HEADER OXIDOREDUCTASE/INHIBITOR 26-JUL-16 5L01 TITLE TRYPTOPHAN 5-HYDROXYLASE IN COMPLEX WITH INHIBITOR (3~{S})-8-[2- TITLE 2 AZANYL-6-[(1~{R})-1-(4-CHLORANYL-2-PHENYL-PHENYL)-2,2,2- TITLE 3 TRIS(FLUORANYL)ETHOXY]PYRIMIDIN-4-YL]-2,8-DIAZASPIRO[4.5]DECANE-3- TITLE 4 CARBOXYLIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRYPTOPHAN 5-HYDROXYLASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TRYPTOPHAN 5-MONOOXYGENASE 1; COMPND 5 EC: 1.14.16.4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TPH1, TPH, TPRH, TRPH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: K-12 KEYWDS TPH1, IRON, ACYL, QUANIDINE, OXIDOREDUCTASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.J.STEIN,D.R.GOLDBERG,S.DE LOMBAERT,M.C.HOLT REVDAT 2 04-OCT-23 5L01 1 REMARK REVDAT 1 25-JAN-17 5L01 0 JRNL AUTH D.R.GOLDBERG,S.DE LOMBAERT,R.AIELLO,P.BOURASSA,N.BARUCCI, JRNL AUTH 2 Q.ZHANG,V.PARALKAR,A.J.STEIN,M.HOLT,J.VALENTINE,W.ZAVADOSKI JRNL TITL OPTIMIZATION OF SPIROCYCLIC PROLINE TRYPTOPHAN HYDROXYLASE-1 JRNL TITL 2 INHIBITORS. JRNL REF BIOORG. MED. CHEM. LETT. V. 27 413 2017 JRNL REFN ESSN 1464-3405 JRNL PMID 28041831 JRNL DOI 10.1016/J.BMCL.2016.12.053 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 22904 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1232 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1682 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE SET COUNT : 87 REMARK 3 BIN FREE R VALUE : 0.2940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2254 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 141 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.142 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.136 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.105 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.688 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2388 ; 0.018 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2206 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3242 ; 1.976 ; 1.986 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5093 ; 1.080 ; 3.009 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 289 ; 6.134 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 110 ;27.961 ;23.182 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 392 ;14.717 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;20.423 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 341 ; 0.118 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2667 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 572 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1141 ; 2.060 ; 2.295 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1140 ; 2.061 ; 2.296 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1423 ; 2.926 ; 3.424 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1424 ; 2.925 ; 3.424 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1247 ; 3.368 ; 2.671 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1248 ; 3.367 ; 2.671 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1816 ; 5.197 ; 3.856 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2804 ; 6.512 ;19.076 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2805 ; 6.511 ;19.082 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5L01 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1000222985. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24161 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5J6D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 18.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.05M CITRATE/0.05 M BIS REMARK 280 -TRIS PROPANE PH 7.6, 5% PEG 400, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.08350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ILE A 2 REMARK 465 GLU A 3 REMARK 465 ASP A 4 REMARK 465 ASN A 5 REMARK 465 LYS A 6 REMARK 465 GLU A 7 REMARK 465 ASN A 8 REMARK 465 LYS A 9 REMARK 465 ASP A 10 REMARK 465 HIS A 11 REMARK 465 SER A 12 REMARK 465 LEU A 13 REMARK 465 GLU A 14 REMARK 465 ARG A 15 REMARK 465 GLY A 16 REMARK 465 ARG A 17 REMARK 465 ALA A 18 REMARK 465 SER A 19 REMARK 465 LEU A 20 REMARK 465 ILE A 21 REMARK 465 PHE A 22 REMARK 465 SER A 23 REMARK 465 LEU A 24 REMARK 465 LYS A 25 REMARK 465 ASN A 26 REMARK 465 GLU A 27 REMARK 465 VAL A 28 REMARK 465 GLY A 29 REMARK 465 GLY A 30 REMARK 465 LEU A 31 REMARK 465 ILE A 32 REMARK 465 LYS A 33 REMARK 465 ALA A 34 REMARK 465 LEU A 35 REMARK 465 LYS A 36 REMARK 465 ILE A 37 REMARK 465 PHE A 38 REMARK 465 GLN A 39 REMARK 465 GLU A 40 REMARK 465 LYS A 41 REMARK 465 HIS A 42 REMARK 465 VAL A 43 REMARK 465 ASN A 44 REMARK 465 LEU A 45 REMARK 465 LEU A 46 REMARK 465 HIS A 47 REMARK 465 ILE A 48 REMARK 465 GLU A 49 REMARK 465 SER A 50 REMARK 465 ARG A 51 REMARK 465 LYS A 52 REMARK 465 SER A 53 REMARK 465 LYS A 54 REMARK 465 ARG A 55 REMARK 465 ARG A 56 REMARK 465 ASN A 57 REMARK 465 SER A 58 REMARK 465 GLU A 59 REMARK 465 PHE A 60 REMARK 465 GLU A 61 REMARK 465 ILE A 62 REMARK 465 PHE A 63 REMARK 465 VAL A 64 REMARK 465 ASP A 65 REMARK 465 CYS A 66 REMARK 465 ASP A 67 REMARK 465 ILE A 68 REMARK 465 ASN A 69 REMARK 465 ARG A 70 REMARK 465 GLU A 71 REMARK 465 GLN A 72 REMARK 465 LEU A 73 REMARK 465 ASN A 74 REMARK 465 ASP A 75 REMARK 465 ILE A 76 REMARK 465 PHE A 77 REMARK 465 HIS A 78 REMARK 465 LEU A 79 REMARK 465 LEU A 80 REMARK 465 LYS A 81 REMARK 465 SER A 82 REMARK 465 HIS A 83 REMARK 465 THR A 84 REMARK 465 ASN A 85 REMARK 465 VAL A 86 REMARK 465 LEU A 87 REMARK 465 SER A 88 REMARK 465 VAL A 89 REMARK 465 ASN A 90 REMARK 465 LEU A 91 REMARK 465 PRO A 92 REMARK 465 ASP A 93 REMARK 465 ASN A 94 REMARK 465 PHE A 95 REMARK 465 THR A 96 REMARK 465 LEU A 97 REMARK 465 LYS A 98 REMARK 465 GLU A 99 REMARK 465 ASP A 100 REMARK 465 GLY A 101 REMARK 465 MET A 102 REMARK 465 GLU A 103 REMARK 465 SER A 127 REMARK 465 GLU A 128 REMARK 465 LEU A 129 REMARK 465 ASP A 130 REMARK 465 ALA A 131 REMARK 465 ASP A 132 REMARK 465 HIS A 133 REMARK 465 PRO A 134 REMARK 465 ARG A 395 REMARK 465 PRO A 396 REMARK 465 PHE A 397 REMARK 465 GLY A 398 REMARK 465 VAL A 399 REMARK 465 LYS A 400 REMARK 465 TYR A 401 REMARK 465 ASN A 402 REMARK 465 PRO A 403 REMARK 465 TYR A 404 REMARK 465 THR A 405 REMARK 465 ARG A 406 REMARK 465 SER A 407 REMARK 465 ILE A 408 REMARK 465 GLN A 409 REMARK 465 ILE A 410 REMARK 465 LEU A 411 REMARK 465 LYS A 412 REMARK 465 ASP A 413 REMARK 465 THR A 414 REMARK 465 LYS A 415 REMARK 465 SER A 416 REMARK 465 ILE A 417 REMARK 465 THR A 418 REMARK 465 SER A 419 REMARK 465 ALA A 420 REMARK 465 MET A 421 REMARK 465 ASN A 422 REMARK 465 GLU A 423 REMARK 465 LEU A 424 REMARK 465 GLN A 425 REMARK 465 HIS A 426 REMARK 465 ASP A 427 REMARK 465 LEU A 428 REMARK 465 ASP A 429 REMARK 465 VAL A 430 REMARK 465 VAL A 431 REMARK 465 SER A 432 REMARK 465 ASP A 433 REMARK 465 ALA A 434 REMARK 465 LEU A 435 REMARK 465 ALA A 436 REMARK 465 LYS A 437 REMARK 465 VAL A 438 REMARK 465 SER A 439 REMARK 465 ARG A 440 REMARK 465 LYS A 441 REMARK 465 PRO A 442 REMARK 465 SER A 443 REMARK 465 ILE A 444 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 104 OG1 CG2 REMARK 470 ASN A 120 CG OD1 ND2 REMARK 470 ARG A 121 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 139 CG OD1 ND2 REMARK 470 LYS A 143 CG CD CE NZ REMARK 470 LYS A 146 CG CD CE NZ REMARK 470 LYS A 172 CG CD CE NZ REMARK 470 GLN A 179 CG CD OE1 NE2 REMARK 470 LYS A 322 CG CD CE NZ REMARK 470 LYS A 394 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 326 O HOH A 601 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 230 CG - CD - NE ANGL. DEV. = -15.4 DEGREES REMARK 500 ARG A 230 NE - CZ - NH2 ANGL. DEV. = -4.9 DEGREES REMARK 500 ARG A 248 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG A 248 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 328 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 315 -73.24 -118.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 272 NE2 REMARK 620 2 HIS A 277 NE2 94.1 REMARK 620 3 GLU A 317 OE1 151.2 92.4 REMARK 620 4 GLU A 317 OE2 91.0 98.1 60.3 REMARK 620 5 HOH A 627 O 101.0 85.2 107.6 167.3 REMARK 620 6 HOH A 655 O 92.8 166.2 87.3 93.8 81.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6Z4 A 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5J6D RELATED DB: PDB DBREF 5L01 A 1 444 UNP P17752 TPH1_HUMAN 1 444 SEQRES 1 A 444 MET ILE GLU ASP ASN LYS GLU ASN LYS ASP HIS SER LEU SEQRES 2 A 444 GLU ARG GLY ARG ALA SER LEU ILE PHE SER LEU LYS ASN SEQRES 3 A 444 GLU VAL GLY GLY LEU ILE LYS ALA LEU LYS ILE PHE GLN SEQRES 4 A 444 GLU LYS HIS VAL ASN LEU LEU HIS ILE GLU SER ARG LYS SEQRES 5 A 444 SER LYS ARG ARG ASN SER GLU PHE GLU ILE PHE VAL ASP SEQRES 6 A 444 CYS ASP ILE ASN ARG GLU GLN LEU ASN ASP ILE PHE HIS SEQRES 7 A 444 LEU LEU LYS SER HIS THR ASN VAL LEU SER VAL ASN LEU SEQRES 8 A 444 PRO ASP ASN PHE THR LEU LYS GLU ASP GLY MET GLU THR SEQRES 9 A 444 VAL PRO TRP PHE PRO LYS LYS ILE SER ASP LEU ASP HIS SEQRES 10 A 444 CYS ALA ASN ARG VAL LEU MET TYR GLY SER GLU LEU ASP SEQRES 11 A 444 ALA ASP HIS PRO GLY PHE LYS ASP ASN VAL TYR ARG LYS SEQRES 12 A 444 ARG ARG LYS TYR PHE ALA ASP LEU ALA MET ASN TYR LYS SEQRES 13 A 444 HIS GLY ASP PRO ILE PRO LYS VAL GLU PHE THR GLU GLU SEQRES 14 A 444 GLU ILE LYS THR TRP GLY THR VAL PHE GLN GLU LEU ASN SEQRES 15 A 444 LYS LEU TYR PRO THR HIS ALA CYS ARG GLU TYR LEU LYS SEQRES 16 A 444 ASN LEU PRO LEU LEU SER LYS TYR CYS GLY TYR ARG GLU SEQRES 17 A 444 ASP ASN ILE PRO GLN LEU GLU ASP VAL SER ASN PHE LEU SEQRES 18 A 444 LYS GLU ARG THR GLY PHE SER ILE ARG PRO VAL ALA GLY SEQRES 19 A 444 TYR LEU SER PRO ARG ASP PHE LEU SER GLY LEU ALA PHE SEQRES 20 A 444 ARG VAL PHE HIS CYS THR GLN TYR VAL ARG HIS SER SER SEQRES 21 A 444 ASP PRO PHE TYR THR PRO GLU PRO ASP THR CYS HIS GLU SEQRES 22 A 444 LEU LEU GLY HIS VAL PRO LEU LEU ALA GLU PRO SER PHE SEQRES 23 A 444 ALA GLN PHE SER GLN GLU ILE GLY LEU ALA SER LEU GLY SEQRES 24 A 444 ALA SER GLU GLU ALA VAL GLN LYS LEU ALA THR CYS TYR SEQRES 25 A 444 PHE PHE THR VAL GLU PHE GLY LEU CYS LYS GLN ASP GLY SEQRES 26 A 444 GLN LEU ARG VAL PHE GLY ALA GLY LEU LEU SER SER ILE SEQRES 27 A 444 SER GLU LEU LYS HIS ALA LEU SER GLY HIS ALA LYS VAL SEQRES 28 A 444 LYS PRO PHE ASP PRO LYS ILE THR CYS LYS GLN GLU CYS SEQRES 29 A 444 LEU ILE THR THR PHE GLN ASP VAL TYR PHE VAL SER GLU SEQRES 30 A 444 SER PHE GLU ASP ALA LYS GLU LYS MET ARG GLU PHE THR SEQRES 31 A 444 LYS THR ILE LYS ARG PRO PHE GLY VAL LYS TYR ASN PRO SEQRES 32 A 444 TYR THR ARG SER ILE GLN ILE LEU LYS ASP THR LYS SER SEQRES 33 A 444 ILE THR SER ALA MET ASN GLU LEU GLN HIS ASP LEU ASP SEQRES 34 A 444 VAL VAL SER ASP ALA LEU ALA LYS VAL SER ARG LYS PRO SEQRES 35 A 444 SER ILE HET FE A 501 1 HET 6Z4 A 502 39 HETNAM FE FE (III) ION HETNAM 6Z4 (3~{S})-8-[2-AZANYL-6-[(1~{R})-1-(4-CHLORANYL-2-PHENYL- HETNAM 2 6Z4 PHENYL)-2,2,2-TRIS(FLUORANYL)ETHOXY]PYRIMIDIN-4-YL]-2, HETNAM 3 6Z4 8-DIAZASPIRO[4.5]DECANE-3-CARBOXYLIC ACID FORMUL 2 FE FE 3+ FORMUL 3 6Z4 C27 H27 CL F3 N5 O3 FORMUL 4 HOH *141(H2 O) HELIX 1 AA1 LYS A 111 CYS A 118 5 8 HELIX 2 AA2 ASP A 138 TYR A 155 1 18 HELIX 3 AA3 THR A 167 ALA A 189 1 23 HELIX 4 AA4 CYS A 190 GLY A 205 1 16 HELIX 5 AA5 GLN A 213 GLY A 226 1 14 HELIX 6 AA6 SER A 237 ALA A 246 1 10 HELIX 7 AA7 ASP A 269 HIS A 277 1 9 HELIX 8 AA8 HIS A 277 ALA A 282 1 6 HELIX 9 AA9 GLU A 283 LEU A 298 1 16 HELIX 10 AB1 SER A 301 PHE A 314 1 14 HELIX 11 AB2 GLY A 331 SER A 336 1 6 HELIX 12 AB3 SER A 337 SER A 346 1 10 HELIX 13 AB4 ASP A 355 CYS A 360 1 6 HELIX 14 AB5 SER A 378 THR A 392 1 15 SHEET 1 AA1 2 SER A 228 PRO A 231 0 SHEET 2 AA1 2 VAL A 249 CYS A 252 1 O PHE A 250 N SER A 228 SHEET 1 AA2 4 GLN A 326 VAL A 329 0 SHEET 2 AA2 4 LEU A 320 GLN A 323 -1 N CYS A 321 O ARG A 328 SHEET 3 AA2 4 TYR A 373 SER A 376 1 O SER A 376 N LEU A 320 SHEET 4 AA2 4 VAL A 351 PRO A 353 1 N LYS A 352 O VAL A 375 LINK NE2 HIS A 272 FE FE A 501 1555 1555 2.02 LINK NE2 HIS A 277 FE FE A 501 1555 1555 2.07 LINK OE1 GLU A 317 FE FE A 501 1555 1555 2.25 LINK OE2 GLU A 317 FE FE A 501 1555 1555 2.09 LINK FE FE A 501 O HOH A 627 1555 1555 2.10 LINK FE FE A 501 O HOH A 655 1555 1555 1.99 SITE 1 AC1 5 HIS A 272 HIS A 277 GLU A 317 HOH A 627 SITE 2 AC1 5 HOH A 655 SITE 1 AC2 18 LEU A 236 ARG A 257 TYR A 264 THR A 265 SITE 2 AC2 18 PRO A 266 GLU A 267 PRO A 268 HIS A 272 SITE 3 AC2 18 ALA A 309 PHE A 313 GLU A 317 GLY A 333 SITE 4 AC2 18 SER A 336 SER A 337 CYS A 364 ILE A 366 SITE 5 AC2 18 HOH A 629 HOH A 655 CRYST1 47.302 58.167 56.678 90.00 97.49 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021141 0.000000 0.002778 0.00000 SCALE2 0.000000 0.017192 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017795 0.00000