 AA1 7 GLN A 149 GLU A 153 -1 N GLN A 149 O ILE A 161 LINK O PHE A 4 MG MG A 204 1555 1555 2.39 LINK OD1 ASN A 5 MG MG A 204 1555 1555 2.75 LINK O ASP A 72 MG MG A 204 1555 8554 2.26 LINK MG MG A 204 O HOH A 320 1555 1555 2.33 LINK MG MG A 204 O HOH A 356 1555 8554 2.49 LINK MG MG A 204 O HOH A 420 1555 8554 2.25 CISPEP 1 ASN A 88 PRO A 89 0 8.88 SITE 1 AC1 6 ARG A 14 ASP A 20 PHE A 23 HOH A 401 SITE 2 AC1 6 HOH A 403 HOH A 410 SITE 1 AC2 26 ILE A 24 ARG A 28 TYR A 36 ILE A 37 SITE 2 AC2 26 SER A 38 LYS A 39 SER A 40 GLN A 47 SITE 3 AC2 26 TRP A 50 TYR A 65 ARG A 81 TYR A 83 SITE 4 AC2 26 TRP A 94 GLY A 95 SER A 96 TRP A 97 SITE 5 AC2 26 GLU A 131 HIS A 143 HIS A 184 COA A 203 SITE 6 AC2 26 HOH A 302 HOH A 318 HOH A 319 HOH A 361 SITE 7 AC2 26 HOH A 364 HOH A 371 SITE 1 AC3 23 LEU A 33 TRP A 97 ILE A 98 LEU A 99 SITE 2 AC3 23 LYS A 103 LYS A 105 TYR A 106 ALA A 108 SITE 3 AC3 23 VAL A 109 ASN A 136 LYS A 138 PHE A 142 SITE 4 AC3 23 LYS A 145 TYR A 174 FUH A 202 HOH A 317 SITE 5 AC3 23 HOH A 321 HOH A 335 HOH A 339 HOH A 345 SITE 6 AC3 23 HOH A 373 HOH A 378 HOH A 389 SITE 1 AC4 6 PHE A 4 ASN A 5 ASP A 72 HOH A 320 SITE 2 AC4 6 HOH A 356 HOH A 420 CRYST1 76.268 76.268 73.470 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013112 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013112 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013611 0.00000