HEADER SIGNALING PROTEIN 28-MAY-16 5L56 TITLE PLEXIN A1 FULL EXTRACELLULAR REGION, DOMAINS 1 TO 10, TO 4 ANGSTROM CAVEAT 5L56 NAG J 1 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLEXIN-A1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 37-1236; COMPND 5 SYNONYM: PLEXIN-1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: PLXNA1, KIAA4053; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK293 KEYWDS RECEPTOR, SIGNALING, AXON GUIDANCE, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.J.C.JANSSEN,Y.KONG,T.MALINAUSKAS,V.R.VANGOOR,C.H.COLES,R.KAUFMANN, AUTHOR 2 T.NI,R.J.C.GILBERT,S.PADILLA-PARRA,R.J.PASTERKAMP,E.Y.JONES REVDAT 8 20-NOV-24 5L56 1 REMARK REVDAT 7 10-JAN-24 5L56 1 HETSYN LINK REVDAT 6 29-JUL-20 5L56 1 CAVEAT COMPND REMARK HETNAM REVDAT 6 2 1 LINK SITE ATOM REVDAT 5 19-SEP-18 5L56 1 REMARK REVDAT 4 30-AUG-17 5L56 1 REMARK REVDAT 3 17-AUG-16 5L56 1 JRNL REVDAT 2 20-JUL-16 5L56 1 JRNL REVDAT 1 06-JUL-16 5L56 0 JRNL AUTH Y.KONG,B.J.JANSSEN,T.MALINAUSKAS,V.R.VANGOOR,C.H.COLES, JRNL AUTH 2 R.KAUFMANN,T.NI,R.J.GILBERT,S.PADILLA-PARRA,R.J.PASTERKAMP, JRNL AUTH 3 E.Y.JONES JRNL TITL STRUCTURAL BASIS FOR PLEXIN ACTIVATION AND REGULATION. JRNL REF NEURON V. 91 548 2016 JRNL REFN ISSN 0896-6273 JRNL PMID 27397516 JRNL DOI 10.1016/J.NEURON.2016.06.018 REMARK 2 REMARK 2 RESOLUTION. 4.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 87.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 27483 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.259 REMARK 3 R VALUE (WORKING SET) : 0.257 REMARK 3 FREE R VALUE : 0.308 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1471 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 4.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 4.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2002 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.48 REMARK 3 BIN R VALUE (WORKING SET) : 0.3150 REMARK 3 BIN FREE R VALUE SET COUNT : 103 REMARK 3 BIN FREE R VALUE : 0.3330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9085 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 607 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 133.7 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.748 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.629 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 46.776 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.892 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.853 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9987 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 13669 ; 1.243 ; 2.038 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1169 ; 7.636 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 420 ;33.895 ;23.595 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1509 ;18.742 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 72 ;13.529 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1646 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7306 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4682 ; 5.114 ;12.420 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5846 ; 8.991 ;18.612 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 5304 ; 5.450 ;14.205 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 38147 ;19.030 ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5L56 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1200000163. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-APR-11; 14-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : DIAMOND; DIAMOND REMARK 200 BEAMLINE : I24; I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96131; 0.96131 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL; PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F; DECTRIS REMARK 200 PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28954 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.000 REMARK 200 RESOLUTION RANGE LOW (A) : 87.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.24100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.04000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3OKT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 76.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6% (W/V) PEG 4K, 5 MM TRICINE OR 5 MM REMARK 280 TRIS, PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.5K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.09000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 97.67150 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 97.67150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 132.13500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 97.67150 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 97.67150 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 44.04500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 97.67150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 97.67150 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 132.13500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 97.67150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 97.67150 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 44.04500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 88.09000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -97.67150 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -97.67150 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 44.04500 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 34 REMARK 465 THR A 35 REMARK 465 GLY A 36 REMARK 465 THR A 266 REMARK 465 SER A 267 REMARK 465 PRO A 268 REMARK 465 ASP A 269 REMARK 465 ALA A 270 REMARK 465 SER A 1154 REMARK 465 PRO A 1155 REMARK 465 THR A 1156 REMARK 465 GLY A 1157 REMARK 465 LEU A 1158 REMARK 465 LEU A 1159 REMARK 465 GLU A 1160 REMARK 465 LEU A 1161 REMARK 465 LYS A 1162 REMARK 465 PRO A 1163 REMARK 465 LEU A 1211 REMARK 465 THR A 1212 REMARK 465 GLY A 1213 REMARK 465 GLN A 1214 REMARK 465 HIS A 1215 REMARK 465 PRO A 1228 REMARK 465 GLY A 1229 REMARK 465 MET A 1230 REMARK 465 LEU A 1231 REMARK 465 GLN A 1232 REMARK 465 VAL A 1233 REMARK 465 TYR A 1234 REMARK 465 SER A 1235 REMARK 465 ASP A 1236 REMARK 465 ARG A 1237 REMARK 465 THR A 1238 REMARK 465 LYS A 1239 REMARK 465 HIS A 1240 REMARK 465 HIS A 1241 REMARK 465 HIS A 1242 REMARK 465 HIS A 1243 REMARK 465 HIS A 1244 REMARK 465 HIS A 1245 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C GLY A 855 NH2 ARG A 890 1.62 REMARK 500 ND2 ASN A 570 C2 NAG C 1 1.67 REMARK 500 CA GLY A 855 NH2 ARG A 890 1.78 REMARK 500 ND2 ASN A 75 C2 NAG B 1 1.92 REMARK 500 O GLY A 855 NH2 ARG A 890 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 86 C - N - CD ANGL. DEV. = -14.2 DEGREES REMARK 500 PRO A 869 C - N - CA ANGL. DEV. = 9.8 DEGREES REMARK 500 PRO A 869 C - N - CD ANGL. DEV. = -17.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 67 -2.13 69.29 REMARK 500 PRO A 86 109.05 -7.50 REMARK 500 PRO A 95 125.52 -0.56 REMARK 500 SER A 130 -146.11 -129.26 REMARK 500 ALA A 131 22.94 44.49 REMARK 500 SER A 132 38.51 -149.44 REMARK 500 ASP A 143 -3.04 -144.27 REMARK 500 GLU A 149 71.10 -154.21 REMARK 500 HIS A 151 14.86 -159.37 REMARK 500 GLN A 178 -168.61 -77.11 REMARK 500 SER A 225 60.35 -68.35 REMARK 500 GLU A 251 -77.28 53.59 REMARK 500 GLN A 260 -168.91 -127.94 REMARK 500 ASN A 286 59.75 -98.43 REMARK 500 TYR A 314 113.07 -164.32 REMARK 500 ALA A 321 -71.64 -61.70 REMARK 500 ASN A 345 74.31 54.15 REMARK 500 SER A 382 69.02 60.52 REMARK 500 ASN A 410 15.59 49.19 REMARK 500 GLN A 411 -164.55 30.18 REMARK 500 LEU A 424 -48.65 -130.49 REMARK 500 GLN A 441 46.89 36.21 REMARK 500 PRO A 465 -39.06 -39.52 REMARK 500 VAL A 477 -72.74 -125.62 REMARK 500 ASP A 487 96.23 -66.72 REMARK 500 SER A 512 57.93 -147.49 REMARK 500 ARG A 526 -19.16 79.40 REMARK 500 SER A 591 -4.45 -59.80 REMARK 500 GLU A 599 -154.60 -165.93 REMARK 500 ASP A 600 29.14 -78.22 REMARK 500 ASP A 610 -131.12 54.84 REMARK 500 ALA A 692 -72.59 -38.75 REMARK 500 LEU A 694 -54.94 -19.99 REMARK 500 ALA A 727 -166.94 -168.75 REMARK 500 GLN A 764 113.43 -171.47 REMARK 500 ASN A 767 111.89 -34.07 REMARK 500 GLU A 825 -6.44 73.17 REMARK 500 SER A 856 42.24 -78.23 REMARK 500 PRO A 869 117.58 15.30 REMARK 500 GLU A 885 -40.47 -131.24 REMARK 500 LEU A 896 -16.39 87.51 REMARK 500 ALA A 915 16.71 36.31 REMARK 500 ARG A 940 -48.82 -148.58 REMARK 500 CYS A 942 47.87 -72.31 REMARK 500 TYR A 946 47.99 -101.45 REMARK 500 SER A 988 -80.51 -103.16 REMARK 500 SER A1002 -73.79 -118.89 REMARK 500 ASN A1029 -119.45 54.27 REMARK 500 GLU A1054 34.67 -83.65 REMARK 500 ASP A1108 104.15 -45.66 REMARK 500 REMARK 500 THIS ENTRY HAS 53 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 85 PRO A 86 -135.84 REMARK 500 TYR A 94 PRO A 95 -116.22 REMARK 500 ASN A 410 GLN A 411 142.29 REMARK 500 ASP A 527 PRO A 528 -146.00 REMARK 500 CYS A 807 PRO A 808 -134.36 REMARK 500 SER A 868 PRO A 869 -107.92 REMARK 500 SER A 965 PRO A 966 123.57 REMARK 500 ASP A 1052 PRO A 1053 96.43 REMARK 500 REMARK 500 REMARK: NULL DBREF 5L56 A 37 1236 UNP P70206 PLXA1_MOUSE 37 1236 SEQADV 5L56 GLU A 34 UNP P70206 EXPRESSION TAG SEQADV 5L56 THR A 35 UNP P70206 EXPRESSION TAG SEQADV 5L56 GLY A 36 UNP P70206 EXPRESSION TAG SEQADV 5L56 ARG A 1237 UNP P70206 EXPRESSION TAG SEQADV 5L56 THR A 1238 UNP P70206 EXPRESSION TAG SEQADV 5L56 LYS A 1239 UNP P70206 EXPRESSION TAG SEQADV 5L56 HIS A 1240 UNP P70206 EXPRESSION TAG SEQADV 5L56 HIS A 1241 UNP P70206 EXPRESSION TAG SEQADV 5L56 HIS A 1242 UNP P70206 EXPRESSION TAG SEQADV 5L56 HIS A 1243 UNP P70206 EXPRESSION TAG SEQADV 5L56 HIS A 1244 UNP P70206 EXPRESSION TAG SEQADV 5L56 HIS A 1245 UNP P70206 EXPRESSION TAG SEQRES 1 A 1212 GLU THR GLY PRO ALA PHE ARG THR PHE VAL ALA SER ASP SEQRES 2 A 1212 TRP GLY LEU THR HIS LEU VAL VAL HIS GLU GLN THR GLY SEQRES 3 A 1212 GLU VAL TYR VAL GLY ALA VAL ASN ARG ILE TYR LYS LEU SEQRES 4 A 1212 SER GLY ASN LEU THR LEU LEU ARG ALA HIS VAL THR GLY SEQRES 5 A 1212 PRO VAL GLU ASP ASN GLU LYS CYS TYR PRO PRO PRO SER SEQRES 6 A 1212 VAL GLN SER CYS PRO HIS GLY LEU GLY SER THR ASP ASN SEQRES 7 A 1212 VAL ASN LYS LEU LEU LEU LEU ASP TYR ALA ALA ASN ARG SEQRES 8 A 1212 LEU LEU ALA CYS GLY SER ALA SER GLN GLY ILE CYS GLN SEQRES 9 A 1212 PHE LEU ARG LEU ASP ASP LEU PHE LYS LEU GLY GLU PRO SEQRES 10 A 1212 HIS HIS ARG LYS GLU HIS TYR LEU SER SER VAL ARG GLU SEQRES 11 A 1212 ALA GLY SER MET ALA GLY VAL LEU ILE ALA GLY PRO PRO SEQRES 12 A 1212 GLY GLN GLY GLN ALA LYS LEU PHE VAL GLY THR PRO ILE SEQRES 13 A 1212 ASP GLY LYS SER GLU TYR PHE PRO THR LEU SER SER ARG SEQRES 14 A 1212 ARG LEU MET ALA ASN GLU GLU ASP ALA ASP MET PHE GLY SEQRES 15 A 1212 PHE VAL TYR GLN ASP GLU PHE VAL SER SER GLN LEU LYS SEQRES 16 A 1212 ILE PRO SER ASP THR LEU SER LYS PHE PRO ALA PHE ASP SEQRES 17 A 1212 ILE TYR TYR VAL TYR SER PHE ARG SER GLU GLN PHE VAL SEQRES 18 A 1212 TYR TYR LEU THR LEU GLN LEU ASP THR GLN LEU THR SER SEQRES 19 A 1212 PRO ASP ALA ALA GLY GLU HIS PHE PHE THR SER LYS ILE SEQRES 20 A 1212 VAL ARG LEU CYS VAL ASN ASP PRO LYS PHE TYR SER TYR SEQRES 21 A 1212 VAL GLU PHE PRO ILE GLY CYS GLU GLN ALA GLY VAL GLU SEQRES 22 A 1212 TYR ARG LEU VAL GLN ASP ALA TYR LEU SER ARG PRO GLY SEQRES 23 A 1212 GLN ALA LEU ALA LYS GLN LEU GLY LEU ALA GLU ASP GLU SEQRES 24 A 1212 GLU VAL LEU PHE THR VAL PHE ALA GLN GLY GLN LYS ASN SEQRES 25 A 1212 ARG VAL LYS PRO PRO LYS GLU SER ALA LEU CYS LEU PHE SEQRES 26 A 1212 THR LEU ARG ALA ILE LYS GLU LYS ILE LYS GLU ARG ILE SEQRES 27 A 1212 GLN SER CYS TYR ARG GLY GLU GLY LYS LEU SER LEU PRO SEQRES 28 A 1212 TRP LEU LEU ASN LYS GLU LEU GLY CYS ILE ASN SER PRO SEQRES 29 A 1212 LEU GLN ILE ASP ASP ASP PHE CYS GLY GLN ASP PHE ASN SEQRES 30 A 1212 GLN PRO LEU GLY GLY THR VAL THR ILE GLU GLY THR PRO SEQRES 31 A 1212 LEU PHE VAL ASP LYS GLU ASP GLY LEU THR ALA VAL ALA SEQRES 32 A 1212 ALA TYR ASP TYR GLN GLY ARG THR VAL VAL PHE ALA GLY SEQRES 33 A 1212 THR ARG SER GLY ARG ILE ARG LYS ILE LEU VAL ASP LEU SEQRES 34 A 1212 ALA ASN PRO SER GLY ARG PRO ALA LEU ALA TYR GLU SER SEQRES 35 A 1212 VAL VAL ALA GLN GLU GLY ASN PRO ILE LEU ARG ASP LEU SEQRES 36 A 1212 VAL LEU SER PRO ASN ARG GLN TYR LEU TYR ALA MET THR SEQRES 37 A 1212 GLU LYS GLN VAL THR GLN VAL PRO VAL GLU SER CYS VAL SEQRES 38 A 1212 GLN TYR THR SER CYS GLU LEU CYS LEU GLY SER ARG ASP SEQRES 39 A 1212 PRO HIS CYS GLY TRP CYS VAL LEU HIS SER ILE CYS SER SEQRES 40 A 1212 ARG GLN ASP ALA CYS GLU ARG ALA GLU GLU PRO GLN ARG SEQRES 41 A 1212 PHE ALA SER ASP LEU LEU GLN CYS VAL GLN LEU THR VAL SEQRES 42 A 1212 GLN PRO ARG ASN VAL SER VAL THR MET SER GLN VAL PRO SEQRES 43 A 1212 LEU VAL LEU GLN ALA TRP ASN VAL PRO ASP LEU SER ALA SEQRES 44 A 1212 GLY VAL ASN CYS SER PHE GLU ASP PHE THR GLU THR GLU SEQRES 45 A 1212 SER ILE LEU GLU ASP GLY ARG ILE HIS CYS HIS SER PRO SEQRES 46 A 1212 SER ALA ARG GLU VAL ALA PRO ILE THR GLN GLY GLN GLY SEQRES 47 A 1212 ASP GLN ARG VAL VAL LYS LEU TYR LEU LYS SER LYS GLU SEQRES 48 A 1212 THR GLY LYS LYS PHE ALA SER VAL ASP PHE VAL PHE TYR SEQRES 49 A 1212 ASN CYS SER VAL HIS GLN SER CYS LEU ALA CYS VAL ASN SEQRES 50 A 1212 GLY SER PHE PRO CYS HIS TRP CYS LYS TYR ARG HIS VAL SEQRES 51 A 1212 CYS THR ASN ASN ALA ALA ASP CYS ALA PHE LEU GLU GLY SEQRES 52 A 1212 ARG VAL ASN MET SER GLU ASP CYS PRO GLN ILE LEU PRO SEQRES 53 A 1212 SER THR HIS ILE TYR VAL PRO VAL GLY VAL VAL LYS PRO SEQRES 54 A 1212 ILE THR LEU ALA ALA ARG ASN LEU PRO GLN PRO GLN SER SEQRES 55 A 1212 GLY GLN ARG GLY TYR GLU CYS LEU PHE HIS ILE PRO GLY SEQRES 56 A 1212 SER PRO ALA ARG VAL THR ALA LEU ARG PHE ASN SER SER SEQRES 57 A 1212 SER LEU GLN CYS GLN ASN SER SER TYR SER TYR GLU GLY SEQRES 58 A 1212 ASN ASP VAL SER ASP LEU PRO VAL ASN LEU SER VAL VAL SEQRES 59 A 1212 TRP ASN GLY ASN PHE VAL ILE ASP ASN PRO GLN ASN ILE SEQRES 60 A 1212 GLN ALA HIS LEU TYR LYS CYS PRO ALA LEU ARG GLN SER SEQRES 61 A 1212 CYS GLY LEU CYS LEU LYS ALA ASP PRO ARG PHE GLU CYS SEQRES 62 A 1212 GLY TRP CYS VAL ALA GLU ARG ARG CYS SER LEU ARG HIS SEQRES 63 A 1212 HIS CYS PRO ALA ASP SER PRO ALA SER TRP MET HIS ALA SEQRES 64 A 1212 HIS HIS GLY SER SER ARG CYS THR ASP PRO LYS ILE LEU SEQRES 65 A 1212 LYS LEU SER PRO GLU THR GLY PRO ARG GLN GLY GLY THR SEQRES 66 A 1212 ARG LEU THR ILE THR GLY GLU ASN LEU GLY LEU ARG PHE SEQRES 67 A 1212 GLU ASP VAL ARG LEU GLY VAL HIS VAL GLY LYS VAL LEU SEQRES 68 A 1212 CYS SER PRO VAL GLU SER GLU TYR ILE SER ALA GLU GLN SEQRES 69 A 1212 ILE VAL CYS GLU ILE GLY ASP ALA SER THR LEU ARG ALA SEQRES 70 A 1212 HIS ASP ALA LEU VAL GLU VAL CYS VAL ARG ASP CYS SER SEQRES 71 A 1212 LEU HIS TYR ARG ALA LEU SER PRO LYS ARG PHE THR PHE SEQRES 72 A 1212 VAL THR PRO THR PHE TYR ARG VAL SER PRO SER ARG GLY SEQRES 73 A 1212 PRO LEU SER GLY GLY THR TRP ILE GLY ILE GLU GLY SER SEQRES 74 A 1212 HIS LEU ASN ALA GLY SER ASP VAL ALA VAL SER ILE GLY SEQRES 75 A 1212 GLY ARG PRO CYS SER PHE SER TRP ARG ASN SER ARG GLU SEQRES 76 A 1212 ILE ARG CYS LEU THR PRO PRO GLY HIS THR PRO GLY SER SEQRES 77 A 1212 ALA PRO ILE VAL ILE ASN ILE ASN ARG ALA GLN LEU SER SEQRES 78 A 1212 ASN PRO GLU VAL LYS TYR ASN TYR THR GLU ASP PRO THR SEQRES 79 A 1212 ILE LEU ARG ILE ASP PRO GLU TRP SER ILE ASN SER GLY SEQRES 80 A 1212 GLY THR LEU LEU THR VAL THR GLY THR ASN LEU ALA THR SEQRES 81 A 1212 VAL ARG GLU PRO ARG ILE ARG ALA LYS TYR GLY GLY ILE SEQRES 82 A 1212 GLU ARG GLU ASN SER CYS MET VAL TYR ASN ASP THR THR SEQRES 83 A 1212 MET VAL CYS ARG ALA PRO SER ILE ASP ASN PRO LYS ARG SEQRES 84 A 1212 SER PRO PRO GLU LEU GLY GLU ARG PRO ASP GLU ILE GLY SEQRES 85 A 1212 PHE ILE MET ASP ASN VAL ARG THR LEU LEU VAL LEU ASN SEQRES 86 A 1212 SER SER SER PHE LEU TYR TYR PRO ASP PRO VAL LEU GLU SEQRES 87 A 1212 PRO LEU SER PRO THR GLY LEU LEU GLU LEU LYS PRO SER SEQRES 88 A 1212 SER PRO LEU ILE LEU LYS GLY ARG ASN LEU LEU PRO PRO SEQRES 89 A 1212 ALA PRO GLY ASN SER ARG LEU ASN TYR THR VAL LEU ILE SEQRES 90 A 1212 GLY SER THR PRO CYS ILE LEU THR VAL SER GLU THR GLN SEQRES 91 A 1212 LEU LEU CYS GLU ALA PRO ASN LEU THR GLY GLN HIS LYS SEQRES 92 A 1212 VAL THR VAL ARG ALA GLY GLY PHE GLU PHE SER PRO GLY SEQRES 93 A 1212 MET LEU GLN VAL TYR SER ASP ARG THR LYS HIS HIS HIS SEQRES 94 A 1212 HIS HIS HIS MODRES 5L56 NAG B 1 NAG -D MODRES 5L56 NAG B 2 NAG -D MODRES 5L56 MAN B 4 MAN -D MODRES 5L56 NAG C 1 NAG -D MODRES 5L56 NAG C 2 NAG -D MODRES 5L56 MAN C 6 MAN -D MODRES 5L56 MAN C 4 MAN -D MODRES 5L56 MAN C 5 MAN -D MODRES 5L56 NAG D 1 NAG -D MODRES 5L56 NAG D 2 NAG -D MODRES 5L56 MAN D 4 MAN -D MODRES 5L56 NAG E 1 NAG -D MODRES 5L56 NAG E 2 NAG -D MODRES 5L56 MAN E 7 MAN -D MODRES 5L56 MAN E 4 MAN -D MODRES 5L56 MAN E 5 MAN -D MODRES 5L56 MAN E 6 MAN -D MODRES 5L56 NAG F 1 NAG -D MODRES 5L56 NAG F 2 NAG -D MODRES 5L56 MAN F 7 MAN -D MODRES 5L56 MAN F 4 MAN -D MODRES 5L56 MAN F 5 MAN -D MODRES 5L56 MAN F 6 MAN -D MODRES 5L56 NAG G 1 NAG -D MODRES 5L56 NAG G 2 NAG -D MODRES 5L56 MAN G 4 MAN -D MODRES 5L56 MAN G 5 MAN -D MODRES 5L56 NAG A 1334 NAG -D MODRES 5L56 NAG H 1 NAG -D MODRES 5L56 NAG H 2 NAG -D MODRES 5L56 NAG I 1 NAG -D MODRES 5L56 NAG I 2 NAG -D MODRES 5L56 MAN I 6 MAN -D MODRES 5L56 MAN I 4 MAN -D MODRES 5L56 MAN I 5 MAN -D MODRES 5L56 NAG J 1 NAG -D MODRES 5L56 NAG J 2 NAG -D MODRES 5L56 MAN J 7 MAN -D MODRES 5L56 MAN J 4 MAN -D MODRES 5L56 MAN J 5 MAN -D MODRES 5L56 MAN J 6 MAN -D HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET MAN B 4 11 HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET MAN C 5 11 HET MAN C 6 11 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET MAN E 5 11 HET MAN E 6 11 HET MAN E 7 11 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET MAN F 4 11 HET MAN F 5 11 HET MAN F 6 11 HET MAN F 7 11 HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET MAN G 4 11 HET MAN G 5 11 HET NAG H 1 14 HET NAG H 2 14 HET BMA H 3 11 HET NAG I 1 14 HET NAG I 2 14 HET BMA I 3 11 HET MAN I 4 11 HET MAN I 5 11 HET MAN I 6 11 HET NAG J 1 14 HET NAG J 2 14 HET BMA J 3 11 HET MAN J 4 11 HET MAN J 5 11 HET MAN J 6 11 HET MAN J 7 11 HET NAG A1334 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 NAG 19(C8 H15 N O6) FORMUL 2 BMA 9(C6 H12 O6) FORMUL 2 MAN 22(C6 H12 O6) HELIX 1 AA1 PRO A 230 PHE A 237 1 8 HELIX 2 AA2 PRO A 318 LEU A 326 1 9 HELIX 3 AA3 LEU A 360 TYR A 375 1 16 HELIX 4 AA4 SER A 512 TYR A 516 5 5 HELIX 5 AA5 SER A 518 ARG A 526 1 9 HELIX 6 AA6 LEU A 535 SER A 537 5 3 HELIX 7 AA7 ARG A 541 CYS A 545 5 5 HELIX 8 AA8 ASP A 557 CYS A 561 5 5 HELIX 9 AA9 SER A 619 GLN A 628 1 10 HELIX 10 AB1 SER A 664 ASN A 670 1 7 HELIX 11 AB2 ASN A 687 CYS A 691 5 5 HELIX 12 AB3 PHE A 693 GLU A 695 5 3 HELIX 13 AB4 MET A 700 CYS A 704 5 5 HELIX 14 AB5 SER A 813 LEU A 818 1 6 HELIX 15 AB6 ARG A 890 ARG A 895 1 6 HELIX 16 AB7 ASN A 1070 VAL A 1074 5 5 HELIX 17 AB8 VAL A 1131 LEU A 1135 5 5 SHEET 1 AA1 4 ARG A 40 VAL A 43 0 SHEET 2 AA1 4 GLN A 504 PRO A 509 -1 O GLN A 507 N ARG A 40 SHEET 3 AA1 4 TYR A 496 THR A 501 -1 N ALA A 499 O THR A 506 SHEET 4 AA1 4 ILE A 484 LEU A 490 -1 N LEU A 485 O MET A 500 SHEET 1 AA2 4 LEU A 49 VAL A 54 0 SHEET 2 AA2 4 VAL A 61 ALA A 65 -1 O GLY A 64 N THR A 50 SHEET 3 AA2 4 ARG A 68 LEU A 72 -1 O LEU A 72 N VAL A 61 SHEET 4 AA2 4 LEU A 78 VAL A 83 -1 O LEU A 79 N LYS A 71 SHEET 1 AA3 2 VAL A 87 ASP A 89 0 SHEET 2 AA3 2 GLY A 107 THR A 109 -1 O THR A 109 N VAL A 87 SHEET 1 AA4 4 LEU A 117 ASP A 119 0 SHEET 2 AA4 4 ARG A 124 LEU A 126 -1 O LEU A 126 N LEU A 117 SHEET 3 AA4 4 PHE A 138 ARG A 140 -1 O LEU A 139 N LEU A 125 SHEET 4 AA4 4 LYS A 146 GLY A 148 -1 O LEU A 147 N PHE A 138 SHEET 1 AA5 4 ALA A 168 ILE A 172 0 SHEET 2 AA5 4 LYS A 182 GLY A 186 -1 O LYS A 182 N ILE A 172 SHEET 3 AA5 4 LEU A 199 ARG A 203 -1 O ARG A 202 N LEU A 183 SHEET 4 AA5 4 GLN A 226 LEU A 227 -1 O LEU A 227 N LEU A 199 SHEET 1 AA6 5 TYR A 243 SER A 250 0 SHEET 2 AA6 5 PHE A 253 GLN A 260 -1 O PHE A 253 N SER A 250 SHEET 3 AA6 5 THR A 277 CYS A 284 -1 O LYS A 279 N THR A 258 SHEET 4 AA6 5 VAL A 294 GLU A 301 -1 O ILE A 298 N SER A 278 SHEET 5 AA6 5 ILE A 419 GLU A 420 1 O ILE A 419 N PRO A 297 SHEET 1 AA7 8 TYR A 243 SER A 250 0 SHEET 2 AA7 8 PHE A 253 GLN A 260 -1 O PHE A 253 N SER A 250 SHEET 3 AA7 8 THR A 277 CYS A 284 -1 O LYS A 279 N THR A 258 SHEET 4 AA7 8 VAL A 294 GLU A 301 -1 O ILE A 298 N SER A 278 SHEET 5 AA7 8 GLU A 306 SER A 316 -1 O TYR A 307 N CYS A 300 SHEET 6 AA7 8 VAL A 334 GLN A 341 -1 O VAL A 338 N GLN A 311 SHEET 7 AA7 8 SER A 353 THR A 359 -1 O PHE A 358 N LEU A 335 SHEET 8 AA7 8 PHE A 425 ASP A 427 -1 O PHE A 425 N LEU A 355 SHEET 1 AA8 4 LEU A 432 TYR A 440 0 SHEET 2 AA8 4 ARG A 443 THR A 450 -1 O PHE A 447 N ALA A 436 SHEET 3 AA8 4 ARG A 454 LEU A 459 -1 O ILE A 458 N VAL A 446 SHEET 4 AA8 4 ALA A 470 VAL A 476 -1 O TYR A 473 N LYS A 457 SHEET 1 AA9 3 CYS A 539 SER A 540 0 SHEET 2 AA9 3 GLY A 531 CYS A 533 -1 N GLY A 531 O SER A 540 SHEET 3 AA9 3 PHE A 554 ALA A 555 -1 O ALA A 555 N TRP A 532 SHEET 1 AB1 4 GLN A 563 VAL A 566 0 SHEET 2 AB1 4 PRO A 579 TRP A 585 -1 O GLN A 583 N THR A 565 SHEET 3 AB1 4 ARG A 612 HIS A 616 -1 O ILE A 613 N LEU A 582 SHEET 4 AB1 4 ILE A 607 GLU A 609 -1 N ILE A 607 O HIS A 614 SHEET 1 AB2 5 ASN A 570 SER A 572 0 SHEET 2 AB2 5 LYS A 648 TYR A 657 1 O VAL A 655 N VAL A 571 SHEET 3 AB2 5 GLN A 633 SER A 642 -1 N VAL A 636 O PHE A 654 SHEET 4 AB2 5 VAL A 594 GLU A 599 -1 N SER A 597 O TYR A 639 SHEET 5 AB2 5 THR A 602 GLU A 605 -1 O THR A 604 N CYS A 596 SHEET 1 AB3 3 VAL A 683 THR A 685 0 SHEET 2 AB3 3 HIS A 676 CYS A 678 -1 N HIS A 676 O THR A 685 SHEET 3 AB3 3 ARG A 697 VAL A 698 -1 O VAL A 698 N TRP A 677 SHEET 1 AB4 5 ILE A 713 PRO A 716 0 SHEET 2 AB4 5 GLN A 801 TYR A 805 1 O HIS A 803 N VAL A 715 SHEET 3 AB4 5 ASP A 779 TRP A 788 -1 N LEU A 780 O LEU A 804 SHEET 4 AB4 5 TYR A 740 HIS A 745 -1 N GLU A 741 O VAL A 787 SHEET 5 AB4 5 ALA A 751 THR A 754 -1 O VAL A 753 N CYS A 742 SHEET 1 AB5 4 ILE A 713 PRO A 716 0 SHEET 2 AB5 4 GLN A 801 TYR A 805 1 O HIS A 803 N VAL A 715 SHEET 3 AB5 4 ASP A 779 TRP A 788 -1 N LEU A 780 O LEU A 804 SHEET 4 AB5 4 PHE A 792 VAL A 793 -1 O PHE A 792 N TRP A 788 SHEET 1 AB6 2 LYS A 721 ALA A 726 0 SHEET 2 AB6 2 SER A 762 SER A 768 -1 O SER A 768 N LYS A 721 SHEET 1 AB7 3 ARG A 834 CYS A 835 0 SHEET 2 AB7 3 TRP A 828 CYS A 829 -1 N CYS A 829 O ARG A 834 SHEET 3 AB7 3 TRP A 849 MET A 850 -1 O MET A 850 N TRP A 828 SHEET 1 AB8 7 ILE A 864 SER A 868 0 SHEET 2 AB8 7 ARG A 879 GLY A 884 -1 O THR A 881 N SER A 868 SHEET 3 AB8 7 GLN A 917 ILE A 922 -1 O CYS A 920 N LEU A 880 SHEET 4 AB8 7 VAL A 903 PRO A 907 -1 N SER A 906 O GLU A 921 SHEET 5 AB8 7 HIS A 899 VAL A 900 -1 N VAL A 900 O VAL A 903 SHEET 6 AB8 7 VAL A 935 CYS A 938 -1 O GLU A 936 N HIS A 899 SHEET 7 AB8 7 ARG A 947 LEU A 949 -1 O ALA A 948 N VAL A 937 SHEET 1 AB9 3 THR A 871 PRO A 873 0 SHEET 2 AB9 3 PHE A 954 VAL A 957 1 O VAL A 957 N GLY A 872 SHEET 3 AB9 3 ASP A 932 ALA A 933 -1 N ALA A 933 O PHE A 954 SHEET 1 AC1 4 THR A 960 VAL A 964 0 SHEET 2 AC1 4 TRP A 976 SER A 982 -1 O SER A 982 N THR A 960 SHEET 3 AC1 4 GLU A1008 LEU A1012 -1 O CYS A1011 N ILE A 977 SHEET 4 AC1 4 SER A1000 ARG A1004 -1 N SER A1000 O LEU A1012 SHEET 1 AC2 3 ARG A 968 PRO A 970 0 SHEET 2 AC2 3 TYR A1040 THR A1043 1 O THR A1043 N GLY A 969 SHEET 3 AC2 3 GLY A1020 ALA A1022 -1 N GLY A1020 O TYR A1042 SHEET 1 AC3 4 ARG A 997 PRO A 998 0 SHEET 2 AC3 4 VAL A 990 ILE A 994 -1 N ILE A 994 O ARG A 997 SHEET 3 AC3 4 ILE A1024 ILE A1028 -1 O VAL A1025 N SER A 993 SHEET 4 AC3 4 ALA A1031 LEU A1033 -1 O ALA A1031 N ILE A1028 SHEET 1 AC4 6 THR A1047 ILE A1051 0 SHEET 2 AC4 6 LEU A1063 THR A1069 -1 O THR A1067 N ARG A1050 SHEET 3 AC4 6 THR A1099 ARG A1103 -1 O CYS A1102 N LEU A1064 SHEET 4 AC4 6 ILE A1086 VAL A1094 -1 N MET A1093 O VAL A1101 SHEET 5 AC4 6 ARG A1078 TYR A1083 -1 N ALA A1081 O ARG A1088 SHEET 6 AC4 6 GLU A1123 ILE A1127 -1 O ILE A1127 N ARG A1078 SHEET 1 AC5 2 TRP A1055 ILE A1057 0 SHEET 2 AC5 2 LEU A1143 TYR A1145 1 O TYR A1145 N SER A1056 SHEET 1 AC6 3 LEU A1167 LYS A1170 0 SHEET 2 AC6 3 GLN A1203 CYS A1206 -1 O LEU A1204 N LEU A1169 SHEET 3 AC6 3 THR A1198 VAL A1199 -1 N THR A1198 O LEU A1205 SHEET 1 AC7 4 THR A1193 PRO A1194 0 SHEET 2 AC7 4 TYR A1186 ILE A1190 -1 N ILE A1190 O THR A1193 SHEET 3 AC7 4 VAL A1217 ALA A1221 -1 O THR A1218 N LEU A1189 SHEET 4 AC7 4 GLU A1225 PHE A1226 -1 O PHE A1226 N VAL A1219 SSBOND 1 CYS A 93 CYS A 102 1555 1555 2.03 SSBOND 2 CYS A 128 CYS A 136 1555 1555 2.03 SSBOND 3 CYS A 284 CYS A 405 1555 1555 2.04 SSBOND 4 CYS A 300 CYS A 356 1555 1555 2.03 SSBOND 5 CYS A 374 CYS A 393 1555 1555 2.04 SSBOND 6 CYS A 513 CYS A 530 1555 1555 2.04 SSBOND 7 CYS A 519 CYS A 561 1555 1555 2.04 SSBOND 8 CYS A 522 CYS A 539 1555 1555 2.03 SSBOND 9 CYS A 533 CYS A 545 1555 1555 2.04 SSBOND 10 CYS A 596 CYS A 615 1555 1555 2.04 SSBOND 11 CYS A 659 CYS A 675 1555 1555 2.04 SSBOND 12 CYS A 665 CYS A 704 1555 1555 2.04 SSBOND 13 CYS A 668 CYS A 684 1555 1555 2.03 SSBOND 14 CYS A 678 CYS A 691 1555 1555 2.04 SSBOND 15 CYS A 742 CYS A 765 1555 1555 2.03 SSBOND 16 CYS A 807 CYS A 826 1555 1555 2.04 SSBOND 17 CYS A 814 CYS A 859 1555 1555 2.03 SSBOND 18 CYS A 817 CYS A 835 1555 1555 2.03 SSBOND 19 CYS A 829 CYS A 841 1555 1555 2.03 SSBOND 20 CYS A 905 CYS A 920 1555 1555 2.04 SSBOND 21 CYS A 938 CYS A 942 1555 1555 2.05 SSBOND 22 CYS A 999 CYS A 1011 1555 1555 2.04 SSBOND 23 CYS A 1092 CYS A 1102 1555 1555 2.04 SSBOND 24 CYS A 1195 CYS A 1206 1555 1555 2.04 LINK ND2 ASN A 75 C1 NAG B 1 1555 1555 1.44 LINK ND2 ASN A 570 C1 NAG C 1 1555 1555 1.43 LINK ND2 ASN A 595 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN A 658 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN A 670 C1 NAG F 1 1555 1555 1.44 LINK ND2 ASN A 759 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN A 767 C1 NAG A1334 1555 1555 1.45 LINK ND2 ASN A 783 C1 NAG H 1 1555 1555 1.45 LINK ND2 ASN A1041 C1 NAG I 1 1555 1555 1.44 LINK ND2 ASN A1096 C1 NAG J 1 1555 1555 1.41 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.45 LINK O3 BMA B 3 C1 MAN B 4 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.45 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.45 LINK O6 BMA C 3 C1 MAN C 4 1555 1555 1.44 LINK O3 BMA C 3 C1 MAN C 6 1555 1555 1.45 LINK O3 MAN C 4 C1 MAN C 5 1555 1555 1.45 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.45 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.46 LINK O3 BMA D 3 C1 MAN D 4 1555 1555 1.45 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.44 LINK O6 BMA E 3 C1 MAN E 4 1555 1555 1.45 LINK O3 BMA E 3 C1 MAN E 7 1555 1555 1.45 LINK O3 MAN E 4 C1 MAN E 5 1555 1555 1.45 LINK O6 MAN E 4 C1 MAN E 6 1555 1555 1.45 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.45 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.44 LINK O6 BMA F 3 C1 MAN F 4 1555 1555 1.45 LINK O3 BMA F 3 C1 MAN F 7 1555 1555 1.45 LINK O3 MAN F 4 C1 MAN F 5 1555 1555 1.45 LINK O6 MAN F 4 C1 MAN F 6 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.44 LINK O3 BMA G 3 C1 MAN G 4 1555 1555 1.45 LINK O6 BMA G 3 C1 MAN G 5 1555 1555 1.45 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.46 LINK O4 NAG H 2 C1 BMA H 3 1555 1555 1.45 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.45 LINK O4 NAG I 2 C1 BMA I 3 1555 1555 1.45 LINK O6 BMA I 3 C1 MAN I 4 1555 1555 1.45 LINK O3 BMA I 3 C1 MAN I 6 1555 1555 1.44 LINK O3 MAN I 4 C1 MAN I 5 1555 1555 1.45 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.45 LINK O4 NAG J 2 C1 BMA J 3 1555 1555 1.44 LINK O6 BMA J 3 C1 MAN J 4 1555 1555 1.45 LINK O3 BMA J 3 C1 MAN J 7 1555 1555 1.45 LINK O3 MAN J 4 C1 MAN J 5 1555 1555 1.45 LINK O6 MAN J 4 C1 MAN J 6 1555 1555 1.44 CRYST1 195.343 195.343 176.180 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005119 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005119 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005676 0.00000