HEADER SIGNALING PROTEIN 11-JUL-16 5KTF TITLE STRUCTURE OF THE C-TERMINAL TRANSMEMBRANE DOMAIN OF SCAVENGER RECEPTOR TITLE 2 BI (SR-BI) COMPND MOL_ID: 1; COMPND 2 MOLECULE: SCAVENGER RECEPTOR CLASS B MEMBER 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SRB1,SR-BI; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: SCARB1, SRB1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-[PREP4]; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE30-SMT KEYWDS SR-BI, TRANSMEMBRANE DOMAIN, CHOLESTEROL, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.C.CHADWICK,F.C.PETERSON,B.F.VOLKMAN,D.SAHOO REVDAT 5 14-JUN-23 5KTF 1 REMARK REVDAT 4 04-DEC-19 5KTF 1 REMARK REVDAT 3 20-SEP-17 5KTF 1 REMARK REVDAT 2 22-MAR-17 5KTF 1 JRNL REVDAT 1 08-MAR-17 5KTF 0 JRNL AUTH A.C.CHADWICK,D.R.JENSEN,P.J.HANSON,P.T.LANGE,S.C.PROUDFOOT, JRNL AUTH 2 F.C.PETERSON,B.F.VOLKMAN,D.SAHOO JRNL TITL NMR STRUCTURE OF THE C-TERMINAL TRANSMEMBRANE DOMAIN OF THE JRNL TITL 2 HDL RECEPTOR, SR-BI, AND A FUNCTIONALLY RELEVANT LEUCINE JRNL TITL 3 ZIPPER MOTIF. JRNL REF STRUCTURE V. 25 446 2017 JRNL REFN ISSN 1878-4186 JRNL PMID 28162952 JRNL DOI 10.1016/J.STR.2017.01.001 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5KTF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1000222663. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 313 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-99% 13C; U-99% 15N] REMARK 210 SCAVENGER RECEPTOR BI (SR-BI), REMARK 210 5.0 W/V [U-2H] LPPG, 0.02 W/V REMARK 210 SODIUM AZIDE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, XEASY, TOPSPIN, NMRPIPE, REMARK 210 X-PLOR NIH REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 469 98.49 54.45 REMARK 500 1 PHE A 471 -43.09 -133.97 REMARK 500 2 PHE A 471 -172.97 62.19 REMARK 500 2 TRP A 474 101.56 67.61 REMARK 500 3 PRO A 426 29.97 -73.11 REMARK 500 3 LYS A 469 -64.12 70.68 REMARK 500 3 PHE A 471 93.00 57.02 REMARK 500 3 PHE A 473 -34.21 77.18 REMARK 500 4 LYS A 469 107.05 64.76 REMARK 500 4 PHE A 473 76.52 66.51 REMARK 500 4 TRP A 474 -46.87 -158.20 REMARK 500 5 LYS A 469 175.98 62.10 REMARK 500 6 PRO A 408 9.90 -66.12 REMARK 500 6 LYS A 425 113.19 59.01 REMARK 500 6 PRO A 426 24.93 -73.56 REMARK 500 6 PHE A 471 -175.57 -64.34 REMARK 500 6 PHE A 473 77.68 58.44 REMARK 500 8 PRO A 438 -28.18 -38.93 REMARK 500 8 PHE A 473 78.53 -156.26 REMARK 500 9 SER A 404 -21.42 73.00 REMARK 500 9 PHE A 471 88.24 54.26 REMARK 500 10 PRO A 438 -34.49 -36.64 REMARK 500 10 LYS A 469 96.55 -68.05 REMARK 500 10 PHE A 473 81.13 -174.19 REMARK 500 10 TRP A 474 -54.51 -138.03 REMARK 500 11 PHE A 471 139.56 71.26 REMARK 500 11 PHE A 473 -83.24 -93.09 REMARK 500 12 PRO A 426 -169.82 -74.68 REMARK 500 12 LYS A 469 108.75 69.36 REMARK 500 12 PHE A 473 82.30 69.46 REMARK 500 13 PRO A 426 81.35 -54.95 REMARK 500 13 LYS A 469 160.35 69.65 REMARK 500 13 PHE A 473 -32.21 -159.28 REMARK 500 14 PRO A 426 91.23 -68.15 REMARK 500 14 LYS A 469 107.99 66.47 REMARK 500 14 TRP A 474 91.15 55.29 REMARK 500 15 PRO A 426 158.26 -47.70 REMARK 500 15 PHE A 473 -37.13 82.21 REMARK 500 16 PHE A 473 81.46 85.01 REMARK 500 17 LYS A 425 78.17 63.05 REMARK 500 17 PHE A 471 74.34 -152.35 REMARK 500 17 PHE A 473 -34.07 -142.71 REMARK 500 17 TRP A 474 -34.43 -162.24 REMARK 500 18 LYS A 469 168.95 68.00 REMARK 500 18 TRP A 474 95.76 58.78 REMARK 500 19 PRO A 426 47.62 -70.68 REMARK 500 20 LYS A 469 -173.12 66.98 REMARK 500 20 PHE A 473 -1.63 82.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30137 RELATED DB: BMRB DBREF 5KTF A 405 475 UNP Q61009 SCRB1_MOUSE 405 475 SEQADV 5KTF GLY A 403 UNP Q61009 EXPRESSION TAG SEQADV 5KTF SER A 404 UNP Q61009 EXPRESSION TAG SEQRES 1 A 73 GLY SER LYS ILE GLU PRO VAL VAL LEU PRO LEU LEU TRP SEQRES 2 A 73 PHE GLU GLN SER GLY ALA MET GLY GLY LYS PRO LEU SER SEQRES 3 A 73 THR PHE TYR THR GLN LEU VAL LEU MET PRO GLN VAL LEU SEQRES 4 A 73 HIS TYR ALA GLN TYR VAL LEU LEU GLY LEU GLY GLY LEU SEQRES 5 A 73 LEU LEU LEU VAL PRO ILE ILE CYS GLN LEU ARG SER GLN SEQRES 6 A 73 GLU LYS CYS PHE LEU PHE TRP SER HELIX 1 AA1 ILE A 406 GLN A 418 1 13 HELIX 2 AA2 PRO A 426 VAL A 435 1 10 HELIX 3 AA3 GLN A 439 LEU A 456 1 18 HELIX 4 AA4 LEU A 456 LYS A 469 1 14 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1