HEADER TRANSPORT PROTEIN 31-JUL-16 5L24 TITLE STRUCTURE OF CNTNW N149L IN THE INTERMEDIATE 2 STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOSIDE PERMEASE; COMPND 3 CHAIN: A, C, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEISSERIA WADSWORTHII 9715; SOURCE 3 ORGANISM_TAXID: 1030841; SOURCE 4 GENE: NUPC, HMPREF9370_1765; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: C41; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET26B KEYWDS TRANSPORTER, NUCLEOSIDE, ELEVATOR-TYPE ALTERNATE ACCESS, TRANSPORT KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.HIRSCHI,Z.L.JOHNSON,S.-Y.LEE REVDAT 6 04-OCT-23 5L24 1 REMARK REVDAT 5 25-DEC-19 5L24 1 REMARK REVDAT 4 20-SEP-17 5L24 1 REMARK REVDAT 3 10-MAY-17 5L24 1 JRNL REVDAT 2 03-MAY-17 5L24 1 JRNL REVDAT 1 12-APR-17 5L24 0 JRNL AUTH M.HIRSCHI,Z.L.JOHNSON,S.Y.LEE JRNL TITL VISUALIZING MULTISTEP ELEVATOR-LIKE TRANSITIONS OF A JRNL TITL 2 NUCLEOSIDE TRANSPORTER. JRNL REF NATURE V. 545 66 2017 JRNL REFN ISSN 0028-0836 JRNL PMID 28424521 JRNL DOI 10.1038/NATURE22057 REMARK 2 REMARK 2 RESOLUTION. 4.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 16180 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.273 REMARK 3 R VALUE (WORKING SET) : 0.271 REMARK 3 FREE R VALUE : 0.299 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1141 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.6442 - 8.1741 0.99 1908 144 0.2406 0.2708 REMARK 3 2 8.1741 - 6.4999 1.00 1896 147 0.2474 0.2786 REMARK 3 3 6.4999 - 5.6817 1.00 1923 149 0.3073 0.3240 REMARK 3 4 5.6817 - 5.1638 1.00 1895 136 0.2991 0.3716 REMARK 3 5 5.1638 - 4.7945 1.00 1889 149 0.2699 0.2799 REMARK 3 6 4.7945 - 4.5124 1.00 1915 140 0.2619 0.3154 REMARK 3 7 4.5124 - 4.2867 1.00 1879 148 0.2714 0.2790 REMARK 3 8 4.2867 - 4.1004 0.90 1734 128 0.3262 0.3254 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.540 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 8891 REMARK 3 ANGLE : 1.059 12104 REMARK 3 CHIRALITY : 0.049 1521 REMARK 3 PLANARITY : 0.004 1494 REMARK 3 DIHEDRAL : 8.321 2953 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5L24 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1000223076. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM 7.2.1 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16202 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.100 REMARK 200 RESOLUTION RANGE LOW (A) : 37.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 11.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.11 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.4 REMARK 200 DATA REDUNDANCY IN SHELL : 9.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5L26 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM MG(OAC)2, 30% PEG400, PH 7.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 91.52000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 183.04000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 137.28000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 228.80000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 45.76000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 48770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -101.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -5 REMARK 465 PRO A -4 REMARK 465 ALA A -3 REMARK 465 VAL A -2 REMARK 465 PRO A -1 REMARK 465 ARG A 0 REMARK 465 ALA A 421 REMARK 465 SER A 422 REMARK 465 VAL A 423 REMARK 465 LEU A 424 REMARK 465 GLY A 425 REMARK 465 GLY C -5 REMARK 465 PRO C -4 REMARK 465 ALA C -3 REMARK 465 VAL C -2 REMARK 465 PRO C -1 REMARK 465 ARG C 0 REMARK 465 MET C 1 REMARK 465 VAL C 2 REMARK 465 VAL C 3 REMARK 465 GLN C 51 REMARK 465 GLY C 52 REMARK 465 ARG C 53 REMARK 465 VAL C 233 REMARK 465 LEU C 234 REMARK 465 ALA C 235 REMARK 465 GLU C 236 REMARK 465 ASN C 237 REMARK 465 GLU C 238 REMARK 465 ASP C 239 REMARK 465 GLU C 346 REMARK 465 ALA C 347 REMARK 465 ALA C 348 REMARK 465 VAL C 349 REMARK 465 GLY C 417 REMARK 465 LEU C 418 REMARK 465 SER C 419 REMARK 465 GLY C 420 REMARK 465 ALA C 421 REMARK 465 SER C 422 REMARK 465 VAL C 423 REMARK 465 LEU C 424 REMARK 465 GLY C 425 REMARK 465 GLY B -5 REMARK 465 PRO B -4 REMARK 465 ALA B -3 REMARK 465 VAL B -2 REMARK 465 PRO B -1 REMARK 465 ARG B 0 REMARK 465 MET B 1 REMARK 465 ASN B 229 REMARK 465 ASP B 230 REMARK 465 ALA B 231 REMARK 465 GLU B 232 REMARK 465 VAL B 233 REMARK 465 LEU B 234 REMARK 465 ALA B 235 REMARK 465 GLU B 236 REMARK 465 ASN B 237 REMARK 465 GLU B 238 REMARK 465 ASP B 239 REMARK 465 GLU B 240 REMARK 465 SER B 422 REMARK 465 VAL B 423 REMARK 465 LEU B 424 REMARK 465 GLY B 425 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 VAL A 2 CG1 CG2 REMARK 470 ARG A 53 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 54 CG OD1 OD2 REMARK 470 MET A 55 CG SD CE REMARK 470 LYS A 61 CG CD CE NZ REMARK 470 ARG A 167 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 226 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 229 CG OD1 ND2 REMARK 470 ASP A 230 CG OD1 OD2 REMARK 470 GLU A 232 CG CD OE1 OE2 REMARK 470 VAL A 233 CG1 CG2 REMARK 470 LEU A 234 CG CD1 CD2 REMARK 470 ASN A 237 CG OD1 ND2 REMARK 470 GLU A 238 CG CD OE1 OE2 REMARK 470 GLU A 240 CG CD OE1 OE2 REMARK 470 LYS A 241 CG CD CE NZ REMARK 470 SER A 419 OG REMARK 470 LEU C 4 CG CD1 CD2 REMARK 470 ASP C 23 CG OD1 OD2 REMARK 470 ARG C 24 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 25 CG CD CE NZ REMARK 470 ARG C 30 CG CD NE CZ NH1 NH2 REMARK 470 LEU C 45 CG CD1 CD2 REMARK 470 LEU C 47 CG CD1 CD2 REMARK 470 ASP C 54 CG OD1 OD2 REMARK 470 LYS C 126 CG CD CE NZ REMARK 470 LEU C 132 CD1 CD2 REMARK 470 GLN C 133 CD OE1 NE2 REMARK 470 LYS C 134 CG CD CE NZ REMARK 470 LYS C 140 CE NZ REMARK 470 GLU C 142 CG CD OE1 OE2 REMARK 470 ARG C 166 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 167 CG CD NE CZ NH1 NH2 REMARK 470 MET C 168 CG SD CE REMARK 470 GLU C 170 CG CD OE1 OE2 REMARK 470 VAL C 188 CG1 CG2 REMARK 470 LEU C 189 CG CD1 CD2 REMARK 470 TYR C 192 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS C 218 CG CD CE NZ REMARK 470 GLU C 223 CG CD OE1 OE2 REMARK 470 GLU C 225 CG CD OE1 OE2 REMARK 470 ARG C 226 CG CD NE CZ NH1 NH2 REMARK 470 ASN C 229 CG OD1 ND2 REMARK 470 ASP C 230 CG OD1 OD2 REMARK 470 GLU C 232 CG CD OE1 OE2 REMARK 470 PHE C 288 CG CD1 CD2 CE1 CE2 CZ REMARK 470 HIS C 290 CG ND1 CD2 CE1 NE2 REMARK 470 LEU C 293 CG CD1 CD2 REMARK 470 TRP C 301 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP C 301 CZ3 CH2 REMARK 470 TRP C 308 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP C 308 CZ3 CH2 REMARK 470 LYS C 341 CG CD CE NZ REMARK 470 LYS C 344 CG CD CE NZ REMARK 470 GLN C 350 CG CD OE1 NE2 REMARK 470 THR C 354 OG1 CG2 REMARK 470 THR C 355 OG1 CG2 REMARK 470 LYS C 356 CG CD CE NZ REMARK 470 ILE C 358 CG1 CG2 CD1 REMARK 470 ILE C 359 CG1 CG2 CD1 REMARK 470 SER C 360 OG REMARK 470 LEU C 363 CG CD1 CD2 REMARK 470 LYS C 385 CD CE NZ REMARK 470 THR C 416 OG1 CG2 REMARK 470 ARG B 24 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 29 CG1 CG2 CD1 REMARK 470 ARG B 30 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 58 CG CD OE1 OE2 REMARK 470 MET B 144 CG SD CE REMARK 470 LEU B 149 CG CD1 CD2 REMARK 470 MET B 168 CG SD CE REMARK 470 ARG B 226 CD NE CZ NH1 NH2 REMARK 470 LYS B 241 CG CD CE NZ REMARK 470 TRP B 301 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 301 CZ3 CH2 REMARK 470 GLU B 338 CG CD OE1 OE2 REMARK 470 LYS B 341 CG CD CE NZ REMARK 470 LYS B 344 CG CD CE NZ REMARK 470 ARG B 386 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 418 CG CD1 CD2 REMARK 470 SER B 419 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR C 116 CG1 VAL C 160 1.59 REMARK 500 O VAL A 334 OG SER A 337 2.13 REMARK 500 O GLU B 142 OG SER B 145 2.16 REMARK 500 OG1 THR B 138 OE2 GLU B 142 2.16 REMARK 500 O PHE B 107 OG SER B 110 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 47 -61.81 -128.59 REMARK 500 VAL A 101 -68.84 -99.07 REMARK 500 LEU A 159 18.55 57.37 REMARK 500 PRO A 222 -178.97 -61.85 REMARK 500 ASN A 229 -132.46 61.37 REMARK 500 ALA A 231 -72.58 -55.11 REMARK 500 VAL A 233 -63.99 -128.74 REMARK 500 ASP A 239 -139.69 56.73 REMARK 500 THR A 243 -73.00 -82.55 REMARK 500 ILE A 330 -77.93 -121.86 REMARK 500 ASN A 331 -175.24 -170.77 REMARK 500 LEU A 418 -73.24 -86.78 REMARK 500 LYS C 25 -72.24 -57.43 REMARK 500 LEU C 47 -67.69 -123.50 REMARK 500 MET C 55 -71.10 -55.98 REMARK 500 PHE C 90 -74.75 -82.61 REMARK 500 ARG C 167 71.04 54.75 REMARK 500 GLU C 170 -9.74 62.77 REMARK 500 SER C 171 -61.86 -99.50 REMARK 500 SER C 187 -71.12 -46.84 REMARK 500 LEU C 215 -70.82 -55.26 REMARK 500 THR C 224 -64.57 -132.70 REMARK 500 THR C 227 -62.00 -128.82 REMARK 500 THR C 243 -117.78 58.62 REMARK 500 ILE C 330 -74.39 -76.04 REMARK 500 ASN C 331 177.07 175.13 REMARK 500 VAL B 89 -75.68 -121.77 REMARK 500 ARG B 100 -62.96 -92.67 REMARK 500 ARG B 166 -70.31 -48.26 REMARK 500 THR B 224 -61.44 -92.99 REMARK 500 THR B 243 -72.99 -82.16 REMARK 500 ILE B 330 -79.74 -120.83 REMARK 500 ASN B 331 177.47 174.63 REMARK 500 PRO B 345 48.08 -88.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 6ZL B 501 REMARK 610 6ZL B 502 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6ZL B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6ZL B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5L27 RELATED DB: PDB REMARK 900 RELATED ID: 5L26 RELATED DB: PDB REMARK 900 RELATED ID: 5L28 RELATED DB: PDB REMARK 900 RELATED ID: 5L29 RELATED DB: PDB REMARK 900 RELATED ID: 5L2A RELATED DB: PDB REMARK 900 RELATED ID: 5L2B RELATED DB: PDB DBREF 5L24 A 1 425 UNP G4CRQ5 G4CRQ5_9NEIS 1 425 DBREF 5L24 C 1 425 UNP G4CRQ5 G4CRQ5_9NEIS 1 425 DBREF 5L24 B 1 425 UNP G4CRQ5 G4CRQ5_9NEIS 1 425 SEQADV 5L24 GLY A -5 UNP G4CRQ5 EXPRESSION TAG SEQADV 5L24 PRO A -4 UNP G4CRQ5 EXPRESSION TAG SEQADV 5L24 ALA A -3 UNP G4CRQ5 EXPRESSION TAG SEQADV 5L24 VAL A -2 UNP G4CRQ5 EXPRESSION TAG SEQADV 5L24 PRO A -1 UNP G4CRQ5 EXPRESSION TAG SEQADV 5L24 ARG A 0 UNP G4CRQ5 EXPRESSION TAG SEQADV 5L24 LEU A 149 UNP G4CRQ5 ASN 149 ENGINEERED MUTATION SEQADV 5L24 GLY C -5 UNP G4CRQ5 EXPRESSION TAG SEQADV 5L24 PRO C -4 UNP G4CRQ5 EXPRESSION TAG SEQADV 5L24 ALA C -3 UNP G4CRQ5 EXPRESSION TAG SEQADV 5L24 VAL C -2 UNP G4CRQ5 EXPRESSION TAG SEQADV 5L24 PRO C -1 UNP G4CRQ5 EXPRESSION TAG SEQADV 5L24 ARG C 0 UNP G4CRQ5 EXPRESSION TAG SEQADV 5L24 LEU C 149 UNP G4CRQ5 ASN 149 ENGINEERED MUTATION SEQADV 5L24 GLY B -5 UNP G4CRQ5 EXPRESSION TAG SEQADV 5L24 PRO B -4 UNP G4CRQ5 EXPRESSION TAG SEQADV 5L24 ALA B -3 UNP G4CRQ5 EXPRESSION TAG SEQADV 5L24 VAL B -2 UNP G4CRQ5 EXPRESSION TAG SEQADV 5L24 PRO B -1 UNP G4CRQ5 EXPRESSION TAG SEQADV 5L24 ARG B 0 UNP G4CRQ5 EXPRESSION TAG SEQADV 5L24 LEU B 149 UNP G4CRQ5 ASN 149 ENGINEERED MUTATION SEQRES 1 A 431 GLY PRO ALA VAL PRO ARG MET VAL VAL LEU HIS SER LEU SEQRES 2 A 431 LEU GLY MET ALA VAL LEU ILE ALA ILE ALA VAL LEU LEU SEQRES 3 A 431 SER THR ASP ARG LYS ALA ILE ASN ILE ARG THR VAL ALA SEQRES 4 A 431 GLY ALA PHE LEU ILE GLN VAL ALA LEU GLY ALA LEU VAL SEQRES 5 A 431 LEU TYR VAL PRO GLN GLY ARG ASP MET LEU GLY GLU ALA SEQRES 6 A 431 SER LYS THR ILE SER ASN VAL ILE ALA TYR GLY ASN ASN SEQRES 7 A 431 GLY VAL ASP PHE LEU PHE GLY GLY LEU VAL SER GLU LYS SEQRES 8 A 431 MET PHE GLU VAL PHE GLY GLY GLY GLY PHE VAL PHE ALA SEQRES 9 A 431 LEU ARG VAL LEU PRO MET ILE VAL PHE PHE SER SER LEU SEQRES 10 A 431 MET ALA VAL LEU TYR TYR ILE GLY VAL MET GLN LEU LEU SEQRES 11 A 431 ILE LYS VAL ILE GLY GLY PHE LEU GLN LYS MET LEU GLY SEQRES 12 A 431 THR SER LYS ALA GLU SER MET SER ALA ALA ALA LEU ILE SEQRES 13 A 431 PHE VAL GLY GLN THR GLU ALA PRO LEU VAL VAL ARG PRO SEQRES 14 A 431 TYR ILE ARG ARG MET THR GLU SER GLU LEU PHE ALA VAL SEQRES 15 A 431 MET SER GLY GLY LEU ALA SER VAL ALA GLY SER VAL LEU SEQRES 16 A 431 ALA GLY TYR VAL GLN MET GLY VAL PRO LEU PRO TYR LEU SEQRES 17 A 431 ILE ALA ALA SER PHE MET ALA ALA PRO GLY GLY LEU LEU SEQRES 18 A 431 PHE ALA LYS LEU LEU VAL PRO GLU THR GLU ARG THR GLN SEQRES 19 A 431 ASN ASP ALA GLU VAL LEU ALA GLU ASN GLU ASP GLU LYS SEQRES 20 A 431 PRO THR ASN VAL ILE ASP ALA ALA ALA SER GLY ALA VAL SEQRES 21 A 431 THR GLY ALA GLN ILE ALA ILE ALA VAL GLY ALA SER LEU SEQRES 22 A 431 LEU ALA PHE VAL ALA LEU ILE ALA MET ILE ASN GLY ILE SEQRES 23 A 431 ILE GLY GLY VAL GLY GLY TRP PHE GLY HIS GLY ASP LEU SEQRES 24 A 431 THR LEU GLN ALA ILE LEU GLY TRP LEU PHE SER PRO LEU SEQRES 25 A 431 ALA TRP VAL ILE GLY VAL PRO TRP SER GLU ALA GLY ILE SEQRES 26 A 431 ALA GLY SER LEU ILE GLY GLN LYS VAL VAL ILE ASN GLU SEQRES 27 A 431 PHE VAL ALA TYR SER GLU PHE VAL LYS TYR LEU LYS PRO SEQRES 28 A 431 GLU ALA ALA VAL GLN LEU SER ASP THR THR LYS ALA ILE SEQRES 29 A 431 ILE SER PHE ALA LEU CYS GLY PHE ALA ASN LEU GLY SER SEQRES 30 A 431 ILE ALA VAL LEU VAL GLY GLY LEU SER ILE MET ALA PRO SEQRES 31 A 431 LYS ARG ARG LYS ASP VAL ALA ARG LEU GLY ILE LYS ALA SEQRES 32 A 431 VAL VAL ALA GLY SER LEU SER ASN LEU MET SER ALA VAL SEQRES 33 A 431 ILE ALA GLY LEU PHE THR GLY LEU SER GLY ALA SER VAL SEQRES 34 A 431 LEU GLY SEQRES 1 C 431 GLY PRO ALA VAL PRO ARG MET VAL VAL LEU HIS SER LEU SEQRES 2 C 431 LEU GLY MET ALA VAL LEU ILE ALA ILE ALA VAL LEU LEU SEQRES 3 C 431 SER THR ASP ARG LYS ALA ILE ASN ILE ARG THR VAL ALA SEQRES 4 C 431 GLY ALA PHE LEU ILE GLN VAL ALA LEU GLY ALA LEU VAL SEQRES 5 C 431 LEU TYR VAL PRO GLN GLY ARG ASP MET LEU GLY GLU ALA SEQRES 6 C 431 SER LYS THR ILE SER ASN VAL ILE ALA TYR GLY ASN ASN SEQRES 7 C 431 GLY VAL ASP PHE LEU PHE GLY GLY LEU VAL SER GLU LYS SEQRES 8 C 431 MET PHE GLU VAL PHE GLY GLY GLY GLY PHE VAL PHE ALA SEQRES 9 C 431 LEU ARG VAL LEU PRO MET ILE VAL PHE PHE SER SER LEU SEQRES 10 C 431 MET ALA VAL LEU TYR TYR ILE GLY VAL MET GLN LEU LEU SEQRES 11 C 431 ILE LYS VAL ILE GLY GLY PHE LEU GLN LYS MET LEU GLY SEQRES 12 C 431 THR SER LYS ALA GLU SER MET SER ALA ALA ALA LEU ILE SEQRES 13 C 431 PHE VAL GLY GLN THR GLU ALA PRO LEU VAL VAL ARG PRO SEQRES 14 C 431 TYR ILE ARG ARG MET THR GLU SER GLU LEU PHE ALA VAL SEQRES 15 C 431 MET SER GLY GLY LEU ALA SER VAL ALA GLY SER VAL LEU SEQRES 16 C 431 ALA GLY TYR VAL GLN MET GLY VAL PRO LEU PRO TYR LEU SEQRES 17 C 431 ILE ALA ALA SER PHE MET ALA ALA PRO GLY GLY LEU LEU SEQRES 18 C 431 PHE ALA LYS LEU LEU VAL PRO GLU THR GLU ARG THR GLN SEQRES 19 C 431 ASN ASP ALA GLU VAL LEU ALA GLU ASN GLU ASP GLU LYS SEQRES 20 C 431 PRO THR ASN VAL ILE ASP ALA ALA ALA SER GLY ALA VAL SEQRES 21 C 431 THR GLY ALA GLN ILE ALA ILE ALA VAL GLY ALA SER LEU SEQRES 22 C 431 LEU ALA PHE VAL ALA LEU ILE ALA MET ILE ASN GLY ILE SEQRES 23 C 431 ILE GLY GLY VAL GLY GLY TRP PHE GLY HIS GLY ASP LEU SEQRES 24 C 431 THR LEU GLN ALA ILE LEU GLY TRP LEU PHE SER PRO LEU SEQRES 25 C 431 ALA TRP VAL ILE GLY VAL PRO TRP SER GLU ALA GLY ILE SEQRES 26 C 431 ALA GLY SER LEU ILE GLY GLN LYS VAL VAL ILE ASN GLU SEQRES 27 C 431 PHE VAL ALA TYR SER GLU PHE VAL LYS TYR LEU LYS PRO SEQRES 28 C 431 GLU ALA ALA VAL GLN LEU SER ASP THR THR LYS ALA ILE SEQRES 29 C 431 ILE SER PHE ALA LEU CYS GLY PHE ALA ASN LEU GLY SER SEQRES 30 C 431 ILE ALA VAL LEU VAL GLY GLY LEU SER ILE MET ALA PRO SEQRES 31 C 431 LYS ARG ARG LYS ASP VAL ALA ARG LEU GLY ILE LYS ALA SEQRES 32 C 431 VAL VAL ALA GLY SER LEU SER ASN LEU MET SER ALA VAL SEQRES 33 C 431 ILE ALA GLY LEU PHE THR GLY LEU SER GLY ALA SER VAL SEQRES 34 C 431 LEU GLY SEQRES 1 B 431 GLY PRO ALA VAL PRO ARG MET VAL VAL LEU HIS SER LEU SEQRES 2 B 431 LEU GLY MET ALA VAL LEU ILE ALA ILE ALA VAL LEU LEU SEQRES 3 B 431 SER THR ASP ARG LYS ALA ILE ASN ILE ARG THR VAL ALA SEQRES 4 B 431 GLY ALA PHE LEU ILE GLN VAL ALA LEU GLY ALA LEU VAL SEQRES 5 B 431 LEU TYR VAL PRO GLN GLY ARG ASP MET LEU GLY GLU ALA SEQRES 6 B 431 SER LYS THR ILE SER ASN VAL ILE ALA TYR GLY ASN ASN SEQRES 7 B 431 GLY VAL ASP PHE LEU PHE GLY GLY LEU VAL SER GLU LYS SEQRES 8 B 431 MET PHE GLU VAL PHE GLY GLY GLY GLY PHE VAL PHE ALA SEQRES 9 B 431 LEU ARG VAL LEU PRO MET ILE VAL PHE PHE SER SER LEU SEQRES 10 B 431 MET ALA VAL LEU TYR TYR ILE GLY VAL MET GLN LEU LEU SEQRES 11 B 431 ILE LYS VAL ILE GLY GLY PHE LEU GLN LYS MET LEU GLY SEQRES 12 B 431 THR SER LYS ALA GLU SER MET SER ALA ALA ALA LEU ILE SEQRES 13 B 431 PHE VAL GLY GLN THR GLU ALA PRO LEU VAL VAL ARG PRO SEQRES 14 B 431 TYR ILE ARG ARG MET THR GLU SER GLU LEU PHE ALA VAL SEQRES 15 B 431 MET SER GLY GLY LEU ALA SER VAL ALA GLY SER VAL LEU SEQRES 16 B 431 ALA GLY TYR VAL GLN MET GLY VAL PRO LEU PRO TYR LEU SEQRES 17 B 431 ILE ALA ALA SER PHE MET ALA ALA PRO GLY GLY LEU LEU SEQRES 18 B 431 PHE ALA LYS LEU LEU VAL PRO GLU THR GLU ARG THR GLN SEQRES 19 B 431 ASN ASP ALA GLU VAL LEU ALA GLU ASN GLU ASP GLU LYS SEQRES 20 B 431 PRO THR ASN VAL ILE ASP ALA ALA ALA SER GLY ALA VAL SEQRES 21 B 431 THR GLY ALA GLN ILE ALA ILE ALA VAL GLY ALA SER LEU SEQRES 22 B 431 LEU ALA PHE VAL ALA LEU ILE ALA MET ILE ASN GLY ILE SEQRES 23 B 431 ILE GLY GLY VAL GLY GLY TRP PHE GLY HIS GLY ASP LEU SEQRES 24 B 431 THR LEU GLN ALA ILE LEU GLY TRP LEU PHE SER PRO LEU SEQRES 25 B 431 ALA TRP VAL ILE GLY VAL PRO TRP SER GLU ALA GLY ILE SEQRES 26 B 431 ALA GLY SER LEU ILE GLY GLN LYS VAL VAL ILE ASN GLU SEQRES 27 B 431 PHE VAL ALA TYR SER GLU PHE VAL LYS TYR LEU LYS PRO SEQRES 28 B 431 GLU ALA ALA VAL GLN LEU SER ASP THR THR LYS ALA ILE SEQRES 29 B 431 ILE SER PHE ALA LEU CYS GLY PHE ALA ASN LEU GLY SER SEQRES 30 B 431 ILE ALA VAL LEU VAL GLY GLY LEU SER ILE MET ALA PRO SEQRES 31 B 431 LYS ARG ARG LYS ASP VAL ALA ARG LEU GLY ILE LYS ALA SEQRES 32 B 431 VAL VAL ALA GLY SER LEU SER ASN LEU MET SER ALA VAL SEQRES 33 B 431 ILE ALA GLY LEU PHE THR GLY LEU SER GLY ALA SER VAL SEQRES 34 B 431 LEU GLY HET 6ZL B 501 51 HET 6ZL B 502 35 HETNAM 6ZL 2-{[(4-O-ALPHA-D-GLUCOPYRANOSYL-BETA-D-GLUCOPYRANOSYL) HETNAM 2 6ZL OXY]METHYL}-2-OCTYLDECYL 4-O-ALPHA-D-GLUCOPYRANOSYL- HETNAM 3 6ZL BETA-D-GLUCOPYRANOSIDE FORMUL 4 6ZL 2(C43 H80 O22) HELIX 1 AA1 VAL A 3 SER A 21 1 19 HELIX 2 AA2 ASN A 28 VAL A 46 1 19 HELIX 3 AA3 VAL A 49 PHE A 78 1 30 HELIX 4 AA4 GLY A 79 SER A 83 5 5 HELIX 5 AA5 GLU A 84 GLY A 91 1 8 HELIX 6 AA6 GLY A 92 GLY A 94 5 3 HELIX 7 AA7 VAL A 96 VAL A 101 1 6 HELIX 8 AA8 VAL A 101 ILE A 118 1 18 HELIX 9 AA9 GLY A 119 LEU A 136 1 18 HELIX 10 AB1 SER A 139 VAL A 152 1 14 HELIX 11 AB2 VAL A 161 ARG A 166 1 6 HELIX 12 AB3 THR A 169 SER A 183 1 15 HELIX 13 AB4 ALA A 185 MET A 195 1 11 HELIX 14 AB5 PRO A 198 VAL A 221 1 24 HELIX 15 AB6 ASN A 244 GLY A 289 1 46 HELIX 16 AB7 THR A 294 ILE A 310 1 17 HELIX 17 AB8 PRO A 313 SER A 315 5 3 HELIX 18 AB9 GLU A 316 ILE A 330 1 15 HELIX 19 AC1 ASN A 331 LYS A 341 1 11 HELIX 20 AC2 SER A 352 LEU A 363 1 12 HELIX 21 AC3 GLY A 370 ILE A 381 1 12 HELIX 22 AC4 ALA A 383 LYS A 385 5 3 HELIX 23 AC5 ARG A 386 SER A 419 1 34 HELIX 24 AC6 HIS C 5 SER C 21 1 17 HELIX 25 AC7 ASN C 28 VAL C 46 1 19 HELIX 26 AC8 MET C 55 PHE C 78 1 24 HELIX 27 AC9 GLY C 79 SER C 83 5 5 HELIX 28 AD1 GLU C 84 PHE C 90 1 7 HELIX 29 AD2 GLY C 91 PHE C 95 5 5 HELIX 30 AD3 VAL C 96 VAL C 101 1 6 HELIX 31 AD4 VAL C 101 GLY C 119 1 19 HELIX 32 AD5 GLY C 119 LEU C 136 1 18 HELIX 33 AD6 SER C 139 VAL C 152 1 14 HELIX 34 AD7 GLU C 156 VAL C 160 5 5 HELIX 35 AD8 VAL C 161 ARG C 166 1 6 HELIX 36 AD9 GLU C 170 SER C 183 1 14 HELIX 37 AE1 GLY C 186 GLY C 196 1 11 HELIX 38 AE2 PRO C 198 VAL C 221 1 24 HELIX 39 AE3 ASN C 244 PHE C 288 1 45 HELIX 40 AE4 THR C 294 PHE C 303 1 10 HELIX 41 AE5 PHE C 303 ILE C 310 1 8 HELIX 42 AE6 GLU C 316 VAL C 329 1 14 HELIX 43 AE7 ASN C 331 LYS C 344 1 14 HELIX 44 AE8 SER C 352 LEU C 363 1 12 HELIX 45 AE9 ASN C 368 ALA C 383 1 16 HELIX 46 AF1 ARG C 386 ARG C 392 1 7 HELIX 47 AF2 LEU C 393 PHE C 415 1 23 HELIX 48 AF3 VAL B 3 SER B 21 1 19 HELIX 49 AF4 ASN B 28 TYR B 48 1 21 HELIX 50 AF5 VAL B 49 PHE B 78 1 30 HELIX 51 AF6 GLY B 79 SER B 83 5 5 HELIX 52 AF7 LYS B 85 VAL B 89 5 5 HELIX 53 AF8 PHE B 90 GLY B 94 5 5 HELIX 54 AF9 ARG B 100 GLY B 119 1 20 HELIX 55 AG1 GLY B 119 LEU B 136 1 18 HELIX 56 AG2 SER B 139 VAL B 152 1 14 HELIX 57 AG3 ALA B 157 ARG B 166 1 10 HELIX 58 AG4 THR B 169 SER B 183 1 15 HELIX 59 AG5 ALA B 185 MET B 195 1 11 HELIX 60 AG6 PRO B 198 VAL B 221 1 24 HELIX 61 AG7 ASN B 244 PHE B 288 1 45 HELIX 62 AG8 THR B 294 PHE B 303 1 10 HELIX 63 AG9 PHE B 303 ILE B 310 1 8 HELIX 64 AH1 PRO B 313 VAL B 329 1 17 HELIX 65 AH2 ASN B 331 LYS B 344 1 14 HELIX 66 AH3 SER B 352 LEU B 363 1 12 HELIX 67 AH4 LEU B 369 ILE B 381 1 13 HELIX 68 AH5 ALA B 383 LYS B 385 5 3 HELIX 69 AH6 ARG B 386 PHE B 415 1 30 SITE 1 AC1 2 THR B 62 6ZL B 502 SITE 1 AC2 5 LYS B 61 THR B 62 ASN B 65 TYR B 69 SITE 2 AC2 5 6ZL B 501 CRYST1 116.160 116.160 274.560 90.00 90.00 120.00 P 61 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008609 0.004970 0.000000 0.00000 SCALE2 0.000000 0.009941 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003642 0.00000