HEADER RNA 11-JUL-16 5KTJ TITLE CRYSTAL STRUCTURE OF PISTOL, A CLASS OF SELF-CLEAVING RIBOZYME COMPND MOL_ID: 1; COMPND 2 MOLECULE: PISTOL (50-MER); COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: RNA (5'-R(*UP*CP*UP*GP*CP*UP*CP*UP*CP*GP*UP*CP*CP*AP*A)- COMPND 8 3'); COMPND 9 CHAIN: B, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METAGENOME; SOURCE 3 ORGANISM_TAXID: 256318; SOURCE 4 EXPRESSION_SYSTEM: METAGENOME; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 256318; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: METAGENOME; SOURCE 8 ORGANISM_TAXID: 256318; SOURCE 9 EXPRESSION_SYSTEM: METAGENOME; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 256318 KEYWDS RIBOZYME, SELF-CLEAVAGE, INTERNAL TRANSESTERIFICATION, RNA EXPDTA X-RAY DIFFRACTION AUTHOR L.A.NGUYEN,J.WANG,T.A.STEITZ REVDAT 6 06-MAR-24 5KTJ 1 LINK REVDAT 5 20-NOV-19 5KTJ 1 REMARK REVDAT 4 15-FEB-17 5KTJ 1 JRNL REVDAT 3 01-FEB-17 5KTJ 1 TITLE JRNL REVDAT 2 18-JAN-17 5KTJ 1 JRNL REVDAT 1 05-OCT-16 5KTJ 0 JRNL AUTH L.A.NGUYEN,J.WANG,T.A.STEITZ JRNL TITL CRYSTAL STRUCTURE OF PISTOL, A CLASS OF SELF-CLEAVING JRNL TITL 2 RIBOZYME. JRNL REF PROC. NATL. ACAD. SCI. V. 114 1021 2017 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 28096403 JRNL DOI 10.1073/PNAS.1611191114 REMARK 2 REMARK 2 RESOLUTION. 2.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 81.27 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 9769 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 523 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.97 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 703 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.3980 REMARK 3 BIN FREE R VALUE SET COUNT : 40 REMARK 3 BIN FREE R VALUE : 0.4460 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 2786 REMARK 3 HETEROGEN ATOMS : 99 REMARK 3 SOLVENT ATOMS : 81 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 123.5 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.73000 REMARK 3 B22 (A**2) : 0.73000 REMARK 3 B33 (A**2) : -1.47000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.429 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.374 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 39.314 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3238 ; 0.010 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 1463 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5163 ; 2.212 ; 1.418 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3461 ; 1.721 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 518 ; 0.135 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1542 ; 0.014 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 684 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3238 ; 7.065 ; 9.602 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3233 ; 7.056 ; 9.598 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5154 ;10.809 ;14.566 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4444 ;15.003 ;93.385 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4442 ;14.804 ;93.302 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 21 REMARK 3 ORIGIN FOR THE GROUP (A): 32.2200 57.8200 65.9450 REMARK 3 T TENSOR REMARK 3 T11: 0.4578 T22: 0.6259 REMARK 3 T33: 0.4094 T12: 0.0368 REMARK 3 T13: 0.0003 T23: -0.2533 REMARK 3 L TENSOR REMARK 3 L11: 1.8924 L22: 0.8926 REMARK 3 L33: 1.1430 L12: 1.0790 REMARK 3 L13: -0.8207 L23: -0.2290 REMARK 3 S TENSOR REMARK 3 S11: -0.0502 S12: 0.0851 S13: 0.2465 REMARK 3 S21: -0.0391 S22: -0.3256 S23: 0.4102 REMARK 3 S31: 0.1757 S32: -0.1284 S33: 0.3759 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 22 A 42 REMARK 3 RESIDUE RANGE : B 10 B 15 REMARK 3 ORIGIN FOR THE GROUP (A): 50.1100 61.3930 69.1170 REMARK 3 T TENSOR REMARK 3 T11: 0.4966 T22: 0.5107 REMARK 3 T33: 0.1216 T12: 0.0177 REMARK 3 T13: -0.0620 T23: -0.0287 REMARK 3 L TENSOR REMARK 3 L11: 2.3754 L22: 2.4013 REMARK 3 L33: 0.3670 L12: 0.1855 REMARK 3 L13: -0.5530 L23: -0.7126 REMARK 3 S TENSOR REMARK 3 S11: 0.0211 S12: -0.0398 S13: -0.0491 REMARK 3 S21: 0.1109 S22: -0.1364 S23: -0.1008 REMARK 3 S31: -0.0409 S32: 0.0483 S33: 0.1153 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 43 A 50 REMARK 3 RESIDUE RANGE : B 1 B 9 REMARK 3 ORIGIN FOR THE GROUP (A): 51.0490 75.2040 89.4480 REMARK 3 T TENSOR REMARK 3 T11: 0.7007 T22: 0.7451 REMARK 3 T33: 0.1919 T12: -0.0556 REMARK 3 T13: -0.1261 T23: -0.0868 REMARK 3 L TENSOR REMARK 3 L11: 0.1320 L22: 0.1186 REMARK 3 L33: 0.0317 L12: -0.0960 REMARK 3 L13: -0.0440 L23: 0.0436 REMARK 3 S TENSOR REMARK 3 S11: -0.0910 S12: 0.0400 S13: -0.1162 REMARK 3 S21: -0.0810 S22: 0.0707 S23: 0.1191 REMARK 3 S31: 0.0160 S32: 0.0229 S33: 0.0203 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 21 REMARK 3 ORIGIN FOR THE GROUP (A): 22.7460 48.1000 51.2330 REMARK 3 T TENSOR REMARK 3 T11: 0.5105 T22: 0.5566 REMARK 3 T33: 0.2061 T12: 0.0427 REMARK 3 T13: -0.1595 T23: -0.0916 REMARK 3 L TENSOR REMARK 3 L11: 2.6220 L22: 1.4377 REMARK 3 L33: 1.5966 L12: 0.2867 REMARK 3 L13: 0.4335 L23: 1.1932 REMARK 3 S TENSOR REMARK 3 S11: -0.4971 S12: -0.0411 S13: 0.5498 REMARK 3 S21: -0.1019 S22: 0.1446 S23: 0.3348 REMARK 3 S31: -0.1297 S32: 0.2997 S33: 0.3525 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 22 C 42 REMARK 3 RESIDUE RANGE : D 10 D 15 REMARK 3 ORIGIN FOR THE GROUP (A): 24.0740 31.0200 44.8590 REMARK 3 T TENSOR REMARK 3 T11: 0.4926 T22: 0.5653 REMARK 3 T33: 0.1253 T12: 0.0491 REMARK 3 T13: -0.0770 T23: -0.0270 REMARK 3 L TENSOR REMARK 3 L11: 0.2047 L22: 0.7618 REMARK 3 L33: 0.4698 L12: -0.0544 REMARK 3 L13: -0.1800 L23: 0.4374 REMARK 3 S TENSOR REMARK 3 S11: -0.1205 S12: -0.1281 S13: 0.0947 REMARK 3 S21: 0.0228 S22: 0.0888 S23: 0.0282 REMARK 3 S31: 0.0899 S32: 0.0998 S33: 0.0317 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 43 C 50 REMARK 3 RESIDUE RANGE : D 1 D 9 REMARK 3 ORIGIN FOR THE GROUP (A): 9.5960 31.5710 24.3570 REMARK 3 T TENSOR REMARK 3 T11: 0.5560 T22: 0.5774 REMARK 3 T33: 0.1393 T12: -0.0066 REMARK 3 T13: -0.0650 T23: 0.0610 REMARK 3 L TENSOR REMARK 3 L11: 0.2910 L22: 2.3986 REMARK 3 L33: 0.1603 L12: -0.2749 REMARK 3 L13: 0.0007 L23: -0.5547 REMARK 3 S TENSOR REMARK 3 S11: -0.0832 S12: 0.0619 S13: 0.0921 REMARK 3 S21: 0.0441 S22: 0.1937 S23: 0.2077 REMARK 3 S31: -0.0005 S32: -0.0855 S33: -0.1105 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5KTJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1000222725. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 77.15 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.8445, 1.0163,1.8450 REMARK 200 MONOCHROMATOR : CRYO-COOLED DOUBLE CRYSTAL REMARK 200 SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10205 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.971 REMARK 200 RESOLUTION RANGE LOW (A) : 81.270 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 17.36 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6% MPD, 0.02 M MAGNESIUM CHLORIDE, REMARK 280 0.02 M COBALT HEXAMMINE, 0.04 M SODIUM CACODYLATE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.59500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 42.59500 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 128.27000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 42.59500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 64.13500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 42.59500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 192.40500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 42.59500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 192.40500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.59500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 64.13500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 42.59500 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 42.59500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 128.27000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 42.59500 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 42.59500 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 128.27000 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 42.59500 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 192.40500 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 42.59500 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 64.13500 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 42.59500 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 64.13500 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 42.59500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 192.40500 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 42.59500 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 42.59500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 128.27000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -97.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 SM SM A 104 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 G B 10 O2' REMARK 470 G D 10 O2' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 204 O HOH C 206 2.09 REMARK 500 OP1 G C 45 O HOH C 201 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 C A 34 O3' U A 35 P -0.104 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 U A 6 O5' - P - OP1 ANGL. DEV. = -7.5 DEGREES REMARK 500 G A 9 O5' - P - OP1 ANGL. DEV. = -5.8 DEGREES REMARK 500 A A 17 C2' - C3' - O3' ANGL. DEV. = 10.3 DEGREES REMARK 500 A A 20 C2' - C3' - O3' ANGL. DEV. = 9.7 DEGREES REMARK 500 C A 22 C2' - C3' - O3' ANGL. DEV. = 12.2 DEGREES REMARK 500 G A 32 O5' - P - OP1 ANGL. DEV. = -5.5 DEGREES REMARK 500 C A 34 O5' - P - OP2 ANGL. DEV. = -5.8 DEGREES REMARK 500 C A 41 O5' - P - OP2 ANGL. DEV. = -5.5 DEGREES REMARK 500 A A 44 O5' - C5' - C4' ANGL. DEV. = -4.9 DEGREES REMARK 500 G A 45 O5' - P - OP1 ANGL. DEV. = 8.1 DEGREES REMARK 500 U B 3 O5' - P - OP1 ANGL. DEV. = 7.8 DEGREES REMARK 500 U B 3 O5' - P - OP2 ANGL. DEV. = -7.1 DEGREES REMARK 500 U C 6 O5' - P - OP1 ANGL. DEV. = -10.4 DEGREES REMARK 500 U C 6 O5' - P - OP2 ANGL. DEV. = 8.3 DEGREES REMARK 500 C C 22 C2' - C3' - O3' ANGL. DEV. = 12.2 DEGREES REMARK 500 G C 33 O5' - P - OP2 ANGL. DEV. = 8.1 DEGREES REMARK 500 U C 35 O5' - P - OP2 ANGL. DEV. = -10.2 DEGREES REMARK 500 C C 41 C2' - C3' - O3' ANGL. DEV. = 10.5 DEGREES REMARK 500 G C 47 C2' - C3' - O3' ANGL. DEV. = 10.0 DEGREES REMARK 500 C C 48 C2' - C3' - O3' ANGL. DEV. = 14.2 DEGREES REMARK 500 C D 9 O5' - P - OP2 ANGL. DEV. = -6.8 DEGREES REMARK 500 G D 10 O5' - C5' - C4' ANGL. DEV. = -5.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SM A 102 SM REMARK 620 N RES CSSEQI ATOM REMARK 620 1 C A 22 OP2 REMARK 620 2 C A 22 O3' 90.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SM A 101 SM REMARK 620 N RES CSSEQI ATOM REMARK 620 1 C A 41 OP2 REMARK 620 2 G A 42 OP2 87.2 REMARK 620 3 HOH A 205 O 76.3 163.3 REMARK 620 4 HOH A 212 O 151.1 116.3 80.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 115 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 210 O REMARK 620 2 HOH A 213 O 92.4 REMARK 620 3 HOH B 201 O 87.6 179.3 REMARK 620 4 HOH B 202 O 91.7 90.5 90.2 REMARK 620 5 HOH B 203 O 179.3 87.9 92.2 87.6 REMARK 620 6 HOH D 201 O 88.2 89.6 89.7 179.9 92.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 116 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 218 O REMARK 620 2 HOH A 226 O 90.3 REMARK 620 3 HOH A 228 O 89.5 88.0 REMARK 620 4 HOH A 229 O 90.0 92.2 179.5 REMARK 620 5 HOH B 207 O 89.9 179.7 91.9 87.9 REMARK 620 6 HOH B 208 O 179.6 90.0 90.7 89.8 89.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 117 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 201 O REMARK 620 2 HOH A 202 O 92.5 REMARK 620 3 HOH A 203 O 88.1 88.8 REMARK 620 4 HOH A 207 O 91.9 90.9 179.6 REMARK 620 5 HOH D 202 O 179.4 87.9 91.4 88.5 REMARK 620 6 HOH D 203 O 87.2 179.4 91.7 88.7 92.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 118 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 206 O REMARK 620 2 HOH A 214 O 95.3 REMARK 620 3 HOH A 217 O 92.1 88.9 REMARK 620 4 HOH C 201 O 84.8 179.7 90.9 REMARK 620 5 HOH C 213 O 179.3 85.3 88.1 94.5 REMARK 620 6 HOH C 222 O 88.3 91.2 179.6 89.0 91.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 119 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 204 O REMARK 620 2 HOH A 209 O 87.7 REMARK 620 3 HOH A 220 O 179.6 92.7 REMARK 620 4 HOH A 221 O 91.3 85.4 88.5 REMARK 620 5 HOH A 223 O 91.8 179.5 87.8 94.7 REMARK 620 6 HOH A 227 O 88.5 93.8 91.7 179.1 86.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 115 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 208 O REMARK 620 2 HOH B 206 O 90.0 REMARK 620 3 HOH C 203 O 90.7 87.3 REMARK 620 4 HOH C 226 O 90.3 179.6 92.4 REMARK 620 5 HOH D 205 O 179.5 90.5 89.4 89.3 REMARK 620 6 HOH D 209 O 89.0 92.5 179.7 87.8 90.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 116 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 211 O REMARK 620 2 HOH A 215 O 89.7 REMARK 620 3 HOH A 216 O 179.6 90.5 REMARK 620 4 HOH A 224 O 88.8 88.8 91.6 REMARK 620 5 HOH C 214 O 91.1 90.8 88.5 179.6 REMARK 620 6 HOH C 223 O 90.4 179.6 89.5 90.9 89.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 117 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 219 O REMARK 620 2 HOH A 230 O 89.3 REMARK 620 3 HOH C 208 O 90.4 179.6 REMARK 620 4 HOH C 216 O 86.6 90.3 89.8 REMARK 620 5 HOH C 221 O 179.5 90.6 89.7 92.9 REMARK 620 6 HOH C 224 O 93.8 90.1 89.7 179.4 86.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 114 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 222 O REMARK 620 2 HOH C 205 O 179.5 REMARK 620 3 HOH C 211 O 89.3 90.6 REMARK 620 4 HOH C 225 O 90.0 89.6 91.2 REMARK 620 5 HOH D 204 O 90.4 90.0 88.8 179.6 REMARK 620 6 HOH D 206 O 90.6 89.5 179.6 89.3 90.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SM D 101 SM REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 205 O REMARK 620 2 A D 15 OP2 145.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SM C 101 SM REMARK 620 N RES CSSEQI ATOM REMARK 620 1 C C 41 OP2 REMARK 620 2 G C 42 OP2 105.0 REMARK 620 3 HOH C 202 O 55.8 160.5 REMARK 620 4 HOH C 204 O 151.8 66.9 131.1 REMARK 620 5 HOH C 206 O 153.2 52.6 144.4 41.2 REMARK 620 6 HOH C 220 O 110.7 136.9 61.0 70.2 96.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 112 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C 207 O REMARK 620 2 HOH C 212 O 179.7 REMARK 620 3 HOH C 215 O 86.9 92.8 REMARK 620 4 HOH C 217 O 90.6 89.5 92.1 REMARK 620 5 HOH C 228 O 93.0 87.3 179.6 87.5 REMARK 620 6 HOH C 232 O 89.1 90.8 87.7 179.7 92.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 113 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C 209 O REMARK 620 2 HOH C 218 O 90.2 REMARK 620 3 HOH C 229 O 93.4 92.6 REMARK 620 4 HOH C 231 O 86.9 87.0 179.5 REMARK 620 5 HOH C 233 O 179.6 90.1 86.8 92.8 REMARK 620 6 HOH D 210 O 89.6 179.5 86.9 93.4 90.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SM A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SM A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SM A 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SM A 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SM A 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 107 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 109 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NCO A 110 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NCO A 111 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NCO A 112 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NCO A 113 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NCO A 114 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 115 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 116 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 117 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 118 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 119 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NCO B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SM C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SM C 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SM C 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 107 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 108 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NCO C 109 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NCO C 110 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NCO C 111 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 112 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 113 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 114 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 115 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 116 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 117 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SM D 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AG1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NCO D 102 DBREF 5KTJ A 1 50 PDB 5KTJ 5KTJ 1 50 DBREF 5KTJ B 1 15 PDB 5KTJ 5KTJ 1 15 DBREF 5KTJ C 1 50 PDB 5KTJ 5KTJ 1 50 DBREF 5KTJ D 1 15 PDB 5KTJ 5KTJ 1 15 SEQRES 1 A 50 ATP C U C G U U U G A G C G SEQRES 2 A 50 A G U A U A A A C A G U U SEQRES 3 A 50 G G U U A G G C U C A A A SEQRES 4 A 50 G C G G A G A G C A G SEQRES 1 B 15 U C U G C U C U C G U C C SEQRES 2 B 15 A A SEQRES 1 C 50 ATP C U C G U U U G A G C G SEQRES 2 C 50 A G U A U A A A C A G U U SEQRES 3 C 50 G G U U A G G C U C A A A SEQRES 4 C 50 G C G G A G A G C A G SEQRES 1 D 15 U C U G C U C U C G U C C SEQRES 2 D 15 A A HET ATP A 1 31 HET ATP C 1 31 HET SM A 101 1 HET SM A 102 1 HET SM A 103 1 HET SM A 104 1 HET SM A 105 1 HET MG A 106 1 HET MG A 107 1 HET MG A 108 1 HET MG A 109 1 HET NCO A 110 7 HET NCO A 111 7 HET NCO A 112 7 HET NCO A 113 7 HET NCO A 114 7 HET MG A 115 1 HET MG A 116 1 HET MG A 117 1 HET MG A 118 1 HET MG A 119 1 HET NCO B 101 7 HET SM C 101 1 HET SM C 102 1 HET SM C 103 1 HET SM C 104 1 HET MG C 105 1 HET MG C 106 1 HET MG C 107 1 HET MG C 108 1 HET NCO C 109 7 HET NCO C 110 7 HET NCO C 111 7 HET MG C 112 1 HET MG C 113 1 HET MG C 114 1 HET MG C 115 1 HET MG C 116 1 HET MG C 117 1 HET SM D 101 1 HET NCO D 102 7 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM SM SAMARIUM (III) ION HETNAM MG MAGNESIUM ION HETNAM NCO COBALT HEXAMMINE(III) FORMUL 1 ATP 2(C10 H16 N5 O13 P3) FORMUL 5 SM 10(SM 3+) FORMUL 10 MG 19(MG 2+) FORMUL 14 NCO 10(CO H18 N6 3+) FORMUL 44 HOH *81(H2 O) LINK O3' ATP A 1 P C A 2 1555 1555 1.60 LINK O3' ATP C 1 P C C 2 1555 1555 1.63 LINK OP2 C A 22 SM SM A 102 1555 1555 2.57 LINK O3' C A 22 SM SM A 102 1555 1555 2.56 LINK OP2 C A 41 SM SM A 101 1555 1555 2.02 LINK OP2 G A 42 SM SM A 101 1555 1555 2.32 LINK SM SM A 101 O HOH A 205 1555 1555 2.55 LINK SM SM A 101 O HOH A 212 1555 1555 2.31 LINK MG MG A 115 O HOH A 210 1555 1555 2.18 LINK MG MG A 115 O HOH A 213 1555 1555 2.18 LINK MG MG A 115 O HOH B 201 1555 16665 2.18 LINK MG MG A 115 O HOH B 202 1555 1555 2.18 LINK MG MG A 115 O HOH B 203 1555 1555 2.19 LINK MG MG A 115 O HOH D 201 1555 10665 2.18 LINK MG MG A 116 O HOH A 218 1555 1555 2.18 LINK MG MG A 116 O HOH A 226 1555 1555 2.20 LINK MG MG A 116 O HOH A 228 1555 1555 2.19 LINK MG MG A 116 O HOH A 229 1555 1555 2.19 LINK MG MG A 116 O HOH B 207 1555 1555 2.18 LINK MG MG A 116 O HOH B 208 1555 1555 2.19 LINK MG MG A 117 O HOH A 201 1555 1555 2.18 LINK MG MG A 117 O HOH A 202 1555 1555 2.18 LINK MG MG A 117 O HOH A 203 1555 1555 2.18 LINK MG MG A 117 O HOH A 207 1555 1555 2.18 LINK MG MG A 117 O HOH D 202 1555 7555 2.18 LINK MG MG A 117 O HOH D 203 1555 7555 2.17 LINK MG MG A 118 O HOH A 206 1555 1555 2.19 LINK MG MG A 118 O HOH A 214 1555 1555 2.20 LINK MG MG A 118 O HOH A 217 1555 1555 2.19 LINK MG MG A 118 O HOH C 201 1555 3655 2.18 LINK MG MG A 118 O HOH C 213 1555 3655 2.18 LINK MG MG A 118 O HOH C 222 1555 3655 2.18 LINK MG MG A 119 O HOH A 204 1555 1555 2.18 LINK MG MG A 119 O HOH A 209 1555 1555 2.18 LINK MG MG A 119 O HOH A 220 1555 1555 2.20 LINK MG MG A 119 O HOH A 221 1555 1555 2.19 LINK MG MG A 119 O HOH A 223 1555 1555 2.21 LINK MG MG A 119 O HOH A 227 1555 1555 2.18 LINK O HOH A 208 MG MG C 115 7445 1555 2.19 LINK O HOH A 211 MG MG C 116 10665 1555 2.18 LINK O HOH A 215 MG MG C 116 10665 1555 2.19 LINK O HOH A 216 MG MG C 116 1555 1555 2.19 LINK O HOH A 219 MG MG C 117 1555 1555 2.18 LINK O HOH A 222 MG MG C 114 7445 1555 2.18 LINK O HOH A 224 MG MG C 116 10665 1555 2.18 LINK O HOH A 230 MG MG C 117 1555 1555 2.19 LINK O HOH B 205 SM SM D 101 10665 1555 2.18 LINK O HOH B 206 MG MG C 115 10665 1555 2.20 LINK OP2 C C 41 SM SM C 101 1555 1555 2.11 LINK OP2 G C 42 SM SM C 101 1555 1555 2.30 LINK N7 G C 50 SM SM C 102 1555 1555 3.40 LINK SM SM C 101 O HOH C 202 1555 1555 2.75 LINK SM SM C 101 O HOH C 204 1555 1555 2.05 LINK SM SM C 101 O HOH C 206 1555 1555 3.14 LINK SM SM C 101 O HOH C 220 1555 1555 2.25 LINK SM SM C 103 OP1 C D 13 6555 1555 2.97 LINK MG MG C 112 O HOH C 207 1555 1555 2.19 LINK MG MG C 112 O HOH C 212 1555 1555 2.19 LINK MG MG C 112 O HOH C 215 1555 1555 2.19 LINK MG MG C 112 O HOH C 217 1555 1555 2.19 LINK MG MG C 112 O HOH C 228 1555 1555 2.19 LINK MG MG C 112 O HOH C 232 1555 1555 2.18 LINK MG MG C 113 O HOH C 209 1555 1555 2.19 LINK MG MG C 113 O HOH C 218 1555 1555 2.18 LINK MG MG C 113 O HOH C 229 1555 1555 2.18 LINK MG MG C 113 O HOH C 231 1555 1555 2.19 LINK MG MG C 113 O HOH C 233 1555 1555 2.18 LINK MG MG C 113 O HOH D 210 1555 1555 2.18 LINK MG MG C 114 O HOH C 205 1555 1555 2.18 LINK MG MG C 114 O HOH C 211 1555 1555 2.18 LINK MG MG C 114 O HOH C 225 1555 1555 2.18 LINK MG MG C 114 O HOH D 204 1555 1555 2.18 LINK MG MG C 114 O HOH D 206 1555 1555 2.19 LINK MG MG C 115 O HOH C 203 1555 1555 2.17 LINK MG MG C 115 O HOH C 226 1555 1555 2.18 LINK MG MG C 115 O HOH D 205 1555 1555 2.19 LINK MG MG C 115 O HOH D 209 1555 1555 2.19 LINK MG MG C 116 O HOH C 214 1555 1555 2.18 LINK MG MG C 116 O HOH C 223 1555 1555 2.19 LINK MG MG C 117 O HOH C 208 1555 1555 2.18 LINK MG MG C 117 O HOH C 216 1555 1555 2.18 LINK MG MG C 117 O HOH C 221 1555 1555 2.19 LINK MG MG C 117 O HOH C 224 1555 1555 2.19 LINK OP2 A D 15 SM SM D 101 1555 1555 2.46 SITE 1 AC1 4 C A 41 G A 42 HOH A 205 HOH A 212 SITE 1 AC2 3 C A 22 A A 23 G C 50 SITE 1 AC3 2 G A 32 SM C 102 SITE 1 AC4 1 U C 30 SITE 1 AC5 1 U A 18 SITE 1 AC6 2 C A 2 U A 3 SITE 1 AC7 1 G A 24 SITE 1 AC8 2 U A 6 G A 33 SITE 1 AC9 4 G A 27 G A 28 U A 29 U B 11 SITE 1 AD1 4 A A 49 G A 50 U C 30 G C 32 SITE 1 AD2 5 A A 37 A A 38 G A 40 U B 11 SITE 2 AD2 5 C B 12 SITE 1 AD3 5 A A 46 G A 47 U C 29 U C 30 SITE 2 AD3 5 A C 31 SITE 1 AD4 6 A A 14 G A 15 U A 16 A C 14 SITE 2 AD4 6 G C 15 U C 16 SITE 1 AD5 6 HOH A 210 HOH A 213 HOH B 201 HOH B 202 SITE 2 AD5 6 HOH B 203 HOH D 201 SITE 1 AD6 6 HOH A 218 HOH A 226 HOH A 228 HOH A 229 SITE 2 AD6 6 HOH B 207 HOH B 208 SITE 1 AD7 8 A A 31 A A 44 HOH A 201 HOH A 202 SITE 2 AD7 8 HOH A 203 HOH A 207 HOH D 202 HOH D 203 SITE 1 AD8 6 HOH A 206 HOH A 214 HOH A 217 HOH C 201 SITE 2 AD8 6 HOH C 213 HOH C 222 SITE 1 AD9 6 HOH A 204 HOH A 209 HOH A 220 HOH A 221 SITE 2 AD9 6 HOH A 223 HOH A 227 SITE 1 AE1 3 G A 40 C B 9 G B 10 SITE 1 AE2 5 C C 41 G C 42 HOH C 202 HOH C 204 SITE 2 AE2 5 HOH C 220 SITE 1 AE3 2 SM A 103 G C 50 SITE 1 AE4 2 A A 31 C D 13 SITE 1 AE5 1 A C 31 SITE 1 AE6 1 A C 44 SITE 1 AE7 1 G C 47 SITE 1 AE8 1 G C 33 SITE 1 AE9 5 A C 37 A C 38 G C 40 U D 11 SITE 2 AE9 5 C D 12 SITE 1 AF1 3 C A 48 A A 49 U C 29 SITE 1 AF2 4 G C 27 G C 28 U C 29 U D 11 SITE 1 AF3 6 HOH C 207 HOH C 212 HOH C 215 HOH C 217 SITE 2 AF3 6 HOH C 228 HOH C 232 SITE 1 AF4 6 HOH C 209 HOH C 218 HOH C 229 HOH C 231 SITE 2 AF4 6 HOH C 233 HOH D 210 SITE 1 AF5 6 HOH A 222 HOH C 205 HOH C 211 HOH C 225 SITE 2 AF5 6 HOH D 204 HOH D 206 SITE 1 AF6 6 HOH A 208 HOH B 206 HOH C 203 HOH C 226 SITE 2 AF6 6 HOH D 205 HOH D 209 SITE 1 AF7 6 HOH A 211 HOH A 215 HOH A 216 HOH A 224 SITE 2 AF7 6 HOH C 214 HOH C 223 SITE 1 AF8 6 HOH A 219 HOH A 230 HOH C 208 HOH C 216 SITE 2 AF8 6 HOH C 221 HOH C 224 SITE 1 AF9 2 HOH B 205 A D 15 SITE 1 AG1 2 C D 9 G D 10 CRYST1 85.190 85.190 256.540 90.00 90.00 90.00 I 41 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011738 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011738 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003898 0.00000 HETATM 1 PG ATP A 1 16.542 60.784 56.996 1.00197.51 P ANISOU 1 PG ATP A 1 22545 27062 25434 250 -1379 -3121 P HETATM 2 O1G ATP A 1 15.941 62.180 56.998 1.00188.53 O ANISOU 2 O1G ATP A 1 21164 25869 24598 376 -1500 -3010 O HETATM 3 O2G ATP A 1 17.688 60.513 57.943 1.00171.56 O ANISOU 3 O2G ATP A 1 19484 23627 22073 265 -1210 -3176 O HETATM 4 O3G ATP A 1 15.451 59.746 57.095 1.00187.95 O ANISOU 4 O3G ATP A 1 21291 25954 24167 116 -1315 -3313 O HETATM 5 PB ATP A 1 17.932 61.469 54.392 1.00259.75 P ANISOU 5 PB ATP A 1 30480 35166 33046 299 -1710 -2672 P HETATM 6 O1B ATP A 1 18.005 60.739 53.055 1.00241.21 O ANISOU 6 O1B ATP A 1 28182 33035 30430 181 -1805 -2611 O HETATM 7 O2B ATP A 1 17.255 62.822 54.407 1.00271.21 O ANISOU 7 O2B ATP A 1 31681 36567 34796 422 -1841 -2550 O HETATM 8 O3B ATP A 1 17.229 60.498 55.526 1.00230.66 O ANISOU 8 O3B ATP A 1 26832 31424 29382 212 -1514 -2948 O HETATM 9 PA ATP A 1 20.563 62.611 54.182 1.00272.28 P ANISOU 9 PA ATP A 1 32322 36587 34543 468 -1736 -2372 P HETATM 10 O1A ATP A 1 20.128 62.812 52.741 1.00274.16 O ANISOU 10 O1A ATP A 1 32437 37022 34709 434 -1942 -2213 O HETATM 11 O2A ATP A 1 20.797 63.822 55.066 1.00266.65 O ANISOU 11 O2A ATP A 1 31543 35681 34088 601 -1714 -2326 O HETATM 12 O3A ATP A 1 19.459 61.665 54.908 1.00260.98 O ANISOU 12 O3A ATP A 1 30852 35168 33138 371 -1611 -2619 O HETATM 13 O5' ATP A 1 21.921 61.705 54.163 1.00253.28 O ANISOU 13 O5' ATP A 1 30193 34174 31868 418 -1614 -2392 O HETATM 14 C5' ATP A 1 22.924 61.622 55.197 1.00227.15 C ANISOU 14 C5' ATP A 1 27046 30708 28550 460 -1457 -2439 C HETATM 15 C4' ATP A 1 22.426 60.765 56.372 1.00213.27 C ANISOU 15 C4' ATP A 1 25335 28880 26817 398 -1273 -2666 C HETATM 16 O4' ATP A 1 22.527 59.332 56.223 1.00201.83 O ANISOU 16 O4' ATP A 1 24035 27498 25150 283 -1160 -2782 O HETATM 17 C3' ATP A 1 23.203 60.971 57.649 1.00201.97 C ANISOU 17 C3' ATP A 1 24006 27286 25444 446 -1131 -2708 C HETATM 18 O3' ATP A 1 23.082 62.310 58.167 1.00198.73 O ANISOU 18 O3' ATP A 1 23467 26767 25274 543 -1179 -2654 O HETATM 19 C2' ATP A 1 22.666 59.823 58.522 1.00196.41 C ANISOU 19 C2' ATP A 1 23365 26563 24697 349 -960 -2923 C HETATM 20 O2' ATP A 1 21.451 60.072 59.256 1.00184.79 O ANISOU 20 O2' ATP A 1 21738 25051 23422 334 -932 -3065 O HETATM 21 C1' ATP A 1 22.412 58.700 57.523 1.00185.89 C ANISOU 21 C1' ATP A 1 22092 25373 23164 249 -973 -2955 C HETATM 22 N9 ATP A 1 23.400 57.593 57.728 1.00170.89 N ANISOU 22 N9 ATP A 1 20418 23448 21064 203 -820 -2985 N HETATM 23 C8 ATP A 1 24.579 57.509 57.065 1.00164.41 C ANISOU 23 C8 ATP A 1 19724 22649 20092 231 -838 -2849 C HETATM 24 N7 ATP A 1 25.309 56.415 57.424 1.00154.40 N ANISOU 24 N7 ATP A 1 18642 21341 18680 190 -672 -2899 N HETATM 25 C5 ATP A 1 24.581 55.770 58.362 1.00159.76 C ANISOU 25 C5 ATP A 1 19319 21970 19411 129 -546 -3069 C HETATM 26 C6 ATP A 1 24.794 54.535 59.171 1.00154.01 C ANISOU 26 C6 ATP A 1 18740 21176 18601 65 -341 -3184 C HETATM 27 N6 ATP A 1 25.950 53.855 58.968 1.00152.62 N ANISOU 27 N6 ATP A 1 18734 20975 18277 75 -250 -3109 N HETATM 28 N1 ATP A 1 23.826 54.160 60.064 1.00146.06 N ANISOU 28 N1 ATP A 1 17684 20132 17679 2 -254 -3351 N HETATM 29 C2 ATP A 1 22.685 54.905 60.209 1.00150.74 C ANISOU 29 C2 ATP A 1 18090 20749 18434 0 -347 -3419 C HETATM 30 N3 ATP A 1 22.422 56.058 59.509 1.00152.77 N ANISOU 30 N3 ATP A 1 18193 21058 18791 68 -531 -3316 N HETATM 31 C4 ATP A 1 23.318 56.541 58.578 1.00161.90 C ANISOU 31 C4 ATP A 1 19386 22256 19871 132 -641 -3136 C