data_5LF5 # _entry.id 5LF5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5LF5 pdb_00005lf5 10.2210/pdb5lf5/pdb WWPDB D_1200000630 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-12-14 2 'Structure model' 1 1 2017-09-13 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2024-01-10 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Database references' 9 4 'Structure model' 'Derived calculations' 10 4 'Structure model' 'Refinement description' 11 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 3 'Structure model' atom_site 3 3 'Structure model' chem_comp 4 3 'Structure model' database_PDB_caveat 5 3 'Structure model' entity 6 3 'Structure model' pdbx_branch_scheme 7 3 'Structure model' pdbx_chem_comp_identifier 8 3 'Structure model' pdbx_entity_branch 9 3 'Structure model' pdbx_entity_branch_descriptor 10 3 'Structure model' pdbx_entity_branch_link 11 3 'Structure model' pdbx_entity_branch_list 12 3 'Structure model' pdbx_entity_nonpoly 13 3 'Structure model' pdbx_nonpoly_scheme 14 3 'Structure model' pdbx_struct_assembly_gen 15 3 'Structure model' pdbx_validate_chiral 16 3 'Structure model' pdbx_validate_close_contact 17 3 'Structure model' struct_asym 18 3 'Structure model' struct_conn 19 3 'Structure model' struct_site 20 3 'Structure model' struct_site_gen 21 4 'Structure model' chem_comp 22 4 'Structure model' chem_comp_atom 23 4 'Structure model' chem_comp_bond 24 4 'Structure model' database_2 25 4 'Structure model' pdbx_initial_refinement_model 26 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 3 'Structure model' '_atom_site.B_iso_or_equiv' 3 3 'Structure model' '_atom_site.Cartn_x' 4 3 'Structure model' '_atom_site.Cartn_y' 5 3 'Structure model' '_atom_site.Cartn_z' 6 3 'Structure model' '_atom_site.auth_asym_id' 7 3 'Structure model' '_atom_site.auth_atom_id' 8 3 'Structure model' '_atom_site.auth_comp_id' 9 3 'Structure model' '_atom_site.auth_seq_id' 10 3 'Structure model' '_atom_site.label_asym_id' 11 3 'Structure model' '_atom_site.label_atom_id' 12 3 'Structure model' '_atom_site.label_comp_id' 13 3 'Structure model' '_atom_site.label_entity_id' 14 3 'Structure model' '_atom_site.type_symbol' 15 3 'Structure model' '_chem_comp.name' 16 3 'Structure model' '_chem_comp.type' 17 3 'Structure model' '_database_PDB_caveat.text' 18 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 19 3 'Structure model' '_pdbx_validate_chiral.auth_asym_id' 20 3 'Structure model' '_pdbx_validate_chiral.auth_seq_id' 21 3 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1' 22 3 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 23 3 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 24 3 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 25 3 'Structure model' '_struct_conn.pdbx_role' 26 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 27 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 4 'Structure model' '_chem_comp.pdbx_synonyms' 33 4 'Structure model' '_database_2.pdbx_DOI' 34 4 'Structure model' '_database_2.pdbx_database_accession' 35 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _database_PDB_caveat.id 1 _database_PDB_caveat.text 'NAG B 1 HAS WRONG CHIRALITY AT ATOM C1' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5LF5 _pdbx_database_status.recvd_initial_deposition_date 2016-06-30 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pronker, M.F.' 1 'Janssen, B.J.C.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 7 _citation.language ? _citation.page_first 13584 _citation.page_last 13584 _citation.title 'Structural basis of myelin-associated glycoprotein adhesion and signalling.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/ncomms13584 _citation.pdbx_database_id_PubMed 27922006 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pronker, M.F.' 1 ? primary 'Lemstra, S.' 2 ? primary 'Snijder, J.' 3 ? primary 'Heck, A.J.' 4 ? primary 'Thies-Weesie, D.M.' 5 ? primary 'Pasterkamp, R.J.' 6 ? primary 'Janssen, B.J.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Myelin-associated glycoprotein' 55192.984 1 ? ? ? ;The two C-terminal residues of the construct and the cloning sites and purification tag are not observed in the electron density, probably because of disorder ; 2 branched man 'alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose' 367.349 1 ? ? ? ? 3 branched man 'N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose' 674.604 1 ? ? ? ? 4 non-polymer man alpha-D-mannopyranose 180.156 1 ? ? ? ? 5 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 4 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Siglec-4a # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSGHWGAWMPSTISAFEGTCVSIPCRFDFPDELRPAVVHGVWYFNSPYPKNYPPVVFKSRTQVVHESFQGRSRLLGDLGL RNCTLLLSTLSPELGGKYYFRGDLGGYNQYTFSEHSVLDIVNTPNIVVPPEVVAGTEVEVSCMVPDNCPELRPELSWLGH EGLGEPTVLGRLREDEGTWVQVSLLHFVPTREANGHRLGCQAAFPNTTLQFEGYASLDVKYPPVIVEMNSSVEAIEGSHV SLLCGADSNPPPLLTWMRDGMVLREAVAKSLYLDLEEVTPGEDGVYACLAENAYGQDNRTVELSVMYAPWKPTVNGTVVA VEGETVSILCSTQSNPDPILTIFKEKQILATVIYESQLQLELPAVTPEDDGEYWCVAENQYGQRATAFNLSVEFAPIILL ESHCAAARDTVQCLCVVKSNPEPSVAFELPSRNVTVNETEREFVYSERSGLLLTSILTIRGQAQAPPRVICTSRNLYGTQ SLELPFQGAHRAAAHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;GSGHWGAWMPSTISAFEGTCVSIPCRFDFPDELRPAVVHGVWYFNSPYPKNYPPVVFKSRTQVVHESFQGRSRLLGDLGL RNCTLLLSTLSPELGGKYYFRGDLGGYNQYTFSEHSVLDIVNTPNIVVPPEVVAGTEVEVSCMVPDNCPELRPELSWLGH EGLGEPTVLGRLREDEGTWVQVSLLHFVPTREANGHRLGCQAAFPNTTLQFEGYASLDVKYPPVIVEMNSSVEAIEGSHV SLLCGADSNPPPLLTWMRDGMVLREAVAKSLYLDLEEVTPGEDGVYACLAENAYGQDNRTVELSVMYAPWKPTVNGTVVA VEGETVSILCSTQSNPDPILTIFKEKQILATVIYESQLQLELPAVTPEDDGEYWCVAENQYGQRATAFNLSVEFAPIILL ESHCAAARDTVQCLCVVKSNPEPSVAFELPSRNVTVNETEREFVYSERSGLLLTSILTIRGQAQAPPRVICTSRNLYGTQ SLELPFQGAHRAAAHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 alpha-D-mannopyranose MAN 5 2-acetamido-2-deoxy-beta-D-glucopyranose NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 GLY n 1 4 HIS n 1 5 TRP n 1 6 GLY n 1 7 ALA n 1 8 TRP n 1 9 MET n 1 10 PRO n 1 11 SER n 1 12 THR n 1 13 ILE n 1 14 SER n 1 15 ALA n 1 16 PHE n 1 17 GLU n 1 18 GLY n 1 19 THR n 1 20 CYS n 1 21 VAL n 1 22 SER n 1 23 ILE n 1 24 PRO n 1 25 CYS n 1 26 ARG n 1 27 PHE n 1 28 ASP n 1 29 PHE n 1 30 PRO n 1 31 ASP n 1 32 GLU n 1 33 LEU n 1 34 ARG n 1 35 PRO n 1 36 ALA n 1 37 VAL n 1 38 VAL n 1 39 HIS n 1 40 GLY n 1 41 VAL n 1 42 TRP n 1 43 TYR n 1 44 PHE n 1 45 ASN n 1 46 SER n 1 47 PRO n 1 48 TYR n 1 49 PRO n 1 50 LYS n 1 51 ASN n 1 52 TYR n 1 53 PRO n 1 54 PRO n 1 55 VAL n 1 56 VAL n 1 57 PHE n 1 58 LYS n 1 59 SER n 1 60 ARG n 1 61 THR n 1 62 GLN n 1 63 VAL n 1 64 VAL n 1 65 HIS n 1 66 GLU n 1 67 SER n 1 68 PHE n 1 69 GLN n 1 70 GLY n 1 71 ARG n 1 72 SER n 1 73 ARG n 1 74 LEU n 1 75 LEU n 1 76 GLY n 1 77 ASP n 1 78 LEU n 1 79 GLY n 1 80 LEU n 1 81 ARG n 1 82 ASN n 1 83 CYS n 1 84 THR n 1 85 LEU n 1 86 LEU n 1 87 LEU n 1 88 SER n 1 89 THR n 1 90 LEU n 1 91 SER n 1 92 PRO n 1 93 GLU n 1 94 LEU n 1 95 GLY n 1 96 GLY n 1 97 LYS n 1 98 TYR n 1 99 TYR n 1 100 PHE n 1 101 ARG n 1 102 GLY n 1 103 ASP n 1 104 LEU n 1 105 GLY n 1 106 GLY n 1 107 TYR n 1 108 ASN n 1 109 GLN n 1 110 TYR n 1 111 THR n 1 112 PHE n 1 113 SER n 1 114 GLU n 1 115 HIS n 1 116 SER n 1 117 VAL n 1 118 LEU n 1 119 ASP n 1 120 ILE n 1 121 VAL n 1 122 ASN n 1 123 THR n 1 124 PRO n 1 125 ASN n 1 126 ILE n 1 127 VAL n 1 128 VAL n 1 129 PRO n 1 130 PRO n 1 131 GLU n 1 132 VAL n 1 133 VAL n 1 134 ALA n 1 135 GLY n 1 136 THR n 1 137 GLU n 1 138 VAL n 1 139 GLU n 1 140 VAL n 1 141 SER n 1 142 CYS n 1 143 MET n 1 144 VAL n 1 145 PRO n 1 146 ASP n 1 147 ASN n 1 148 CYS n 1 149 PRO n 1 150 GLU n 1 151 LEU n 1 152 ARG n 1 153 PRO n 1 154 GLU n 1 155 LEU n 1 156 SER n 1 157 TRP n 1 158 LEU n 1 159 GLY n 1 160 HIS n 1 161 GLU n 1 162 GLY n 1 163 LEU n 1 164 GLY n 1 165 GLU n 1 166 PRO n 1 167 THR n 1 168 VAL n 1 169 LEU n 1 170 GLY n 1 171 ARG n 1 172 LEU n 1 173 ARG n 1 174 GLU n 1 175 ASP n 1 176 GLU n 1 177 GLY n 1 178 THR n 1 179 TRP n 1 180 VAL n 1 181 GLN n 1 182 VAL n 1 183 SER n 1 184 LEU n 1 185 LEU n 1 186 HIS n 1 187 PHE n 1 188 VAL n 1 189 PRO n 1 190 THR n 1 191 ARG n 1 192 GLU n 1 193 ALA n 1 194 ASN n 1 195 GLY n 1 196 HIS n 1 197 ARG n 1 198 LEU n 1 199 GLY n 1 200 CYS n 1 201 GLN n 1 202 ALA n 1 203 ALA n 1 204 PHE n 1 205 PRO n 1 206 ASN n 1 207 THR n 1 208 THR n 1 209 LEU n 1 210 GLN n 1 211 PHE n 1 212 GLU n 1 213 GLY n 1 214 TYR n 1 215 ALA n 1 216 SER n 1 217 LEU n 1 218 ASP n 1 219 VAL n 1 220 LYS n 1 221 TYR n 1 222 PRO n 1 223 PRO n 1 224 VAL n 1 225 ILE n 1 226 VAL n 1 227 GLU n 1 228 MET n 1 229 ASN n 1 230 SER n 1 231 SER n 1 232 VAL n 1 233 GLU n 1 234 ALA n 1 235 ILE n 1 236 GLU n 1 237 GLY n 1 238 SER n 1 239 HIS n 1 240 VAL n 1 241 SER n 1 242 LEU n 1 243 LEU n 1 244 CYS n 1 245 GLY n 1 246 ALA n 1 247 ASP n 1 248 SER n 1 249 ASN n 1 250 PRO n 1 251 PRO n 1 252 PRO n 1 253 LEU n 1 254 LEU n 1 255 THR n 1 256 TRP n 1 257 MET n 1 258 ARG n 1 259 ASP n 1 260 GLY n 1 261 MET n 1 262 VAL n 1 263 LEU n 1 264 ARG n 1 265 GLU n 1 266 ALA n 1 267 VAL n 1 268 ALA n 1 269 LYS n 1 270 SER n 1 271 LEU n 1 272 TYR n 1 273 LEU n 1 274 ASP n 1 275 LEU n 1 276 GLU n 1 277 GLU n 1 278 VAL n 1 279 THR n 1 280 PRO n 1 281 GLY n 1 282 GLU n 1 283 ASP n 1 284 GLY n 1 285 VAL n 1 286 TYR n 1 287 ALA n 1 288 CYS n 1 289 LEU n 1 290 ALA n 1 291 GLU n 1 292 ASN n 1 293 ALA n 1 294 TYR n 1 295 GLY n 1 296 GLN n 1 297 ASP n 1 298 ASN n 1 299 ARG n 1 300 THR n 1 301 VAL n 1 302 GLU n 1 303 LEU n 1 304 SER n 1 305 VAL n 1 306 MET n 1 307 TYR n 1 308 ALA n 1 309 PRO n 1 310 TRP n 1 311 LYS n 1 312 PRO n 1 313 THR n 1 314 VAL n 1 315 ASN n 1 316 GLY n 1 317 THR n 1 318 VAL n 1 319 VAL n 1 320 ALA n 1 321 VAL n 1 322 GLU n 1 323 GLY n 1 324 GLU n 1 325 THR n 1 326 VAL n 1 327 SER n 1 328 ILE n 1 329 LEU n 1 330 CYS n 1 331 SER n 1 332 THR n 1 333 GLN n 1 334 SER n 1 335 ASN n 1 336 PRO n 1 337 ASP n 1 338 PRO n 1 339 ILE n 1 340 LEU n 1 341 THR n 1 342 ILE n 1 343 PHE n 1 344 LYS n 1 345 GLU n 1 346 LYS n 1 347 GLN n 1 348 ILE n 1 349 LEU n 1 350 ALA n 1 351 THR n 1 352 VAL n 1 353 ILE n 1 354 TYR n 1 355 GLU n 1 356 SER n 1 357 GLN n 1 358 LEU n 1 359 GLN n 1 360 LEU n 1 361 GLU n 1 362 LEU n 1 363 PRO n 1 364 ALA n 1 365 VAL n 1 366 THR n 1 367 PRO n 1 368 GLU n 1 369 ASP n 1 370 ASP n 1 371 GLY n 1 372 GLU n 1 373 TYR n 1 374 TRP n 1 375 CYS n 1 376 VAL n 1 377 ALA n 1 378 GLU n 1 379 ASN n 1 380 GLN n 1 381 TYR n 1 382 GLY n 1 383 GLN n 1 384 ARG n 1 385 ALA n 1 386 THR n 1 387 ALA n 1 388 PHE n 1 389 ASN n 1 390 LEU n 1 391 SER n 1 392 VAL n 1 393 GLU n 1 394 PHE n 1 395 ALA n 1 396 PRO n 1 397 ILE n 1 398 ILE n 1 399 LEU n 1 400 LEU n 1 401 GLU n 1 402 SER n 1 403 HIS n 1 404 CYS n 1 405 ALA n 1 406 ALA n 1 407 ALA n 1 408 ARG n 1 409 ASP n 1 410 THR n 1 411 VAL n 1 412 GLN n 1 413 CYS n 1 414 LEU n 1 415 CYS n 1 416 VAL n 1 417 VAL n 1 418 LYS n 1 419 SER n 1 420 ASN n 1 421 PRO n 1 422 GLU n 1 423 PRO n 1 424 SER n 1 425 VAL n 1 426 ALA n 1 427 PHE n 1 428 GLU n 1 429 LEU n 1 430 PRO n 1 431 SER n 1 432 ARG n 1 433 ASN n 1 434 VAL n 1 435 THR n 1 436 VAL n 1 437 ASN n 1 438 GLU n 1 439 THR n 1 440 GLU n 1 441 ARG n 1 442 GLU n 1 443 PHE n 1 444 VAL n 1 445 TYR n 1 446 SER n 1 447 GLU n 1 448 ARG n 1 449 SER n 1 450 GLY n 1 451 LEU n 1 452 LEU n 1 453 LEU n 1 454 THR n 1 455 SER n 1 456 ILE n 1 457 LEU n 1 458 THR n 1 459 ILE n 1 460 ARG n 1 461 GLY n 1 462 GLN n 1 463 ALA n 1 464 GLN n 1 465 ALA n 1 466 PRO n 1 467 PRO n 1 468 ARG n 1 469 VAL n 1 470 ILE n 1 471 CYS n 1 472 THR n 1 473 SER n 1 474 ARG n 1 475 ASN n 1 476 LEU n 1 477 TYR n 1 478 GLY n 1 479 THR n 1 480 GLN n 1 481 SER n 1 482 LEU n 1 483 GLU n 1 484 LEU n 1 485 PRO n 1 486 PHE n 1 487 GLN n 1 488 GLY n 1 489 ALA n 1 490 HIS n 1 491 ARG n 1 492 ALA n 1 493 ALA n 1 494 ALA n 1 495 HIS n 1 496 HIS n 1 497 HIS n 1 498 HIS n 1 499 HIS n 1 500 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 500 _entity_src_gen.gene_src_common_name 'House Mouse' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Mag _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name Human _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ kidney _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant 'GnTI-/- and EBNA1-expressing' _entity_src_gen.pdbx_host_org_cell_line HEK293 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell HEK293ES _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector pUPE _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pUPE107.03 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 LFucpa1-6DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,2,1/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-2/a6-b1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(6+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? 4 3 DNeup5Aca2-3DGalpb1-3DGalpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/3,3,2/[a2112h-1b_1-5_2*NCC/3=O][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3/a3-b1_b3-c2' WURCS PDB2Glycan 1.1.0 6 3 '[][b-D-GalpNAc]{[(3+1)][b-D-Galp]{[(3+2)][a-D-Neup5Ac]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 FUC C1 O1 1 NAG O6 HO6 sing ? 2 3 2 GAL C1 O1 1 NGA O3 HO3 sing ? 3 3 3 SIA C2 O2 2 GAL O3 HO3 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 NGA 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-galactopyranose ;N-acetyl-beta-D-galactosamine; 2-acetamido-2-deoxy-beta-D-galactose; 2-acetamido-2-deoxy-D-galactose; 2-acetamido-2-deoxy-galactose; N-ACETYL-D-GALACTOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SIA 'D-saccharide, alpha linking' . 'N-acetyl-alpha-neuraminic acid' 'N-acetylneuraminic acid; sialic acid; alpha-sialic acid; O-SIALIC ACID' 'C11 H19 N O9' 309.270 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc NGA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpNAcb NGA 'COMMON NAME' GMML 1.0 N-acetyl-b-D-galactopyranosamine NGA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GalpNAc NGA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalNAc SIA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DNeup5Aca SIA 'COMMON NAME' GMML 1.0 'N-acetyl-a-D-neuraminic acid' SIA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Neup5Ac SIA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Neu5Ac # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 18 ? ? ? A . n A 1 2 SER 2 19 ? ? ? A . n A 1 3 GLY 3 20 20 GLY GLY A . n A 1 4 HIS 4 21 21 HIS HIS A . n A 1 5 TRP 5 22 22 TRP TRP A . n A 1 6 GLY 6 23 23 GLY GLY A . n A 1 7 ALA 7 24 24 ALA ALA A . n A 1 8 TRP 8 25 25 TRP TRP A . n A 1 9 MET 9 26 26 MET MET A . n A 1 10 PRO 10 27 27 PRO PRO A . n A 1 11 SER 11 28 28 SER SER A . n A 1 12 THR 12 29 29 THR THR A . n A 1 13 ILE 13 30 30 ILE ILE A . n A 1 14 SER 14 31 31 SER SER A . n A 1 15 ALA 15 32 32 ALA ALA A . n A 1 16 PHE 16 33 33 PHE PHE A . n A 1 17 GLU 17 34 34 GLU GLU A . n A 1 18 GLY 18 35 35 GLY GLY A . n A 1 19 THR 19 36 36 THR THR A . n A 1 20 CYS 20 37 37 CYS CYS A . n A 1 21 VAL 21 38 38 VAL VAL A . n A 1 22 SER 22 39 39 SER SER A . n A 1 23 ILE 23 40 40 ILE ILE A . n A 1 24 PRO 24 41 41 PRO PRO A . n A 1 25 CYS 25 42 42 CYS CYS A . n A 1 26 ARG 26 43 43 ARG ARG A . n A 1 27 PHE 27 44 44 PHE PHE A . n A 1 28 ASP 28 45 45 ASP ASP A . n A 1 29 PHE 29 46 46 PHE PHE A . n A 1 30 PRO 30 47 47 PRO PRO A . n A 1 31 ASP 31 48 48 ASP ASP A . n A 1 32 GLU 32 49 49 GLU GLU A . n A 1 33 LEU 33 50 50 LEU LEU A . n A 1 34 ARG 34 51 51 ARG ARG A . n A 1 35 PRO 35 52 52 PRO PRO A . n A 1 36 ALA 36 53 53 ALA ALA A . n A 1 37 VAL 37 54 54 VAL VAL A . n A 1 38 VAL 38 55 55 VAL VAL A . n A 1 39 HIS 39 56 56 HIS HIS A . n A 1 40 GLY 40 57 57 GLY GLY A . n A 1 41 VAL 41 58 58 VAL VAL A . n A 1 42 TRP 42 59 59 TRP TRP A . n A 1 43 TYR 43 60 60 TYR TYR A . n A 1 44 PHE 44 61 61 PHE PHE A . n A 1 45 ASN 45 62 62 ASN ASN A . n A 1 46 SER 46 63 63 SER SER A . n A 1 47 PRO 47 64 64 PRO PRO A . n A 1 48 TYR 48 65 65 TYR TYR A . n A 1 49 PRO 49 66 66 PRO PRO A . n A 1 50 LYS 50 67 67 LYS LYS A . n A 1 51 ASN 51 68 68 ASN ASN A . n A 1 52 TYR 52 69 69 TYR TYR A . n A 1 53 PRO 53 70 70 PRO PRO A . n A 1 54 PRO 54 71 71 PRO PRO A . n A 1 55 VAL 55 72 72 VAL VAL A . n A 1 56 VAL 56 73 73 VAL VAL A . n A 1 57 PHE 57 74 74 PHE PHE A . n A 1 58 LYS 58 75 75 LYS LYS A . n A 1 59 SER 59 76 76 SER SER A . n A 1 60 ARG 60 77 77 ARG ARG A . n A 1 61 THR 61 78 78 THR THR A . n A 1 62 GLN 62 79 79 GLN GLN A . n A 1 63 VAL 63 80 80 VAL VAL A . n A 1 64 VAL 64 81 81 VAL VAL A . n A 1 65 HIS 65 82 82 HIS HIS A . n A 1 66 GLU 66 83 83 GLU GLU A . n A 1 67 SER 67 84 84 SER SER A . n A 1 68 PHE 68 85 85 PHE PHE A . n A 1 69 GLN 69 86 86 GLN GLN A . n A 1 70 GLY 70 87 87 GLY GLY A . n A 1 71 ARG 71 88 88 ARG ARG A . n A 1 72 SER 72 89 89 SER SER A . n A 1 73 ARG 73 90 90 ARG ARG A . n A 1 74 LEU 74 91 91 LEU LEU A . n A 1 75 LEU 75 92 92 LEU LEU A . n A 1 76 GLY 76 93 93 GLY GLY A . n A 1 77 ASP 77 94 94 ASP ASP A . n A 1 78 LEU 78 95 95 LEU LEU A . n A 1 79 GLY 79 96 96 GLY GLY A . n A 1 80 LEU 80 97 97 LEU LEU A . n A 1 81 ARG 81 98 98 ARG ARG A . n A 1 82 ASN 82 99 99 ASN ASN A . n A 1 83 CYS 83 100 100 CYS CYS A . n A 1 84 THR 84 101 101 THR THR A . n A 1 85 LEU 85 102 102 LEU LEU A . n A 1 86 LEU 86 103 103 LEU LEU A . n A 1 87 LEU 87 104 104 LEU LEU A . n A 1 88 SER 88 105 105 SER SER A . n A 1 89 THR 89 106 106 THR THR A . n A 1 90 LEU 90 107 107 LEU LEU A . n A 1 91 SER 91 108 108 SER SER A . n A 1 92 PRO 92 109 109 PRO PRO A . n A 1 93 GLU 93 110 110 GLU GLU A . n A 1 94 LEU 94 111 111 LEU LEU A . n A 1 95 GLY 95 112 112 GLY GLY A . n A 1 96 GLY 96 113 113 GLY GLY A . n A 1 97 LYS 97 114 114 LYS LYS A . n A 1 98 TYR 98 115 115 TYR TYR A . n A 1 99 TYR 99 116 116 TYR TYR A . n A 1 100 PHE 100 117 117 PHE PHE A . n A 1 101 ARG 101 118 118 ARG ARG A . n A 1 102 GLY 102 119 119 GLY GLY A . n A 1 103 ASP 103 120 120 ASP ASP A . n A 1 104 LEU 104 121 121 LEU LEU A . n A 1 105 GLY 105 122 122 GLY GLY A . n A 1 106 GLY 106 123 123 GLY GLY A . n A 1 107 TYR 107 124 124 TYR TYR A . n A 1 108 ASN 108 125 125 ASN ASN A . n A 1 109 GLN 109 126 126 GLN GLN A . n A 1 110 TYR 110 127 127 TYR TYR A . n A 1 111 THR 111 128 128 THR THR A . n A 1 112 PHE 112 129 129 PHE PHE A . n A 1 113 SER 113 130 130 SER SER A . n A 1 114 GLU 114 131 131 GLU GLU A . n A 1 115 HIS 115 132 132 HIS HIS A . n A 1 116 SER 116 133 133 SER SER A . n A 1 117 VAL 117 134 134 VAL VAL A . n A 1 118 LEU 118 135 135 LEU LEU A . n A 1 119 ASP 119 136 136 ASP ASP A . n A 1 120 ILE 120 137 137 ILE ILE A . n A 1 121 VAL 121 138 138 VAL VAL A . n A 1 122 ASN 122 139 139 ASN ASN A . n A 1 123 THR 123 140 140 THR THR A . n A 1 124 PRO 124 141 141 PRO PRO A . n A 1 125 ASN 125 142 142 ASN ASN A . n A 1 126 ILE 126 143 143 ILE ILE A . n A 1 127 VAL 127 144 144 VAL VAL A . n A 1 128 VAL 128 145 145 VAL VAL A . n A 1 129 PRO 129 146 146 PRO PRO A . n A 1 130 PRO 130 147 147 PRO PRO A . n A 1 131 GLU 131 148 148 GLU GLU A . n A 1 132 VAL 132 149 149 VAL VAL A . n A 1 133 VAL 133 150 150 VAL VAL A . n A 1 134 ALA 134 151 151 ALA ALA A . n A 1 135 GLY 135 152 152 GLY GLY A . n A 1 136 THR 136 153 153 THR THR A . n A 1 137 GLU 137 154 154 GLU GLU A . n A 1 138 VAL 138 155 155 VAL VAL A . n A 1 139 GLU 139 156 156 GLU GLU A . n A 1 140 VAL 140 157 157 VAL VAL A . n A 1 141 SER 141 158 158 SER SER A . n A 1 142 CYS 142 159 159 CYS CYS A . n A 1 143 MET 143 160 160 MET MET A . n A 1 144 VAL 144 161 161 VAL VAL A . n A 1 145 PRO 145 162 162 PRO PRO A . n A 1 146 ASP 146 163 163 ASP ASP A . n A 1 147 ASN 147 164 164 ASN ASN A . n A 1 148 CYS 148 165 165 CYS CYS A . n A 1 149 PRO 149 166 166 PRO PRO A . n A 1 150 GLU 150 167 167 GLU GLU A . n A 1 151 LEU 151 168 168 LEU LEU A . n A 1 152 ARG 152 169 169 ARG ARG A . n A 1 153 PRO 153 170 170 PRO PRO A . n A 1 154 GLU 154 171 171 GLU GLU A . n A 1 155 LEU 155 172 172 LEU LEU A . n A 1 156 SER 156 173 173 SER SER A . n A 1 157 TRP 157 174 174 TRP TRP A . n A 1 158 LEU 158 175 175 LEU LEU A . n A 1 159 GLY 159 176 176 GLY GLY A . n A 1 160 HIS 160 177 177 HIS HIS A . n A 1 161 GLU 161 178 178 GLU GLU A . n A 1 162 GLY 162 179 179 GLY GLY A . n A 1 163 LEU 163 180 180 LEU LEU A . n A 1 164 GLY 164 181 181 GLY GLY A . n A 1 165 GLU 165 182 182 GLU GLU A . n A 1 166 PRO 166 183 183 PRO PRO A . n A 1 167 THR 167 184 184 THR THR A . n A 1 168 VAL 168 185 185 VAL VAL A . n A 1 169 LEU 169 186 186 LEU LEU A . n A 1 170 GLY 170 187 187 GLY GLY A . n A 1 171 ARG 171 188 188 ARG ARG A . n A 1 172 LEU 172 189 189 LEU LEU A . n A 1 173 ARG 173 190 190 ARG ARG A . n A 1 174 GLU 174 191 191 GLU GLU A . n A 1 175 ASP 175 192 192 ASP ASP A . n A 1 176 GLU 176 193 193 GLU GLU A . n A 1 177 GLY 177 194 194 GLY GLY A . n A 1 178 THR 178 195 195 THR THR A . n A 1 179 TRP 179 196 196 TRP TRP A . n A 1 180 VAL 180 197 197 VAL VAL A . n A 1 181 GLN 181 198 198 GLN GLN A . n A 1 182 VAL 182 199 199 VAL VAL A . n A 1 183 SER 183 200 200 SER SER A . n A 1 184 LEU 184 201 201 LEU LEU A . n A 1 185 LEU 185 202 202 LEU LEU A . n A 1 186 HIS 186 203 203 HIS HIS A . n A 1 187 PHE 187 204 204 PHE PHE A . n A 1 188 VAL 188 205 205 VAL VAL A . n A 1 189 PRO 189 206 206 PRO PRO A . n A 1 190 THR 190 207 207 THR THR A . n A 1 191 ARG 191 208 208 ARG ARG A . n A 1 192 GLU 192 209 209 GLU GLU A . n A 1 193 ALA 193 210 210 ALA ALA A . n A 1 194 ASN 194 211 211 ASN ASN A . n A 1 195 GLY 195 212 212 GLY GLY A . n A 1 196 HIS 196 213 213 HIS HIS A . n A 1 197 ARG 197 214 214 ARG ARG A . n A 1 198 LEU 198 215 215 LEU LEU A . n A 1 199 GLY 199 216 216 GLY GLY A . n A 1 200 CYS 200 217 217 CYS CYS A . n A 1 201 GLN 201 218 218 GLN GLN A . n A 1 202 ALA 202 219 219 ALA ALA A . n A 1 203 ALA 203 220 220 ALA ALA A . n A 1 204 PHE 204 221 221 PHE PHE A . n A 1 205 PRO 205 222 222 PRO PRO A . n A 1 206 ASN 206 223 223 ASN ASN A . n A 1 207 THR 207 224 224 THR THR A . n A 1 208 THR 208 225 225 THR THR A . n A 1 209 LEU 209 226 226 LEU LEU A . n A 1 210 GLN 210 227 227 GLN GLN A . n A 1 211 PHE 211 228 228 PHE PHE A . n A 1 212 GLU 212 229 229 GLU GLU A . n A 1 213 GLY 213 230 230 GLY GLY A . n A 1 214 TYR 214 231 231 TYR TYR A . n A 1 215 ALA 215 232 232 ALA ALA A . n A 1 216 SER 216 233 233 SER SER A . n A 1 217 LEU 217 234 234 LEU LEU A . n A 1 218 ASP 218 235 235 ASP ASP A . n A 1 219 VAL 219 236 236 VAL VAL A . n A 1 220 LYS 220 237 237 LYS LYS A . n A 1 221 TYR 221 238 238 TYR TYR A . n A 1 222 PRO 222 239 239 PRO PRO A . n A 1 223 PRO 223 240 240 PRO PRO A . n A 1 224 VAL 224 241 241 VAL VAL A . n A 1 225 ILE 225 242 242 ILE ILE A . n A 1 226 VAL 226 243 243 VAL VAL A . n A 1 227 GLU 227 244 244 GLU GLU A . n A 1 228 MET 228 245 245 MET MET A . n A 1 229 ASN 229 246 246 ASN ASN A . n A 1 230 SER 230 247 247 SER SER A . n A 1 231 SER 231 248 248 SER SER A . n A 1 232 VAL 232 249 249 VAL VAL A . n A 1 233 GLU 233 250 250 GLU GLU A . n A 1 234 ALA 234 251 251 ALA ALA A . n A 1 235 ILE 235 252 252 ILE ILE A . n A 1 236 GLU 236 253 253 GLU GLU A . n A 1 237 GLY 237 254 254 GLY GLY A . n A 1 238 SER 238 255 255 SER SER A . n A 1 239 HIS 239 256 256 HIS HIS A . n A 1 240 VAL 240 257 257 VAL VAL A . n A 1 241 SER 241 258 258 SER SER A . n A 1 242 LEU 242 259 259 LEU LEU A . n A 1 243 LEU 243 260 260 LEU LEU A . n A 1 244 CYS 244 261 261 CYS CYS A . n A 1 245 GLY 245 262 262 GLY GLY A . n A 1 246 ALA 246 263 263 ALA ALA A . n A 1 247 ASP 247 264 264 ASP ASP A . n A 1 248 SER 248 265 265 SER SER A . n A 1 249 ASN 249 266 266 ASN ASN A . n A 1 250 PRO 250 267 267 PRO PRO A . n A 1 251 PRO 251 268 268 PRO PRO A . n A 1 252 PRO 252 269 269 PRO PRO A . n A 1 253 LEU 253 270 270 LEU LEU A . n A 1 254 LEU 254 271 271 LEU LEU A . n A 1 255 THR 255 272 272 THR THR A . n A 1 256 TRP 256 273 273 TRP TRP A . n A 1 257 MET 257 274 274 MET MET A . n A 1 258 ARG 258 275 275 ARG ARG A . n A 1 259 ASP 259 276 276 ASP ASP A . n A 1 260 GLY 260 277 277 GLY GLY A . n A 1 261 MET 261 278 278 MET MET A . n A 1 262 VAL 262 279 279 VAL VAL A . n A 1 263 LEU 263 280 280 LEU LEU A . n A 1 264 ARG 264 281 281 ARG ARG A . n A 1 265 GLU 265 282 282 GLU GLU A . n A 1 266 ALA 266 283 283 ALA ALA A . n A 1 267 VAL 267 284 284 VAL VAL A . n A 1 268 ALA 268 285 285 ALA ALA A . n A 1 269 LYS 269 286 286 LYS LYS A . n A 1 270 SER 270 287 287 SER SER A . n A 1 271 LEU 271 288 288 LEU LEU A . n A 1 272 TYR 272 289 289 TYR TYR A . n A 1 273 LEU 273 290 290 LEU LEU A . n A 1 274 ASP 274 291 291 ASP ASP A . n A 1 275 LEU 275 292 292 LEU LEU A . n A 1 276 GLU 276 293 293 GLU GLU A . n A 1 277 GLU 277 294 294 GLU GLU A . n A 1 278 VAL 278 295 295 VAL VAL A . n A 1 279 THR 279 296 296 THR THR A . n A 1 280 PRO 280 297 297 PRO PRO A . n A 1 281 GLY 281 298 298 GLY GLY A . n A 1 282 GLU 282 299 299 GLU GLU A . n A 1 283 ASP 283 300 300 ASP ASP A . n A 1 284 GLY 284 301 301 GLY GLY A . n A 1 285 VAL 285 302 302 VAL VAL A . n A 1 286 TYR 286 303 303 TYR TYR A . n A 1 287 ALA 287 304 304 ALA ALA A . n A 1 288 CYS 288 305 305 CYS CYS A . n A 1 289 LEU 289 306 306 LEU LEU A . n A 1 290 ALA 290 307 307 ALA ALA A . n A 1 291 GLU 291 308 308 GLU GLU A . n A 1 292 ASN 292 309 309 ASN ASN A . n A 1 293 ALA 293 310 310 ALA ALA A . n A 1 294 TYR 294 311 311 TYR TYR A . n A 1 295 GLY 295 312 312 GLY GLY A . n A 1 296 GLN 296 313 313 GLN GLN A . n A 1 297 ASP 297 314 314 ASP ASP A . n A 1 298 ASN 298 315 315 ASN ASN A . n A 1 299 ARG 299 316 316 ARG ARG A . n A 1 300 THR 300 317 317 THR THR A . n A 1 301 VAL 301 318 318 VAL VAL A . n A 1 302 GLU 302 319 319 GLU GLU A . n A 1 303 LEU 303 320 320 LEU LEU A . n A 1 304 SER 304 321 321 SER SER A . n A 1 305 VAL 305 322 322 VAL VAL A . n A 1 306 MET 306 323 323 MET MET A . n A 1 307 TYR 307 324 324 TYR TYR A . n A 1 308 ALA 308 325 325 ALA ALA A . n A 1 309 PRO 309 326 326 PRO PRO A . n A 1 310 TRP 310 327 327 TRP TRP A . n A 1 311 LYS 311 328 328 LYS LYS A . n A 1 312 PRO 312 329 329 PRO PRO A . n A 1 313 THR 313 330 330 THR THR A . n A 1 314 VAL 314 331 331 VAL VAL A . n A 1 315 ASN 315 332 332 ASN ASN A . n A 1 316 GLY 316 333 333 GLY GLY A . n A 1 317 THR 317 334 334 THR THR A . n A 1 318 VAL 318 335 335 VAL VAL A . n A 1 319 VAL 319 336 336 VAL VAL A . n A 1 320 ALA 320 337 337 ALA ALA A . n A 1 321 VAL 321 338 338 VAL VAL A . n A 1 322 GLU 322 339 339 GLU GLU A . n A 1 323 GLY 323 340 340 GLY GLY A . n A 1 324 GLU 324 341 341 GLU GLU A . n A 1 325 THR 325 342 342 THR THR A . n A 1 326 VAL 326 343 343 VAL VAL A . n A 1 327 SER 327 344 344 SER SER A . n A 1 328 ILE 328 345 345 ILE ILE A . n A 1 329 LEU 329 346 346 LEU LEU A . n A 1 330 CYS 330 347 347 CYS CYS A . n A 1 331 SER 331 348 348 SER SER A . n A 1 332 THR 332 349 349 THR THR A . n A 1 333 GLN 333 350 350 GLN GLN A . n A 1 334 SER 334 351 351 SER SER A . n A 1 335 ASN 335 352 352 ASN ASN A . n A 1 336 PRO 336 353 353 PRO PRO A . n A 1 337 ASP 337 354 354 ASP ASP A . n A 1 338 PRO 338 355 355 PRO PRO A . n A 1 339 ILE 339 356 356 ILE ILE A . n A 1 340 LEU 340 357 357 LEU LEU A . n A 1 341 THR 341 358 358 THR THR A . n A 1 342 ILE 342 359 359 ILE ILE A . n A 1 343 PHE 343 360 360 PHE PHE A . n A 1 344 LYS 344 361 361 LYS LYS A . n A 1 345 GLU 345 362 362 GLU GLU A . n A 1 346 LYS 346 363 363 LYS LYS A . n A 1 347 GLN 347 364 364 GLN GLN A . n A 1 348 ILE 348 365 365 ILE ILE A . n A 1 349 LEU 349 366 366 LEU LEU A . n A 1 350 ALA 350 367 367 ALA ALA A . n A 1 351 THR 351 368 368 THR THR A . n A 1 352 VAL 352 369 369 VAL VAL A . n A 1 353 ILE 353 370 370 ILE ILE A . n A 1 354 TYR 354 371 371 TYR TYR A . n A 1 355 GLU 355 372 372 GLU GLU A . n A 1 356 SER 356 373 373 SER SER A . n A 1 357 GLN 357 374 374 GLN GLN A . n A 1 358 LEU 358 375 375 LEU LEU A . n A 1 359 GLN 359 376 376 GLN GLN A . n A 1 360 LEU 360 377 377 LEU LEU A . n A 1 361 GLU 361 378 378 GLU GLU A . n A 1 362 LEU 362 379 379 LEU LEU A . n A 1 363 PRO 363 380 380 PRO PRO A . n A 1 364 ALA 364 381 381 ALA ALA A . n A 1 365 VAL 365 382 382 VAL VAL A . n A 1 366 THR 366 383 383 THR THR A . n A 1 367 PRO 367 384 384 PRO PRO A . n A 1 368 GLU 368 385 385 GLU GLU A . n A 1 369 ASP 369 386 386 ASP ASP A . n A 1 370 ASP 370 387 387 ASP ASP A . n A 1 371 GLY 371 388 388 GLY GLY A . n A 1 372 GLU 372 389 389 GLU GLU A . n A 1 373 TYR 373 390 390 TYR TYR A . n A 1 374 TRP 374 391 391 TRP TRP A . n A 1 375 CYS 375 392 392 CYS CYS A . n A 1 376 VAL 376 393 393 VAL VAL A . n A 1 377 ALA 377 394 394 ALA ALA A . n A 1 378 GLU 378 395 395 GLU GLU A . n A 1 379 ASN 379 396 396 ASN ASN A . n A 1 380 GLN 380 397 397 GLN GLN A . n A 1 381 TYR 381 398 398 TYR TYR A . n A 1 382 GLY 382 399 399 GLY GLY A . n A 1 383 GLN 383 400 400 GLN GLN A . n A 1 384 ARG 384 401 401 ARG ARG A . n A 1 385 ALA 385 402 402 ALA ALA A . n A 1 386 THR 386 403 403 THR THR A . n A 1 387 ALA 387 404 404 ALA ALA A . n A 1 388 PHE 388 405 405 PHE PHE A . n A 1 389 ASN 389 406 406 ASN ASN A . n A 1 390 LEU 390 407 407 LEU LEU A . n A 1 391 SER 391 408 408 SER SER A . n A 1 392 VAL 392 409 409 VAL VAL A . n A 1 393 GLU 393 410 410 GLU GLU A . n A 1 394 PHE 394 411 411 PHE PHE A . n A 1 395 ALA 395 412 412 ALA ALA A . n A 1 396 PRO 396 413 413 PRO PRO A . n A 1 397 ILE 397 414 414 ILE ILE A . n A 1 398 ILE 398 415 415 ILE ILE A . n A 1 399 LEU 399 416 416 LEU LEU A . n A 1 400 LEU 400 417 417 LEU LEU A . n A 1 401 GLU 401 418 418 GLU GLU A . n A 1 402 SER 402 419 419 SER SER A . n A 1 403 HIS 403 420 420 HIS HIS A . n A 1 404 CYS 404 421 421 CYS CYS A . n A 1 405 ALA 405 422 422 ALA ALA A . n A 1 406 ALA 406 423 423 ALA ALA A . n A 1 407 ALA 407 424 424 ALA ALA A . n A 1 408 ARG 408 425 425 ARG ARG A . n A 1 409 ASP 409 426 426 ASP ASP A . n A 1 410 THR 410 427 427 THR THR A . n A 1 411 VAL 411 428 428 VAL VAL A . n A 1 412 GLN 412 429 429 GLN GLN A . n A 1 413 CYS 413 430 430 CYS CYS A . n A 1 414 LEU 414 431 431 LEU LEU A . n A 1 415 CYS 415 432 432 CYS CYS A . n A 1 416 VAL 416 433 433 VAL VAL A . n A 1 417 VAL 417 434 434 VAL VAL A . n A 1 418 LYS 418 435 435 LYS LYS A . n A 1 419 SER 419 436 436 SER SER A . n A 1 420 ASN 420 437 437 ASN ASN A . n A 1 421 PRO 421 438 438 PRO PRO A . n A 1 422 GLU 422 439 439 GLU GLU A . n A 1 423 PRO 423 440 440 PRO PRO A . n A 1 424 SER 424 441 441 SER SER A . n A 1 425 VAL 425 442 442 VAL VAL A . n A 1 426 ALA 426 443 443 ALA ALA A . n A 1 427 PHE 427 444 444 PHE PHE A . n A 1 428 GLU 428 445 445 GLU GLU A . n A 1 429 LEU 429 446 446 LEU LEU A . n A 1 430 PRO 430 447 447 PRO PRO A . n A 1 431 SER 431 448 448 SER SER A . n A 1 432 ARG 432 449 ? ? ? A . n A 1 433 ASN 433 450 ? ? ? A . n A 1 434 VAL 434 451 ? ? ? A . n A 1 435 THR 435 452 452 THR THR A . n A 1 436 VAL 436 453 453 VAL VAL A . n A 1 437 ASN 437 454 454 ASN ASN A . n A 1 438 GLU 438 455 455 GLU GLU A . n A 1 439 THR 439 456 456 THR THR A . n A 1 440 GLU 440 457 457 GLU GLU A . n A 1 441 ARG 441 458 458 ARG ARG A . n A 1 442 GLU 442 459 459 GLU GLU A . n A 1 443 PHE 443 460 460 PHE PHE A . n A 1 444 VAL 444 461 461 VAL VAL A . n A 1 445 TYR 445 462 462 TYR TYR A . n A 1 446 SER 446 463 463 SER SER A . n A 1 447 GLU 447 464 464 GLU GLU A . n A 1 448 ARG 448 465 465 ARG ARG A . n A 1 449 SER 449 466 466 SER SER A . n A 1 450 GLY 450 467 467 GLY GLY A . n A 1 451 LEU 451 468 468 LEU LEU A . n A 1 452 LEU 452 469 469 LEU LEU A . n A 1 453 LEU 453 470 470 LEU LEU A . n A 1 454 THR 454 471 471 THR THR A . n A 1 455 SER 455 472 472 SER SER A . n A 1 456 ILE 456 473 473 ILE ILE A . n A 1 457 LEU 457 474 474 LEU LEU A . n A 1 458 THR 458 475 475 THR THR A . n A 1 459 ILE 459 476 476 ILE ILE A . n A 1 460 ARG 460 477 477 ARG ARG A . n A 1 461 GLY 461 478 478 GLY GLY A . n A 1 462 GLN 462 479 479 GLN GLN A . n A 1 463 ALA 463 480 480 ALA ALA A . n A 1 464 GLN 464 481 481 GLN GLN A . n A 1 465 ALA 465 482 482 ALA ALA A . n A 1 466 PRO 466 483 483 PRO PRO A . n A 1 467 PRO 467 484 484 PRO PRO A . n A 1 468 ARG 468 485 485 ARG ARG A . n A 1 469 VAL 469 486 486 VAL VAL A . n A 1 470 ILE 470 487 487 ILE ILE A . n A 1 471 CYS 471 488 488 CYS CYS A . n A 1 472 THR 472 489 489 THR THR A . n A 1 473 SER 473 490 490 SER SER A . n A 1 474 ARG 474 491 491 ARG ARG A . n A 1 475 ASN 475 492 492 ASN ASN A . n A 1 476 LEU 476 493 493 LEU LEU A . n A 1 477 TYR 477 494 494 TYR TYR A . n A 1 478 GLY 478 495 495 GLY GLY A . n A 1 479 THR 479 496 496 THR THR A . n A 1 480 GLN 480 497 497 GLN GLN A . n A 1 481 SER 481 498 498 SER SER A . n A 1 482 LEU 482 499 499 LEU LEU A . n A 1 483 GLU 483 500 500 GLU GLU A . n A 1 484 LEU 484 501 501 LEU LEU A . n A 1 485 PRO 485 502 502 PRO PRO A . n A 1 486 PHE 486 503 503 PHE PHE A . n A 1 487 GLN 487 504 504 GLN GLN A . n A 1 488 GLY 488 505 505 GLY GLY A . n A 1 489 ALA 489 506 506 ALA ALA A . n A 1 490 HIS 490 507 ? ? ? A . n A 1 491 ARG 491 508 ? ? ? A . n A 1 492 ALA 492 509 ? ? ? A . n A 1 493 ALA 493 510 ? ? ? A . n A 1 494 ALA 494 511 ? ? ? A . n A 1 495 HIS 495 512 ? ? ? A . n A 1 496 HIS 496 513 ? ? ? A . n A 1 497 HIS 497 514 ? ? ? A . n A 1 498 HIS 498 515 ? ? ? A . n A 1 499 HIS 499 516 ? ? ? A . n A 1 500 HIS 500 517 ? ? ? A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 1332 n B 2 FUC 2 B FUC 2 A FUC 2332 n C 3 NGA 1 C NGA 1 B NGA 2 n C 3 GAL 2 C GAL 2 B GAL 3 n C 3 SIA 3 C SIA 3 B SIA 4 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MAN 1 601 1022 MAN MAN A . E 5 NAG 1 602 1099 NAG NAG A . F 5 NAG 1 603 1246 NAG NAG A . G 5 NAG 1 604 1315 NAG NAG A . H 5 NAG 1 607 1406 NAG NAG A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.entry_id 5LF5 _cell.length_a 278.868 _cell.length_b 278.868 _cell.length_c 62.520 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LF5 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5LF5 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 12.7 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 90.33 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM NaCl, 20 mM Tris/HCl pH 7.0, 7.7 % PEG 4000 (w/v)' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-08-22 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.99998 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.99998 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5LF5 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.8 _reflns.d_resolution_low 52.70 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 27623 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.6 _reflns.pdbx_Rmerge_I_obs 0.233 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.997 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.8 _reflns_shell.d_res_low 4.03 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.6 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.685 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 9.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.565 _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5LF5 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 27582 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 52.701 _refine.ls_d_res_high 3.800 _refine.ls_percent_reflns_obs 99.89 _refine.ls_R_factor_obs 0.2005 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1990 _refine.ls_R_factor_R_free 0.2281 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.10 _refine.ls_number_reflns_R_free 1407 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model '1URL, 4FRW, 1CS6, 3P3Y, 2YD6' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details 'Random selection' _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.51 _refine.pdbx_overall_phase_error 25.30 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3750 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 137 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3887 _refine_hist.d_res_high 3.800 _refine_hist.d_res_low 52.701 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.006 ? ? 3998 'X-RAY DIFFRACTION' ? f_angle_d 1.397 ? ? 5474 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 14.034 ? ? 1453 'X-RAY DIFFRACTION' ? f_chiral_restr 0.192 ? ? 644 'X-RAY DIFFRACTION' ? f_plane_restr 0.013 ? ? 703 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 3.8001 3.9359 2588 0.4250 99.00 0.4192 . . 136 . . 'X-RAY DIFFRACTION' . 3.9359 4.0934 2599 0.2888 100.00 0.3051 . . 144 . . 'X-RAY DIFFRACTION' . 4.0934 4.2796 2581 0.2288 100.00 0.2675 . . 135 . . 'X-RAY DIFFRACTION' . 4.2796 4.5051 2632 0.1913 100.00 0.2099 . . 134 . . 'X-RAY DIFFRACTION' . 4.5051 4.7872 2597 0.1713 100.00 0.2068 . . 153 . . 'X-RAY DIFFRACTION' . 4.7872 5.1565 2587 0.1679 100.00 0.1856 . . 148 . . 'X-RAY DIFFRACTION' . 5.1565 5.6749 2628 0.1641 100.00 0.1996 . . 152 . . 'X-RAY DIFFRACTION' . 5.6749 6.4948 2612 0.1920 100.00 0.2576 . . 126 . . 'X-RAY DIFFRACTION' . 6.4948 8.1779 2643 0.1874 100.00 0.2089 . . 139 . . 'X-RAY DIFFRACTION' . 8.1779 52.7061 2708 0.1726 100.00 0.2024 . . 140 . . # _struct.entry_id 5LF5 _struct.title 'Myelin-associated glycoprotein (MAG) deglycosylated full extracellular domain with co-purified ligand' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5LF5 _struct_keywords.text 'Myelin, Cell Adhesion, Signaling' _struct_keywords.pdbx_keywords 'CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MAG_MOUSE _struct_ref.pdbx_db_accession P20917 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GHWGAWMPSTISAFEGTCVSIPCRFDFPDELRPAVVHGVWYFNSPYPKNYPPVVFKSRTQVVHESFQGRSRLLGDLGLRN CTLLLSTLSPELGGKYYFRGDLGGYNQYTFSEHSVLDIVNTPNIVVPPEVVAGTEVEVSCMVPDNCPELRPELSWLGHEG LGEPTVLGRLREDEGTWVQVSLLHFVPTREANGHRLGCQAAFPNTTLQFEGYASLDVKYPPVIVEMNSSVEAIEGSHVSL LCGADSNPPPLLTWMRDGMVLREAVAKSLYLDLEEVTPGEDGVYACLAENAYGQDNRTVELSVMYAPWKPTVNGTVVAVE GETVSILCSTQSNPDPILTIFKEKQILATVIYESQLQLELPAVTPEDDGEYWCVAENQYGQRATAFNLSVEFAPIILLES HCAAARDTVQCLCVVKSNPEPSVAFELPSRNVTVNETEREFVYSERSGLLLTSILTIRGQAQAPPRVICTSRNLYGTQSL ELPFQGAHR ; _struct_ref.pdbx_align_begin 20 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5LF5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 491 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P20917 _struct_ref_seq.db_align_beg 20 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 508 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 20 _struct_ref_seq.pdbx_auth_seq_align_end 508 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5LF5 GLY A 1 ? UNP P20917 ? ? 'expression tag' 18 1 1 5LF5 SER A 2 ? UNP P20917 ? ? 'expression tag' 19 2 1 5LF5 ALA A 492 ? UNP P20917 ? ? 'expression tag' 509 3 1 5LF5 ALA A 493 ? UNP P20917 ? ? 'expression tag' 510 4 1 5LF5 ALA A 494 ? UNP P20917 ? ? 'expression tag' 511 5 1 5LF5 HIS A 495 ? UNP P20917 ? ? 'expression tag' 512 6 1 5LF5 HIS A 496 ? UNP P20917 ? ? 'expression tag' 513 7 1 5LF5 HIS A 497 ? UNP P20917 ? ? 'expression tag' 514 8 1 5LF5 HIS A 498 ? UNP P20917 ? ? 'expression tag' 515 9 1 5LF5 HIS A 499 ? UNP P20917 ? ? 'expression tag' 516 10 1 5LF5 HIS A 500 ? UNP P20917 ? ? 'expression tag' 517 11 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9360 ? 1 MORE 31 ? 1 'SSA (A^2)' 53000 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_676 x-y+1,-y+2,-z+4/3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 483.0135446051 0.0000000000 0.0000000000 -1.0000000000 83.3600000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 77 ? ARG A 81 ? ASP A 94 ARG A 98 5 ? 5 HELX_P HELX_P2 AA2 SER A 91 ? GLY A 95 ? SER A 108 GLY A 112 5 ? 5 HELX_P HELX_P3 AA3 THR A 190 ? ASN A 194 ? THR A 207 ASN A 211 5 ? 5 HELX_P HELX_P4 AA4 THR A 366 ? ASP A 370 ? THR A 383 ASP A 387 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 20 SG ? ? ? 1_555 A CYS 148 SG ? ? A CYS 37 A CYS 165 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? A CYS 25 SG ? ? ? 1_555 A CYS 83 SG ? ? A CYS 42 A CYS 100 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf3 disulf ? ? A CYS 142 SG ? ? ? 1_555 A CYS 200 SG ? ? A CYS 159 A CYS 217 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf4 disulf ? ? A CYS 244 SG ? ? ? 1_555 A CYS 288 SG ? ? A CYS 261 A CYS 305 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf5 disulf ? ? A CYS 330 SG ? ? ? 1_555 A CYS 375 SG ? ? A CYS 347 A CYS 392 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf6 disulf ? ? A CYS 404 SG ? ? ? 1_555 A CYS 413 SG ? ? A CYS 421 A CYS 430 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf7 disulf ? ? A CYS 415 SG ? ? ? 1_555 A CYS 471 SG ? ? A CYS 432 A CYS 488 1_555 ? ? ? ? ? ? ? 2.031 ? ? covale1 covale one ? A TRP 5 CD1 ? ? ? 1_555 D MAN . C1 ? ? A TRP 22 A MAN 601 1_555 ? ? ? ? ? ? ? 1.478 ? C-Mannosylation covale2 covale one ? A ASN 82 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 99 A NAG 602 1_555 ? ? ? ? ? ? ? 1.436 ? N-Glycosylation covale3 covale one ? A ASN 229 ND2 ? ? ? 1_555 F NAG . C1 ? ? A ASN 246 A NAG 603 1_555 ? ? ? ? ? ? ? 1.430 ? N-Glycosylation covale4 covale one ? A ASN 298 ND2 ? ? ? 1_555 G NAG . C1 ? ? A ASN 315 A NAG 604 1_555 ? ? ? ? ? ? ? 1.429 ? N-Glycosylation covale5 covale one ? A ASN 315 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 332 B NAG 1 1_555 ? ? ? ? ? ? ? 1.554 ? N-Glycosylation covale6 covale one ? A ASN 389 ND2 ? ? ? 1_555 H NAG . C1 ? ? A ASN 406 A NAG 607 1_555 ? ? ? ? ? ? ? 1.442 ? N-Glycosylation covale7 covale both ? B NAG . O6 ? ? ? 1_555 B FUC . C1 ? ? B NAG 1 B FUC 2 1_555 ? ? ? ? ? ? ? 1.429 ? ? covale8 covale both ? C NGA . O3 ? ? ? 1_555 C GAL . C1 ? ? C NGA 1 C GAL 2 1_555 ? ? ? ? ? ? ? 1.446 ? ? covale9 covale both ? C GAL . O3 ? ? ? 1_555 C SIA . C2 ? ? C GAL 2 C SIA 3 1_555 ? ? ? ? ? ? ? 1.466 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id THR _struct_mon_prot_cis.label_seq_id 439 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id THR _struct_mon_prot_cis.auth_seq_id 456 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 GLU _struct_mon_prot_cis.pdbx_label_seq_id_2 440 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 GLU _struct_mon_prot_cis.pdbx_auth_seq_id_2 457 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.10 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 5 ? AA3 ? 4 ? AA4 ? 3 ? AA5 ? 4 ? AA6 ? 2 ? AA7 ? 3 ? AA8 ? 3 ? AA9 ? 5 ? AB1 ? 3 ? AB2 ? 5 ? AB3 ? 3 ? AB4 ? 4 ? AB5 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA9 1 2 ? parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel AA9 4 5 ? anti-parallel AB1 1 2 ? anti-parallel AB1 2 3 ? anti-parallel AB2 1 2 ? parallel AB2 2 3 ? anti-parallel AB2 3 4 ? anti-parallel AB2 4 5 ? anti-parallel AB3 1 2 ? anti-parallel AB3 2 3 ? anti-parallel AB4 1 2 ? anti-parallel AB4 2 3 ? anti-parallel AB4 3 4 ? anti-parallel AB5 1 2 ? anti-parallel AB5 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY A 6 ? TRP A 8 ? GLY A 23 TRP A 25 AA1 2 ARG A 26 ? ASP A 28 ? ARG A 43 ASP A 45 AA2 1 THR A 12 ? PHE A 16 ? THR A 29 PHE A 33 AA2 2 SER A 116 ? VAL A 121 ? SER A 133 VAL A 138 AA2 3 GLY A 96 ? ASP A 103 ? GLY A 113 ASP A 120 AA2 4 HIS A 39 ? PHE A 44 ? HIS A 56 PHE A 61 AA2 5 VAL A 55 ? LYS A 58 ? VAL A 72 LYS A 75 AA3 1 THR A 12 ? PHE A 16 ? THR A 29 PHE A 33 AA3 2 SER A 116 ? VAL A 121 ? SER A 133 VAL A 138 AA3 3 GLY A 96 ? ASP A 103 ? GLY A 113 ASP A 120 AA3 4 GLN A 109 ? THR A 111 ? GLN A 126 THR A 128 AA4 1 VAL A 21 ? ILE A 23 ? VAL A 38 ILE A 40 AA4 2 LEU A 85 ? LEU A 87 ? LEU A 102 LEU A 104 AA4 3 SER A 72 ? LEU A 74 ? SER A 89 LEU A 91 AA5 1 ASN A 125 ? VAL A 127 ? ASN A 142 VAL A 144 AA5 2 VAL A 138 ? PRO A 145 ? VAL A 155 PRO A 162 AA5 3 THR A 178 ? PHE A 187 ? THR A 195 PHE A 204 AA5 4 PRO A 166 ? GLU A 174 ? PRO A 183 GLU A 191 AA6 1 VAL A 132 ? VAL A 133 ? VAL A 149 VAL A 150 AA6 2 VAL A 219 ? LYS A 220 ? VAL A 236 LYS A 237 AA7 1 GLU A 154 ? LEU A 158 ? GLU A 171 LEU A 175 AA7 2 ARG A 197 ? ALA A 203 ? ARG A 214 ALA A 220 AA7 3 GLN A 210 ? SER A 216 ? GLN A 227 SER A 233 AA8 1 VAL A 224 ? MET A 228 ? VAL A 241 MET A 245 AA8 2 HIS A 239 ? ASP A 247 ? HIS A 256 ASP A 264 AA8 3 SER A 270 ? GLU A 276 ? SER A 287 GLU A 293 AA9 1 VAL A 232 ? ILE A 235 ? VAL A 249 ILE A 252 AA9 2 GLY A 295 ? MET A 306 ? GLY A 312 MET A 323 AA9 3 GLY A 284 ? ASN A 292 ? GLY A 301 ASN A 309 AA9 4 LEU A 253 ? MET A 257 ? LEU A 270 MET A 274 AA9 5 GLU A 265 ? ALA A 266 ? GLU A 282 ALA A 283 AB1 1 THR A 313 ? GLY A 316 ? THR A 330 GLY A 333 AB1 2 VAL A 326 ? SER A 331 ? VAL A 343 SER A 348 AB1 3 GLN A 357 ? LEU A 362 ? GLN A 374 LEU A 379 AB2 1 VAL A 319 ? VAL A 321 ? VAL A 336 VAL A 338 AB2 2 ARG A 384 ? GLU A 393 ? ARG A 401 GLU A 410 AB2 3 GLY A 371 ? ALA A 377 ? GLY A 388 ALA A 394 AB2 4 LEU A 340 ? LYS A 344 ? LEU A 357 LYS A 361 AB2 5 GLN A 347 ? VAL A 352 ? GLN A 364 VAL A 369 AB3 1 ILE A 397 ? ILE A 398 ? ILE A 414 ILE A 415 AB3 2 VAL A 411 ? LYS A 418 ? VAL A 428 LYS A 435 AB3 3 HIS A 403 ? ALA A 406 ? HIS A 420 ALA A 423 AB4 1 ILE A 397 ? ILE A 398 ? ILE A 414 ILE A 415 AB4 2 VAL A 411 ? LYS A 418 ? VAL A 428 LYS A 435 AB4 3 LEU A 452 ? ILE A 459 ? LEU A 469 ILE A 476 AB4 4 PHE A 443 ? SER A 449 ? PHE A 460 SER A 466 AB5 1 SER A 424 ? GLU A 428 ? SER A 441 GLU A 445 AB5 2 ILE A 470 ? ARG A 474 ? ILE A 487 ARG A 491 AB5 3 THR A 479 ? GLU A 483 ? THR A 496 GLU A 500 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TRP A 8 ? N TRP A 25 O ARG A 26 ? O ARG A 43 AA2 1 2 N ILE A 13 ? N ILE A 30 O ASP A 119 ? O ASP A 136 AA2 2 3 O LEU A 118 ? O LEU A 135 N GLY A 96 ? N GLY A 113 AA2 3 4 O ASP A 103 ? O ASP A 120 N HIS A 39 ? N HIS A 56 AA2 4 5 N TRP A 42 ? N TRP A 59 O PHE A 57 ? O PHE A 74 AA3 1 2 N ILE A 13 ? N ILE A 30 O ASP A 119 ? O ASP A 136 AA3 2 3 O LEU A 118 ? O LEU A 135 N GLY A 96 ? N GLY A 113 AA3 3 4 N GLY A 102 ? N GLY A 119 O TYR A 110 ? O TYR A 127 AA4 1 2 N ILE A 23 ? N ILE A 40 O LEU A 85 ? O LEU A 102 AA4 2 3 O LEU A 86 ? O LEU A 103 N ARG A 73 ? N ARG A 90 AA5 1 2 N ASN A 125 ? N ASN A 142 O MET A 143 ? O MET A 160 AA5 2 3 N VAL A 144 ? N VAL A 161 O GLN A 181 ? O GLN A 198 AA5 3 4 O THR A 178 ? O THR A 195 N GLU A 174 ? N GLU A 191 AA6 1 2 N VAL A 132 ? N VAL A 149 O LYS A 220 ? O LYS A 237 AA7 1 2 N SER A 156 ? N SER A 173 O GLN A 201 ? O GLN A 218 AA7 2 3 N LEU A 198 ? N LEU A 215 O ALA A 215 ? O ALA A 232 AA8 1 2 N GLU A 227 ? N GLU A 244 O GLY A 245 ? O GLY A 262 AA8 2 3 N VAL A 240 ? N VAL A 257 O LEU A 275 ? O LEU A 292 AA9 1 2 N ALA A 234 ? N ALA A 251 O MET A 306 ? O MET A 323 AA9 2 3 O GLY A 295 ? O GLY A 312 N ASN A 292 ? N ASN A 309 AA9 3 4 O ALA A 287 ? O ALA A 304 N MET A 257 ? N MET A 274 AA9 4 5 N LEU A 254 ? N LEU A 271 O ALA A 266 ? O ALA A 283 AB1 1 2 N THR A 313 ? N THR A 330 O SER A 331 ? O SER A 348 AB1 2 3 N ILE A 328 ? N ILE A 345 O LEU A 360 ? O LEU A 377 AB2 1 2 N ALA A 320 ? N ALA A 337 O SER A 391 ? O SER A 408 AB2 2 3 O ARG A 384 ? O ARG A 401 N ALA A 377 ? N ALA A 394 AB2 3 4 O VAL A 376 ? O VAL A 393 N THR A 341 ? N THR A 358 AB2 4 5 N LEU A 340 ? N LEU A 357 O VAL A 352 ? O VAL A 369 AB3 1 2 N ILE A 397 ? N ILE A 414 O LYS A 418 ? O LYS A 435 AB3 2 3 O LEU A 414 ? O LEU A 431 N HIS A 403 ? N HIS A 420 AB4 1 2 N ILE A 397 ? N ILE A 414 O LYS A 418 ? O LYS A 435 AB4 2 3 N CYS A 413 ? N CYS A 430 O LEU A 457 ? O LEU A 474 AB4 3 4 O ILE A 456 ? O ILE A 473 N TYR A 445 ? N TYR A 462 AB5 1 2 N GLU A 428 ? N GLU A 445 O ILE A 470 ? O ILE A 487 AB5 2 3 N SER A 473 ? N SER A 490 O GLN A 480 ? O GLN A 497 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O3 C GAL 2 ? ? O6 C SIA 3 ? ? 1.97 2 1 OE1 A GLU 410 ? ? OH A TYR 494 ? ? 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A ASN 266 ? ? N A PRO 267 ? ? CA A PRO 267 ? ? 109.42 119.30 -9.88 1.50 Y 2 1 C A PRO 268 ? ? N A PRO 269 ? ? CA A PRO 269 ? ? 108.01 119.30 -11.29 1.50 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 43 ? ? -172.33 142.57 2 1 VAL A 54 ? ? 37.28 62.60 3 1 ASN A 62 ? ? 65.96 -62.82 4 1 TYR A 124 ? ? 70.90 -12.58 5 1 ASN A 125 ? ? -90.95 58.55 6 1 PRO A 162 ? ? -62.27 99.84 7 1 GLU A 178 ? ? 50.60 -114.33 8 1 ASP A 192 ? ? 52.29 -119.88 9 1 LEU A 280 ? ? 56.58 -120.69 10 1 PHE A 360 ? ? -172.28 140.50 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C1 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id B _pdbx_validate_chiral.auth_comp_id NAG _pdbx_validate_chiral.auth_seq_id 1 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 72.6668 131.7701 16.8174 0.6117 0.8528 1.0315 0.2995 -0.0492 0.0254 3.0707 5.6240 7.6483 2.8206 -0.0096 -0.1956 0.1533 0.3321 -0.2428 -0.2551 -0.1452 -0.0764 0.1020 0.6495 0.0387 'X-RAY DIFFRACTION' 2 ? refined 46.0950 151.0999 13.5661 1.6188 1.2655 1.7507 0.6964 -0.1611 -0.1534 7.0678 6.6158 1.3226 -6.4501 1.0739 0.6232 -0.2173 0.0571 0.3476 -0.3686 -0.0933 0.9175 -1.0455 -0.9221 0.2237 'X-RAY DIFFRACTION' 3 ? refined 37.2755 192.7792 20.7303 2.2549 1.1201 2.2498 0.7287 0.0107 0.0502 7.7350 5.1713 2.1982 -3.4710 -4.3071 7.0568 0.5513 0.1822 -0.0957 -0.6329 -0.5511 0.2605 -0.4804 0.0981 0.0127 'X-RAY DIFFRACTION' 4 ? refined 15.0655 226.7843 27.6531 1.4787 0.6951 1.2284 0.2054 0.2826 -0.1127 9.0603 7.7618 4.2039 1.6493 2.7429 -3.9637 -0.0739 0.1602 -0.4965 -1.4082 0.1647 -0.4576 1.2517 1.1894 -0.0609 'X-RAY DIFFRACTION' 5 ? refined 6.7747 263.6319 39.6996 1.5225 0.5910 1.3581 0.0404 0.0117 -0.0137 7.3045 7.3137 6.2890 1.1425 0.3953 -2.5672 0.1201 -0.6036 1.4817 -0.4675 -0.1667 -0.1823 -1.8414 0.0250 -0.0419 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 20 through 138 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 139 through 238 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 239 through 323 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 324 through 409 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 410 through 506 ) ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 18 ? A GLY 1 2 1 Y 1 A SER 19 ? A SER 2 3 1 Y 1 A ARG 449 ? A ARG 432 4 1 Y 1 A ASN 450 ? A ASN 433 5 1 Y 1 A VAL 451 ? A VAL 434 6 1 Y 1 A HIS 507 ? A HIS 490 7 1 Y 1 A ARG 508 ? A ARG 491 8 1 Y 1 A ALA 509 ? A ALA 492 9 1 Y 1 A ALA 510 ? A ALA 493 10 1 Y 1 A ALA 511 ? A ALA 494 11 1 Y 1 A HIS 512 ? A HIS 495 12 1 Y 1 A HIS 513 ? A HIS 496 13 1 Y 1 A HIS 514 ? A HIS 497 14 1 Y 1 A HIS 515 ? A HIS 498 15 1 Y 1 A HIS 516 ? A HIS 499 16 1 Y 1 A HIS 517 ? A HIS 500 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FUC C1 C N R 88 FUC C2 C N S 89 FUC C3 C N R 90 FUC C4 C N S 91 FUC C5 C N S 92 FUC C6 C N N 93 FUC O1 O N N 94 FUC O2 O N N 95 FUC O3 O N N 96 FUC O4 O N N 97 FUC O5 O N N 98 FUC H1 H N N 99 FUC H2 H N N 100 FUC H3 H N N 101 FUC H4 H N N 102 FUC H5 H N N 103 FUC H61 H N N 104 FUC H62 H N N 105 FUC H63 H N N 106 FUC HO1 H N N 107 FUC HO2 H N N 108 FUC HO3 H N N 109 FUC HO4 H N N 110 GAL C1 C N R 111 GAL C2 C N R 112 GAL C3 C N S 113 GAL C4 C N R 114 GAL C5 C N R 115 GAL C6 C N N 116 GAL O1 O N N 117 GAL O2 O N N 118 GAL O3 O N N 119 GAL O4 O N N 120 GAL O5 O N N 121 GAL O6 O N N 122 GAL H1 H N N 123 GAL H2 H N N 124 GAL H3 H N N 125 GAL H4 H N N 126 GAL H5 H N N 127 GAL H61 H N N 128 GAL H62 H N N 129 GAL HO1 H N N 130 GAL HO2 H N N 131 GAL HO3 H N N 132 GAL HO4 H N N 133 GAL HO6 H N N 134 GLN N N N N 135 GLN CA C N S 136 GLN C C N N 137 GLN O O N N 138 GLN CB C N N 139 GLN CG C N N 140 GLN CD C N N 141 GLN OE1 O N N 142 GLN NE2 N N N 143 GLN OXT O N N 144 GLN H H N N 145 GLN H2 H N N 146 GLN HA H N N 147 GLN HB2 H N N 148 GLN HB3 H N N 149 GLN HG2 H N N 150 GLN HG3 H N N 151 GLN HE21 H N N 152 GLN HE22 H N N 153 GLN HXT H N N 154 GLU N N N N 155 GLU CA C N S 156 GLU C C N N 157 GLU O O N N 158 GLU CB C N N 159 GLU CG C N N 160 GLU CD C N N 161 GLU OE1 O N N 162 GLU OE2 O N N 163 GLU OXT O N N 164 GLU H H N N 165 GLU H2 H N N 166 GLU HA H N N 167 GLU HB2 H N N 168 GLU HB3 H N N 169 GLU HG2 H N N 170 GLU HG3 H N N 171 GLU HE2 H N N 172 GLU HXT H N N 173 GLY N N N N 174 GLY CA C N N 175 GLY C C N N 176 GLY O O N N 177 GLY OXT O N N 178 GLY H H N N 179 GLY H2 H N N 180 GLY HA2 H N N 181 GLY HA3 H N N 182 GLY HXT H N N 183 HIS N N N N 184 HIS CA C N S 185 HIS C C N N 186 HIS O O N N 187 HIS CB C N N 188 HIS CG C Y N 189 HIS ND1 N Y N 190 HIS CD2 C Y N 191 HIS CE1 C Y N 192 HIS NE2 N Y N 193 HIS OXT O N N 194 HIS H H N N 195 HIS H2 H N N 196 HIS HA H N N 197 HIS HB2 H N N 198 HIS HB3 H N N 199 HIS HD1 H N N 200 HIS HD2 H N N 201 HIS HE1 H N N 202 HIS HE2 H N N 203 HIS HXT H N N 204 ILE N N N N 205 ILE CA C N S 206 ILE C C N N 207 ILE O O N N 208 ILE CB C N S 209 ILE CG1 C N N 210 ILE CG2 C N N 211 ILE CD1 C N N 212 ILE OXT O N N 213 ILE H H N N 214 ILE H2 H N N 215 ILE HA H N N 216 ILE HB H N N 217 ILE HG12 H N N 218 ILE HG13 H N N 219 ILE HG21 H N N 220 ILE HG22 H N N 221 ILE HG23 H N N 222 ILE HD11 H N N 223 ILE HD12 H N N 224 ILE HD13 H N N 225 ILE HXT H N N 226 LEU N N N N 227 LEU CA C N S 228 LEU C C N N 229 LEU O O N N 230 LEU CB C N N 231 LEU CG C N N 232 LEU CD1 C N N 233 LEU CD2 C N N 234 LEU OXT O N N 235 LEU H H N N 236 LEU H2 H N N 237 LEU HA H N N 238 LEU HB2 H N N 239 LEU HB3 H N N 240 LEU HG H N N 241 LEU HD11 H N N 242 LEU HD12 H N N 243 LEU HD13 H N N 244 LEU HD21 H N N 245 LEU HD22 H N N 246 LEU HD23 H N N 247 LEU HXT H N N 248 LYS N N N N 249 LYS CA C N S 250 LYS C C N N 251 LYS O O N N 252 LYS CB C N N 253 LYS CG C N N 254 LYS CD C N N 255 LYS CE C N N 256 LYS NZ N N N 257 LYS OXT O N N 258 LYS H H N N 259 LYS H2 H N N 260 LYS HA H N N 261 LYS HB2 H N N 262 LYS HB3 H N N 263 LYS HG2 H N N 264 LYS HG3 H N N 265 LYS HD2 H N N 266 LYS HD3 H N N 267 LYS HE2 H N N 268 LYS HE3 H N N 269 LYS HZ1 H N N 270 LYS HZ2 H N N 271 LYS HZ3 H N N 272 LYS HXT H N N 273 MAN C1 C N S 274 MAN C2 C N S 275 MAN C3 C N S 276 MAN C4 C N S 277 MAN C5 C N R 278 MAN C6 C N N 279 MAN O1 O N N 280 MAN O2 O N N 281 MAN O3 O N N 282 MAN O4 O N N 283 MAN O5 O N N 284 MAN O6 O N N 285 MAN H1 H N N 286 MAN H2 H N N 287 MAN H3 H N N 288 MAN H4 H N N 289 MAN H5 H N N 290 MAN H61 H N N 291 MAN H62 H N N 292 MAN HO1 H N N 293 MAN HO2 H N N 294 MAN HO3 H N N 295 MAN HO4 H N N 296 MAN HO6 H N N 297 MET N N N N 298 MET CA C N S 299 MET C C N N 300 MET O O N N 301 MET CB C N N 302 MET CG C N N 303 MET SD S N N 304 MET CE C N N 305 MET OXT O N N 306 MET H H N N 307 MET H2 H N N 308 MET HA H N N 309 MET HB2 H N N 310 MET HB3 H N N 311 MET HG2 H N N 312 MET HG3 H N N 313 MET HE1 H N N 314 MET HE2 H N N 315 MET HE3 H N N 316 MET HXT H N N 317 NAG C1 C N R 318 NAG C2 C N R 319 NAG C3 C N R 320 NAG C4 C N S 321 NAG C5 C N R 322 NAG C6 C N N 323 NAG C7 C N N 324 NAG C8 C N N 325 NAG N2 N N N 326 NAG O1 O N N 327 NAG O3 O N N 328 NAG O4 O N N 329 NAG O5 O N N 330 NAG O6 O N N 331 NAG O7 O N N 332 NAG H1 H N N 333 NAG H2 H N N 334 NAG H3 H N N 335 NAG H4 H N N 336 NAG H5 H N N 337 NAG H61 H N N 338 NAG H62 H N N 339 NAG H81 H N N 340 NAG H82 H N N 341 NAG H83 H N N 342 NAG HN2 H N N 343 NAG HO1 H N N 344 NAG HO3 H N N 345 NAG HO4 H N N 346 NAG HO6 H N N 347 NGA C1 C N R 348 NGA C2 C N R 349 NGA C3 C N R 350 NGA C4 C N R 351 NGA C5 C N R 352 NGA C6 C N N 353 NGA C7 C N N 354 NGA C8 C N N 355 NGA N2 N N N 356 NGA O1 O N N 357 NGA O3 O N N 358 NGA O4 O N N 359 NGA O5 O N N 360 NGA O6 O N N 361 NGA O7 O N N 362 NGA H1 H N N 363 NGA H2 H N N 364 NGA H3 H N N 365 NGA H4 H N N 366 NGA H5 H N N 367 NGA H61 H N N 368 NGA H62 H N N 369 NGA H81 H N N 370 NGA H82 H N N 371 NGA H83 H N N 372 NGA HN2 H N N 373 NGA HO1 H N N 374 NGA HO3 H N N 375 NGA HO4 H N N 376 NGA HO6 H N N 377 PHE N N N N 378 PHE CA C N S 379 PHE C C N N 380 PHE O O N N 381 PHE CB C N N 382 PHE CG C Y N 383 PHE CD1 C Y N 384 PHE CD2 C Y N 385 PHE CE1 C Y N 386 PHE CE2 C Y N 387 PHE CZ C Y N 388 PHE OXT O N N 389 PHE H H N N 390 PHE H2 H N N 391 PHE HA H N N 392 PHE HB2 H N N 393 PHE HB3 H N N 394 PHE HD1 H N N 395 PHE HD2 H N N 396 PHE HE1 H N N 397 PHE HE2 H N N 398 PHE HZ H N N 399 PHE HXT H N N 400 PRO N N N N 401 PRO CA C N S 402 PRO C C N N 403 PRO O O N N 404 PRO CB C N N 405 PRO CG C N N 406 PRO CD C N N 407 PRO OXT O N N 408 PRO H H N N 409 PRO HA H N N 410 PRO HB2 H N N 411 PRO HB3 H N N 412 PRO HG2 H N N 413 PRO HG3 H N N 414 PRO HD2 H N N 415 PRO HD3 H N N 416 PRO HXT H N N 417 SER N N N N 418 SER CA C N S 419 SER C C N N 420 SER O O N N 421 SER CB C N N 422 SER OG O N N 423 SER OXT O N N 424 SER H H N N 425 SER H2 H N N 426 SER HA H N N 427 SER HB2 H N N 428 SER HB3 H N N 429 SER HG H N N 430 SER HXT H N N 431 SIA C1 C N N 432 SIA C2 C N R 433 SIA C3 C N N 434 SIA C4 C N S 435 SIA C5 C N R 436 SIA C6 C N R 437 SIA C7 C N R 438 SIA C8 C N R 439 SIA C9 C N N 440 SIA C10 C N N 441 SIA C11 C N N 442 SIA N5 N N N 443 SIA O1A O N N 444 SIA O1B O N N 445 SIA O2 O N N 446 SIA O4 O N N 447 SIA O6 O N N 448 SIA O7 O N N 449 SIA O8 O N N 450 SIA O9 O N N 451 SIA O10 O N N 452 SIA H32 H N N 453 SIA H31 H N N 454 SIA H4 H N N 455 SIA H5 H N N 456 SIA H6 H N N 457 SIA H7 H N N 458 SIA H8 H N N 459 SIA H92 H N N 460 SIA H91 H N N 461 SIA H111 H N N 462 SIA H113 H N N 463 SIA H112 H N N 464 SIA HN5 H N N 465 SIA HO1B H N N 466 SIA HO2 H N N 467 SIA HO4 H N N 468 SIA HO7 H N N 469 SIA HO8 H N N 470 SIA HO9 H N N 471 THR N N N N 472 THR CA C N S 473 THR C C N N 474 THR O O N N 475 THR CB C N R 476 THR OG1 O N N 477 THR CG2 C N N 478 THR OXT O N N 479 THR H H N N 480 THR H2 H N N 481 THR HA H N N 482 THR HB H N N 483 THR HG1 H N N 484 THR HG21 H N N 485 THR HG22 H N N 486 THR HG23 H N N 487 THR HXT H N N 488 TRP N N N N 489 TRP CA C N S 490 TRP C C N N 491 TRP O O N N 492 TRP CB C N N 493 TRP CG C Y N 494 TRP CD1 C Y N 495 TRP CD2 C Y N 496 TRP NE1 N Y N 497 TRP CE2 C Y N 498 TRP CE3 C Y N 499 TRP CZ2 C Y N 500 TRP CZ3 C Y N 501 TRP CH2 C Y N 502 TRP OXT O N N 503 TRP H H N N 504 TRP H2 H N N 505 TRP HA H N N 506 TRP HB2 H N N 507 TRP HB3 H N N 508 TRP HD1 H N N 509 TRP HE1 H N N 510 TRP HE3 H N N 511 TRP HZ2 H N N 512 TRP HZ3 H N N 513 TRP HH2 H N N 514 TRP HXT H N N 515 TYR N N N N 516 TYR CA C N S 517 TYR C C N N 518 TYR O O N N 519 TYR CB C N N 520 TYR CG C Y N 521 TYR CD1 C Y N 522 TYR CD2 C Y N 523 TYR CE1 C Y N 524 TYR CE2 C Y N 525 TYR CZ C Y N 526 TYR OH O N N 527 TYR OXT O N N 528 TYR H H N N 529 TYR H2 H N N 530 TYR HA H N N 531 TYR HB2 H N N 532 TYR HB3 H N N 533 TYR HD1 H N N 534 TYR HD2 H N N 535 TYR HE1 H N N 536 TYR HE2 H N N 537 TYR HH H N N 538 TYR HXT H N N 539 VAL N N N N 540 VAL CA C N S 541 VAL C C N N 542 VAL O O N N 543 VAL CB C N N 544 VAL CG1 C N N 545 VAL CG2 C N N 546 VAL OXT O N N 547 VAL H H N N 548 VAL H2 H N N 549 VAL HA H N N 550 VAL HB H N N 551 VAL HG11 H N N 552 VAL HG12 H N N 553 VAL HG13 H N N 554 VAL HG21 H N N 555 VAL HG22 H N N 556 VAL HG23 H N N 557 VAL HXT H N N 558 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FUC C1 C2 sing N N 83 FUC C1 O1 sing N N 84 FUC C1 O5 sing N N 85 FUC C1 H1 sing N N 86 FUC C2 C3 sing N N 87 FUC C2 O2 sing N N 88 FUC C2 H2 sing N N 89 FUC C3 C4 sing N N 90 FUC C3 O3 sing N N 91 FUC C3 H3 sing N N 92 FUC C4 C5 sing N N 93 FUC C4 O4 sing N N 94 FUC C4 H4 sing N N 95 FUC C5 C6 sing N N 96 FUC C5 O5 sing N N 97 FUC C5 H5 sing N N 98 FUC C6 H61 sing N N 99 FUC C6 H62 sing N N 100 FUC C6 H63 sing N N 101 FUC O1 HO1 sing N N 102 FUC O2 HO2 sing N N 103 FUC O3 HO3 sing N N 104 FUC O4 HO4 sing N N 105 GAL C1 C2 sing N N 106 GAL C1 O1 sing N N 107 GAL C1 O5 sing N N 108 GAL C1 H1 sing N N 109 GAL C2 C3 sing N N 110 GAL C2 O2 sing N N 111 GAL C2 H2 sing N N 112 GAL C3 C4 sing N N 113 GAL C3 O3 sing N N 114 GAL C3 H3 sing N N 115 GAL C4 C5 sing N N 116 GAL C4 O4 sing N N 117 GAL C4 H4 sing N N 118 GAL C5 C6 sing N N 119 GAL C5 O5 sing N N 120 GAL C5 H5 sing N N 121 GAL C6 O6 sing N N 122 GAL C6 H61 sing N N 123 GAL C6 H62 sing N N 124 GAL O1 HO1 sing N N 125 GAL O2 HO2 sing N N 126 GAL O3 HO3 sing N N 127 GAL O4 HO4 sing N N 128 GAL O6 HO6 sing N N 129 GLN N CA sing N N 130 GLN N H sing N N 131 GLN N H2 sing N N 132 GLN CA C sing N N 133 GLN CA CB sing N N 134 GLN CA HA sing N N 135 GLN C O doub N N 136 GLN C OXT sing N N 137 GLN CB CG sing N N 138 GLN CB HB2 sing N N 139 GLN CB HB3 sing N N 140 GLN CG CD sing N N 141 GLN CG HG2 sing N N 142 GLN CG HG3 sing N N 143 GLN CD OE1 doub N N 144 GLN CD NE2 sing N N 145 GLN NE2 HE21 sing N N 146 GLN NE2 HE22 sing N N 147 GLN OXT HXT sing N N 148 GLU N CA sing N N 149 GLU N H sing N N 150 GLU N H2 sing N N 151 GLU CA C sing N N 152 GLU CA CB sing N N 153 GLU CA HA sing N N 154 GLU C O doub N N 155 GLU C OXT sing N N 156 GLU CB CG sing N N 157 GLU CB HB2 sing N N 158 GLU CB HB3 sing N N 159 GLU CG CD sing N N 160 GLU CG HG2 sing N N 161 GLU CG HG3 sing N N 162 GLU CD OE1 doub N N 163 GLU CD OE2 sing N N 164 GLU OE2 HE2 sing N N 165 GLU OXT HXT sing N N 166 GLY N CA sing N N 167 GLY N H sing N N 168 GLY N H2 sing N N 169 GLY CA C sing N N 170 GLY CA HA2 sing N N 171 GLY CA HA3 sing N N 172 GLY C O doub N N 173 GLY C OXT sing N N 174 GLY OXT HXT sing N N 175 HIS N CA sing N N 176 HIS N H sing N N 177 HIS N H2 sing N N 178 HIS CA C sing N N 179 HIS CA CB sing N N 180 HIS CA HA sing N N 181 HIS C O doub N N 182 HIS C OXT sing N N 183 HIS CB CG sing N N 184 HIS CB HB2 sing N N 185 HIS CB HB3 sing N N 186 HIS CG ND1 sing Y N 187 HIS CG CD2 doub Y N 188 HIS ND1 CE1 doub Y N 189 HIS ND1 HD1 sing N N 190 HIS CD2 NE2 sing Y N 191 HIS CD2 HD2 sing N N 192 HIS CE1 NE2 sing Y N 193 HIS CE1 HE1 sing N N 194 HIS NE2 HE2 sing N N 195 HIS OXT HXT sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MAN C1 C2 sing N N 263 MAN C1 O1 sing N N 264 MAN C1 O5 sing N N 265 MAN C1 H1 sing N N 266 MAN C2 C3 sing N N 267 MAN C2 O2 sing N N 268 MAN C2 H2 sing N N 269 MAN C3 C4 sing N N 270 MAN C3 O3 sing N N 271 MAN C3 H3 sing N N 272 MAN C4 C5 sing N N 273 MAN C4 O4 sing N N 274 MAN C4 H4 sing N N 275 MAN C5 C6 sing N N 276 MAN C5 O5 sing N N 277 MAN C5 H5 sing N N 278 MAN C6 O6 sing N N 279 MAN C6 H61 sing N N 280 MAN C6 H62 sing N N 281 MAN O1 HO1 sing N N 282 MAN O2 HO2 sing N N 283 MAN O3 HO3 sing N N 284 MAN O4 HO4 sing N N 285 MAN O6 HO6 sing N N 286 MET N CA sing N N 287 MET N H sing N N 288 MET N H2 sing N N 289 MET CA C sing N N 290 MET CA CB sing N N 291 MET CA HA sing N N 292 MET C O doub N N 293 MET C OXT sing N N 294 MET CB CG sing N N 295 MET CB HB2 sing N N 296 MET CB HB3 sing N N 297 MET CG SD sing N N 298 MET CG HG2 sing N N 299 MET CG HG3 sing N N 300 MET SD CE sing N N 301 MET CE HE1 sing N N 302 MET CE HE2 sing N N 303 MET CE HE3 sing N N 304 MET OXT HXT sing N N 305 NAG C1 C2 sing N N 306 NAG C1 O1 sing N N 307 NAG C1 O5 sing N N 308 NAG C1 H1 sing N N 309 NAG C2 C3 sing N N 310 NAG C2 N2 sing N N 311 NAG C2 H2 sing N N 312 NAG C3 C4 sing N N 313 NAG C3 O3 sing N N 314 NAG C3 H3 sing N N 315 NAG C4 C5 sing N N 316 NAG C4 O4 sing N N 317 NAG C4 H4 sing N N 318 NAG C5 C6 sing N N 319 NAG C5 O5 sing N N 320 NAG C5 H5 sing N N 321 NAG C6 O6 sing N N 322 NAG C6 H61 sing N N 323 NAG C6 H62 sing N N 324 NAG C7 C8 sing N N 325 NAG C7 N2 sing N N 326 NAG C7 O7 doub N N 327 NAG C8 H81 sing N N 328 NAG C8 H82 sing N N 329 NAG C8 H83 sing N N 330 NAG N2 HN2 sing N N 331 NAG O1 HO1 sing N N 332 NAG O3 HO3 sing N N 333 NAG O4 HO4 sing N N 334 NAG O6 HO6 sing N N 335 NGA C1 C2 sing N N 336 NGA C1 O1 sing N N 337 NGA C1 O5 sing N N 338 NGA C1 H1 sing N N 339 NGA C2 C3 sing N N 340 NGA C2 N2 sing N N 341 NGA C2 H2 sing N N 342 NGA C3 C4 sing N N 343 NGA C3 O3 sing N N 344 NGA C3 H3 sing N N 345 NGA C4 C5 sing N N 346 NGA C4 O4 sing N N 347 NGA C4 H4 sing N N 348 NGA C5 C6 sing N N 349 NGA C5 O5 sing N N 350 NGA C5 H5 sing N N 351 NGA C6 O6 sing N N 352 NGA C6 H61 sing N N 353 NGA C6 H62 sing N N 354 NGA C7 C8 sing N N 355 NGA C7 N2 sing N N 356 NGA C7 O7 doub N N 357 NGA C8 H81 sing N N 358 NGA C8 H82 sing N N 359 NGA C8 H83 sing N N 360 NGA N2 HN2 sing N N 361 NGA O1 HO1 sing N N 362 NGA O3 HO3 sing N N 363 NGA O4 HO4 sing N N 364 NGA O6 HO6 sing N N 365 PHE N CA sing N N 366 PHE N H sing N N 367 PHE N H2 sing N N 368 PHE CA C sing N N 369 PHE CA CB sing N N 370 PHE CA HA sing N N 371 PHE C O doub N N 372 PHE C OXT sing N N 373 PHE CB CG sing N N 374 PHE CB HB2 sing N N 375 PHE CB HB3 sing N N 376 PHE CG CD1 doub Y N 377 PHE CG CD2 sing Y N 378 PHE CD1 CE1 sing Y N 379 PHE CD1 HD1 sing N N 380 PHE CD2 CE2 doub Y N 381 PHE CD2 HD2 sing N N 382 PHE CE1 CZ doub Y N 383 PHE CE1 HE1 sing N N 384 PHE CE2 CZ sing Y N 385 PHE CE2 HE2 sing N N 386 PHE CZ HZ sing N N 387 PHE OXT HXT sing N N 388 PRO N CA sing N N 389 PRO N CD sing N N 390 PRO N H sing N N 391 PRO CA C sing N N 392 PRO CA CB sing N N 393 PRO CA HA sing N N 394 PRO C O doub N N 395 PRO C OXT sing N N 396 PRO CB CG sing N N 397 PRO CB HB2 sing N N 398 PRO CB HB3 sing N N 399 PRO CG CD sing N N 400 PRO CG HG2 sing N N 401 PRO CG HG3 sing N N 402 PRO CD HD2 sing N N 403 PRO CD HD3 sing N N 404 PRO OXT HXT sing N N 405 SER N CA sing N N 406 SER N H sing N N 407 SER N H2 sing N N 408 SER CA C sing N N 409 SER CA CB sing N N 410 SER CA HA sing N N 411 SER C O doub N N 412 SER C OXT sing N N 413 SER CB OG sing N N 414 SER CB HB2 sing N N 415 SER CB HB3 sing N N 416 SER OG HG sing N N 417 SER OXT HXT sing N N 418 SIA C1 C2 sing N N 419 SIA C1 O1A doub N N 420 SIA C1 O1B sing N N 421 SIA C2 C3 sing N N 422 SIA C2 O2 sing N N 423 SIA C2 O6 sing N N 424 SIA C3 C4 sing N N 425 SIA C3 H32 sing N N 426 SIA C3 H31 sing N N 427 SIA C4 C5 sing N N 428 SIA C4 O4 sing N N 429 SIA C4 H4 sing N N 430 SIA C5 C6 sing N N 431 SIA C5 N5 sing N N 432 SIA C5 H5 sing N N 433 SIA C6 C7 sing N N 434 SIA C6 O6 sing N N 435 SIA C6 H6 sing N N 436 SIA C7 C8 sing N N 437 SIA C7 O7 sing N N 438 SIA C7 H7 sing N N 439 SIA C8 C9 sing N N 440 SIA C8 O8 sing N N 441 SIA C8 H8 sing N N 442 SIA C9 O9 sing N N 443 SIA C9 H92 sing N N 444 SIA C9 H91 sing N N 445 SIA C10 C11 sing N N 446 SIA C10 N5 sing N N 447 SIA C10 O10 doub N N 448 SIA C11 H111 sing N N 449 SIA C11 H113 sing N N 450 SIA C11 H112 sing N N 451 SIA N5 HN5 sing N N 452 SIA O1B HO1B sing N N 453 SIA O2 HO2 sing N N 454 SIA O4 HO4 sing N N 455 SIA O7 HO7 sing N N 456 SIA O8 HO8 sing N N 457 SIA O9 HO9 sing N N 458 THR N CA sing N N 459 THR N H sing N N 460 THR N H2 sing N N 461 THR CA C sing N N 462 THR CA CB sing N N 463 THR CA HA sing N N 464 THR C O doub N N 465 THR C OXT sing N N 466 THR CB OG1 sing N N 467 THR CB CG2 sing N N 468 THR CB HB sing N N 469 THR OG1 HG1 sing N N 470 THR CG2 HG21 sing N N 471 THR CG2 HG22 sing N N 472 THR CG2 HG23 sing N N 473 THR OXT HXT sing N N 474 TRP N CA sing N N 475 TRP N H sing N N 476 TRP N H2 sing N N 477 TRP CA C sing N N 478 TRP CA CB sing N N 479 TRP CA HA sing N N 480 TRP C O doub N N 481 TRP C OXT sing N N 482 TRP CB CG sing N N 483 TRP CB HB2 sing N N 484 TRP CB HB3 sing N N 485 TRP CG CD1 doub Y N 486 TRP CG CD2 sing Y N 487 TRP CD1 NE1 sing Y N 488 TRP CD1 HD1 sing N N 489 TRP CD2 CE2 doub Y N 490 TRP CD2 CE3 sing Y N 491 TRP NE1 CE2 sing Y N 492 TRP NE1 HE1 sing N N 493 TRP CE2 CZ2 sing Y N 494 TRP CE3 CZ3 doub Y N 495 TRP CE3 HE3 sing N N 496 TRP CZ2 CH2 doub Y N 497 TRP CZ2 HZ2 sing N N 498 TRP CZ3 CH2 sing Y N 499 TRP CZ3 HZ3 sing N N 500 TRP CH2 HH2 sing N N 501 TRP OXT HXT sing N N 502 TYR N CA sing N N 503 TYR N H sing N N 504 TYR N H2 sing N N 505 TYR CA C sing N N 506 TYR CA CB sing N N 507 TYR CA HA sing N N 508 TYR C O doub N N 509 TYR C OXT sing N N 510 TYR CB CG sing N N 511 TYR CB HB2 sing N N 512 TYR CB HB3 sing N N 513 TYR CG CD1 doub Y N 514 TYR CG CD2 sing Y N 515 TYR CD1 CE1 sing Y N 516 TYR CD1 HD1 sing N N 517 TYR CD2 CE2 doub Y N 518 TYR CD2 HD2 sing N N 519 TYR CE1 CZ doub Y N 520 TYR CE1 HE1 sing N N 521 TYR CE2 CZ sing Y N 522 TYR CE2 HE2 sing N N 523 TYR CZ OH sing N N 524 TYR OH HH sing N N 525 TYR OXT HXT sing N N 526 VAL N CA sing N N 527 VAL N H sing N N 528 VAL N H2 sing N N 529 VAL CA C sing N N 530 VAL CA CB sing N N 531 VAL CA HA sing N N 532 VAL C O doub N N 533 VAL C OXT sing N N 534 VAL CB CG1 sing N N 535 VAL CB CG2 sing N N 536 VAL CB HB sing N N 537 VAL CG1 HG11 sing N N 538 VAL CG1 HG12 sing N N 539 VAL CG1 HG13 sing N N 540 VAL CG2 HG21 sing N N 541 VAL CG2 HG22 sing N N 542 VAL CG2 HG23 sing N N 543 VAL OXT HXT sing N N 544 # _pdbx_audit_support.funding_organization 'Netherlands Organisation for Scientific Research' _pdbx_audit_support.country Netherlands _pdbx_audit_support.grant_number 723.012.002 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 FUC 2 n 3 NGA 1 n 3 GAL 2 n 3 SIA 3 n # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 1URL '1URL, 4FRW, 1CS6, 3P3Y, 2YD6' 2 ? 'experimental model' PDB 4FRW '1URL, 4FRW, 1CS6, 3P3Y, 2YD6' 3 ? 'experimental model' PDB 1CS6 '1URL, 4FRW, 1CS6, 3P3Y, 2YD6' 4 ? 'experimental model' PDB 3P3Y '1URL, 4FRW, 1CS6, 3P3Y, 2YD6' 5 ? 'experimental model' PDB 2YD6 '1URL, 4FRW, 1CS6, 3P3Y, 2YD6' # _atom_sites.entry_id 5LF5 _atom_sites.fract_transf_matrix[1][1] 0.003586 _atom_sites.fract_transf_matrix[1][2] 0.002070 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.004141 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015995 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_