data_5L3J # _entry.id 5L3J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5L3J WWPDB D_1200000050 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5L3J _pdbx_database_status.recvd_initial_deposition_date 2016-05-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gjorgjieva, M.' 1 'Tomasic, T.' 2 'Barancokova, M.' 3 'Katsamakas, S.' 4 'Ilas, J.' 5 'Montalvao, S.' 6 'Tammella, P.' 7 'Peterlin Masic, L.' 8 'Kikelj, D.' 9 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Med.Chem. _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 0022-2623 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 59 _citation.language ? _citation.page_first 8941 _citation.page_last 8954 _citation.title 'Discovery of Benzothiazole Scaffold-Based DNA Gyrase B Inhibitors.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.6b00864 _citation.pdbx_database_id_PubMed 27541007 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Gjorgjieva, M.' 1 primary 'Tomasic, T.' 2 primary 'Barancokova, M.' 3 primary 'Katsamakas, S.' 4 primary 'Ilas, J.' 5 primary 'Tammela, P.' 6 primary 'Peterlin Masic, L.' 7 primary 'Kikelj, D.' 8 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 93.480 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5L3J _cell.details ? _cell.formula_units_Z ? _cell.length_a 116.286 _cell.length_a_esd ? _cell.length_b 49.585 _cell.length_b_esd ? _cell.length_c 70.212 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5L3J _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA gyrase subunit B' 41747.016 1 5.99.1.3 ? 'N-terminal domain, UNP residues 15-392' ? 2 non-polymer syn '2-[[2-[[4,5-bis(bromanyl)-1~{H}-pyrrol-2-yl]carbonylamino]-1,3-benzothiazol-6-yl]amino]-2-oxidanylidene-ethanoic acid' 488.111 1 ? ? ? ? 3 non-polymer syn 'IODIDE ION' 126.904 1 ? ? ? ? 4 water nat water 18.015 6 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Type IIA topoisomerase subunit GyrB' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVI MTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLE TFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEV ALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSS QTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMT ; _entity_poly.pdbx_seq_one_letter_code_can ;GLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVI MTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLE TFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEV ALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSS QTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 LEU n 1 3 ASP n 1 4 ALA n 1 5 VAL n 1 6 ARG n 1 7 LYS n 1 8 ARG n 1 9 PRO n 1 10 GLY n 1 11 MET n 1 12 TYR n 1 13 ILE n 1 14 GLY n 1 15 ASP n 1 16 THR n 1 17 ASP n 1 18 ASP n 1 19 GLY n 1 20 THR n 1 21 GLY n 1 22 LEU n 1 23 HIS n 1 24 HIS n 1 25 MET n 1 26 VAL n 1 27 PHE n 1 28 GLU n 1 29 VAL n 1 30 VAL n 1 31 ASP n 1 32 ASN n 1 33 ALA n 1 34 ILE n 1 35 ASP n 1 36 GLU n 1 37 ALA n 1 38 LEU n 1 39 ALA n 1 40 GLY n 1 41 HIS n 1 42 CYS n 1 43 LYS n 1 44 GLU n 1 45 ILE n 1 46 ILE n 1 47 VAL n 1 48 THR n 1 49 ILE n 1 50 HIS n 1 51 ALA n 1 52 ASP n 1 53 ASN n 1 54 SER n 1 55 VAL n 1 56 SER n 1 57 VAL n 1 58 GLN n 1 59 ASP n 1 60 ASP n 1 61 GLY n 1 62 ARG n 1 63 GLY n 1 64 ILE n 1 65 PRO n 1 66 THR n 1 67 GLY n 1 68 ILE n 1 69 HIS n 1 70 PRO n 1 71 GLU n 1 72 GLU n 1 73 GLY n 1 74 VAL n 1 75 SER n 1 76 ALA n 1 77 ALA n 1 78 GLU n 1 79 VAL n 1 80 ILE n 1 81 MET n 1 82 THR n 1 83 VAL n 1 84 LEU n 1 85 HIS n 1 86 ALA n 1 87 GLY n 1 88 GLY n 1 89 LYS n 1 90 PHE n 1 91 ASP n 1 92 ASP n 1 93 ASN n 1 94 SER n 1 95 TYR n 1 96 LYS n 1 97 VAL n 1 98 SER n 1 99 GLY n 1 100 GLY n 1 101 LEU n 1 102 HIS n 1 103 GLY n 1 104 VAL n 1 105 GLY n 1 106 VAL n 1 107 SER n 1 108 VAL n 1 109 VAL n 1 110 ASN n 1 111 ALA n 1 112 LEU n 1 113 SER n 1 114 GLN n 1 115 LYS n 1 116 LEU n 1 117 GLU n 1 118 LEU n 1 119 VAL n 1 120 ILE n 1 121 GLN n 1 122 ARG n 1 123 GLU n 1 124 GLY n 1 125 LYS n 1 126 ILE n 1 127 HIS n 1 128 ARG n 1 129 GLN n 1 130 ILE n 1 131 TYR n 1 132 GLU n 1 133 HIS n 1 134 GLY n 1 135 VAL n 1 136 PRO n 1 137 GLN n 1 138 ALA n 1 139 PRO n 1 140 LEU n 1 141 ALA n 1 142 VAL n 1 143 THR n 1 144 GLY n 1 145 GLU n 1 146 THR n 1 147 GLU n 1 148 LYS n 1 149 THR n 1 150 GLY n 1 151 THR n 1 152 MET n 1 153 VAL n 1 154 ARG n 1 155 PHE n 1 156 TRP n 1 157 PRO n 1 158 SER n 1 159 LEU n 1 160 GLU n 1 161 THR n 1 162 PHE n 1 163 THR n 1 164 ASN n 1 165 VAL n 1 166 THR n 1 167 GLU n 1 168 PHE n 1 169 GLU n 1 170 TYR n 1 171 GLU n 1 172 ILE n 1 173 LEU n 1 174 ALA n 1 175 LYS n 1 176 ARG n 1 177 LEU n 1 178 ARG n 1 179 GLU n 1 180 LEU n 1 181 SER n 1 182 PHE n 1 183 LEU n 1 184 ASN n 1 185 SER n 1 186 GLY n 1 187 VAL n 1 188 SER n 1 189 ILE n 1 190 ARG n 1 191 LEU n 1 192 ARG n 1 193 ASP n 1 194 LYS n 1 195 ARG n 1 196 ASP n 1 197 GLY n 1 198 LYS n 1 199 GLU n 1 200 ASP n 1 201 HIS n 1 202 PHE n 1 203 HIS n 1 204 TYR n 1 205 GLU n 1 206 GLY n 1 207 GLY n 1 208 ILE n 1 209 LYS n 1 210 ALA n 1 211 PHE n 1 212 VAL n 1 213 GLU n 1 214 TYR n 1 215 LEU n 1 216 ASN n 1 217 LYS n 1 218 ASN n 1 219 LYS n 1 220 THR n 1 221 PRO n 1 222 ILE n 1 223 HIS n 1 224 PRO n 1 225 ASN n 1 226 ILE n 1 227 PHE n 1 228 TYR n 1 229 PHE n 1 230 SER n 1 231 THR n 1 232 GLU n 1 233 LYS n 1 234 ASP n 1 235 GLY n 1 236 ILE n 1 237 GLY n 1 238 VAL n 1 239 GLU n 1 240 VAL n 1 241 ALA n 1 242 LEU n 1 243 GLN n 1 244 TRP n 1 245 ASN n 1 246 ASP n 1 247 GLY n 1 248 PHE n 1 249 GLN n 1 250 GLU n 1 251 ASN n 1 252 ILE n 1 253 TYR n 1 254 CYS n 1 255 PHE n 1 256 THR n 1 257 ASN n 1 258 ASN n 1 259 ILE n 1 260 PRO n 1 261 GLN n 1 262 ARG n 1 263 ASP n 1 264 GLY n 1 265 GLY n 1 266 THR n 1 267 HIS n 1 268 LEU n 1 269 ALA n 1 270 GLY n 1 271 PHE n 1 272 ARG n 1 273 ALA n 1 274 ALA n 1 275 MET n 1 276 THR n 1 277 ARG n 1 278 THR n 1 279 LEU n 1 280 ASN n 1 281 ALA n 1 282 TYR n 1 283 MET n 1 284 ASP n 1 285 LYS n 1 286 GLU n 1 287 GLY n 1 288 TYR n 1 289 SER n 1 290 LYS n 1 291 LYS n 1 292 ALA n 1 293 LYS n 1 294 VAL n 1 295 SER n 1 296 ALA n 1 297 THR n 1 298 GLY n 1 299 ASP n 1 300 ASP n 1 301 ALA n 1 302 ARG n 1 303 GLU n 1 304 GLY n 1 305 LEU n 1 306 ILE n 1 307 ALA n 1 308 VAL n 1 309 VAL n 1 310 SER n 1 311 VAL n 1 312 LYS n 1 313 VAL n 1 314 PRO n 1 315 ASP n 1 316 PRO n 1 317 LYS n 1 318 PHE n 1 319 SER n 1 320 SER n 1 321 GLN n 1 322 THR n 1 323 LYS n 1 324 ASP n 1 325 LYS n 1 326 LEU n 1 327 VAL n 1 328 SER n 1 329 SER n 1 330 GLU n 1 331 VAL n 1 332 LYS n 1 333 SER n 1 334 ALA n 1 335 VAL n 1 336 GLU n 1 337 GLN n 1 338 GLN n 1 339 MET n 1 340 ASN n 1 341 GLU n 1 342 LEU n 1 343 LEU n 1 344 ALA n 1 345 GLU n 1 346 TYR n 1 347 LEU n 1 348 LEU n 1 349 GLU n 1 350 ASN n 1 351 PRO n 1 352 THR n 1 353 ASP n 1 354 ALA n 1 355 LYS n 1 356 ILE n 1 357 VAL n 1 358 VAL n 1 359 GLY n 1 360 LYS n 1 361 ILE n 1 362 ILE n 1 363 ASP n 1 364 ALA n 1 365 ALA n 1 366 ARG n 1 367 ALA n 1 368 ARG n 1 369 GLU n 1 370 ALA n 1 371 ALA n 1 372 ARG n 1 373 ARG n 1 374 ALA n 1 375 ARG n 1 376 GLU n 1 377 MET n 1 378 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 378 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'gyrB, Z5190, ECs4634' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GYRB_ECOLI _struct_ref.pdbx_db_accession P0AES6 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVI MTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLE TFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEV ALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSS QTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMT ; _struct_ref.pdbx_align_begin 15 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5L3J _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 378 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0AES6 _struct_ref_seq.db_align_beg 15 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 392 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 15 _struct_ref_seq.pdbx_auth_seq_align_end 392 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 6G9 non-polymer . '2-[[2-[[4,5-bis(bromanyl)-1~{H}-pyrrol-2-yl]carbonylamino]-1,3-benzothiazol-6-yl]amino]-2-oxidanylidene-ethanoic acid' ? 'C14 H8 Br2 N4 O4 S' 488.111 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5L3J _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.380 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.260 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '15-25% PEG3350' _exptl_crystal_grow.pdbx_pH_range 6.0-7.0 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-04-02 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.00000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5L3J _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.830 _reflns.d_resolution_low 70.080 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9437 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 0.000 _reflns.percent_possible_obs 96.700 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.500 _reflns.pdbx_Rmerge_I_obs 0.076 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.17 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.830 _reflns_shell.d_res_low 3.080 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 96.500 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.446 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 2.400 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 0.7200 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.8100 _refine.aniso_B[2][2] 0.3700 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -0.9900 _refine.B_iso_max 145.360 _refine.B_iso_mean 61.0180 _refine.B_iso_min 26.200 _refine.correlation_coeff_Fo_to_Fc 0.9080 _refine.correlation_coeff_Fo_to_Fc_free 0.8730 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5L3J _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.8300 _refine.ls_d_res_low 70.0800 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8772 _refine.ls_number_reflns_R_free 665 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.7500 _refine.ls_percent_reflns_R_free 7.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2601 _refine.ls_R_factor_R_free 0.2885 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2580 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.4700 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 39.5390 _refine.overall_SU_ML 0.3800 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.8300 _refine_hist.d_res_low 70.0800 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 6 _refine_hist.number_atoms_total 2844 _refine_hist.pdbx_number_residues_total 360 _refine_hist.pdbx_B_iso_mean_ligand 77.79 _refine_hist.pdbx_B_iso_mean_solvent 36.26 _refine_hist.pdbx_number_atoms_protein 2807 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 0.019 2748 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 1824 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.113 1.957 3741 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.409 3.000 4375 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.119 5.000 358 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 36.210 24.576 118 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 12.188 15.000 412 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 12.623 15.000 14 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.054 0.200 429 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 3165 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 549 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.8300 _refine_ls_shell.d_res_low 2.9030 _refine_ls_shell.number_reflns_all 661 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 51 _refine_ls_shell.number_reflns_R_work 610 _refine_ls_shell.percent_reflns_obs 96.6400 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.5870 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.4710 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5L3J _struct.title 'ESCHERICHIA COLI DNA GYRASE B IN COMPLEX WITH BENZOTHIAZOLE-BASED INHIBITOR' _struct.pdbx_descriptor 'DNA gyrase subunit B (E.C.5.99.1.3)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5L3J _struct_keywords.text 'Gyrase B, inhibitor, complex, GyrB, Proteros Biostructures, isomerase, PROTEROS BIOSTRUCTURES GMBH' _struct_keywords.pdbx_keywords ISOMERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 3 ? ARG A 8 ? ASP A 17 ARG A 22 1 ? 6 HELX_P HELX_P2 AA2 ARG A 8 ? GLY A 14 ? ARG A 22 GLY A 28 1 ? 7 HELX_P HELX_P3 AA3 GLY A 19 ? ALA A 39 ? GLY A 33 ALA A 53 1 ? 21 HELX_P HELX_P4 AA4 SER A 75 ? MET A 81 ? SER A 89 MET A 95 1 ? 7 HELX_P HELX_P5 AA5 GLY A 105 ? LEU A 112 ? GLY A 119 LEU A 126 1 ? 8 HELX_P HELX_P6 AA6 GLU A 169 ? ASN A 184 ? GLU A 183 ASN A 198 1 ? 16 HELX_P HELX_P7 AA7 GLY A 207 ? LYS A 217 ? GLY A 221 LYS A 231 1 ? 11 HELX_P HELX_P8 AA8 THR A 266 ? GLU A 286 ? THR A 280 GLU A 300 1 ? 21 HELX_P HELX_P9 AA9 GLY A 287 ? LYS A 293 ? GLY A 301 LYS A 307 1 ? 7 HELX_P HELX_P10 AB1 THR A 297 ? GLU A 303 ? THR A 311 GLU A 317 1 ? 7 HELX_P HELX_P11 AB2 SER A 328 ? ASN A 350 ? SER A 342 ASN A 364 1 ? 23 HELX_P HELX_P12 AB3 ASN A 350 ? MET A 377 ? ASN A 364 MET A 391 1 ? 28 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 8 ? AA3 ? 5 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? parallel AA2 7 8 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? parallel AA3 4 5 ? anti-parallel AA4 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 135 ? PRO A 136 ? VAL A 149 PRO A 150 AA1 2 LYS A 125 ? GLU A 132 ? LYS A 139 GLU A 146 AA1 3 ALA A 141 ? GLU A 145 ? ALA A 155 GLU A 159 AA2 1 VAL A 135 ? PRO A 136 ? VAL A 149 PRO A 150 AA2 2 LYS A 125 ? GLU A 132 ? LYS A 139 GLU A 146 AA2 3 SER A 113 ? GLN A 121 ? SER A 127 GLN A 135 AA2 4 GLY A 150 ? PRO A 157 ? GLY A 164 PRO A 171 AA2 5 SER A 54 ? ASP A 59 ? SER A 68 ASP A 73 AA2 6 GLU A 44 ? HIS A 50 ? GLU A 58 HIS A 64 AA2 7 SER A 188 ? ASP A 193 ? SER A 202 ASP A 207 AA2 8 LYS A 198 ? PHE A 202 ? LYS A 212 PHE A 216 AA3 1 PHE A 227 ? LYS A 233 ? PHE A 241 LYS A 247 AA3 2 ILE A 236 ? TRP A 244 ? ILE A 250 TRP A 258 AA3 3 LEU A 305 ? LYS A 312 ? LEU A 319 LYS A 326 AA3 4 ASN A 251 ? THR A 256 ? ASN A 265 THR A 270 AA3 5 ILE A 259 ? GLN A 261 ? ILE A 273 GLN A 275 AA4 1 GLY A 264 ? GLY A 265 ? GLY A 278 GLY A 279 AA4 2 LYS A 325 ? LEU A 326 ? LYS A 339 LEU A 340 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL A 135 ? O VAL A 149 N GLU A 132 ? N GLU A 146 AA1 2 3 N ARG A 128 ? N ARG A 142 O ALA A 141 ? O ALA A 155 AA2 1 2 O VAL A 135 ? O VAL A 149 N GLU A 132 ? N GLU A 146 AA2 2 3 O GLN A 129 ? O GLN A 143 N LEU A 118 ? N LEU A 132 AA2 3 4 N GLU A 117 ? N GLU A 131 O ARG A 154 ? O ARG A 168 AA2 4 5 O THR A 151 ? O THR A 165 N ASP A 59 ? N ASP A 73 AA2 5 6 O GLN A 58 ? O GLN A 72 N ILE A 46 ? N ILE A 60 AA2 6 7 N ILE A 49 ? N ILE A 63 O ARG A 192 ? O ARG A 206 AA2 7 8 N ILE A 189 ? N ILE A 203 O PHE A 202 ? O PHE A 216 AA3 1 2 N THR A 231 ? N THR A 245 O VAL A 238 ? O VAL A 252 AA3 2 3 N GLY A 237 ? N GLY A 251 O LYS A 312 ? O LYS A 326 AA3 3 4 O ALA A 307 ? O ALA A 321 N TYR A 253 ? N TYR A 267 AA3 4 5 N THR A 256 ? N THR A 270 O ILE A 259 ? O ILE A 273 AA4 1 2 N GLY A 264 ? N GLY A 278 O LEU A 326 ? O LEU A 340 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 6G9 401 ? 12 'binding site for residue 6G9 A 401' AC2 Software A IOD 402 ? 3 'binding site for residue IOD A 402' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 VAL A 29 ? VAL A 43 . ? 1_555 ? 2 AC1 12 ASN A 32 ? ASN A 46 . ? 1_555 ? 3 AC1 12 GLU A 36 ? GLU A 50 . ? 1_555 ? 4 AC1 12 HIS A 41 ? HIS A 55 . ? 1_555 ? 5 AC1 12 VAL A 57 ? VAL A 71 . ? 1_555 ? 6 AC1 12 ASP A 59 ? ASP A 73 . ? 1_555 ? 7 AC1 12 ARG A 62 ? ARG A 76 . ? 1_555 ? 8 AC1 12 GLY A 63 ? GLY A 77 . ? 1_555 ? 9 AC1 12 ILE A 64 ? ILE A 78 . ? 1_555 ? 10 AC1 12 PRO A 65 ? PRO A 79 . ? 1_555 ? 11 AC1 12 THR A 151 ? THR A 165 . ? 1_555 ? 12 AC1 12 VAL A 153 ? VAL A 167 . ? 1_555 ? 13 AC2 3 GLY A 10 ? GLY A 24 . ? 2_555 ? 14 AC2 3 MET A 11 ? MET A 25 . ? 2_555 ? 15 AC2 3 GLN A 321 ? GLN A 335 . ? 1_555 ? # _atom_sites.entry_id 5L3J _atom_sites.fract_transf_matrix[1][1] 0.008599 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000522 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020167 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014269 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol BR C I N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 15 15 GLY GLY A . n A 1 2 LEU 2 16 16 LEU LEU A . n A 1 3 ASP 3 17 17 ASP ASP A . n A 1 4 ALA 4 18 18 ALA ALA A . n A 1 5 VAL 5 19 19 VAL VAL A . n A 1 6 ARG 6 20 20 ARG ARG A . n A 1 7 LYS 7 21 21 LYS LYS A . n A 1 8 ARG 8 22 22 ARG ARG A . n A 1 9 PRO 9 23 23 PRO PRO A . n A 1 10 GLY 10 24 24 GLY GLY A . n A 1 11 MET 11 25 25 MET MET A . n A 1 12 TYR 12 26 26 TYR TYR A . n A 1 13 ILE 13 27 27 ILE ILE A . n A 1 14 GLY 14 28 28 GLY GLY A . n A 1 15 ASP 15 29 29 ASP ASP A . n A 1 16 THR 16 30 30 THR THR A . n A 1 17 ASP 17 31 31 ASP ASP A . n A 1 18 ASP 18 32 32 ASP ASP A . n A 1 19 GLY 19 33 33 GLY GLY A . n A 1 20 THR 20 34 34 THR THR A . n A 1 21 GLY 21 35 35 GLY GLY A . n A 1 22 LEU 22 36 36 LEU LEU A . n A 1 23 HIS 23 37 37 HIS HIS A . n A 1 24 HIS 24 38 38 HIS HIS A . n A 1 25 MET 25 39 39 MET MET A . n A 1 26 VAL 26 40 40 VAL VAL A . n A 1 27 PHE 27 41 41 PHE PHE A . n A 1 28 GLU 28 42 42 GLU GLU A . n A 1 29 VAL 29 43 43 VAL VAL A . n A 1 30 VAL 30 44 44 VAL VAL A . n A 1 31 ASP 31 45 45 ASP ASP A . n A 1 32 ASN 32 46 46 ASN ASN A . n A 1 33 ALA 33 47 47 ALA ALA A . n A 1 34 ILE 34 48 48 ILE ILE A . n A 1 35 ASP 35 49 49 ASP ASP A . n A 1 36 GLU 36 50 50 GLU GLU A . n A 1 37 ALA 37 51 51 ALA ALA A . n A 1 38 LEU 38 52 52 LEU LEU A . n A 1 39 ALA 39 53 53 ALA ALA A . n A 1 40 GLY 40 54 54 GLY GLY A . n A 1 41 HIS 41 55 55 HIS HIS A . n A 1 42 CYS 42 56 56 CYS CYS A . n A 1 43 LYS 43 57 57 LYS LYS A . n A 1 44 GLU 44 58 58 GLU GLU A . n A 1 45 ILE 45 59 59 ILE ILE A . n A 1 46 ILE 46 60 60 ILE ILE A . n A 1 47 VAL 47 61 61 VAL VAL A . n A 1 48 THR 48 62 62 THR THR A . n A 1 49 ILE 49 63 63 ILE ILE A . n A 1 50 HIS 50 64 64 HIS HIS A . n A 1 51 ALA 51 65 65 ALA ALA A . n A 1 52 ASP 52 66 66 ASP ASP A . n A 1 53 ASN 53 67 67 ASN ASN A . n A 1 54 SER 54 68 68 SER SER A . n A 1 55 VAL 55 69 69 VAL VAL A . n A 1 56 SER 56 70 70 SER SER A . n A 1 57 VAL 57 71 71 VAL VAL A . n A 1 58 GLN 58 72 72 GLN GLN A . n A 1 59 ASP 59 73 73 ASP ASP A . n A 1 60 ASP 60 74 74 ASP ASP A . n A 1 61 GLY 61 75 75 GLY GLY A . n A 1 62 ARG 62 76 76 ARG ARG A . n A 1 63 GLY 63 77 77 GLY GLY A . n A 1 64 ILE 64 78 78 ILE ILE A . n A 1 65 PRO 65 79 79 PRO PRO A . n A 1 66 THR 66 80 80 THR THR A . n A 1 67 GLY 67 81 81 GLY GLY A . n A 1 68 ILE 68 82 82 ILE ILE A . n A 1 69 HIS 69 83 83 HIS HIS A . n A 1 70 PRO 70 84 84 PRO PRO A . n A 1 71 GLU 71 85 85 GLU GLU A . n A 1 72 GLU 72 86 86 GLU GLU A . n A 1 73 GLY 73 87 87 GLY GLY A . n A 1 74 VAL 74 88 88 VAL VAL A . n A 1 75 SER 75 89 89 SER SER A . n A 1 76 ALA 76 90 90 ALA ALA A . n A 1 77 ALA 77 91 91 ALA ALA A . n A 1 78 GLU 78 92 92 GLU GLU A . n A 1 79 VAL 79 93 93 VAL VAL A . n A 1 80 ILE 80 94 94 ILE ILE A . n A 1 81 MET 81 95 95 MET MET A . n A 1 82 THR 82 96 96 THR THR A . n A 1 83 VAL 83 97 97 VAL VAL A . n A 1 84 LEU 84 98 98 LEU LEU A . n A 1 85 HIS 85 99 99 HIS HIS A . n A 1 86 ALA 86 100 ? ? ? A . n A 1 87 GLY 87 101 ? ? ? A . n A 1 88 GLY 88 102 ? ? ? A . n A 1 89 LYS 89 103 ? ? ? A . n A 1 90 PHE 90 104 ? ? ? A . n A 1 91 ASP 91 105 ? ? ? A . n A 1 92 ASP 92 106 ? ? ? A . n A 1 93 ASN 93 107 ? ? ? A . n A 1 94 SER 94 108 ? ? ? A . n A 1 95 TYR 95 109 ? ? ? A . n A 1 96 LYS 96 110 ? ? ? A . n A 1 97 VAL 97 111 ? ? ? A . n A 1 98 SER 98 112 ? ? ? A . n A 1 99 GLY 99 113 ? ? ? A . n A 1 100 GLY 100 114 ? ? ? A . n A 1 101 LEU 101 115 ? ? ? A . n A 1 102 HIS 102 116 ? ? ? A . n A 1 103 GLY 103 117 ? ? ? A . n A 1 104 VAL 104 118 118 VAL VAL A . n A 1 105 GLY 105 119 119 GLY GLY A . n A 1 106 VAL 106 120 120 VAL VAL A . n A 1 107 SER 107 121 121 SER SER A . n A 1 108 VAL 108 122 122 VAL VAL A . n A 1 109 VAL 109 123 123 VAL VAL A . n A 1 110 ASN 110 124 124 ASN ASN A . n A 1 111 ALA 111 125 125 ALA ALA A . n A 1 112 LEU 112 126 126 LEU LEU A . n A 1 113 SER 113 127 127 SER SER A . n A 1 114 GLN 114 128 128 GLN GLN A . n A 1 115 LYS 115 129 129 LYS LYS A . n A 1 116 LEU 116 130 130 LEU LEU A . n A 1 117 GLU 117 131 131 GLU GLU A . n A 1 118 LEU 118 132 132 LEU LEU A . n A 1 119 VAL 119 133 133 VAL VAL A . n A 1 120 ILE 120 134 134 ILE ILE A . n A 1 121 GLN 121 135 135 GLN GLN A . n A 1 122 ARG 122 136 136 ARG ARG A . n A 1 123 GLU 123 137 137 GLU GLU A . n A 1 124 GLY 124 138 138 GLY GLY A . n A 1 125 LYS 125 139 139 LYS LYS A . n A 1 126 ILE 126 140 140 ILE ILE A . n A 1 127 HIS 127 141 141 HIS HIS A . n A 1 128 ARG 128 142 142 ARG ARG A . n A 1 129 GLN 129 143 143 GLN GLN A . n A 1 130 ILE 130 144 144 ILE ILE A . n A 1 131 TYR 131 145 145 TYR TYR A . n A 1 132 GLU 132 146 146 GLU GLU A . n A 1 133 HIS 133 147 147 HIS HIS A . n A 1 134 GLY 134 148 148 GLY GLY A . n A 1 135 VAL 135 149 149 VAL VAL A . n A 1 136 PRO 136 150 150 PRO PRO A . n A 1 137 GLN 137 151 151 GLN GLN A . n A 1 138 ALA 138 152 152 ALA ALA A . n A 1 139 PRO 139 153 153 PRO PRO A . n A 1 140 LEU 140 154 154 LEU LEU A . n A 1 141 ALA 141 155 155 ALA ALA A . n A 1 142 VAL 142 156 156 VAL VAL A . n A 1 143 THR 143 157 157 THR THR A . n A 1 144 GLY 144 158 158 GLY GLY A . n A 1 145 GLU 145 159 159 GLU GLU A . n A 1 146 THR 146 160 160 THR THR A . n A 1 147 GLU 147 161 161 GLU GLU A . n A 1 148 LYS 148 162 162 LYS LYS A . n A 1 149 THR 149 163 163 THR THR A . n A 1 150 GLY 150 164 164 GLY GLY A . n A 1 151 THR 151 165 165 THR THR A . n A 1 152 MET 152 166 166 MET MET A . n A 1 153 VAL 153 167 167 VAL VAL A . n A 1 154 ARG 154 168 168 ARG ARG A . n A 1 155 PHE 155 169 169 PHE PHE A . n A 1 156 TRP 156 170 170 TRP TRP A . n A 1 157 PRO 157 171 171 PRO PRO A . n A 1 158 SER 158 172 172 SER SER A . n A 1 159 LEU 159 173 173 LEU LEU A . n A 1 160 GLU 160 174 174 GLU GLU A . n A 1 161 THR 161 175 175 THR THR A . n A 1 162 PHE 162 176 176 PHE PHE A . n A 1 163 THR 163 177 177 THR THR A . n A 1 164 ASN 164 178 178 ASN ASN A . n A 1 165 VAL 165 179 179 VAL VAL A . n A 1 166 THR 166 180 180 THR THR A . n A 1 167 GLU 167 181 181 GLU GLU A . n A 1 168 PHE 168 182 182 PHE PHE A . n A 1 169 GLU 169 183 183 GLU GLU A . n A 1 170 TYR 170 184 184 TYR TYR A . n A 1 171 GLU 171 185 185 GLU GLU A . n A 1 172 ILE 172 186 186 ILE ILE A . n A 1 173 LEU 173 187 187 LEU LEU A . n A 1 174 ALA 174 188 188 ALA ALA A . n A 1 175 LYS 175 189 189 LYS LYS A . n A 1 176 ARG 176 190 190 ARG ARG A . n A 1 177 LEU 177 191 191 LEU LEU A . n A 1 178 ARG 178 192 192 ARG ARG A . n A 1 179 GLU 179 193 193 GLU GLU A . n A 1 180 LEU 180 194 194 LEU LEU A . n A 1 181 SER 181 195 195 SER SER A . n A 1 182 PHE 182 196 196 PHE PHE A . n A 1 183 LEU 183 197 197 LEU LEU A . n A 1 184 ASN 184 198 198 ASN ASN A . n A 1 185 SER 185 199 199 SER SER A . n A 1 186 GLY 186 200 200 GLY GLY A . n A 1 187 VAL 187 201 201 VAL VAL A . n A 1 188 SER 188 202 202 SER SER A . n A 1 189 ILE 189 203 203 ILE ILE A . n A 1 190 ARG 190 204 204 ARG ARG A . n A 1 191 LEU 191 205 205 LEU LEU A . n A 1 192 ARG 192 206 206 ARG ARG A . n A 1 193 ASP 193 207 207 ASP ASP A . n A 1 194 LYS 194 208 208 LYS LYS A . n A 1 195 ARG 195 209 209 ARG ARG A . n A 1 196 ASP 196 210 210 ASP ASP A . n A 1 197 GLY 197 211 211 GLY GLY A . n A 1 198 LYS 198 212 212 LYS LYS A . n A 1 199 GLU 199 213 213 GLU GLU A . n A 1 200 ASP 200 214 214 ASP ASP A . n A 1 201 HIS 201 215 215 HIS HIS A . n A 1 202 PHE 202 216 216 PHE PHE A . n A 1 203 HIS 203 217 217 HIS HIS A . n A 1 204 TYR 204 218 218 TYR TYR A . n A 1 205 GLU 205 219 219 GLU GLU A . n A 1 206 GLY 206 220 220 GLY GLY A . n A 1 207 GLY 207 221 221 GLY GLY A . n A 1 208 ILE 208 222 222 ILE ILE A . n A 1 209 LYS 209 223 223 LYS LYS A . n A 1 210 ALA 210 224 224 ALA ALA A . n A 1 211 PHE 211 225 225 PHE PHE A . n A 1 212 VAL 212 226 226 VAL VAL A . n A 1 213 GLU 213 227 227 GLU GLU A . n A 1 214 TYR 214 228 228 TYR TYR A . n A 1 215 LEU 215 229 229 LEU LEU A . n A 1 216 ASN 216 230 230 ASN ASN A . n A 1 217 LYS 217 231 231 LYS LYS A . n A 1 218 ASN 218 232 232 ASN ASN A . n A 1 219 LYS 219 233 233 LYS LYS A . n A 1 220 THR 220 234 234 THR THR A . n A 1 221 PRO 221 235 235 PRO PRO A . n A 1 222 ILE 222 236 236 ILE ILE A . n A 1 223 HIS 223 237 237 HIS HIS A . n A 1 224 PRO 224 238 238 PRO PRO A . n A 1 225 ASN 225 239 239 ASN ASN A . n A 1 226 ILE 226 240 240 ILE ILE A . n A 1 227 PHE 227 241 241 PHE PHE A . n A 1 228 TYR 228 242 242 TYR TYR A . n A 1 229 PHE 229 243 243 PHE PHE A . n A 1 230 SER 230 244 244 SER SER A . n A 1 231 THR 231 245 245 THR THR A . n A 1 232 GLU 232 246 246 GLU GLU A . n A 1 233 LYS 233 247 247 LYS LYS A . n A 1 234 ASP 234 248 248 ASP ASP A . n A 1 235 GLY 235 249 249 GLY GLY A . n A 1 236 ILE 236 250 250 ILE ILE A . n A 1 237 GLY 237 251 251 GLY GLY A . n A 1 238 VAL 238 252 252 VAL VAL A . n A 1 239 GLU 239 253 253 GLU GLU A . n A 1 240 VAL 240 254 254 VAL VAL A . n A 1 241 ALA 241 255 255 ALA ALA A . n A 1 242 LEU 242 256 256 LEU LEU A . n A 1 243 GLN 243 257 257 GLN GLN A . n A 1 244 TRP 244 258 258 TRP TRP A . n A 1 245 ASN 245 259 259 ASN ASN A . n A 1 246 ASP 246 260 260 ASP ASP A . n A 1 247 GLY 247 261 261 GLY GLY A . n A 1 248 PHE 248 262 262 PHE PHE A . n A 1 249 GLN 249 263 263 GLN GLN A . n A 1 250 GLU 250 264 264 GLU GLU A . n A 1 251 ASN 251 265 265 ASN ASN A . n A 1 252 ILE 252 266 266 ILE ILE A . n A 1 253 TYR 253 267 267 TYR TYR A . n A 1 254 CYS 254 268 268 CYS CYS A . n A 1 255 PHE 255 269 269 PHE PHE A . n A 1 256 THR 256 270 270 THR THR A . n A 1 257 ASN 257 271 271 ASN ASN A . n A 1 258 ASN 258 272 272 ASN ASN A . n A 1 259 ILE 259 273 273 ILE ILE A . n A 1 260 PRO 260 274 274 PRO PRO A . n A 1 261 GLN 261 275 275 GLN GLN A . n A 1 262 ARG 262 276 276 ARG ARG A . n A 1 263 ASP 263 277 277 ASP ASP A . n A 1 264 GLY 264 278 278 GLY GLY A . n A 1 265 GLY 265 279 279 GLY GLY A . n A 1 266 THR 266 280 280 THR THR A . n A 1 267 HIS 267 281 281 HIS HIS A . n A 1 268 LEU 268 282 282 LEU LEU A . n A 1 269 ALA 269 283 283 ALA ALA A . n A 1 270 GLY 270 284 284 GLY GLY A . n A 1 271 PHE 271 285 285 PHE PHE A . n A 1 272 ARG 272 286 286 ARG ARG A . n A 1 273 ALA 273 287 287 ALA ALA A . n A 1 274 ALA 274 288 288 ALA ALA A . n A 1 275 MET 275 289 289 MET MET A . n A 1 276 THR 276 290 290 THR THR A . n A 1 277 ARG 277 291 291 ARG ARG A . n A 1 278 THR 278 292 292 THR THR A . n A 1 279 LEU 279 293 293 LEU LEU A . n A 1 280 ASN 280 294 294 ASN ASN A . n A 1 281 ALA 281 295 295 ALA ALA A . n A 1 282 TYR 282 296 296 TYR TYR A . n A 1 283 MET 283 297 297 MET MET A . n A 1 284 ASP 284 298 298 ASP ASP A . n A 1 285 LYS 285 299 299 LYS LYS A . n A 1 286 GLU 286 300 300 GLU GLU A . n A 1 287 GLY 287 301 301 GLY GLY A . n A 1 288 TYR 288 302 302 TYR TYR A . n A 1 289 SER 289 303 303 SER SER A . n A 1 290 LYS 290 304 304 LYS LYS A . n A 1 291 LYS 291 305 305 LYS LYS A . n A 1 292 ALA 292 306 306 ALA ALA A . n A 1 293 LYS 293 307 307 LYS LYS A . n A 1 294 VAL 294 308 308 VAL VAL A . n A 1 295 SER 295 309 309 SER SER A . n A 1 296 ALA 296 310 310 ALA ALA A . n A 1 297 THR 297 311 311 THR THR A . n A 1 298 GLY 298 312 312 GLY GLY A . n A 1 299 ASP 299 313 313 ASP ASP A . n A 1 300 ASP 300 314 314 ASP ASP A . n A 1 301 ALA 301 315 315 ALA ALA A . n A 1 302 ARG 302 316 316 ARG ARG A . n A 1 303 GLU 303 317 317 GLU GLU A . n A 1 304 GLY 304 318 318 GLY GLY A . n A 1 305 LEU 305 319 319 LEU LEU A . n A 1 306 ILE 306 320 320 ILE ILE A . n A 1 307 ALA 307 321 321 ALA ALA A . n A 1 308 VAL 308 322 322 VAL VAL A . n A 1 309 VAL 309 323 323 VAL VAL A . n A 1 310 SER 310 324 324 SER SER A . n A 1 311 VAL 311 325 325 VAL VAL A . n A 1 312 LYS 312 326 326 LYS LYS A . n A 1 313 VAL 313 327 327 VAL VAL A . n A 1 314 PRO 314 328 328 PRO PRO A . n A 1 315 ASP 315 329 329 ASP ASP A . n A 1 316 PRO 316 330 330 PRO PRO A . n A 1 317 LYS 317 331 331 LYS LYS A . n A 1 318 PHE 318 332 332 PHE PHE A . n A 1 319 SER 319 333 333 SER SER A . n A 1 320 SER 320 334 334 SER SER A . n A 1 321 GLN 321 335 335 GLN GLN A . n A 1 322 THR 322 336 336 THR THR A . n A 1 323 LYS 323 337 337 LYS LYS A . n A 1 324 ASP 324 338 338 ASP ASP A . n A 1 325 LYS 325 339 339 LYS LYS A . n A 1 326 LEU 326 340 340 LEU LEU A . n A 1 327 VAL 327 341 341 VAL VAL A . n A 1 328 SER 328 342 342 SER SER A . n A 1 329 SER 329 343 343 SER SER A . n A 1 330 GLU 330 344 344 GLU GLU A . n A 1 331 VAL 331 345 345 VAL VAL A . n A 1 332 LYS 332 346 346 LYS LYS A . n A 1 333 SER 333 347 347 SER SER A . n A 1 334 ALA 334 348 348 ALA ALA A . n A 1 335 VAL 335 349 349 VAL VAL A . n A 1 336 GLU 336 350 350 GLU GLU A . n A 1 337 GLN 337 351 351 GLN GLN A . n A 1 338 GLN 338 352 352 GLN GLN A . n A 1 339 MET 339 353 353 MET MET A . n A 1 340 ASN 340 354 354 ASN ASN A . n A 1 341 GLU 341 355 355 GLU GLU A . n A 1 342 LEU 342 356 356 LEU LEU A . n A 1 343 LEU 343 357 357 LEU LEU A . n A 1 344 ALA 344 358 358 ALA ALA A . n A 1 345 GLU 345 359 359 GLU GLU A . n A 1 346 TYR 346 360 360 TYR TYR A . n A 1 347 LEU 347 361 361 LEU LEU A . n A 1 348 LEU 348 362 362 LEU LEU A . n A 1 349 GLU 349 363 363 GLU GLU A . n A 1 350 ASN 350 364 364 ASN ASN A . n A 1 351 PRO 351 365 365 PRO PRO A . n A 1 352 THR 352 366 366 THR THR A . n A 1 353 ASP 353 367 367 ASP ASP A . n A 1 354 ALA 354 368 368 ALA ALA A . n A 1 355 LYS 355 369 369 LYS LYS A . n A 1 356 ILE 356 370 370 ILE ILE A . n A 1 357 VAL 357 371 371 VAL VAL A . n A 1 358 VAL 358 372 372 VAL VAL A . n A 1 359 GLY 359 373 373 GLY GLY A . n A 1 360 LYS 360 374 374 LYS LYS A . n A 1 361 ILE 361 375 375 ILE ILE A . n A 1 362 ILE 362 376 376 ILE ILE A . n A 1 363 ASP 363 377 377 ASP ASP A . n A 1 364 ALA 364 378 378 ALA ALA A . n A 1 365 ALA 365 379 379 ALA ALA A . n A 1 366 ARG 366 380 380 ARG ARG A . n A 1 367 ALA 367 381 381 ALA ALA A . n A 1 368 ARG 368 382 382 ARG ARG A . n A 1 369 GLU 369 383 383 GLU GLU A . n A 1 370 ALA 370 384 384 ALA ALA A . n A 1 371 ALA 371 385 385 ALA ALA A . n A 1 372 ARG 372 386 386 ARG ARG A . n A 1 373 ARG 373 387 387 ARG ARG A . n A 1 374 ALA 374 388 388 ALA ALA A . n A 1 375 ARG 375 389 389 ARG ARG A . n A 1 376 GLU 376 390 390 GLU GLU A . n A 1 377 MET 377 391 391 MET MET A . n A 1 378 THR 378 392 392 THR THR A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6G9 1 401 1 6G9 INX A . C 3 IOD 1 402 1 IOD IOD A . D 4 HOH 1 501 9 HOH HOH A . D 4 HOH 2 502 3 HOH HOH A . D 4 HOH 3 503 5 HOH HOH A . D 4 HOH 4 504 10 HOH HOH A . D 4 HOH 5 505 11 HOH HOH A . D 4 HOH 6 506 12 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 120 ? 1 MORE 0 ? 1 'SSA (A^2)' 17620 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-08-31 2 'Structure model' 1 1 2016-10-26 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -16.4980 11.7830 14.4340 0.1671 0.3280 0.1866 -0.0001 0.0760 -0.0424 3.5796 2.8628 3.6684 -0.4411 -1.4741 -0.9196 0.3420 -0.0110 -0.3309 -0.1202 0.7261 0.0388 0.0423 -0.7597 -0.0227 'X-RAY DIFFRACTION' 2 ? refined 11.2720 -8.0500 22.7360 0.0863 0.4435 0.0331 -0.0048 0.0060 -0.0128 2.7334 3.4354 1.6111 -1.2071 0.9807 -0.6221 -0.0219 0.0650 -0.0432 -0.0835 -0.1526 -0.1965 -0.0436 0.3142 0.1065 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 15 A 222 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 223 A 392 ? ? ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0049 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.20 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 96 ? ? -133.61 -48.07 2 1 ARG A 136 ? ? -114.67 -83.85 3 1 GLU A 137 ? ? -78.66 -94.33 4 1 THR A 177 ? ? -96.49 -69.80 5 1 SER A 199 ? ? -17.62 -81.35 6 1 HIS A 217 ? ? -142.74 55.56 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 21 ? CG ? A LYS 7 CG 2 1 Y 0 A LYS 21 ? CD ? A LYS 7 CD 3 1 Y 0 A LYS 21 ? CE ? A LYS 7 CE 4 1 Y 0 A LYS 21 ? NZ ? A LYS 7 NZ 5 1 Y 0 A ARG 22 ? NE ? A ARG 8 NE 6 1 Y 0 A ARG 22 ? CZ ? A ARG 8 CZ 7 1 Y 0 A ARG 22 ? NH1 ? A ARG 8 NH1 8 1 Y 0 A ARG 22 ? NH2 ? A ARG 8 NH2 9 1 Y 0 A ILE 27 ? CD1 ? A ILE 13 CD1 10 1 Y 0 A LYS 57 ? CG ? A LYS 43 CG 11 1 Y 0 A LYS 57 ? CD ? A LYS 43 CD 12 1 Y 0 A LYS 57 ? CE ? A LYS 43 CE 13 1 Y 0 A LYS 57 ? NZ ? A LYS 43 NZ 14 1 Y 0 A ILE 59 ? CD1 ? A ILE 45 CD1 15 1 Y 0 A ILE 60 ? CD1 ? A ILE 46 CD1 16 1 Y 0 A ARG 76 ? CG ? A ARG 62 CG 17 1 Y 0 A ARG 76 ? CD ? A ARG 62 CD 18 1 Y 0 A ARG 76 ? NE ? A ARG 62 NE 19 1 Y 0 A ARG 76 ? CZ ? A ARG 62 CZ 20 1 Y 0 A ARG 76 ? NH1 ? A ARG 62 NH1 21 1 Y 0 A ARG 76 ? NH2 ? A ARG 62 NH2 22 1 Y 0 A ILE 82 ? CD1 ? A ILE 68 CD1 23 1 Y 0 A GLU 85 ? CG ? A GLU 71 CG 24 1 Y 0 A GLU 85 ? CD ? A GLU 71 CD 25 1 Y 0 A GLU 85 ? OE1 ? A GLU 71 OE1 26 1 Y 0 A GLU 85 ? OE2 ? A GLU 71 OE2 27 1 Y 0 A GLU 86 ? CG ? A GLU 72 CG 28 1 Y 0 A GLU 86 ? CD ? A GLU 72 CD 29 1 Y 0 A GLU 86 ? OE1 ? A GLU 72 OE1 30 1 Y 0 A GLU 86 ? OE2 ? A GLU 72 OE2 31 1 Y 0 A GLU 92 ? CD ? A GLU 78 CD 32 1 Y 0 A GLU 92 ? OE1 ? A GLU 78 OE1 33 1 Y 0 A GLU 92 ? OE2 ? A GLU 78 OE2 34 1 Y 0 A ILE 94 ? CD1 ? A ILE 80 CD1 35 1 Y 0 A HIS 99 ? CG ? A HIS 85 CG 36 1 Y 0 A HIS 99 ? ND1 ? A HIS 85 ND1 37 1 Y 0 A HIS 99 ? CD2 ? A HIS 85 CD2 38 1 Y 0 A HIS 99 ? CE1 ? A HIS 85 CE1 39 1 Y 0 A HIS 99 ? NE2 ? A HIS 85 NE2 40 1 Y 0 A VAL 118 ? CG1 ? A VAL 104 CG1 41 1 Y 0 A VAL 118 ? CG2 ? A VAL 104 CG2 42 1 Y 0 A GLN 128 ? CD ? A GLN 114 CD 43 1 Y 0 A GLN 128 ? OE1 ? A GLN 114 OE1 44 1 Y 0 A GLN 128 ? NE2 ? A GLN 114 NE2 45 1 Y 0 A LYS 129 ? NZ ? A LYS 115 NZ 46 1 Y 0 A ILE 134 ? CD1 ? A ILE 120 CD1 47 1 Y 0 A GLU 137 ? CG ? A GLU 123 CG 48 1 Y 0 A GLU 137 ? CD ? A GLU 123 CD 49 1 Y 0 A GLU 137 ? OE1 ? A GLU 123 OE1 50 1 Y 0 A GLU 137 ? OE2 ? A GLU 123 OE2 51 1 Y 0 A LYS 139 ? CD ? A LYS 125 CD 52 1 Y 0 A LYS 139 ? CE ? A LYS 125 CE 53 1 Y 0 A LYS 139 ? NZ ? A LYS 125 NZ 54 1 Y 0 A VAL 149 ? CG1 ? A VAL 135 CG1 55 1 Y 0 A VAL 149 ? CG2 ? A VAL 135 CG2 56 1 Y 0 A GLU 161 ? CG ? A GLU 147 CG 57 1 Y 0 A GLU 161 ? CD ? A GLU 147 CD 58 1 Y 0 A GLU 161 ? OE1 ? A GLU 147 OE1 59 1 Y 0 A GLU 161 ? OE2 ? A GLU 147 OE2 60 1 Y 0 A LEU 173 ? CD1 ? A LEU 159 CD1 61 1 Y 0 A LEU 173 ? CD2 ? A LEU 159 CD2 62 1 Y 0 A GLU 174 ? CG ? A GLU 160 CG 63 1 Y 0 A GLU 174 ? CD ? A GLU 160 CD 64 1 Y 0 A GLU 174 ? OE1 ? A GLU 160 OE1 65 1 Y 0 A GLU 174 ? OE2 ? A GLU 160 OE2 66 1 Y 0 A GLU 185 ? CG ? A GLU 171 CG 67 1 Y 0 A GLU 185 ? CD ? A GLU 171 CD 68 1 Y 0 A GLU 185 ? OE1 ? A GLU 171 OE1 69 1 Y 0 A GLU 185 ? OE2 ? A GLU 171 OE2 70 1 Y 0 A LYS 189 ? CG ? A LYS 175 CG 71 1 Y 0 A LYS 189 ? CD ? A LYS 175 CD 72 1 Y 0 A LYS 189 ? CE ? A LYS 175 CE 73 1 Y 0 A LYS 189 ? NZ ? A LYS 175 NZ 74 1 Y 0 A LYS 212 ? CE ? A LYS 198 CE 75 1 Y 0 A LYS 212 ? NZ ? A LYS 198 NZ 76 1 Y 0 A GLU 219 ? CG ? A GLU 205 CG 77 1 Y 0 A GLU 219 ? CD ? A GLU 205 CD 78 1 Y 0 A GLU 219 ? OE1 ? A GLU 205 OE1 79 1 Y 0 A GLU 219 ? OE2 ? A GLU 205 OE2 80 1 Y 0 A LYS 223 ? NZ ? A LYS 209 NZ 81 1 Y 0 A LYS 231 ? NZ ? A LYS 217 NZ 82 1 Y 0 A LYS 247 ? CG ? A LYS 233 CG 83 1 Y 0 A LYS 247 ? CD ? A LYS 233 CD 84 1 Y 0 A LYS 247 ? CE ? A LYS 233 CE 85 1 Y 0 A LYS 247 ? NZ ? A LYS 233 NZ 86 1 Y 0 A GLN 263 ? CD ? A GLN 249 CD 87 1 Y 0 A GLN 263 ? OE1 ? A GLN 249 OE1 88 1 Y 0 A GLN 263 ? NE2 ? A GLN 249 NE2 89 1 Y 0 A ILE 266 ? CD1 ? A ILE 252 CD1 90 1 Y 0 A LYS 299 ? CD ? A LYS 285 CD 91 1 Y 0 A LYS 299 ? CE ? A LYS 285 CE 92 1 Y 0 A LYS 299 ? NZ ? A LYS 285 NZ 93 1 Y 0 A LYS 304 ? CG ? A LYS 290 CG 94 1 Y 0 A LYS 304 ? CD ? A LYS 290 CD 95 1 Y 0 A LYS 304 ? CE ? A LYS 290 CE 96 1 Y 0 A LYS 304 ? NZ ? A LYS 290 NZ 97 1 Y 0 A LYS 305 ? CG ? A LYS 291 CG 98 1 Y 0 A LYS 305 ? CD ? A LYS 291 CD 99 1 Y 0 A LYS 305 ? CE ? A LYS 291 CE 100 1 Y 0 A LYS 305 ? NZ ? A LYS 291 NZ 101 1 Y 0 A LYS 307 ? CG ? A LYS 293 CG 102 1 Y 0 A LYS 307 ? CD ? A LYS 293 CD 103 1 Y 0 A LYS 307 ? CE ? A LYS 293 CE 104 1 Y 0 A LYS 307 ? NZ ? A LYS 293 NZ 105 1 Y 0 A SER 309 ? OG ? A SER 295 OG 106 1 Y 0 A ARG 316 ? CG ? A ARG 302 CG 107 1 Y 0 A ARG 316 ? CD ? A ARG 302 CD 108 1 Y 0 A ARG 316 ? NE ? A ARG 302 NE 109 1 Y 0 A ARG 316 ? CZ ? A ARG 302 CZ 110 1 Y 0 A ARG 316 ? NH1 ? A ARG 302 NH1 111 1 Y 0 A ARG 316 ? NH2 ? A ARG 302 NH2 112 1 Y 0 A LYS 331 ? CD ? A LYS 317 CD 113 1 Y 0 A LYS 331 ? CE ? A LYS 317 CE 114 1 Y 0 A LYS 331 ? NZ ? A LYS 317 NZ 115 1 Y 0 A LYS 369 ? NZ ? A LYS 355 NZ 116 1 Y 0 A ARG 380 ? CD ? A ARG 366 CD 117 1 Y 0 A ARG 380 ? NE ? A ARG 366 NE 118 1 Y 0 A ARG 380 ? CZ ? A ARG 366 CZ 119 1 Y 0 A ARG 380 ? NH1 ? A ARG 366 NH1 120 1 Y 0 A ARG 380 ? NH2 ? A ARG 366 NH2 121 1 Y 0 A ARG 386 ? CD ? A ARG 372 CD 122 1 Y 0 A ARG 386 ? NE ? A ARG 372 NE 123 1 Y 0 A ARG 386 ? CZ ? A ARG 372 CZ 124 1 Y 0 A ARG 386 ? NH1 ? A ARG 372 NH1 125 1 Y 0 A ARG 386 ? NH2 ? A ARG 372 NH2 126 1 Y 0 A ARG 389 ? CD ? A ARG 375 CD 127 1 Y 0 A ARG 389 ? NE ? A ARG 375 NE 128 1 Y 0 A ARG 389 ? CZ ? A ARG 375 CZ 129 1 Y 0 A ARG 389 ? NH1 ? A ARG 375 NH1 130 1 Y 0 A ARG 389 ? NH2 ? A ARG 375 NH2 131 1 Y 0 A GLU 390 ? CG ? A GLU 376 CG 132 1 Y 0 A GLU 390 ? CD ? A GLU 376 CD 133 1 Y 0 A GLU 390 ? OE1 ? A GLU 376 OE1 134 1 Y 0 A GLU 390 ? OE2 ? A GLU 376 OE2 135 1 Y 0 A MET 391 ? CG ? A MET 377 CG 136 1 Y 0 A MET 391 ? SD ? A MET 377 SD 137 1 Y 0 A MET 391 ? CE ? A MET 377 CE 138 1 Y 0 A THR 392 ? OG1 ? A THR 378 OG1 139 1 Y 0 A THR 392 ? CG2 ? A THR 378 CG2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 100 ? A ALA 86 2 1 Y 1 A GLY 101 ? A GLY 87 3 1 Y 1 A GLY 102 ? A GLY 88 4 1 Y 1 A LYS 103 ? A LYS 89 5 1 Y 1 A PHE 104 ? A PHE 90 6 1 Y 1 A ASP 105 ? A ASP 91 7 1 Y 1 A ASP 106 ? A ASP 92 8 1 Y 1 A ASN 107 ? A ASN 93 9 1 Y 1 A SER 108 ? A SER 94 10 1 Y 1 A TYR 109 ? A TYR 95 11 1 Y 1 A LYS 110 ? A LYS 96 12 1 Y 1 A VAL 111 ? A VAL 97 13 1 Y 1 A SER 112 ? A SER 98 14 1 Y 1 A GLY 113 ? A GLY 99 15 1 Y 1 A GLY 114 ? A GLY 100 16 1 Y 1 A LEU 115 ? A LEU 101 17 1 Y 1 A HIS 116 ? A HIS 102 18 1 Y 1 A GLY 117 ? A GLY 103 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2-[[2-[[4,5-bis(bromanyl)-1~{H}-pyrrol-2-yl]carbonylamino]-1,3-benzothiazol-6-yl]amino]-2-oxidanylidene-ethanoic acid' 6G9 3 'IODIDE ION' IOD 4 water HOH #