data_5LDA # _entry.id 5LDA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.357 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5LDA pdb_00005lda 10.2210/pdb5lda/pdb WWPDB D_1200000504 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5LDA _pdbx_database_status.recvd_initial_deposition_date 2016-06-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Cao, S.' 1 ? 'Engilberge, S.' 2 ? 'Girard, E.' 3 ? 'Gabel, F.' 4 ? 'Franzetti, B.' 5 ? 'Maupin-Furlow, J.A.' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Structure _citation.journal_id_ASTM STRUE6 _citation.journal_id_CSD 2005 _citation.journal_id_ISSN 1878-4186 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 25 _citation.language ? _citation.page_first 823 _citation.page_last 833.e6 _citation.title 'Structural Insight into Ubiquitin-Like Protein Recognition and Oligomeric States of JAMM/MPN(+) Proteases.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.str.2017.04.002 _citation.pdbx_database_id_PubMed 28479062 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cao, S.' 1 ? primary 'Engilberge, S.' 2 ? primary 'Girard, E.' 3 ? primary 'Gabel, F.' 4 ? primary 'Franzetti, B.' 5 ? primary 'Maupin-Furlow, J.A.' 6 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 97.30 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5LDA _cell.details ? _cell.formula_units_Z ? _cell.length_a 47.110 _cell.length_a_esd ? _cell.length_b 37.233 _cell.length_b_esd ? _cell.length_c 59.528 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LDA _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man JAMM1 15155.082 1 ? ? ? ? 2 polymer man SAMP2 7838.676 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 5 water nat water 18.015 91 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;(MSE)STLIIPQHYLRAILKVVSSSSVEVCGFLFGKENRVLKVRFIRNRLNSPVEFE(MSE)DPEE(MSE)LKALEEAEQ ENLEVVGIFHSHIACPPIPSGKDLEG(MSE)KRWPVIWLIVNEKGEYKAWILSEKNKISEVKIVVE ; ;MSTLIIPQHYLRAILKVVSSSSVEVCGFLFGKENRVLKVRFIRNRLNSPVEFEMDPEEMLKALEEAEQENLEVVGIFHSH IACPPIPSGKDLEGMKRWPVIWLIVNEKGEYKAWILSEKNKISEVKIVVE ; A ? 2 'polypeptide(L)' no yes ;(MSE)K(MSE)IKVKVIGRNIEKEIEWREG(MSE)KVRDILRAVGFNTESAIAKVNGKVVLEDDEVKDGDFVEVIPVVSG G ; MKMIKVKVIGRNIEKEIEWREGMKVRDILRAVGFNTESAIAKVNGKVVLEDDEVKDGDFVEVIPVVSGG B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 SER n 1 3 THR n 1 4 LEU n 1 5 ILE n 1 6 ILE n 1 7 PRO n 1 8 GLN n 1 9 HIS n 1 10 TYR n 1 11 LEU n 1 12 ARG n 1 13 ALA n 1 14 ILE n 1 15 LEU n 1 16 LYS n 1 17 VAL n 1 18 VAL n 1 19 SER n 1 20 SER n 1 21 SER n 1 22 SER n 1 23 VAL n 1 24 GLU n 1 25 VAL n 1 26 CYS n 1 27 GLY n 1 28 PHE n 1 29 LEU n 1 30 PHE n 1 31 GLY n 1 32 LYS n 1 33 GLU n 1 34 ASN n 1 35 ARG n 1 36 VAL n 1 37 LEU n 1 38 LYS n 1 39 VAL n 1 40 ARG n 1 41 PHE n 1 42 ILE n 1 43 ARG n 1 44 ASN n 1 45 ARG n 1 46 LEU n 1 47 ASN n 1 48 SER n 1 49 PRO n 1 50 VAL n 1 51 GLU n 1 52 PHE n 1 53 GLU n 1 54 MSE n 1 55 ASP n 1 56 PRO n 1 57 GLU n 1 58 GLU n 1 59 MSE n 1 60 LEU n 1 61 LYS n 1 62 ALA n 1 63 LEU n 1 64 GLU n 1 65 GLU n 1 66 ALA n 1 67 GLU n 1 68 GLN n 1 69 GLU n 1 70 ASN n 1 71 LEU n 1 72 GLU n 1 73 VAL n 1 74 VAL n 1 75 GLY n 1 76 ILE n 1 77 PHE n 1 78 HIS n 1 79 SER n 1 80 HIS n 1 81 ILE n 1 82 ALA n 1 83 CYS n 1 84 PRO n 1 85 PRO n 1 86 ILE n 1 87 PRO n 1 88 SER n 1 89 GLY n 1 90 LYS n 1 91 ASP n 1 92 LEU n 1 93 GLU n 1 94 GLY n 1 95 MSE n 1 96 LYS n 1 97 ARG n 1 98 TRP n 1 99 PRO n 1 100 VAL n 1 101 ILE n 1 102 TRP n 1 103 LEU n 1 104 ILE n 1 105 VAL n 1 106 ASN n 1 107 GLU n 1 108 LYS n 1 109 GLY n 1 110 GLU n 1 111 TYR n 1 112 LYS n 1 113 ALA n 1 114 TRP n 1 115 ILE n 1 116 LEU n 1 117 SER n 1 118 GLU n 1 119 LYS n 1 120 ASN n 1 121 LYS n 1 122 ILE n 1 123 SER n 1 124 GLU n 1 125 VAL n 1 126 LYS n 1 127 ILE n 1 128 VAL n 1 129 VAL n 1 130 GLU n 2 1 MSE n 2 2 LYS n 2 3 MSE n 2 4 ILE n 2 5 LYS n 2 6 VAL n 2 7 LYS n 2 8 VAL n 2 9 ILE n 2 10 GLY n 2 11 ARG n 2 12 ASN n 2 13 ILE n 2 14 GLU n 2 15 LYS n 2 16 GLU n 2 17 ILE n 2 18 GLU n 2 19 TRP n 2 20 ARG n 2 21 GLU n 2 22 GLY n 2 23 MSE n 2 24 LYS n 2 25 VAL n 2 26 ARG n 2 27 ASP n 2 28 ILE n 2 29 LEU n 2 30 ARG n 2 31 ALA n 2 32 VAL n 2 33 GLY n 2 34 PHE n 2 35 ASN n 2 36 THR n 2 37 GLU n 2 38 SER n 2 39 ALA n 2 40 ILE n 2 41 ALA n 2 42 LYS n 2 43 VAL n 2 44 ASN n 2 45 GLY n 2 46 LYS n 2 47 VAL n 2 48 VAL n 2 49 LEU n 2 50 GLU n 2 51 ASP n 2 52 ASP n 2 53 GLU n 2 54 VAL n 2 55 LYS n 2 56 ASP n 2 57 GLY n 2 58 ASP n 2 59 PHE n 2 60 VAL n 2 61 GLU n 2 62 VAL n 2 63 ILE n 2 64 PRO n 2 65 VAL n 2 66 VAL n 2 67 SER n 2 68 GLY n 2 69 GLY n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 130 ? ? PF1070 ? ? ? ? ? ? 'Pyrococcus furiosus' 186497 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 69 ? ? PF1061 ? ? ? ? ? ? 'Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)' 186497 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP Q8U1Y4_PYRFU Q8U1Y4 ? 1 ;STLIIPQHYLRAILKVVSSSSVEVCGFLFGKENRVLKVRFIRNRLNSPVEFEMDPEEMLKALEEAEQENLEVVGIFHSHI ACPPIPSGKDLEGMKRWPVIWLIVNEKGEYKAWILSEKNKISEVKIVVE ; 12 2 UNP Q8U1Z3_PYRFU Q8U1Z3 ? 2 KMIKVKVIGRNIEKEIEWREGMKVRDILRAVGFNTESAIAKVNGKVVLEDDEVKDGDFVEVIPVVSGG 2 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5LDA A 2 ? 130 ? Q8U1Y4 12 ? 140 ? 12 140 2 2 5LDA B 2 ? 69 ? Q8U1Z3 2 ? 69 ? 2 69 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5LDA MSE A 1 ? UNP Q8U1Y4 ? ? 'initiating methionine' 11 1 2 5LDA MSE B 1 ? UNP Q8U1Z3 ? ? 'initiating methionine' 1 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5LDA _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.18 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 43.62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM Bis-Tris,200 mM NaCl, 25 % PEG3350, 10 % Glycerol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-04-24 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97939 1.0 2 0.97947 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID30B' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list '0.97939, 0.97947' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID30B _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5LDA _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.900 _reflns.d_resolution_low 46.730 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 16059 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.900 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.8400 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 2.01 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.99 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all 4515 _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.557 _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5LDA _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.90 _refine.ls_d_res_low 46.73 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 16046 _refine.ls_number_reflns_R_free 803 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.7 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.176 _refine.ls_R_factor_R_free 0.211 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.174 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.090 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.210 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1479 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 91 _refine_hist.number_atoms_total 1577 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 46.73 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.005 ? 1507 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.641 ? 2030 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 17.645 ? 926 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.056 ? 234 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 258 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.9003 2.0194 . . 126 2381 93.00 . . . 0.2950 . 0.2643 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0194 2.1753 . . 134 2544 99.00 . . . 0.2266 . 0.2065 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1753 2.3942 . . 134 2543 98.00 . . . 0.2368 . 0.1894 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3942 2.7406 . . 135 2571 99.00 . . . 0.1771 . 0.1796 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7406 3.4527 . . 135 2563 99.00 . . . 0.2268 . 0.1791 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4527 46.7427 . . 139 2641 98.00 . . . 0.1938 . 0.1514 . . . . . . . . . . # _struct.entry_id 5LDA _struct.title 'Structure of deubiquitinating enzyme homolog (Pyrococcus furiosus JAMM1) in complex with ubiquitin-like SAMP2.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5LDA _struct_keywords.text 'JAMM/MPN+, metalloprotease, deubiquitination, ubiquitin-like protein, cell cycle' _struct_keywords.pdbx_keywords 'CELL CYCLE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLN A 8 ? SER A 20 ? GLN A 18 SER A 30 1 ? 13 HELX_P HELX_P2 AA2 ASP A 55 ? GLU A 69 ? ASP A 65 GLU A 79 1 ? 15 HELX_P HELX_P3 AA3 SER A 88 ? TRP A 98 ? SER A 98 TRP A 108 1 ? 11 HELX_P HELX_P4 AA4 LYS B 24 ? VAL B 32 ? LYS B 24 VAL B 32 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 1 C ? ? ? 1_555 A SER 2 N ? ? A MSE 11 A SER 12 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale2 covale both ? A GLU 53 C ? ? ? 1_555 A MSE 54 N ? ? A GLU 63 A MSE 64 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale3 covale both ? A MSE 54 C ? ? ? 1_555 A ASP 55 N ? ? A MSE 64 A ASP 65 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale4 covale both ? A GLU 58 C ? ? ? 1_555 A MSE 59 N ? ? A GLU 68 A MSE 69 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale5 covale both ? A MSE 59 C ? ? ? 1_555 A LEU 60 N ? ? A MSE 69 A LEU 70 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale6 covale both ? A GLY 94 C ? ? ? 1_555 A MSE 95 N ? ? A GLY 104 A MSE 105 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale7 covale both ? A MSE 95 C ? ? ? 1_555 A LYS 96 N ? ? A MSE 105 A LYS 106 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale8 covale both ? B MSE 23 C ? ? ? 1_555 B LYS 24 N ? ? B MSE 23 B LYS 24 1_555 ? ? ? ? ? ? ? 1.328 ? ? metalc1 metalc ? ? A HIS 78 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 88 A ZN 201 1_555 ? ? ? ? ? ? ? 2.168 ? ? metalc2 metalc ? ? A HIS 80 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 90 A ZN 201 1_555 ? ? ? ? ? ? ? 1.971 ? ? metalc3 metalc ? ? A ASP 91 OD2 ? ? ? 1_555 C ZN . ZN ? ? A ASP 101 A ZN 201 1_555 ? ? ? ? ? ? ? 2.087 ? ? metalc4 metalc ? ? C ZN . ZN ? ? ? 1_555 B GLY 69 OXT ? ? A ZN 201 B GLY 69 1_555 ? ? ? ? ? ? ? 2.087 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 2 ? AA3 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? parallel AA2 1 2 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 3 ? PRO A 7 ? THR A 13 PRO A 17 AA1 2 ARG A 35 ? ILE A 42 ? ARG A 45 ILE A 52 AA1 3 CYS A 26 ? LYS A 32 ? CYS A 36 LYS A 42 AA1 4 GLU A 72 ? HIS A 80 ? GLU A 82 HIS A 90 AA1 5 ILE A 101 ? ASN A 106 ? ILE A 111 ASN A 116 AA1 6 TYR A 111 ? LEU A 116 ? TYR A 121 LEU A 126 AA1 7 ILE A 122 ? GLU A 130 ? ILE A 132 GLU A 140 AA1 8 THR A 3 ? PRO A 7 ? THR A 13 PRO A 17 AA2 1 PHE A 52 ? GLU A 53 ? PHE A 62 GLU A 63 AA2 2 SER B 67 ? GLY B 68 ? SER B 67 GLY B 68 AA3 1 VAL B 6 ? VAL B 8 ? VAL B 6 VAL B 8 AA3 2 VAL B 60 ? PRO B 64 ? VAL B 60 PRO B 64 AA3 3 ALA B 39 ? VAL B 43 ? ALA B 39 VAL B 43 AA3 4 LYS B 46 ? VAL B 48 ? LYS B 46 VAL B 48 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 5 ? N ILE A 15 O VAL A 36 ? O VAL A 46 AA1 2 3 O ILE A 42 ? O ILE A 52 N CYS A 26 ? N CYS A 36 AA1 3 4 N LEU A 29 ? N LEU A 39 O GLY A 75 ? O GLY A 85 AA1 4 5 N ILE A 76 ? N ILE A 86 O LEU A 103 ? O LEU A 113 AA1 5 6 N ILE A 104 ? N ILE A 114 O LYS A 112 ? O LYS A 122 AA1 6 7 N ALA A 113 ? N ALA A 123 O VAL A 125 ? O VAL A 135 AA1 7 8 O VAL A 128 ? O VAL A 138 N LEU A 4 ? N LEU A 14 AA2 1 2 N PHE A 52 ? N PHE A 62 O GLY B 68 ? O GLY B 68 AA3 1 2 N LYS B 7 ? N LYS B 7 O VAL B 62 ? O VAL B 62 AA3 2 3 O ILE B 63 ? O ILE B 63 N ILE B 40 ? N ILE B 40 AA3 3 4 N VAL B 43 ? N VAL B 43 O LYS B 46 ? O LYS B 46 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 201 ? 4 'binding site for residue ZN A 201' AC2 Software B GOL 601 ? 4 'binding site for residue GOL B 601' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 78 ? HIS A 88 . ? 1_555 ? 2 AC1 4 HIS A 80 ? HIS A 90 . ? 1_555 ? 3 AC1 4 ASP A 91 ? ASP A 101 . ? 1_555 ? 4 AC1 4 GLY B 69 ? GLY B 69 . ? 1_555 ? 5 AC2 4 GLU A 67 ? GLU A 77 . ? 1_555 ? 6 AC2 4 ILE B 9 ? ILE B 9 . ? 1_555 ? 7 AC2 4 LYS B 42 ? LYS B 42 . ? 1_555 ? 8 AC2 4 GLU B 61 ? GLU B 61 . ? 1_555 ? # _atom_sites.entry_id 5LDA _atom_sites.fract_transf_matrix[1][1] 0.021227 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002718 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026858 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016936 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S SE ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 11 11 MSE MSE A . n A 1 2 SER 2 12 12 SER SER A . n A 1 3 THR 3 13 13 THR THR A . n A 1 4 LEU 4 14 14 LEU LEU A . n A 1 5 ILE 5 15 15 ILE ILE A . n A 1 6 ILE 6 16 16 ILE ILE A . n A 1 7 PRO 7 17 17 PRO PRO A . n A 1 8 GLN 8 18 18 GLN GLN A . n A 1 9 HIS 9 19 19 HIS HIS A . n A 1 10 TYR 10 20 20 TYR TYR A . n A 1 11 LEU 11 21 21 LEU LEU A . n A 1 12 ARG 12 22 22 ARG ARG A . n A 1 13 ALA 13 23 23 ALA ALA A . n A 1 14 ILE 14 24 24 ILE ILE A . n A 1 15 LEU 15 25 25 LEU LEU A . n A 1 16 LYS 16 26 26 LYS LYS A . n A 1 17 VAL 17 27 27 VAL VAL A . n A 1 18 VAL 18 28 28 VAL VAL A . n A 1 19 SER 19 29 29 SER SER A . n A 1 20 SER 20 30 30 SER SER A . n A 1 21 SER 21 31 31 SER SER A . n A 1 22 SER 22 32 32 SER SER A . n A 1 23 VAL 23 33 33 VAL VAL A . n A 1 24 GLU 24 34 34 GLU GLU A . n A 1 25 VAL 25 35 35 VAL VAL A . n A 1 26 CYS 26 36 36 CYS CYS A . n A 1 27 GLY 27 37 37 GLY GLY A . n A 1 28 PHE 28 38 38 PHE PHE A . n A 1 29 LEU 29 39 39 LEU LEU A . n A 1 30 PHE 30 40 40 PHE PHE A . n A 1 31 GLY 31 41 41 GLY GLY A . n A 1 32 LYS 32 42 42 LYS LYS A . n A 1 33 GLU 33 43 43 GLU GLU A . n A 1 34 ASN 34 44 44 ASN ASN A . n A 1 35 ARG 35 45 45 ARG ARG A . n A 1 36 VAL 36 46 46 VAL VAL A . n A 1 37 LEU 37 47 47 LEU LEU A . n A 1 38 LYS 38 48 48 LYS LYS A . n A 1 39 VAL 39 49 49 VAL VAL A . n A 1 40 ARG 40 50 50 ARG ARG A . n A 1 41 PHE 41 51 51 PHE PHE A . n A 1 42 ILE 42 52 52 ILE ILE A . n A 1 43 ARG 43 53 53 ARG ARG A . n A 1 44 ASN 44 54 54 ASN ASN A . n A 1 45 ARG 45 55 55 ARG ARG A . n A 1 46 LEU 46 56 56 LEU LEU A . n A 1 47 ASN 47 57 57 ASN ASN A . n A 1 48 SER 48 58 58 SER SER A . n A 1 49 PRO 49 59 59 PRO PRO A . n A 1 50 VAL 50 60 60 VAL VAL A . n A 1 51 GLU 51 61 61 GLU GLU A . n A 1 52 PHE 52 62 62 PHE PHE A . n A 1 53 GLU 53 63 63 GLU GLU A . n A 1 54 MSE 54 64 64 MSE MSE A . n A 1 55 ASP 55 65 65 ASP ASP A . n A 1 56 PRO 56 66 66 PRO PRO A . n A 1 57 GLU 57 67 67 GLU GLU A . n A 1 58 GLU 58 68 68 GLU GLU A . n A 1 59 MSE 59 69 69 MSE MSE A . n A 1 60 LEU 60 70 70 LEU LEU A . n A 1 61 LYS 61 71 71 LYS LYS A . n A 1 62 ALA 62 72 72 ALA ALA A . n A 1 63 LEU 63 73 73 LEU LEU A . n A 1 64 GLU 64 74 74 GLU GLU A . n A 1 65 GLU 65 75 75 GLU GLU A . n A 1 66 ALA 66 76 76 ALA ALA A . n A 1 67 GLU 67 77 77 GLU GLU A . n A 1 68 GLN 68 78 78 GLN GLN A . n A 1 69 GLU 69 79 79 GLU GLU A . n A 1 70 ASN 70 80 80 ASN ASN A . n A 1 71 LEU 71 81 81 LEU LEU A . n A 1 72 GLU 72 82 82 GLU GLU A . n A 1 73 VAL 73 83 83 VAL VAL A . n A 1 74 VAL 74 84 84 VAL VAL A . n A 1 75 GLY 75 85 85 GLY GLY A . n A 1 76 ILE 76 86 86 ILE ILE A . n A 1 77 PHE 77 87 87 PHE PHE A . n A 1 78 HIS 78 88 88 HIS HIS A . n A 1 79 SER 79 89 89 SER SER A . n A 1 80 HIS 80 90 90 HIS HIS A . n A 1 81 ILE 81 91 91 ILE ILE A . n A 1 82 ALA 82 92 92 ALA ALA A . n A 1 83 CYS 83 93 93 CYS CYS A . n A 1 84 PRO 84 94 94 PRO PRO A . n A 1 85 PRO 85 95 95 PRO PRO A . n A 1 86 ILE 86 96 96 ILE ILE A . n A 1 87 PRO 87 97 97 PRO PRO A . n A 1 88 SER 88 98 98 SER SER A . n A 1 89 GLY 89 99 99 GLY GLY A . n A 1 90 LYS 90 100 100 LYS LYS A . n A 1 91 ASP 91 101 101 ASP ASP A . n A 1 92 LEU 92 102 102 LEU LEU A . n A 1 93 GLU 93 103 103 GLU GLU A . n A 1 94 GLY 94 104 104 GLY GLY A . n A 1 95 MSE 95 105 105 MSE MSE A . n A 1 96 LYS 96 106 106 LYS LYS A . n A 1 97 ARG 97 107 107 ARG ARG A . n A 1 98 TRP 98 108 108 TRP TRP A . n A 1 99 PRO 99 109 109 PRO PRO A . n A 1 100 VAL 100 110 110 VAL VAL A . n A 1 101 ILE 101 111 111 ILE ILE A . n A 1 102 TRP 102 112 112 TRP TRP A . n A 1 103 LEU 103 113 113 LEU LEU A . n A 1 104 ILE 104 114 114 ILE ILE A . n A 1 105 VAL 105 115 115 VAL VAL A . n A 1 106 ASN 106 116 116 ASN ASN A . n A 1 107 GLU 107 117 117 GLU GLU A . n A 1 108 LYS 108 118 118 LYS LYS A . n A 1 109 GLY 109 119 119 GLY GLY A . n A 1 110 GLU 110 120 120 GLU GLU A . n A 1 111 TYR 111 121 121 TYR TYR A . n A 1 112 LYS 112 122 122 LYS LYS A . n A 1 113 ALA 113 123 123 ALA ALA A . n A 1 114 TRP 114 124 124 TRP TRP A . n A 1 115 ILE 115 125 125 ILE ILE A . n A 1 116 LEU 116 126 126 LEU LEU A . n A 1 117 SER 117 127 127 SER SER A . n A 1 118 GLU 118 128 128 GLU GLU A . n A 1 119 LYS 119 129 129 LYS LYS A . n A 1 120 ASN 120 130 130 ASN ASN A . n A 1 121 LYS 121 131 131 LYS LYS A . n A 1 122 ILE 122 132 132 ILE ILE A . n A 1 123 SER 123 133 133 SER SER A . n A 1 124 GLU 124 134 134 GLU GLU A . n A 1 125 VAL 125 135 135 VAL VAL A . n A 1 126 LYS 126 136 136 LYS LYS A . n A 1 127 ILE 127 137 137 ILE ILE A . n A 1 128 VAL 128 138 138 VAL VAL A . n A 1 129 VAL 129 139 139 VAL VAL A . n A 1 130 GLU 130 140 140 GLU GLU A . n B 2 1 MSE 1 1 ? ? ? B . n B 2 2 LYS 2 2 ? ? ? B . n B 2 3 MSE 3 3 ? ? ? B . n B 2 4 ILE 4 4 ? ? ? B . n B 2 5 LYS 5 5 5 LYS LYS B . n B 2 6 VAL 6 6 6 VAL VAL B . n B 2 7 LYS 7 7 7 LYS LYS B . n B 2 8 VAL 8 8 8 VAL VAL B . n B 2 9 ILE 9 9 9 ILE ILE B . n B 2 10 GLY 10 10 10 GLY GLY B . n B 2 11 ARG 11 11 11 ARG ARG B . n B 2 12 ASN 12 12 12 ASN ASN B . n B 2 13 ILE 13 13 13 ILE ILE B . n B 2 14 GLU 14 14 14 GLU GLU B . n B 2 15 LYS 15 15 ? ? ? B . n B 2 16 GLU 16 16 ? ? ? B . n B 2 17 ILE 17 17 ? ? ? B . n B 2 18 GLU 18 18 ? ? ? B . n B 2 19 TRP 19 19 ? ? ? B . n B 2 20 ARG 20 20 ? ? ? B . n B 2 21 GLU 21 21 ? ? ? B . n B 2 22 GLY 22 22 ? ? ? B . n B 2 23 MSE 23 23 23 MSE MSE B . n B 2 24 LYS 24 24 24 LYS LYS B . n B 2 25 VAL 25 25 25 VAL VAL B . n B 2 26 ARG 26 26 26 ARG ARG B . n B 2 27 ASP 27 27 27 ASP ASP B . n B 2 28 ILE 28 28 28 ILE ILE B . n B 2 29 LEU 29 29 29 LEU LEU B . n B 2 30 ARG 30 30 30 ARG ARG B . n B 2 31 ALA 31 31 31 ALA ALA B . n B 2 32 VAL 32 32 32 VAL VAL B . n B 2 33 GLY 33 33 33 GLY GLY B . n B 2 34 PHE 34 34 34 PHE PHE B . n B 2 35 ASN 35 35 35 ASN ASN B . n B 2 36 THR 36 36 36 THR THR B . n B 2 37 GLU 37 37 37 GLU GLU B . n B 2 38 SER 38 38 38 SER SER B . n B 2 39 ALA 39 39 39 ALA ALA B . n B 2 40 ILE 40 40 40 ILE ILE B . n B 2 41 ALA 41 41 41 ALA ALA B . n B 2 42 LYS 42 42 42 LYS LYS B . n B 2 43 VAL 43 43 43 VAL VAL B . n B 2 44 ASN 44 44 44 ASN ASN B . n B 2 45 GLY 45 45 45 GLY GLY B . n B 2 46 LYS 46 46 46 LYS LYS B . n B 2 47 VAL 47 47 47 VAL VAL B . n B 2 48 VAL 48 48 48 VAL VAL B . n B 2 49 LEU 49 49 49 LEU LEU B . n B 2 50 GLU 50 50 50 GLU GLU B . n B 2 51 ASP 51 51 51 ASP ASP B . n B 2 52 ASP 52 52 52 ASP ASP B . n B 2 53 GLU 53 53 53 GLU GLU B . n B 2 54 VAL 54 54 54 VAL VAL B . n B 2 55 LYS 55 55 55 LYS LYS B . n B 2 56 ASP 56 56 56 ASP ASP B . n B 2 57 GLY 57 57 57 GLY GLY B . n B 2 58 ASP 58 58 58 ASP ASP B . n B 2 59 PHE 59 59 59 PHE PHE B . n B 2 60 VAL 60 60 60 VAL VAL B . n B 2 61 GLU 61 61 61 GLU GLU B . n B 2 62 VAL 62 62 62 VAL VAL B . n B 2 63 ILE 63 63 63 ILE ILE B . n B 2 64 PRO 64 64 64 PRO PRO B . n B 2 65 VAL 65 65 65 VAL VAL B . n B 2 66 VAL 66 66 66 VAL VAL B . n B 2 67 SER 67 67 67 SER SER B . n B 2 68 GLY 68 68 68 GLY GLY B . n B 2 69 GLY 69 69 69 GLY GLY B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 201 201 ZN ZN A . D 4 GOL 1 601 601 GOL GOL B . E 5 HOH 1 301 301 HOH HOH A . E 5 HOH 2 302 302 HOH HOH A . E 5 HOH 3 303 303 HOH HOH A . E 5 HOH 4 304 304 HOH HOH A . E 5 HOH 5 305 305 HOH HOH A . E 5 HOH 6 306 306 HOH HOH A . E 5 HOH 7 307 307 HOH HOH A . E 5 HOH 8 308 308 HOH HOH A . E 5 HOH 9 309 309 HOH HOH A . E 5 HOH 10 310 310 HOH HOH A . E 5 HOH 11 311 311 HOH HOH A . E 5 HOH 12 312 312 HOH HOH A . E 5 HOH 13 313 313 HOH HOH A . E 5 HOH 14 314 314 HOH HOH A . E 5 HOH 15 315 315 HOH HOH A . E 5 HOH 16 316 316 HOH HOH A . E 5 HOH 17 317 317 HOH HOH A . E 5 HOH 18 318 318 HOH HOH A . E 5 HOH 19 319 319 HOH HOH A . E 5 HOH 20 320 320 HOH HOH A . E 5 HOH 21 321 321 HOH HOH A . E 5 HOH 22 322 322 HOH HOH A . E 5 HOH 23 323 323 HOH HOH A . E 5 HOH 24 324 324 HOH HOH A . E 5 HOH 25 325 326 HOH HOH A . E 5 HOH 26 326 327 HOH HOH A . E 5 HOH 27 327 328 HOH HOH A . E 5 HOH 28 328 329 HOH HOH A . E 5 HOH 29 329 330 HOH HOH A . E 5 HOH 30 330 331 HOH HOH A . E 5 HOH 31 331 332 HOH HOH A . E 5 HOH 32 332 333 HOH HOH A . E 5 HOH 33 333 334 HOH HOH A . E 5 HOH 34 334 335 HOH HOH A . E 5 HOH 35 335 336 HOH HOH A . E 5 HOH 36 336 337 HOH HOH A . E 5 HOH 37 337 338 HOH HOH A . E 5 HOH 38 338 339 HOH HOH A . E 5 HOH 39 339 340 HOH HOH A . E 5 HOH 40 340 341 HOH HOH A . E 5 HOH 41 341 342 HOH HOH A . E 5 HOH 42 342 343 HOH HOH A . E 5 HOH 43 343 344 HOH HOH A . E 5 HOH 44 344 345 HOH HOH A . E 5 HOH 45 345 346 HOH HOH A . E 5 HOH 46 346 347 HOH HOH A . E 5 HOH 47 347 348 HOH HOH A . E 5 HOH 48 348 349 HOH HOH A . E 5 HOH 49 349 350 HOH HOH A . E 5 HOH 50 350 351 HOH HOH A . E 5 HOH 51 351 352 HOH HOH A . E 5 HOH 52 352 353 HOH HOH A . E 5 HOH 53 353 354 HOH HOH A . E 5 HOH 54 354 355 HOH HOH A . E 5 HOH 55 355 356 HOH HOH A . E 5 HOH 56 356 357 HOH HOH A . E 5 HOH 57 357 358 HOH HOH A . E 5 HOH 58 358 359 HOH HOH A . E 5 HOH 59 359 360 HOH HOH A . E 5 HOH 60 360 361 HOH HOH A . E 5 HOH 61 361 362 HOH HOH A . E 5 HOH 62 362 363 HOH HOH A . E 5 HOH 63 363 364 HOH HOH A . E 5 HOH 64 364 365 HOH HOH A . E 5 HOH 65 365 367 HOH HOH A . E 5 HOH 66 366 366 HOH HOH A . E 5 HOH 67 367 368 HOH HOH A . E 5 HOH 68 368 369 HOH HOH A . E 5 HOH 69 369 370 HOH HOH A . E 5 HOH 70 370 373 HOH HOH A . E 5 HOH 71 371 371 HOH HOH A . E 5 HOH 72 372 372 HOH HOH A . E 5 HOH 73 373 374 HOH HOH A . E 5 HOH 74 374 375 HOH HOH A . E 5 HOH 75 375 376 HOH HOH A . E 5 HOH 76 376 377 HOH HOH A . E 5 HOH 77 377 378 HOH HOH A . E 5 HOH 78 378 379 HOH HOH A . E 5 HOH 79 379 380 HOH HOH A . E 5 HOH 80 380 381 HOH HOH A . E 5 HOH 81 381 382 HOH HOH A . E 5 HOH 82 382 383 HOH HOH A . F 5 HOH 1 701 701 HOH HOH B . F 5 HOH 2 702 702 HOH HOH B . F 5 HOH 3 703 703 HOH HOH B . F 5 HOH 4 704 704 HOH HOH B . F 5 HOH 5 705 705 HOH HOH B . F 5 HOH 6 706 706 HOH HOH B . F 5 HOH 7 707 707 HOH HOH B . F 5 HOH 8 708 708 HOH HOH B . F 5 HOH 9 709 709 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 54 A MSE 64 ? MET 'modified residue' 2 A MSE 59 A MSE 69 ? MET 'modified residue' 3 A MSE 95 A MSE 105 ? MET 'modified residue' 4 B MSE 23 B MSE 23 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2200 ? 1 MORE -50 ? 1 'SSA (A^2)' 9390 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 78 ? A HIS 88 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 NE2 ? A HIS 80 ? A HIS 90 ? 1_555 110.3 ? 2 NE2 ? A HIS 78 ? A HIS 88 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 OD2 ? A ASP 91 ? A ASP 101 ? 1_555 100.6 ? 3 NE2 ? A HIS 80 ? A HIS 90 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 OD2 ? A ASP 91 ? A ASP 101 ? 1_555 123.2 ? 4 NE2 ? A HIS 78 ? A HIS 88 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 OXT ? B GLY 69 ? B GLY 69 ? 1_555 125.5 ? 5 NE2 ? A HIS 80 ? A HIS 90 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 OXT ? B GLY 69 ? B GLY 69 ? 1_555 95.8 ? 6 OD2 ? A ASP 91 ? A ASP 101 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 OXT ? B GLY 69 ? B GLY 69 ? 1_555 103.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-06-21 2 'Structure model' 1 1 2017-08-30 3 'Structure model' 1 2 2022-03-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 3 'Structure model' database_2 3 3 'Structure model' pdbx_audit_support 4 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_pdbx_audit_support.funding_organization' 5 3 'Structure model' '_struct_conn.conn_type_id' 6 3 'Structure model' '_struct_conn.id' 7 3 'Structure model' '_struct_conn.pdbx_dist_value' 8 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 9 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 10 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 11 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 12 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 13 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 14 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 15 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 16 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 17 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 18 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 19 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 20 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 21 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 22 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 18.9653 16.3462 59.6465 0.2980 0.2019 0.4054 0.0011 0.0238 -0.0635 7.5316 3.3524 5.1418 -4.4935 4.7292 -4.0250 0.0595 -0.0272 -0.2275 0.3781 0.0312 0.0396 -0.3714 -0.0361 -0.0130 'X-RAY DIFFRACTION' 2 ? refined 24.0235 9.1639 54.4046 0.2287 0.2406 0.3026 -0.0297 0.0004 -0.0364 7.7406 6.5362 2.5958 -2.8766 0.7763 -0.3497 0.1063 0.3173 -0.5772 -0.2865 -0.1773 0.3239 0.0756 -0.0185 0.0112 'X-RAY DIFFRACTION' 3 ? refined 33.1568 3.1388 52.9400 0.3501 0.3603 0.4035 0.0225 0.0343 -0.0369 5.3431 6.6574 5.3422 0.3136 5.2637 -0.7501 0.4050 0.3448 -0.5169 -0.6050 -0.3036 -0.1362 0.7484 -0.2441 -0.2584 'X-RAY DIFFRACTION' 4 ? refined 19.2961 8.5363 43.3640 0.5481 0.5695 0.4727 -0.0054 -0.1464 -0.0376 8.1410 3.5165 7.9321 -1.8837 3.0648 3.7978 0.2977 1.0343 -0.6504 -0.8925 -0.3428 0.4389 0.3278 -0.0480 -0.0256 'X-RAY DIFFRACTION' 5 ? refined 34.3251 14.5788 59.5875 0.2789 0.2431 0.2340 -0.0069 -0.0212 -0.0101 6.1672 6.4183 4.0858 3.3129 -1.9492 -1.5834 0.2121 -0.2262 -0.1599 0.3360 -0.2236 -0.6563 -0.2218 0.4538 0.0117 'X-RAY DIFFRACTION' 6 ? refined 32.4397 16.0051 53.0259 0.2966 0.3353 0.3097 -0.0209 0.0253 -0.0319 6.0090 6.9624 2.5155 0.8438 -1.1111 -3.5957 -0.0448 0.3780 -0.0259 -0.4400 -0.1920 -0.5085 -0.3271 0.6833 0.2988 'X-RAY DIFFRACTION' 7 ? refined 28.8726 24.0771 55.0228 0.2817 0.2782 0.2586 -0.0283 -0.0346 0.0346 6.7761 7.1976 4.3448 1.1516 -1.4733 -1.3952 0.0592 0.3738 1.0688 -0.4184 0.2131 0.3688 0.0387 0.2852 -0.1593 'X-RAY DIFFRACTION' 8 ? refined 30.1588 13.1134 34.9084 0.8335 1.0973 0.3453 -0.0401 -0.1137 0.0565 2.6325 6.6468 5.1661 1.8708 2.5239 5.6238 0.3238 1.5181 -0.0123 -0.8073 -0.2876 0.3184 -1.1160 -0.3737 -0.2674 'X-RAY DIFFRACTION' 9 ? refined 35.6676 5.4008 28.5579 1.4091 1.2859 0.6384 0.2371 0.0590 0.1026 0.5581 1.6949 0.1703 0.8902 0.0569 -0.0881 -0.0347 0.9886 0.0563 -0.9103 0.2481 -0.6253 0.1783 0.5682 -0.3620 'X-RAY DIFFRACTION' 10 ? refined 36.8953 3.3399 35.3597 0.7855 1.1094 0.4219 0.0743 0.1313 -0.0665 2.2783 9.7969 3.8551 3.3301 2.9196 4.8259 -0.4916 1.6333 -0.8140 -0.7427 0.5040 -1.4087 1.2543 0.5699 -0.2546 'X-RAY DIFFRACTION' 11 ? refined 32.4424 -3.0789 29.3907 1.1667 0.8280 0.7517 0.0336 -0.0672 -0.1200 6.9921 3.2994 5.6360 -4.6536 1.3709 -1.9460 0.7063 0.8702 -0.8921 -1.6124 -0.7054 -0.3128 1.7663 -0.2629 0.4661 'X-RAY DIFFRACTION' 12 ? refined 31.3382 6.9716 38.7189 0.5517 0.8590 0.3878 0.0686 0.0319 -0.0141 0.6140 5.5095 4.8840 -0.1645 -1.6197 2.5293 0.4645 1.4479 0.1445 -1.0929 0.3786 -0.1373 0.0118 0.5719 -0.9520 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 11:27)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 28:56)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 57:68)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 69:85)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 86:100)' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 101:118)' 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 119:140)' 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? '(CHAIN B AND RESID 5:12)' 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? '(CHAIN B AND RESID 13:25)' 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? '(CHAIN B AND RESID 26:44)' 'X-RAY DIFFRACTION' 11 11 ? ? ? ? ? ? ? ? ? '(CHAIN B AND RESID 45:57)' 'X-RAY DIFFRACTION' 12 12 ? ? ? ? ? ? ? ? ? '(CHAIN B AND RESID 58:69)' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.10_2155: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? autoSHARP ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 320 ? ? O A HOH 351 ? ? 1.77 2 1 O A HOH 374 ? ? O B HOH 703 ? ? 1.95 3 1 O A HOH 348 ? ? O A HOH 358 ? ? 1.97 4 1 O A HOH 349 ? ? O A HOH 359 ? ? 2.11 5 1 O A HOH 353 ? ? O A HOH 356 ? ? 2.12 6 1 O A HOH 350 ? ? O A HOH 354 ? ? 2.13 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 305 ? ? 1_555 O A HOH 357 ? ? 2_647 1.80 2 1 O A HOH 370 ? ? 1_555 O A HOH 375 ? ? 2_657 1.88 3 1 O A HOH 358 ? ? 1_555 O A HOH 370 ? ? 2_647 2.06 4 1 O A HOH 348 ? ? 1_555 O A HOH 365 ? ? 2_647 2.11 5 1 O A HOH 374 ? ? 1_555 O A HOH 377 ? ? 2_757 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 43 ? ? 61.07 -113.24 2 1 VAL A 110 ? ? -118.22 -169.00 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B LYS 5 ? CG ? B LYS 5 CG 2 1 Y 1 B LYS 5 ? CD ? B LYS 5 CD 3 1 Y 1 B LYS 5 ? CE ? B LYS 5 CE 4 1 Y 1 B LYS 5 ? NZ ? B LYS 5 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B MSE 1 ? B MSE 1 2 1 Y 1 B LYS 2 ? B LYS 2 3 1 Y 1 B MSE 3 ? B MSE 3 4 1 Y 1 B ILE 4 ? B ILE 4 5 1 Y 1 B LYS 15 ? B LYS 15 6 1 Y 1 B GLU 16 ? B GLU 16 7 1 Y 1 B ILE 17 ? B ILE 17 8 1 Y 1 B GLU 18 ? B GLU 18 9 1 Y 1 B TRP 19 ? B TRP 19 10 1 Y 1 B ARG 20 ? B ARG 20 11 1 Y 1 B GLU 21 ? B GLU 21 12 1 Y 1 B GLY 22 ? B GLY 22 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'French National Research Agency' France 'ANR-13-BS07-0007-02 Ln23' 1 'French National Research Agency' France ANR-12-BSV8-0019-0 2 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' 'R01 GM57498-15' 3 'Department of Energy (DOE, United States)' 'United States' DE-FG02-05ER15650 4 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 GLYCEROL GOL 5 water HOH #