data_5KVT # _entry.id 5KVT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5KVT pdb_00005kvt 10.2210/pdb5kvt/pdb WWPDB D_1000222770 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5KVT _pdbx_database_status.recvd_initial_deposition_date 2016-07-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jin, L.' 1 'Yan, S.' 2 'Wei, G.' 3 'Li, G.' 4 'Harris, J.' 5 'Vernier, J.-M.' 6 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Antitumor Activity and Safety of the Pan-TRK, ROS1, and ALK inhibitor Entrectinib (RXDX-101): Combined Results from Two Phase I Trials ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # _citation_author.citation_id primary _citation_author.name 'Drilon, A.' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 5KVT _cell.details ? _cell.formula_units_Z ? _cell.length_a 75.900 _cell.length_a_esd ? _cell.length_b 75.900 _cell.length_b_esd ? _cell.length_c 111.740 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KVT _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'High affinity nerve growth factor receptor' 33508.656 1 2.7.10.1 ? 'kinase domain (UNP residues 501-787)' ? 2 non-polymer syn Entrectinib 560.637 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 11 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Neurotrophic tyrosine kinase receptor type 1,TRK1-transforming tyrosine kinase protein,Tropomyosin-related kinase A,Tyrosine kinase receptor,Tyrosine kinase receptor A,Trk-A,gp140trk,p140-TrkA ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;CVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCT EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI TQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;CVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCT EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI TQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CYS n 1 2 VAL n 1 3 HIS n 1 4 HIS n 1 5 ILE n 1 6 LYS n 1 7 ARG n 1 8 ARG n 1 9 ASP n 1 10 ILE n 1 11 VAL n 1 12 LEU n 1 13 LYS n 1 14 TRP n 1 15 GLU n 1 16 LEU n 1 17 GLY n 1 18 GLU n 1 19 GLY n 1 20 ALA n 1 21 PHE n 1 22 GLY n 1 23 LYS n 1 24 VAL n 1 25 PHE n 1 26 LEU n 1 27 ALA n 1 28 GLU n 1 29 CYS n 1 30 HIS n 1 31 ASN n 1 32 LEU n 1 33 LEU n 1 34 PRO n 1 35 GLU n 1 36 GLN n 1 37 ASP n 1 38 LYS n 1 39 MET n 1 40 LEU n 1 41 VAL n 1 42 ALA n 1 43 VAL n 1 44 LYS n 1 45 ALA n 1 46 LEU n 1 47 LYS n 1 48 GLU n 1 49 ALA n 1 50 SER n 1 51 GLU n 1 52 SER n 1 53 ALA n 1 54 ARG n 1 55 GLN n 1 56 ASP n 1 57 PHE n 1 58 GLN n 1 59 ARG n 1 60 GLU n 1 61 ALA n 1 62 GLU n 1 63 LEU n 1 64 LEU n 1 65 THR n 1 66 MET n 1 67 LEU n 1 68 GLN n 1 69 HIS n 1 70 GLN n 1 71 HIS n 1 72 ILE n 1 73 VAL n 1 74 ARG n 1 75 PHE n 1 76 PHE n 1 77 GLY n 1 78 VAL n 1 79 CYS n 1 80 THR n 1 81 GLU n 1 82 GLY n 1 83 ARG n 1 84 PRO n 1 85 LEU n 1 86 LEU n 1 87 MET n 1 88 VAL n 1 89 PHE n 1 90 GLU n 1 91 TYR n 1 92 MET n 1 93 ARG n 1 94 HIS n 1 95 GLY n 1 96 ASP n 1 97 LEU n 1 98 ASN n 1 99 ARG n 1 100 PHE n 1 101 LEU n 1 102 ARG n 1 103 SER n 1 104 HIS n 1 105 GLY n 1 106 PRO n 1 107 ASP n 1 108 ALA n 1 109 LYS n 1 110 LEU n 1 111 LEU n 1 112 ALA n 1 113 GLY n 1 114 GLY n 1 115 GLU n 1 116 ASP n 1 117 VAL n 1 118 ALA n 1 119 PRO n 1 120 GLY n 1 121 PRO n 1 122 LEU n 1 123 GLY n 1 124 LEU n 1 125 GLY n 1 126 GLN n 1 127 LEU n 1 128 LEU n 1 129 ALA n 1 130 VAL n 1 131 ALA n 1 132 SER n 1 133 GLN n 1 134 VAL n 1 135 ALA n 1 136 ALA n 1 137 GLY n 1 138 MET n 1 139 VAL n 1 140 TYR n 1 141 LEU n 1 142 ALA n 1 143 GLY n 1 144 LEU n 1 145 HIS n 1 146 PHE n 1 147 VAL n 1 148 HIS n 1 149 ARG n 1 150 ASP n 1 151 LEU n 1 152 ALA n 1 153 THR n 1 154 ARG n 1 155 ASN n 1 156 CYS n 1 157 LEU n 1 158 VAL n 1 159 GLY n 1 160 GLN n 1 161 GLY n 1 162 LEU n 1 163 VAL n 1 164 VAL n 1 165 LYS n 1 166 ILE n 1 167 GLY n 1 168 ASP n 1 169 PHE n 1 170 GLY n 1 171 MET n 1 172 SER n 1 173 ARG n 1 174 ASP n 1 175 ILE n 1 176 TYR n 1 177 SER n 1 178 THR n 1 179 ASP n 1 180 TYR n 1 181 TYR n 1 182 ARG n 1 183 VAL n 1 184 GLY n 1 185 GLY n 1 186 ARG n 1 187 THR n 1 188 MET n 1 189 LEU n 1 190 PRO n 1 191 ILE n 1 192 ARG n 1 193 TRP n 1 194 MET n 1 195 PRO n 1 196 PRO n 1 197 GLU n 1 198 SER n 1 199 ILE n 1 200 LEU n 1 201 TYR n 1 202 ARG n 1 203 LYS n 1 204 PHE n 1 205 THR n 1 206 THR n 1 207 GLU n 1 208 SER n 1 209 ASP n 1 210 VAL n 1 211 TRP n 1 212 SER n 1 213 PHE n 1 214 GLY n 1 215 VAL n 1 216 VAL n 1 217 LEU n 1 218 TRP n 1 219 GLU n 1 220 ILE n 1 221 PHE n 1 222 THR n 1 223 TYR n 1 224 GLY n 1 225 LYS n 1 226 GLN n 1 227 PRO n 1 228 TRP n 1 229 TYR n 1 230 GLN n 1 231 LEU n 1 232 SER n 1 233 ASN n 1 234 THR n 1 235 GLU n 1 236 ALA n 1 237 ILE n 1 238 ASP n 1 239 CYS n 1 240 ILE n 1 241 THR n 1 242 GLN n 1 243 GLY n 1 244 ARG n 1 245 GLU n 1 246 LEU n 1 247 GLU n 1 248 ARG n 1 249 PRO n 1 250 ARG n 1 251 ALA n 1 252 CYS n 1 253 PRO n 1 254 PRO n 1 255 GLU n 1 256 VAL n 1 257 TYR n 1 258 ALA n 1 259 ILE n 1 260 MET n 1 261 ARG n 1 262 GLY n 1 263 CYS n 1 264 TRP n 1 265 GLN n 1 266 ARG n 1 267 GLU n 1 268 PRO n 1 269 GLN n 1 270 GLN n 1 271 ARG n 1 272 HIS n 1 273 SER n 1 274 ILE n 1 275 LYS n 1 276 ASP n 1 277 VAL n 1 278 HIS n 1 279 ALA n 1 280 ARG n 1 281 LEU n 1 282 GLN n 1 283 ALA n 1 284 LEU n 1 285 ALA n 1 286 GLN n 1 287 ALA n 1 288 HIS n 1 289 HIS n 1 290 HIS n 1 291 HIS n 1 292 HIS n 1 293 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 293 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NTRK1, MTC, TRK, TRKA' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain sf9 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type baculovirus _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pFastbac1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NTRK1_HUMAN _struct_ref.pdbx_db_accession P04629 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;CVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCT EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI TQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA ; _struct_ref.pdbx_align_begin 501 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5KVT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 287 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P04629 _struct_ref_seq.db_align_beg 501 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 787 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 501 _struct_ref_seq.pdbx_auth_seq_align_end 787 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5KVT HIS A 288 ? UNP P04629 ? ? 'expression tag' 788 1 1 5KVT HIS A 289 ? UNP P04629 ? ? 'expression tag' 789 2 1 5KVT HIS A 290 ? UNP P04629 ? ? 'expression tag' 790 3 1 5KVT HIS A 291 ? UNP P04629 ? ? 'expression tag' 791 4 1 5KVT HIS A 292 ? UNP P04629 ? ? 'expression tag' 792 5 1 5KVT HIS A 293 ? UNP P04629 ? ? 'expression tag' 793 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 YMX non-polymer . Entrectinib ? 'C31 H34 F2 N6 O2' 560.637 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5KVT _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.8 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 55.9 _exptl_crystal.description 'THIN AND LONG RODS (MAX. 0.05x0.05x0.4 mm^3)' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;VAPOR DIFFUSION, HANGING DROP, WELL SOLUTION: 0.1M BIS-TRIS, PH6.5, 2.6-3.0M AMMONIUMACETATE TEMPERATURE 277K ; _exptl_crystal_grow.pdbx_pH_range '6.5 - 7.5' # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details 'cryo-nitrogen stream' _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details 'PHI oscillation' _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-02-08 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Double-crystal, Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.2 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate 57.1 _reflns.entry_id 5KVT _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.45 _reflns.d_resolution_low 65.73 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 13472 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.5 _reflns.pdbx_Rmerge_I_obs 0.070 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.45 _reflns_shell.d_res_low 2.55 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.472 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 5.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.01 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] -0.01 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] 0.02 _refine.B_iso_max ? _refine.B_iso_mean 63.920 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.957 _refine.correlation_coeff_Fo_to_Fc_free 0.939 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5KVT _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.45 _refine.ls_d_res_low 65.73 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12781 _refine.ls_number_reflns_R_free 660 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.99 _refine.ls_percent_reflns_R_free 4.9 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.19478 _refine.ls_R_factor_R_free 0.23856 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.19249 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB ID: 4PMP' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.404 _refine.pdbx_overall_ESU_R_Free 0.256 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 9.835 _refine.overall_SU_ML 0.215 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 2299 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 47 _refine_hist.number_atoms_solvent 11 _refine_hist.number_atoms_total 2357 _refine_hist.d_res_high 2.45 _refine_hist.d_res_low 65.73 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.011 0.019 2417 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.006 0.020 2302 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.472 1.924 3268 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.864 2.975 5265 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.372 5.000 287 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 37.053 22.328 116 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 17.481 15.000 400 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 14.190 15.000 23 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.075 0.200 339 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 0.020 2724 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 612 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 5.818 6.148 1148 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 5.793 6.147 1147 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 8.966 9.196 1432 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 8.967 9.198 1433 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 5.744 6.539 1269 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 5.744 6.539 1269 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 9.050 9.566 1836 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 12.026 46.843 2643 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 12.024 46.847 2644 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.450 _refine_ls_shell.d_res_low 2.514 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 44 _refine_ls_shell.number_reflns_R_work 933 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.436 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.302 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5KVT _struct.title 'THE STRUCTURE OF TRKA KINASE DOMAIN BOUND TO THE INHIBITOR ENTRECTINIB' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5KVT _struct_keywords.text 'KINASE, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX, TRANSFERASE-TRANSFER complex' _struct_keywords.pdbx_keywords 'TRANSFERASE/TRANSFERASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 6 ? ARG A 8 ? LYS A 506 ARG A 508 5 ? 3 HELX_P HELX_P2 AA2 GLU A 51 ? LEU A 67 ? GLU A 551 LEU A 567 1 ? 17 HELX_P HELX_P3 AA3 ASP A 96 ? HIS A 104 ? ASP A 596 HIS A 604 1 ? 9 HELX_P HELX_P4 AA4 GLY A 123 ? LEU A 144 ? GLY A 623 LEU A 644 1 ? 22 HELX_P HELX_P5 AA5 ALA A 152 ? ARG A 154 ? ALA A 652 ARG A 654 5 ? 3 HELX_P HELX_P6 AA6 PRO A 190 ? MET A 194 ? PRO A 690 MET A 694 5 ? 5 HELX_P HELX_P7 AA7 PRO A 195 ? ARG A 202 ? PRO A 695 ARG A 702 1 ? 8 HELX_P HELX_P8 AA8 THR A 205 ? THR A 222 ? THR A 705 THR A 722 1 ? 18 HELX_P HELX_P9 AA9 SER A 232 ? GLY A 243 ? SER A 732 GLY A 743 1 ? 12 HELX_P HELX_P10 AB1 PRO A 253 ? TRP A 264 ? PRO A 753 TRP A 764 1 ? 12 HELX_P HELX_P11 AB2 GLU A 267 ? ARG A 271 ? GLU A 767 ARG A 771 5 ? 5 HELX_P HELX_P12 AB3 SER A 273 ? HIS A 288 ? SER A 773 HIS A 788 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ARG _struct_mon_prot_cis.label_seq_id 83 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ARG _struct_mon_prot_cis.auth_seq_id 583 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 84 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 584 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -8.32 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 2 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 10 ? GLU A 18 ? ILE A 510 GLU A 518 AA1 2 LYS A 23 ? HIS A 30 ? LYS A 523 HIS A 530 AA1 3 LYS A 38 ? ALA A 45 ? LYS A 538 ALA A 545 AA1 4 LEU A 86 ? GLU A 90 ? LEU A 586 GLU A 590 AA1 5 PHE A 75 ? CYS A 79 ? PHE A 575 CYS A 579 AA2 1 CYS A 156 ? GLY A 159 ? CYS A 656 GLY A 659 AA2 2 VAL A 163 ? ILE A 166 ? VAL A 663 ILE A 666 AA3 1 TYR A 181 ? GLY A 184 ? TYR A 681 GLY A 684 AA3 2 THR A 187 ? LEU A 189 ? THR A 687 LEU A 689 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 16 ? N LEU A 516 O VAL A 24 ? O VAL A 524 AA1 2 3 N ALA A 27 ? N ALA A 527 O VAL A 41 ? O VAL A 541 AA1 3 4 N ALA A 42 ? N ALA A 542 O PHE A 89 ? O PHE A 589 AA1 4 5 O VAL A 88 ? O VAL A 588 N GLY A 77 ? N GLY A 577 AA2 1 2 N LEU A 157 ? N LEU A 657 O LYS A 165 ? O LYS A 665 AA3 1 2 N TYR A 181 ? N TYR A 681 O LEU A 189 ? O LEU A 689 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A YMX 801 ? 18 'binding site for residue YMX A 801' AC2 Software A GOL 802 ? 7 'binding site for residue GOL A 802' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 18 LEU A 16 ? LEU A 516 . ? 1_555 ? 2 AC1 18 GLU A 18 ? GLU A 518 . ? 1_555 ? 3 AC1 18 VAL A 24 ? VAL A 524 . ? 1_555 ? 4 AC1 18 ALA A 42 ? ALA A 542 . ? 1_555 ? 5 AC1 18 PHE A 89 ? PHE A 589 . ? 1_555 ? 6 AC1 18 GLU A 90 ? GLU A 590 . ? 1_555 ? 7 AC1 18 MET A 92 ? MET A 592 . ? 1_555 ? 8 AC1 18 ARG A 93 ? ARG A 593 . ? 1_555 ? 9 AC1 18 GLY A 95 ? GLY A 595 . ? 1_555 ? 10 AC1 18 ASP A 96 ? ASP A 596 . ? 1_555 ? 11 AC1 18 ARG A 99 ? ARG A 599 . ? 1_555 ? 12 AC1 18 GLU A 115 ? GLU A 615 . ? 4_545 ? 13 AC1 18 ARG A 154 ? ARG A 654 . ? 1_555 ? 14 AC1 18 ASN A 155 ? ASN A 655 . ? 1_555 ? 15 AC1 18 CYS A 156 ? CYS A 656 . ? 1_555 ? 16 AC1 18 LEU A 157 ? LEU A 657 . ? 1_555 ? 17 AC1 18 GLY A 167 ? GLY A 667 . ? 1_555 ? 18 AC1 18 ASP A 168 ? ASP A 668 . ? 1_555 ? 19 AC2 7 TRP A 211 ? TRP A 711 . ? 1_555 ? 20 AC2 7 TRP A 228 ? TRP A 728 . ? 1_555 ? 21 AC2 7 ILE A 240 ? ILE A 740 . ? 1_555 ? 22 AC2 7 ARG A 244 ? ARG A 744 . ? 1_555 ? 23 AC2 7 GLU A 245 ? GLU A 745 . ? 1_555 ? 24 AC2 7 LEU A 246 ? LEU A 746 . ? 1_555 ? 25 AC2 7 TRP A 264 ? TRP A 764 . ? 1_555 ? # _atom_sites.entry_id 5KVT _atom_sites.fract_transf_matrix[1][1] 0.013175 _atom_sites.fract_transf_matrix[1][2] 0.007607 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015213 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008949 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CYS 1 501 501 CYS CYS A . n A 1 2 VAL 2 502 502 VAL VAL A . n A 1 3 HIS 3 503 503 HIS HIS A . n A 1 4 HIS 4 504 504 HIS HIS A . n A 1 5 ILE 5 505 505 ILE ILE A . n A 1 6 LYS 6 506 506 LYS LYS A . n A 1 7 ARG 7 507 507 ARG ARG A . n A 1 8 ARG 8 508 508 ARG ARG A . n A 1 9 ASP 9 509 509 ASP ASP A . n A 1 10 ILE 10 510 510 ILE ILE A . n A 1 11 VAL 11 511 511 VAL VAL A . n A 1 12 LEU 12 512 512 LEU LEU A . n A 1 13 LYS 13 513 513 LYS LYS A . n A 1 14 TRP 14 514 514 TRP TRP A . n A 1 15 GLU 15 515 515 GLU GLU A . n A 1 16 LEU 16 516 516 LEU LEU A . n A 1 17 GLY 17 517 517 GLY GLY A . n A 1 18 GLU 18 518 518 GLU GLU A . n A 1 19 GLY 19 519 519 GLY GLY A . n A 1 20 ALA 20 520 520 ALA ALA A . n A 1 21 PHE 21 521 521 PHE PHE A . n A 1 22 GLY 22 522 522 GLY GLY A . n A 1 23 LYS 23 523 523 LYS LYS A . n A 1 24 VAL 24 524 524 VAL VAL A . n A 1 25 PHE 25 525 525 PHE PHE A . n A 1 26 LEU 26 526 526 LEU LEU A . n A 1 27 ALA 27 527 527 ALA ALA A . n A 1 28 GLU 28 528 528 GLU GLU A . n A 1 29 CYS 29 529 529 CYS CYS A . n A 1 30 HIS 30 530 530 HIS HIS A . n A 1 31 ASN 31 531 531 ASN ASN A . n A 1 32 LEU 32 532 532 LEU LEU A . n A 1 33 LEU 33 533 ? ? ? A . n A 1 34 PRO 34 534 ? ? ? A . n A 1 35 GLU 35 535 ? ? ? A . n A 1 36 GLN 36 536 ? ? ? A . n A 1 37 ASP 37 537 537 ASP ASP A . n A 1 38 LYS 38 538 538 LYS LYS A . n A 1 39 MET 39 539 539 MET MET A . n A 1 40 LEU 40 540 540 LEU LEU A . n A 1 41 VAL 41 541 541 VAL VAL A . n A 1 42 ALA 42 542 542 ALA ALA A . n A 1 43 VAL 43 543 543 VAL VAL A . n A 1 44 LYS 44 544 544 LYS LYS A . n A 1 45 ALA 45 545 545 ALA ALA A . n A 1 46 LEU 46 546 546 LEU LEU A . n A 1 47 LYS 47 547 547 LYS LYS A . n A 1 48 GLU 48 548 548 GLU GLU A . n A 1 49 ALA 49 549 549 ALA ALA A . n A 1 50 SER 50 550 550 SER SER A . n A 1 51 GLU 51 551 551 GLU GLU A . n A 1 52 SER 52 552 552 SER SER A . n A 1 53 ALA 53 553 553 ALA ALA A . n A 1 54 ARG 54 554 554 ARG ARG A . n A 1 55 GLN 55 555 555 GLN GLN A . n A 1 56 ASP 56 556 556 ASP ASP A . n A 1 57 PHE 57 557 557 PHE PHE A . n A 1 58 GLN 58 558 558 GLN GLN A . n A 1 59 ARG 59 559 559 ARG ARG A . n A 1 60 GLU 60 560 560 GLU GLU A . n A 1 61 ALA 61 561 561 ALA ALA A . n A 1 62 GLU 62 562 562 GLU GLU A . n A 1 63 LEU 63 563 563 LEU LEU A . n A 1 64 LEU 64 564 564 LEU LEU A . n A 1 65 THR 65 565 565 THR THR A . n A 1 66 MET 66 566 566 MET MET A . n A 1 67 LEU 67 567 567 LEU LEU A . n A 1 68 GLN 68 568 568 GLN GLN A . n A 1 69 HIS 69 569 569 HIS HIS A . n A 1 70 GLN 70 570 570 GLN GLN A . n A 1 71 HIS 71 571 571 HIS HIS A . n A 1 72 ILE 72 572 572 ILE ILE A . n A 1 73 VAL 73 573 573 VAL VAL A . n A 1 74 ARG 74 574 574 ARG ARG A . n A 1 75 PHE 75 575 575 PHE PHE A . n A 1 76 PHE 76 576 576 PHE PHE A . n A 1 77 GLY 77 577 577 GLY GLY A . n A 1 78 VAL 78 578 578 VAL VAL A . n A 1 79 CYS 79 579 579 CYS CYS A . n A 1 80 THR 80 580 580 THR THR A . n A 1 81 GLU 81 581 581 GLU GLU A . n A 1 82 GLY 82 582 582 GLY GLY A . n A 1 83 ARG 83 583 583 ARG ARG A . n A 1 84 PRO 84 584 584 PRO PRO A . n A 1 85 LEU 85 585 585 LEU LEU A . n A 1 86 LEU 86 586 586 LEU LEU A . n A 1 87 MET 87 587 587 MET MET A . n A 1 88 VAL 88 588 588 VAL VAL A . n A 1 89 PHE 89 589 589 PHE PHE A . n A 1 90 GLU 90 590 590 GLU GLU A . n A 1 91 TYR 91 591 591 TYR TYR A . n A 1 92 MET 92 592 592 MET MET A . n A 1 93 ARG 93 593 593 ARG ARG A . n A 1 94 HIS 94 594 594 HIS HIS A . n A 1 95 GLY 95 595 595 GLY GLY A . n A 1 96 ASP 96 596 596 ASP ASP A . n A 1 97 LEU 97 597 597 LEU LEU A . n A 1 98 ASN 98 598 598 ASN ASN A . n A 1 99 ARG 99 599 599 ARG ARG A . n A 1 100 PHE 100 600 600 PHE PHE A . n A 1 101 LEU 101 601 601 LEU LEU A . n A 1 102 ARG 102 602 602 ARG ARG A . n A 1 103 SER 103 603 603 SER SER A . n A 1 104 HIS 104 604 604 HIS HIS A . n A 1 105 GLY 105 605 605 GLY GLY A . n A 1 106 PRO 106 606 606 PRO PRO A . n A 1 107 ASP 107 607 607 ASP ASP A . n A 1 108 ALA 108 608 608 ALA ALA A . n A 1 109 LYS 109 609 609 LYS LYS A . n A 1 110 LEU 110 610 610 LEU LEU A . n A 1 111 LEU 111 611 611 LEU LEU A . n A 1 112 ALA 112 612 612 ALA ALA A . n A 1 113 GLY 113 613 613 GLY GLY A . n A 1 114 GLY 114 614 614 GLY GLY A . n A 1 115 GLU 115 615 615 GLU GLU A . n A 1 116 ASP 116 616 616 ASP ASP A . n A 1 117 VAL 117 617 617 VAL VAL A . n A 1 118 ALA 118 618 618 ALA ALA A . n A 1 119 PRO 119 619 619 PRO PRO A . n A 1 120 GLY 120 620 620 GLY GLY A . n A 1 121 PRO 121 621 621 PRO PRO A . n A 1 122 LEU 122 622 622 LEU LEU A . n A 1 123 GLY 123 623 623 GLY GLY A . n A 1 124 LEU 124 624 624 LEU LEU A . n A 1 125 GLY 125 625 625 GLY GLY A . n A 1 126 GLN 126 626 626 GLN GLN A . n A 1 127 LEU 127 627 627 LEU LEU A . n A 1 128 LEU 128 628 628 LEU LEU A . n A 1 129 ALA 129 629 629 ALA ALA A . n A 1 130 VAL 130 630 630 VAL VAL A . n A 1 131 ALA 131 631 631 ALA ALA A . n A 1 132 SER 132 632 632 SER SER A . n A 1 133 GLN 133 633 633 GLN GLN A . n A 1 134 VAL 134 634 634 VAL VAL A . n A 1 135 ALA 135 635 635 ALA ALA A . n A 1 136 ALA 136 636 636 ALA ALA A . n A 1 137 GLY 137 637 637 GLY GLY A . n A 1 138 MET 138 638 638 MET MET A . n A 1 139 VAL 139 639 639 VAL VAL A . n A 1 140 TYR 140 640 640 TYR TYR A . n A 1 141 LEU 141 641 641 LEU LEU A . n A 1 142 ALA 142 642 642 ALA ALA A . n A 1 143 GLY 143 643 643 GLY GLY A . n A 1 144 LEU 144 644 644 LEU LEU A . n A 1 145 HIS 145 645 645 HIS HIS A . n A 1 146 PHE 146 646 646 PHE PHE A . n A 1 147 VAL 147 647 647 VAL VAL A . n A 1 148 HIS 148 648 648 HIS HIS A . n A 1 149 ARG 149 649 649 ARG ARG A . n A 1 150 ASP 150 650 650 ASP ASP A . n A 1 151 LEU 151 651 651 LEU LEU A . n A 1 152 ALA 152 652 652 ALA ALA A . n A 1 153 THR 153 653 653 THR THR A . n A 1 154 ARG 154 654 654 ARG ARG A . n A 1 155 ASN 155 655 655 ASN ASN A . n A 1 156 CYS 156 656 656 CYS CYS A . n A 1 157 LEU 157 657 657 LEU LEU A . n A 1 158 VAL 158 658 658 VAL VAL A . n A 1 159 GLY 159 659 659 GLY GLY A . n A 1 160 GLN 160 660 660 GLN GLN A . n A 1 161 GLY 161 661 661 GLY GLY A . n A 1 162 LEU 162 662 662 LEU LEU A . n A 1 163 VAL 163 663 663 VAL VAL A . n A 1 164 VAL 164 664 664 VAL VAL A . n A 1 165 LYS 165 665 665 LYS LYS A . n A 1 166 ILE 166 666 666 ILE ILE A . n A 1 167 GLY 167 667 667 GLY GLY A . n A 1 168 ASP 168 668 668 ASP ASP A . n A 1 169 PHE 169 669 669 PHE PHE A . n A 1 170 GLY 170 670 670 GLY GLY A . n A 1 171 MET 171 671 671 MET MET A . n A 1 172 SER 172 672 672 SER SER A . n A 1 173 ARG 173 673 673 ARG ARG A . n A 1 174 ASP 174 674 674 ASP ASP A . n A 1 175 ILE 175 675 675 ILE ILE A . n A 1 176 TYR 176 676 676 TYR TYR A . n A 1 177 SER 177 677 677 SER SER A . n A 1 178 THR 178 678 678 THR THR A . n A 1 179 ASP 179 679 679 ASP ASP A . n A 1 180 TYR 180 680 680 TYR TYR A . n A 1 181 TYR 181 681 681 TYR TYR A . n A 1 182 ARG 182 682 682 ARG ARG A . n A 1 183 VAL 183 683 683 VAL VAL A . n A 1 184 GLY 184 684 684 GLY GLY A . n A 1 185 GLY 185 685 685 GLY GLY A . n A 1 186 ARG 186 686 686 ARG ARG A . n A 1 187 THR 187 687 687 THR THR A . n A 1 188 MET 188 688 688 MET MET A . n A 1 189 LEU 189 689 689 LEU LEU A . n A 1 190 PRO 190 690 690 PRO PRO A . n A 1 191 ILE 191 691 691 ILE ILE A . n A 1 192 ARG 192 692 692 ARG ARG A . n A 1 193 TRP 193 693 693 TRP TRP A . n A 1 194 MET 194 694 694 MET MET A . n A 1 195 PRO 195 695 695 PRO PRO A . n A 1 196 PRO 196 696 696 PRO PRO A . n A 1 197 GLU 197 697 697 GLU GLU A . n A 1 198 SER 198 698 698 SER SER A . n A 1 199 ILE 199 699 699 ILE ILE A . n A 1 200 LEU 200 700 700 LEU LEU A . n A 1 201 TYR 201 701 701 TYR TYR A . n A 1 202 ARG 202 702 702 ARG ARG A . n A 1 203 LYS 203 703 703 LYS LYS A . n A 1 204 PHE 204 704 704 PHE PHE A . n A 1 205 THR 205 705 705 THR THR A . n A 1 206 THR 206 706 706 THR THR A . n A 1 207 GLU 207 707 707 GLU GLU A . n A 1 208 SER 208 708 708 SER SER A . n A 1 209 ASP 209 709 709 ASP ASP A . n A 1 210 VAL 210 710 710 VAL VAL A . n A 1 211 TRP 211 711 711 TRP TRP A . n A 1 212 SER 212 712 712 SER SER A . n A 1 213 PHE 213 713 713 PHE PHE A . n A 1 214 GLY 214 714 714 GLY GLY A . n A 1 215 VAL 215 715 715 VAL VAL A . n A 1 216 VAL 216 716 716 VAL VAL A . n A 1 217 LEU 217 717 717 LEU LEU A . n A 1 218 TRP 218 718 718 TRP TRP A . n A 1 219 GLU 219 719 719 GLU GLU A . n A 1 220 ILE 220 720 720 ILE ILE A . n A 1 221 PHE 221 721 721 PHE PHE A . n A 1 222 THR 222 722 722 THR THR A . n A 1 223 TYR 223 723 723 TYR TYR A . n A 1 224 GLY 224 724 724 GLY GLY A . n A 1 225 LYS 225 725 725 LYS LYS A . n A 1 226 GLN 226 726 726 GLN GLN A . n A 1 227 PRO 227 727 727 PRO PRO A . n A 1 228 TRP 228 728 728 TRP TRP A . n A 1 229 TYR 229 729 729 TYR TYR A . n A 1 230 GLN 230 730 730 GLN GLN A . n A 1 231 LEU 231 731 731 LEU LEU A . n A 1 232 SER 232 732 732 SER SER A . n A 1 233 ASN 233 733 733 ASN ASN A . n A 1 234 THR 234 734 734 THR THR A . n A 1 235 GLU 235 735 735 GLU GLU A . n A 1 236 ALA 236 736 736 ALA ALA A . n A 1 237 ILE 237 737 737 ILE ILE A . n A 1 238 ASP 238 738 738 ASP ASP A . n A 1 239 CYS 239 739 739 CYS CYS A . n A 1 240 ILE 240 740 740 ILE ILE A . n A 1 241 THR 241 741 741 THR THR A . n A 1 242 GLN 242 742 742 GLN GLN A . n A 1 243 GLY 243 743 743 GLY GLY A . n A 1 244 ARG 244 744 744 ARG ARG A . n A 1 245 GLU 245 745 745 GLU GLU A . n A 1 246 LEU 246 746 746 LEU LEU A . n A 1 247 GLU 247 747 747 GLU GLU A . n A 1 248 ARG 248 748 748 ARG ARG A . n A 1 249 PRO 249 749 749 PRO PRO A . n A 1 250 ARG 250 750 750 ARG ARG A . n A 1 251 ALA 251 751 751 ALA ALA A . n A 1 252 CYS 252 752 752 CYS CYS A . n A 1 253 PRO 253 753 753 PRO PRO A . n A 1 254 PRO 254 754 754 PRO PRO A . n A 1 255 GLU 255 755 755 GLU GLU A . n A 1 256 VAL 256 756 756 VAL VAL A . n A 1 257 TYR 257 757 757 TYR TYR A . n A 1 258 ALA 258 758 758 ALA ALA A . n A 1 259 ILE 259 759 759 ILE ILE A . n A 1 260 MET 260 760 760 MET MET A . n A 1 261 ARG 261 761 761 ARG ARG A . n A 1 262 GLY 262 762 762 GLY GLY A . n A 1 263 CYS 263 763 763 CYS CYS A . n A 1 264 TRP 264 764 764 TRP TRP A . n A 1 265 GLN 265 765 765 GLN GLN A . n A 1 266 ARG 266 766 766 ARG ARG A . n A 1 267 GLU 267 767 767 GLU GLU A . n A 1 268 PRO 268 768 768 PRO PRO A . n A 1 269 GLN 269 769 769 GLN GLN A . n A 1 270 GLN 270 770 770 GLN GLN A . n A 1 271 ARG 271 771 771 ARG ARG A . n A 1 272 HIS 272 772 772 HIS HIS A . n A 1 273 SER 273 773 773 SER SER A . n A 1 274 ILE 274 774 774 ILE ILE A . n A 1 275 LYS 275 775 775 LYS LYS A . n A 1 276 ASP 276 776 776 ASP ASP A . n A 1 277 VAL 277 777 777 VAL VAL A . n A 1 278 HIS 278 778 778 HIS HIS A . n A 1 279 ALA 279 779 779 ALA ALA A . n A 1 280 ARG 280 780 780 ARG ARG A . n A 1 281 LEU 281 781 781 LEU LEU A . n A 1 282 GLN 282 782 782 GLN GLN A . n A 1 283 ALA 283 783 783 ALA ALA A . n A 1 284 LEU 284 784 784 LEU LEU A . n A 1 285 ALA 285 785 785 ALA ALA A . n A 1 286 GLN 286 786 786 GLN GLN A . n A 1 287 ALA 287 787 787 ALA ALA A . n A 1 288 HIS 288 788 788 HIS HIS A . n A 1 289 HIS 289 789 789 HIS HIS A . n A 1 290 HIS 290 790 790 HIS HIS A . n A 1 291 HIS 291 791 791 HIS HIS A . n A 1 292 HIS 292 792 ? ? ? A . n A 1 293 HIS 293 793 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 YMX 1 801 999 YMX LIG A . C 3 GOL 1 802 1 GOL GOL A . D 4 HOH 1 901 8 HOH HOH A . D 4 HOH 2 902 7 HOH HOH A . D 4 HOH 3 903 2 HOH HOH A . D 4 HOH 4 904 4 HOH HOH A . D 4 HOH 5 905 3 HOH HOH A . D 4 HOH 6 906 5 HOH HOH A . D 4 HOH 7 907 6 HOH HOH A . D 4 HOH 8 908 9 HOH HOH A . D 4 HOH 9 909 1 HOH HOH A . D 4 HOH 10 910 11 HOH HOH A . D 4 HOH 11 911 10 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 902 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-12-27 2 'Structure model' 1 1 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' pdbx_struct_special_symmetry # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0135 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? 7.2.1 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? 3.3.22 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? BALBES ? ? ? 0.0.1 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 650 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OH _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 TYR _pdbx_validate_close_contact.auth_seq_id_2 680 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 531 ? ? 70.53 84.14 2 1 GLU A 548 ? ? -79.21 -72.34 3 1 SER A 550 ? ? -99.94 -84.30 4 1 GLU A 551 ? ? -126.92 -67.21 5 1 PRO A 606 ? ? -62.66 12.58 6 1 LEU A 610 ? ? -59.82 -4.09 7 1 LEU A 611 ? ? -151.28 61.33 8 1 GLU A 615 ? ? -60.25 48.41 9 1 PRO A 619 ? ? -74.46 -158.03 10 1 ARG A 649 ? ? 79.90 -10.34 11 1 ASP A 650 ? ? -148.99 42.79 12 1 ASP A 674 ? ? -58.21 107.27 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 610 ? CG ? A LEU 110 CG 2 1 Y 1 A LEU 610 ? CD1 ? A LEU 110 CD1 3 1 Y 1 A LEU 610 ? CD2 ? A LEU 110 CD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LEU 533 ? A LEU 33 2 1 Y 1 A PRO 534 ? A PRO 34 3 1 Y 1 A GLU 535 ? A GLU 35 4 1 Y 1 A GLN 536 ? A GLN 36 5 1 Y 1 A HIS 792 ? A HIS 292 6 1 Y 1 A HIS 793 ? A HIS 293 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 PHE N N N N 264 PHE CA C N S 265 PHE C C N N 266 PHE O O N N 267 PHE CB C N N 268 PHE CG C Y N 269 PHE CD1 C Y N 270 PHE CD2 C Y N 271 PHE CE1 C Y N 272 PHE CE2 C Y N 273 PHE CZ C Y N 274 PHE OXT O N N 275 PHE H H N N 276 PHE H2 H N N 277 PHE HA H N N 278 PHE HB2 H N N 279 PHE HB3 H N N 280 PHE HD1 H N N 281 PHE HD2 H N N 282 PHE HE1 H N N 283 PHE HE2 H N N 284 PHE HZ H N N 285 PHE HXT H N N 286 PRO N N N N 287 PRO CA C N S 288 PRO C C N N 289 PRO O O N N 290 PRO CB C N N 291 PRO CG C N N 292 PRO CD C N N 293 PRO OXT O N N 294 PRO H H N N 295 PRO HA H N N 296 PRO HB2 H N N 297 PRO HB3 H N N 298 PRO HG2 H N N 299 PRO HG3 H N N 300 PRO HD2 H N N 301 PRO HD3 H N N 302 PRO HXT H N N 303 SER N N N N 304 SER CA C N S 305 SER C C N N 306 SER O O N N 307 SER CB C N N 308 SER OG O N N 309 SER OXT O N N 310 SER H H N N 311 SER H2 H N N 312 SER HA H N N 313 SER HB2 H N N 314 SER HB3 H N N 315 SER HG H N N 316 SER HXT H N N 317 THR N N N N 318 THR CA C N S 319 THR C C N N 320 THR O O N N 321 THR CB C N R 322 THR OG1 O N N 323 THR CG2 C N N 324 THR OXT O N N 325 THR H H N N 326 THR H2 H N N 327 THR HA H N N 328 THR HB H N N 329 THR HG1 H N N 330 THR HG21 H N N 331 THR HG22 H N N 332 THR HG23 H N N 333 THR HXT H N N 334 TRP N N N N 335 TRP CA C N S 336 TRP C C N N 337 TRP O O N N 338 TRP CB C N N 339 TRP CG C Y N 340 TRP CD1 C Y N 341 TRP CD2 C Y N 342 TRP NE1 N Y N 343 TRP CE2 C Y N 344 TRP CE3 C Y N 345 TRP CZ2 C Y N 346 TRP CZ3 C Y N 347 TRP CH2 C Y N 348 TRP OXT O N N 349 TRP H H N N 350 TRP H2 H N N 351 TRP HA H N N 352 TRP HB2 H N N 353 TRP HB3 H N N 354 TRP HD1 H N N 355 TRP HE1 H N N 356 TRP HE3 H N N 357 TRP HZ2 H N N 358 TRP HZ3 H N N 359 TRP HH2 H N N 360 TRP HXT H N N 361 TYR N N N N 362 TYR CA C N S 363 TYR C C N N 364 TYR O O N N 365 TYR CB C N N 366 TYR CG C Y N 367 TYR CD1 C Y N 368 TYR CD2 C Y N 369 TYR CE1 C Y N 370 TYR CE2 C Y N 371 TYR CZ C Y N 372 TYR OH O N N 373 TYR OXT O N N 374 TYR H H N N 375 TYR H2 H N N 376 TYR HA H N N 377 TYR HB2 H N N 378 TYR HB3 H N N 379 TYR HD1 H N N 380 TYR HD2 H N N 381 TYR HE1 H N N 382 TYR HE2 H N N 383 TYR HH H N N 384 TYR HXT H N N 385 VAL N N N N 386 VAL CA C N S 387 VAL C C N N 388 VAL O O N N 389 VAL CB C N N 390 VAL CG1 C N N 391 VAL CG2 C N N 392 VAL OXT O N N 393 VAL H H N N 394 VAL H2 H N N 395 VAL HA H N N 396 VAL HB H N N 397 VAL HG11 H N N 398 VAL HG12 H N N 399 VAL HG13 H N N 400 VAL HG21 H N N 401 VAL HG22 H N N 402 VAL HG23 H N N 403 VAL HXT H N N 404 YMX C1 C Y N 405 YMX C2 C Y N 406 YMX N3 N Y N 407 YMX N4 N Y N 408 YMX C5 C Y N 409 YMX N6 N N N 410 YMX C7 C N N 411 YMX O8 O N N 412 YMX C9 C Y N 413 YMX C10 C Y N 414 YMX C11 C Y N 415 YMX C12 C Y N 416 YMX N13 N N N 417 YMX C14 C N N 418 YMX C15 C N N 419 YMX N16 N N N 420 YMX C17 C N N 421 YMX C18 C N N 422 YMX C19 C N N 423 YMX C20 C Y N 424 YMX C21 C Y N 425 YMX N22 N N N 426 YMX C23 C N N 427 YMX C24 C N N 428 YMX C25 C N N 429 YMX O26 O N N 430 YMX C27 C N N 431 YMX C28 C N N 432 YMX C29 C Y N 433 YMX C30 C Y N 434 YMX C31 C Y N 435 YMX C32 C N N 436 YMX C33 C Y N 437 YMX C34 C Y N 438 YMX C35 C Y N 439 YMX F36 F N N 440 YMX C37 C Y N 441 YMX C38 C Y N 442 YMX F39 F N N 443 YMX C40 C Y N 444 YMX C41 C Y N 445 YMX H1 H N N 446 YMX H10 H N N 447 YMX H11 H N N 448 YMX H14 H N N 449 YMX H14A H N N 450 YMX H15 H N N 451 YMX H15A H N N 452 YMX H17 H N N 453 YMX H17A H N N 454 YMX H17B H N N 455 YMX H18 H N N 456 YMX H18A H N N 457 YMX H19 H N N 458 YMX H19A H N N 459 YMX H20 H N N 460 YMX HN22 H N N 461 YMX H23 H N N 462 YMX H24 H N N 463 YMX H24A H N N 464 YMX H25 H N N 465 YMX H25A H N N 466 YMX H27 H N N 467 YMX H27A H N N 468 YMX H28 H N N 469 YMX H28A H N N 470 YMX H30 H N N 471 YMX H32 H N N 472 YMX H32A H N N 473 YMX H34 H N N 474 YMX H37 H N N 475 YMX H40 H N N 476 YMX H41 H N N 477 YMX H6 H N N 478 YMX H3 H N N 479 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 PHE N CA sing N N 250 PHE N H sing N N 251 PHE N H2 sing N N 252 PHE CA C sing N N 253 PHE CA CB sing N N 254 PHE CA HA sing N N 255 PHE C O doub N N 256 PHE C OXT sing N N 257 PHE CB CG sing N N 258 PHE CB HB2 sing N N 259 PHE CB HB3 sing N N 260 PHE CG CD1 doub Y N 261 PHE CG CD2 sing Y N 262 PHE CD1 CE1 sing Y N 263 PHE CD1 HD1 sing N N 264 PHE CD2 CE2 doub Y N 265 PHE CD2 HD2 sing N N 266 PHE CE1 CZ doub Y N 267 PHE CE1 HE1 sing N N 268 PHE CE2 CZ sing Y N 269 PHE CE2 HE2 sing N N 270 PHE CZ HZ sing N N 271 PHE OXT HXT sing N N 272 PRO N CA sing N N 273 PRO N CD sing N N 274 PRO N H sing N N 275 PRO CA C sing N N 276 PRO CA CB sing N N 277 PRO CA HA sing N N 278 PRO C O doub N N 279 PRO C OXT sing N N 280 PRO CB CG sing N N 281 PRO CB HB2 sing N N 282 PRO CB HB3 sing N N 283 PRO CG CD sing N N 284 PRO CG HG2 sing N N 285 PRO CG HG3 sing N N 286 PRO CD HD2 sing N N 287 PRO CD HD3 sing N N 288 PRO OXT HXT sing N N 289 SER N CA sing N N 290 SER N H sing N N 291 SER N H2 sing N N 292 SER CA C sing N N 293 SER CA CB sing N N 294 SER CA HA sing N N 295 SER C O doub N N 296 SER C OXT sing N N 297 SER CB OG sing N N 298 SER CB HB2 sing N N 299 SER CB HB3 sing N N 300 SER OG HG sing N N 301 SER OXT HXT sing N N 302 THR N CA sing N N 303 THR N H sing N N 304 THR N H2 sing N N 305 THR CA C sing N N 306 THR CA CB sing N N 307 THR CA HA sing N N 308 THR C O doub N N 309 THR C OXT sing N N 310 THR CB OG1 sing N N 311 THR CB CG2 sing N N 312 THR CB HB sing N N 313 THR OG1 HG1 sing N N 314 THR CG2 HG21 sing N N 315 THR CG2 HG22 sing N N 316 THR CG2 HG23 sing N N 317 THR OXT HXT sing N N 318 TRP N CA sing N N 319 TRP N H sing N N 320 TRP N H2 sing N N 321 TRP CA C sing N N 322 TRP CA CB sing N N 323 TRP CA HA sing N N 324 TRP C O doub N N 325 TRP C OXT sing N N 326 TRP CB CG sing N N 327 TRP CB HB2 sing N N 328 TRP CB HB3 sing N N 329 TRP CG CD1 doub Y N 330 TRP CG CD2 sing Y N 331 TRP CD1 NE1 sing Y N 332 TRP CD1 HD1 sing N N 333 TRP CD2 CE2 doub Y N 334 TRP CD2 CE3 sing Y N 335 TRP NE1 CE2 sing Y N 336 TRP NE1 HE1 sing N N 337 TRP CE2 CZ2 sing Y N 338 TRP CE3 CZ3 doub Y N 339 TRP CE3 HE3 sing N N 340 TRP CZ2 CH2 doub Y N 341 TRP CZ2 HZ2 sing N N 342 TRP CZ3 CH2 sing Y N 343 TRP CZ3 HZ3 sing N N 344 TRP CH2 HH2 sing N N 345 TRP OXT HXT sing N N 346 TYR N CA sing N N 347 TYR N H sing N N 348 TYR N H2 sing N N 349 TYR CA C sing N N 350 TYR CA CB sing N N 351 TYR CA HA sing N N 352 TYR C O doub N N 353 TYR C OXT sing N N 354 TYR CB CG sing N N 355 TYR CB HB2 sing N N 356 TYR CB HB3 sing N N 357 TYR CG CD1 doub Y N 358 TYR CG CD2 sing Y N 359 TYR CD1 CE1 sing Y N 360 TYR CD1 HD1 sing N N 361 TYR CD2 CE2 doub Y N 362 TYR CD2 HD2 sing N N 363 TYR CE1 CZ doub Y N 364 TYR CE1 HE1 sing N N 365 TYR CE2 CZ sing Y N 366 TYR CE2 HE2 sing N N 367 TYR CZ OH sing N N 368 TYR OH HH sing N N 369 TYR OXT HXT sing N N 370 VAL N CA sing N N 371 VAL N H sing N N 372 VAL N H2 sing N N 373 VAL CA C sing N N 374 VAL CA CB sing N N 375 VAL CA HA sing N N 376 VAL C O doub N N 377 VAL C OXT sing N N 378 VAL CB CG1 sing N N 379 VAL CB CG2 sing N N 380 VAL CB HB sing N N 381 VAL CG1 HG11 sing N N 382 VAL CG1 HG12 sing N N 383 VAL CG1 HG13 sing N N 384 VAL CG2 HG21 sing N N 385 VAL CG2 HG22 sing N N 386 VAL CG2 HG23 sing N N 387 VAL OXT HXT sing N N 388 YMX C1 C2 doub Y N 389 YMX C1 C41 sing Y N 390 YMX C2 N3 sing Y N 391 YMX C2 C29 sing Y N 392 YMX N3 N4 sing Y N 393 YMX N4 C5 doub Y N 394 YMX C5 N6 sing N N 395 YMX C5 C29 sing Y N 396 YMX N6 C7 sing N N 397 YMX C7 O8 doub N N 398 YMX C7 C9 sing N N 399 YMX C9 C10 doub Y N 400 YMX C9 C21 sing Y N 401 YMX C10 C11 sing Y N 402 YMX C11 C12 doub Y N 403 YMX C12 N13 sing N N 404 YMX C12 C20 sing Y N 405 YMX N13 C14 sing N N 406 YMX N13 C19 sing N N 407 YMX C14 C15 sing N N 408 YMX C15 N16 sing N N 409 YMX N16 C17 sing N N 410 YMX N16 C18 sing N N 411 YMX C18 C19 sing N N 412 YMX C20 C21 doub Y N 413 YMX C21 N22 sing N N 414 YMX N22 C23 sing N N 415 YMX C23 C24 sing N N 416 YMX C23 C28 sing N N 417 YMX C24 C25 sing N N 418 YMX C25 O26 sing N N 419 YMX O26 C27 sing N N 420 YMX C27 C28 sing N N 421 YMX C29 C30 doub Y N 422 YMX C30 C31 sing Y N 423 YMX C31 C32 sing N N 424 YMX C31 C41 doub Y N 425 YMX C32 C33 sing N N 426 YMX C33 C34 doub Y N 427 YMX C33 C40 sing Y N 428 YMX C34 C35 sing Y N 429 YMX C35 F36 sing N N 430 YMX C35 C37 doub Y N 431 YMX C37 C38 sing Y N 432 YMX C38 F39 sing N N 433 YMX C38 C40 doub Y N 434 YMX C1 H1 sing N N 435 YMX C10 H10 sing N N 436 YMX C11 H11 sing N N 437 YMX C14 H14 sing N N 438 YMX C14 H14A sing N N 439 YMX C15 H15 sing N N 440 YMX C15 H15A sing N N 441 YMX C17 H17 sing N N 442 YMX C17 H17A sing N N 443 YMX C17 H17B sing N N 444 YMX C18 H18 sing N N 445 YMX C18 H18A sing N N 446 YMX C19 H19 sing N N 447 YMX C19 H19A sing N N 448 YMX C20 H20 sing N N 449 YMX N22 HN22 sing N N 450 YMX C23 H23 sing N N 451 YMX C24 H24 sing N N 452 YMX C24 H24A sing N N 453 YMX C25 H25 sing N N 454 YMX C25 H25A sing N N 455 YMX C27 H27 sing N N 456 YMX C27 H27A sing N N 457 YMX C28 H28 sing N N 458 YMX C28 H28A sing N N 459 YMX C30 H30 sing N N 460 YMX C32 H32 sing N N 461 YMX C32 H32A sing N N 462 YMX C34 H34 sing N N 463 YMX C37 H37 sing N N 464 YMX C40 H40 sing N N 465 YMX C41 H41 sing N N 466 YMX N6 H6 sing N N 467 YMX N3 H3 sing N N 468 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 Entrectinib YMX 3 GLYCEROL GOL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4PMP _pdbx_initial_refinement_model.details 'PDB ID: 4PMP' #