HEADER TOXIN 29-JUL-16 5L21 TITLE CRYSTAL STRUCTURE OF BONT/A RECEPTOR BINDING DOMAIN IN COMPLEX WITH TITLE 2 VHH C2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BOTULINUM NEUROTOXIN TYPE A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BONT/A,BONTOXILYSIN-A,BOTOX; COMPND 5 EC: 3.4.24.69; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: VHH-C2; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM BOTULINUM (STRAIN HALL / ATCC 3502 SOURCE 3 / NCTC 13319 / TYPE A); SOURCE 4 ORGANISM_TAXID: 441771; SOURCE 5 STRAIN: HALL / ATCC 3502 / NCTC 13319 / TYPE A; SOURCE 6 GENE: BOTA, CBO0806, CLC_0862; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 11 ORGANISM_TAXID: 30538; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NEUTRALIZING ANTIBODY; VHH; BOTULINUM NEUROTOXIN; BONT-A-VHH COMPLEX, KEYWDS 2 TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR G.YAO,R.JIN REVDAT 4 04-OCT-23 5L21 1 REMARK REVDAT 3 11-DEC-19 5L21 1 REMARK REVDAT 2 20-FEB-19 5L21 1 JRNL REVDAT 1 09-AUG-17 5L21 0 JRNL AUTH G.YAO,K.H.LAM,J.WEISEMANN,L.PENG,N.KREZ,K.PERRY, JRNL AUTH 2 C.B.SHOEMAKER,M.DONG,A.RUMMEL,R.JIN JRNL TITL A CAMELID SINGLE-DOMAIN ANTIBODY NEUTRALIZES BOTULINUM JRNL TITL 2 NEUROTOXIN A BY BLOCKING HOST RECEPTOR BINDING. JRNL REF SCI REP V. 7 7438 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 28785006 JRNL DOI 10.1038/S41598-017-07457-5 REMARK 2 REMARK 2 RESOLUTION. 1.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 74540 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 3773 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.0000 - 5.0356 0.96 2561 151 0.1817 0.1908 REMARK 3 2 5.0356 - 3.9986 0.99 2658 118 0.1520 0.1773 REMARK 3 3 3.9986 - 3.4936 0.98 2598 141 0.1625 0.1753 REMARK 3 4 3.4936 - 3.1744 0.99 2623 129 0.1707 0.1760 REMARK 3 5 3.1744 - 2.9470 0.99 2593 134 0.1823 0.2117 REMARK 3 6 2.9470 - 2.7733 0.99 2660 132 0.1945 0.1971 REMARK 3 7 2.7733 - 2.6345 0.99 2599 151 0.1960 0.1904 REMARK 3 8 2.6345 - 2.5198 1.00 2617 163 0.1979 0.2317 REMARK 3 9 2.5198 - 2.4228 1.00 2623 148 0.1981 0.2233 REMARK 3 10 2.4228 - 2.3392 1.00 2628 133 0.2022 0.2238 REMARK 3 11 2.3392 - 2.2661 1.00 2614 136 0.2015 0.1825 REMARK 3 12 2.2661 - 2.2013 1.00 2667 119 0.1998 0.2165 REMARK 3 13 2.2013 - 2.1434 1.00 2625 155 0.2086 0.2174 REMARK 3 14 2.1434 - 2.0911 1.00 2572 146 0.2065 0.2061 REMARK 3 15 2.0911 - 2.0436 1.00 2689 140 0.2131 0.2436 REMARK 3 16 2.0436 - 2.0001 1.00 2591 135 0.2100 0.2332 REMARK 3 17 2.0001 - 1.9601 1.00 2657 125 0.2202 0.2255 REMARK 3 18 1.9601 - 1.9231 1.00 2596 134 0.2272 0.2424 REMARK 3 19 1.9231 - 1.8887 0.99 2636 134 0.2294 0.2314 REMARK 3 20 1.8887 - 1.8567 1.00 2597 155 0.2323 0.2248 REMARK 3 21 1.8567 - 1.8268 1.00 2653 139 0.2409 0.2404 REMARK 3 22 1.8268 - 1.7987 1.00 2579 140 0.2329 0.2641 REMARK 3 23 1.7987 - 1.7722 1.00 2657 148 0.2430 0.2520 REMARK 3 24 1.7722 - 1.7473 1.00 2599 152 0.2590 0.2501 REMARK 3 25 1.7473 - 1.7237 1.00 2561 148 0.2588 0.2510 REMARK 3 26 1.7237 - 1.7013 1.00 2657 140 0.2703 0.2221 REMARK 3 27 1.7013 - 1.6800 1.00 2657 127 0.2745 0.2693 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 4550 REMARK 3 ANGLE : 0.961 6149 REMARK 3 CHIRALITY : 0.073 653 REMARK 3 PLANARITY : 0.003 796 REMARK 3 DIHEDRAL : 12.738 1690 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 869 THROUGH 1101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.1894 0.1397 -5.2158 REMARK 3 T TENSOR REMARK 3 T11: 0.1130 T22: 0.1328 REMARK 3 T33: 0.1433 T12: -0.0180 REMARK 3 T13: -0.0072 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 0.3592 L22: 1.2288 REMARK 3 L33: 0.1347 L12: 0.1561 REMARK 3 L13: 0.0756 L23: -0.3033 REMARK 3 S TENSOR REMARK 3 S11: -0.0116 S12: 0.0293 S13: -0.0894 REMARK 3 S21: -0.2412 S22: 0.0568 S23: 0.0772 REMARK 3 S31: 0.0496 S32: -0.0486 S33: 0.0054 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1102 THROUGH 1296 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.3010 12.9782 25.7940 REMARK 3 T TENSOR REMARK 3 T11: 0.6657 T22: 0.2707 REMARK 3 T33: -0.0130 T12: -0.1058 REMARK 3 T13: -0.0601 T23: 0.0223 REMARK 3 L TENSOR REMARK 3 L11: 0.1473 L22: 0.1072 REMARK 3 L33: 0.1221 L12: 0.0478 REMARK 3 L13: -0.0561 L23: -0.0951 REMARK 3 S TENSOR REMARK 3 S11: 0.2042 S12: -0.2013 S13: 0.1209 REMARK 3 S21: 0.6508 S22: -0.1187 S23: -0.0169 REMARK 3 S31: -0.3281 S32: -0.0065 S33: 0.0806 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 7 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.1768 22.0426 14.0085 REMARK 3 T TENSOR REMARK 3 T11: 0.4452 T22: 0.4633 REMARK 3 T33: 0.8405 T12: -0.1227 REMARK 3 T13: -0.2163 T23: -0.1170 REMARK 3 L TENSOR REMARK 3 L11: 2.8990 L22: 1.6988 REMARK 3 L33: 3.7762 L12: 0.4250 REMARK 3 L13: -2.7259 L23: -1.8090 REMARK 3 S TENSOR REMARK 3 S11: 0.4217 S12: -0.8125 S13: 0.1965 REMARK 3 S21: 0.5808 S22: -0.2663 S23: -0.1505 REMARK 3 S31: -0.3260 S32: 0.5457 S33: -0.1603 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 8 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.7023 21.3539 -0.7136 REMARK 3 T TENSOR REMARK 3 T11: 0.0689 T22: 0.3399 REMARK 3 T33: 0.9389 T12: -0.0139 REMARK 3 T13: 0.0138 T23: 0.0402 REMARK 3 L TENSOR REMARK 3 L11: 2.0170 L22: 0.0717 REMARK 3 L33: 0.4850 L12: -0.0473 REMARK 3 L13: 0.2699 L23: 0.1735 REMARK 3 S TENSOR REMARK 3 S11: 0.0894 S12: 0.0250 S13: 0.1883 REMARK 3 S21: -0.0188 S22: 0.0014 S23: -0.2068 REMARK 3 S31: -0.0510 S32: 0.0844 S33: 0.0051 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 26 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.3633 11.9912 20.1955 REMARK 3 T TENSOR REMARK 3 T11: 0.7237 T22: 0.5536 REMARK 3 T33: 0.6467 T12: -0.2309 REMARK 3 T13: -0.3488 T23: 0.2327 REMARK 3 L TENSOR REMARK 3 L11: 4.9068 L22: 1.2136 REMARK 3 L33: 8.7679 L12: -2.4259 REMARK 3 L13: 2.4327 L23: -0.8739 REMARK 3 S TENSOR REMARK 3 S11: 0.1219 S12: -0.3368 S13: -0.2947 REMARK 3 S21: 0.4785 S22: -0.0538 S23: -0.1505 REMARK 3 S31: 0.1626 S32: -0.2176 S33: -0.0833 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 33 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.2504 16.9437 0.5348 REMARK 3 T TENSOR REMARK 3 T11: 0.0907 T22: 0.1762 REMARK 3 T33: 0.4690 T12: 0.0039 REMARK 3 T13: -0.0349 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 1.6285 L22: 2.6702 REMARK 3 L33: 0.5582 L12: -1.0382 REMARK 3 L13: 0.1423 L23: -0.1291 REMARK 3 S TENSOR REMARK 3 S11: 0.0263 S12: -0.1346 S13: -0.2925 REMARK 3 S21: 0.1494 S22: -0.0491 S23: -0.6705 REMARK 3 S31: -0.0253 S32: 0.0490 S33: 0.0354 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 68 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.3037 12.8970 -0.1982 REMARK 3 T TENSOR REMARK 3 T11: 0.1305 T22: 0.2590 REMARK 3 T33: 0.8216 T12: 0.0321 REMARK 3 T13: -0.0118 T23: 0.0566 REMARK 3 L TENSOR REMARK 3 L11: 1.4338 L22: 0.5486 REMARK 3 L33: 1.1257 L12: 0.1384 REMARK 3 L13: -0.5632 L23: 0.2179 REMARK 3 S TENSOR REMARK 3 S11: 0.1005 S12: -0.1628 S13: -0.3742 REMARK 3 S21: 0.0885 S22: 0.0687 S23: -0.5107 REMARK 3 S31: 0.0750 S32: 0.1435 S33: -0.1026 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 90 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.4890 22.3222 -0.2657 REMARK 3 T TENSOR REMARK 3 T11: 0.1339 T22: 0.2115 REMARK 3 T33: 0.5968 T12: -0.0159 REMARK 3 T13: -0.0559 T23: 0.0390 REMARK 3 L TENSOR REMARK 3 L11: 3.2605 L22: 2.7722 REMARK 3 L33: 2.5861 L12: 1.3868 REMARK 3 L13: -2.8676 L23: -1.5693 REMARK 3 S TENSOR REMARK 3 S11: 0.1489 S12: -0.0971 S13: 0.0957 REMARK 3 S21: 0.1646 S22: -0.1518 S23: -0.6980 REMARK 3 S31: -0.0806 S32: 0.2236 S33: -0.0405 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 112 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.0104 29.3312 -8.2349 REMARK 3 T TENSOR REMARK 3 T11: 0.2666 T22: 0.3583 REMARK 3 T33: 0.8888 T12: -0.0606 REMARK 3 T13: 0.1170 T23: 0.0494 REMARK 3 L TENSOR REMARK 3 L11: 6.1340 L22: 6.2234 REMARK 3 L33: 3.2202 L12: -0.5542 REMARK 3 L13: -0.0453 L23: 1.1406 REMARK 3 S TENSOR REMARK 3 S11: 0.0450 S12: 0.6652 S13: 0.3557 REMARK 3 S21: -0.7250 S22: 0.1211 S23: -1.2865 REMARK 3 S31: -0.3354 S32: 0.5060 S33: -0.1447 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5L21 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1000223087. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74608 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.680 REMARK 200 RESOLUTION RANGE LOW (A) : 35.990 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.04100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.71 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.41400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3FUO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% POLYETHYLENE GLYCOL 6,000; 100 MM REMARK 280 SODIUM ACETATE, PH 5.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 51.86000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1166 REMARK 465 SER A 1167 REMARK 465 GLY A 1168 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ASN A 1172 O HOH A 1301 2.04 REMARK 500 O TYR A 1107 O HOH A 1302 2.05 REMARK 500 O HOH A 1536 O HOH A 1622 2.06 REMARK 500 N ASN A 959 O HOH A 1303 2.06 REMARK 500 O HOH A 1303 O HOH A 1534 2.07 REMARK 500 OG SER A 1152 O HOH A 1304 2.07 REMARK 500 OE1 GLU A 1190 O HOH A 1305 2.08 REMARK 500 O HOH A 1595 O HOH A 1705 2.09 REMARK 500 O HOH A 1459 O HOH A 1626 2.10 REMARK 500 O HOH A 1704 O HOH A 1745 2.10 REMARK 500 O HOH A 1403 O HOH A 1700 2.11 REMARK 500 O GLY A 1157 O HOH A 1306 2.12 REMARK 500 O HOH A 1405 O HOH A 1624 2.12 REMARK 500 O HOH A 1314 O HOH A 1632 2.14 REMARK 500 O HOH A 1327 O HOH A 1705 2.14 REMARK 500 O HOH A 1687 O HOH A 1705 2.14 REMARK 500 O HOH A 1559 O HOH A 1688 2.15 REMARK 500 O HOH A 1733 O HOH A 1746 2.15 REMARK 500 O HOH A 1476 O HOH A 1672 2.15 REMARK 500 OD2 ASP A 1124 O HOH A 1307 2.16 REMARK 500 O HOH B 285 O HOH B 286 2.16 REMARK 500 O HOH A 1401 O HOH A 1675 2.16 REMARK 500 O GLY B 28 O HOH B 201 2.16 REMARK 500 O HOH A 1504 O HOH A 1712 2.16 REMARK 500 O HOH A 1383 O HOH B 289 2.19 REMARK 500 O HOH A 1724 O HOH A 1732 2.19 REMARK 500 O HOH B 296 O HOH B 304 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1748 O HOH B 316 2645 2.10 REMARK 500 O HOH A 1326 O HOH B 271 2645 2.16 REMARK 500 O HOH A 1741 O HOH B 250 1455 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 885 54.07 38.94 REMARK 500 ASN A 886 5.40 81.78 REMARK 500 ASP A 910 89.23 -153.88 REMARK 500 MET A1004 79.19 -102.85 REMARK 500 ASN A1025 -93.19 -145.14 REMARK 500 LYS A1056 137.42 -172.76 REMARK 500 ASP A1076 41.19 -95.24 REMARK 500 ASN A1147 -2.11 70.27 REMARK 500 GLN A1219 -17.40 -152.02 REMARK 500 ASP A1241 -166.55 -79.95 REMARK 500 ASN A1256 -102.96 54.91 REMARK 500 ALA B 98 165.40 179.51 REMARK 500 SER B 118 -172.69 -64.44 REMARK 500 REMARK 500 REMARK: NULL DBREF 5L21 A 872 1296 UNP A5HZZ9 BXA1_CLOBH 872 1296 DBREF 5L21 B 1 119 PDB 5L21 5L21 1 119 SEQADV 5L21 GLY A 869 UNP A5HZZ9 CLONING ARTIFACT SEQADV 5L21 PRO A 870 UNP A5HZZ9 CLONING ARTIFACT SEQADV 5L21 MET A 871 UNP A5HZZ9 CLONING ARTIFACT SEQADV 5L21 ALA A 1158 UNP A5HZZ9 THR 1158 ENGINEERED MUTATION SEQRES 1 A 428 GLY PRO MET ASN ILE ILE ASN THR SER ILE LEU ASN LEU SEQRES 2 A 428 ARG TYR GLU SER ASN HIS LEU ILE ASP LEU SER ARG TYR SEQRES 3 A 428 ALA SER LYS ILE ASN ILE GLY SER LYS VAL ASN PHE ASP SEQRES 4 A 428 PRO ILE ASP LYS ASN GLN ILE GLN LEU PHE ASN LEU GLU SEQRES 5 A 428 SER SER LYS ILE GLU VAL ILE LEU LYS ASN ALA ILE VAL SEQRES 6 A 428 TYR ASN SER MET TYR GLU ASN PHE SER THR SER PHE TRP SEQRES 7 A 428 ILE ARG ILE PRO LYS TYR PHE ASN SER ILE SER LEU ASN SEQRES 8 A 428 ASN GLU TYR THR ILE ILE ASN CYS MET GLU ASN ASN SER SEQRES 9 A 428 GLY TRP LYS VAL SER LEU ASN TYR GLY GLU ILE ILE TRP SEQRES 10 A 428 THR LEU GLN ASP THR GLN GLU ILE LYS GLN ARG VAL VAL SEQRES 11 A 428 PHE LYS TYR SER GLN MET ILE ASN ILE SER ASP TYR ILE SEQRES 12 A 428 ASN ARG TRP ILE PHE VAL THR ILE THR ASN ASN ARG LEU SEQRES 13 A 428 ASN ASN SER LYS ILE TYR ILE ASN GLY ARG LEU ILE ASP SEQRES 14 A 428 GLN LYS PRO ILE SER ASN LEU GLY ASN ILE HIS ALA SER SEQRES 15 A 428 ASN ASN ILE MET PHE LYS LEU ASP GLY CYS ARG ASP THR SEQRES 16 A 428 HIS ARG TYR ILE TRP ILE LYS TYR PHE ASN LEU PHE ASP SEQRES 17 A 428 LYS GLU LEU ASN GLU LYS GLU ILE LYS ASP LEU TYR ASP SEQRES 18 A 428 ASN GLN SER ASN SER GLY ILE LEU LYS ASP PHE TRP GLY SEQRES 19 A 428 ASP TYR LEU GLN TYR ASP LYS PRO TYR TYR MET LEU ASN SEQRES 20 A 428 LEU TYR ASP PRO ASN LYS TYR VAL ASP VAL ASN ASN VAL SEQRES 21 A 428 GLY ILE ARG GLY TYR MET TYR LEU LYS GLY PRO ARG GLY SEQRES 22 A 428 SER VAL MET THR THR ASN ILE TYR LEU ASN SER SER LEU SEQRES 23 A 428 TYR ARG GLY ALA LYS PHE ILE ILE LYS LYS TYR ALA SER SEQRES 24 A 428 GLY ASN LYS ASP ASN ILE VAL ARG ASN ASN ASP ARG VAL SEQRES 25 A 428 TYR ILE ASN VAL VAL VAL LYS ASN LYS GLU TYR ARG LEU SEQRES 26 A 428 ALA THR ASN ALA SER GLN ALA GLY VAL GLU LYS ILE LEU SEQRES 27 A 428 SER ALA LEU GLU ILE PRO ASP VAL GLY ASN LEU SER GLN SEQRES 28 A 428 VAL VAL VAL MET LYS SER LYS ASN ASP GLN GLY ILE THR SEQRES 29 A 428 ASN LYS CYS LYS MET ASN LEU GLN ASP ASN ASN GLY ASN SEQRES 30 A 428 ASP ILE GLY PHE ILE GLY PHE HIS GLN PHE ASN ASN ILE SEQRES 31 A 428 ALA LYS LEU VAL ALA SER ASN TRP TYR ASN ARG GLN ILE SEQRES 32 A 428 GLU ARG SER SER ARG THR LEU GLY CYS SER TRP GLU PHE SEQRES 33 A 428 ILE PRO VAL ASP ASP GLY TRP GLY GLU ARG PRO LEU SEQRES 1 B 119 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU ALA GLN SEQRES 2 B 119 PRO GLY GLY SER LEU ARG LEU SER CYS GLU ALA SER GLY SEQRES 3 B 119 PHE GLY THR TRP PHE ARG PHE ASP GLU ASN THR VAL ASN SEQRES 4 B 119 TRP TYR ARG GLN PRO PRO GLY LYS SER ARG GLU PHE ASP SEQRES 5 B 119 GLU LEU VAL ALA ARG TYR PRO LYS SER GLY ILE VAL THR SEQRES 6 B 119 TYR LEU ASP SER VAL LYS GLY ARG PHE THR ILE SER ARG SEQRES 7 B 119 ASP ASN ALA LYS LYS MET ALA PHE LEU GLN MET ASP ASN SEQRES 8 B 119 LEU LYS PRO GLU ASP THR ALA VAL TYR TYR CYS ASN VAL SEQRES 9 B 119 GLY GLU PHE TRP GLY GLN GLY THR GLN VAL THR ILE SER SEQRES 10 B 119 SER GLU FORMUL 3 HOH *566(H2 O) HELIX 1 AA1 MET A 871 THR A 876 1 6 HELIX 2 AA2 LYS A 929 VAL A 933 5 5 HELIX 3 AA3 ASN A 954 LEU A 958 5 5 HELIX 4 AA4 ASN A 1080 SER A 1092 1 13 HELIX 5 AA5 GLU A 1210 VAL A 1214 5 5 HELIX 6 AA6 ASN A 1265 SER A 1274 1 10 HELIX 7 AA7 ARG B 32 ASN B 36 5 5 HELIX 8 AA8 SER B 48 ASP B 52 5 5 HELIX 9 AA9 ASP B 68 LYS B 71 5 4 HELIX 10 AB1 LYS B 93 THR B 97 5 5 SHEET 1 AA1 5 HIS A 887 ASP A 890 0 SHEET 2 AA1 5 LEU A 879 GLU A 884 -1 N GLU A 884 O HIS A 887 SHEET 3 AA1 5 TYR A1066 PHE A1075 -1 O PHE A1072 N LEU A 881 SHEET 4 AA1 5 ILE A 914 PHE A 917 -1 N ILE A 914 O ILE A1069 SHEET 5 AA1 5 ASN A 905 PHE A 906 -1 N ASN A 905 O GLN A 915 SHEET 1 AA2 7 HIS A 887 ASP A 890 0 SHEET 2 AA2 7 LEU A 879 GLU A 884 -1 N GLU A 884 O HIS A 887 SHEET 3 AA2 7 TYR A1066 PHE A1075 -1 O PHE A1072 N LEU A 881 SHEET 4 AA2 7 PHE A 941 ARG A 948 -1 N TRP A 946 O LYS A1070 SHEET 5 AA2 7 ILE A1015 ASN A1021 -1 O VAL A1017 N PHE A 945 SHEET 6 AA2 7 ASN A1026 ILE A1031 -1 O TYR A1030 N THR A1018 SHEET 7 AA2 7 ARG A1034 PRO A1040 -1 O ILE A1036 N ILE A1029 SHEET 1 AA3 7 LYS A 897 ILE A 900 0 SHEET 2 AA3 7 ILE A 924 ILE A 927 -1 O ILE A 927 N LYS A 897 SHEET 3 AA3 7 ASN A1052 ASP A1058 -1 O PHE A1055 N ILE A 924 SHEET 4 AA3 7 TYR A 962 GLU A 969 -1 N THR A 963 O ASP A1058 SHEET 5 AA3 7 SER A 972 ASN A 979 -1 O VAL A 976 N ILE A 964 SHEET 6 AA3 7 GLU A 982 GLN A 988 -1 O ILE A 984 N SER A 977 SHEET 7 AA3 7 LYS A 994 LYS A1000 -1 O VAL A 997 N TRP A 985 SHEET 1 AA4 2 ASN A 935 SER A 936 0 SHEET 2 AA4 2 ILE A1047 HIS A1048 -1 O ILE A1047 N SER A 936 SHEET 1 AA5 8 LYS A1204 ILE A1205 0 SHEET 2 AA5 8 ILE A1258 SER A1264 -1 O ALA A1263 N LYS A1204 SHEET 3 AA5 8 ASP A1246 PHE A1255 -1 N GLY A1251 O VAL A1262 SHEET 4 AA5 8 MET A1237 GLN A1240 -1 N MET A1237 O ILE A1250 SHEET 5 AA5 8 VAL A1220 MET A1223 -1 N VAL A1220 O GLN A1240 SHEET 6 AA5 8 ARG A1179 VAL A1186 -1 N VAL A1180 O VAL A1221 SHEET 7 AA5 8 LYS A1189 ALA A1194 -1 O LYS A1189 N VAL A1186 SHEET 8 AA5 8 SER A1207 LEU A1209 -1 O SER A1207 N ALA A1194 SHEET 1 AA6 9 LYS A1204 ILE A1205 0 SHEET 2 AA6 9 ILE A1258 SER A1264 -1 O ALA A1263 N LYS A1204 SHEET 3 AA6 9 ASP A1246 PHE A1255 -1 N GLY A1251 O VAL A1262 SHEET 4 AA6 9 MET A1237 GLN A1240 -1 N MET A1237 O ILE A1250 SHEET 5 AA6 9 VAL A1220 MET A1223 -1 N VAL A1220 O GLN A1240 SHEET 6 AA6 9 ARG A1179 VAL A1186 -1 N VAL A1180 O VAL A1221 SHEET 7 AA6 9 PHE A1160 LYS A1164 -1 N ILE A1161 O ASN A1183 SHEET 8 AA6 9 PRO A1110 ASN A1115 -1 N TYR A1111 O PHE A1160 SHEET 9 AA6 9 TRP A1282 ILE A1285 -1 O ILE A1285 N TYR A1112 SHEET 1 AA7 2 TYR A1122 VAL A1125 0 SHEET 2 AA7 2 MET A1134 LYS A1137 -1 O LYS A1137 N TYR A1122 SHEET 1 AA8 2 SER A1142 THR A1145 0 SHEET 2 AA8 2 TYR A1149 SER A1152 -1 O ASN A1151 N VAL A1143 SHEET 1 AA9 4 GLN B 3 SER B 7 0 SHEET 2 AA9 4 LEU B 18 SER B 25 -1 O SER B 21 N SER B 7 SHEET 3 AA9 4 MET B 84 MET B 89 -1 O MET B 89 N LEU B 18 SHEET 4 AA9 4 PHE B 74 ASP B 79 -1 N THR B 75 O GLN B 88 SHEET 1 AB1 6 GLY B 10 ALA B 12 0 SHEET 2 AB1 6 THR B 112 ILE B 116 1 O GLN B 113 N GLY B 10 SHEET 3 AB1 6 ALA B 98 VAL B 104 -1 N TYR B 100 O THR B 112 SHEET 4 AB1 6 VAL B 38 GLN B 43 -1 N ASN B 39 O ASN B 103 SHEET 5 AB1 6 GLU B 53 TYR B 58 -1 O GLU B 53 N ARG B 42 SHEET 6 AB1 6 THR B 65 TYR B 66 -1 O THR B 65 N ARG B 57 SHEET 1 AB2 4 GLY B 10 ALA B 12 0 SHEET 2 AB2 4 THR B 112 ILE B 116 1 O GLN B 113 N GLY B 10 SHEET 3 AB2 4 ALA B 98 VAL B 104 -1 N TYR B 100 O THR B 112 SHEET 4 AB2 4 PHE B 107 TRP B 108 -1 O PHE B 107 N VAL B 104 SSBOND 1 CYS A 1235 CYS A 1280 1555 1555 2.04 SSBOND 2 CYS B 22 CYS B 102 1555 1555 2.07 CISPEP 1 GLY A 1138 PRO A 1139 0 -1.70 CRYST1 50.100 103.720 64.700 90.00 93.77 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019960 0.000000 0.001315 0.00000 SCALE2 0.000000 0.009641 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015489 0.00000