HEADER CELL CYCLE 07-JUL-16 5LGG TITLE THE N-TERMINAL WD40 DOMAIN OF APC1 (ANAPHASE PROMOTING COMPLEX SUBUNIT TITLE 2 1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANAPHASE-PROMOTING COMPLEX SUBUNIT 1,ANAPHASE-PROMOTING COMPND 3 COMPLEX SUBUNIT 1,ANAPHASE-PROMOTING COMPLEX SUBUNIT 1,ANAPHASE- COMPND 4 PROMOTING COMPLEX SUBUNIT 1; COMPND 5 CHAIN: A; COMPND 6 SYNONYM: APC1,CYCLOSOME SUBUNIT 1,MITOTIC CHECKPOINT REGULATOR, COMPND 7 TESTIS-SPECIFIC GENE 24 PROTEIN,APC1,CYCLOSOME SUBUNIT 1,MITOTIC COMPND 8 CHECKPOINT REGULATOR,TESTIS-SPECIFIC GENE 24 PROTEIN,APC1,CYCLOSOME COMPND 9 SUBUNIT 1,MITOTIC CHECKPOINT REGULATOR,TESTIS-SPECIFIC GENE 24 COMPND 10 PROTEIN,APC1,CYCLOSOME SUBUNIT 1,MITOTIC CHECKPOINT REGULATOR,TESTIS- COMPND 11 SPECIFIC GENE 24 PROTEIN; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ANAPC1, TSG24; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS APC/C, CELL CYCLE, WD40 EXPDTA X-RAY DIFFRACTION AUTHOR Q.LI,S.AIBARA,D.BARFORD REVDAT 4 10-JAN-24 5LGG 1 REMARK REVDAT 3 30-AUG-17 5LGG 1 REMARK REVDAT 2 26-OCT-16 5LGG 1 COMPND SOURCE DBREF REVDAT 1 05-OCT-16 5LGG 0 JRNL AUTH Q.LI,L.CHANG,S.AIBARA,J.YANG,Z.ZHANG,D.BARFORD JRNL TITL WD40 DOMAIN OF APC1 IS CRITICAL FOR THE COACTIVATOR-INDUCED JRNL TITL 2 ALLOSTERIC TRANSITION THAT STIMULATES APC/C CATALYTIC JRNL TITL 3 ACTIVITY. JRNL REF PROC.NATL.ACAD.SCI.USA V. 113 10547 2016 JRNL REFN ESSN 1091-6490 JRNL PMID 27601667 JRNL DOI 10.1073/PNAS.1607147113 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1810 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 25388 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 1246 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1376 - 4.4704 0.99 2859 161 0.1568 0.1915 REMARK 3 2 4.4704 - 3.5490 1.00 2770 133 0.1469 0.1844 REMARK 3 3 3.5490 - 3.1005 1.00 2741 150 0.1703 0.2469 REMARK 3 4 3.1005 - 2.8171 1.00 2734 135 0.1978 0.2181 REMARK 3 5 2.8171 - 2.6153 1.00 2715 139 0.2063 0.2770 REMARK 3 6 2.6153 - 2.4611 1.00 2719 150 0.2130 0.2723 REMARK 3 7 2.4611 - 2.3379 1.00 2690 138 0.2365 0.2952 REMARK 3 8 2.3379 - 2.2361 0.96 2610 121 0.2569 0.3582 REMARK 3 9 2.2361 - 2.1500 0.85 2304 119 0.2693 0.3009 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3049 REMARK 3 ANGLE : 1.198 4129 REMARK 3 CHIRALITY : 0.048 475 REMARK 3 PLANARITY : 0.005 522 REMARK 3 DIHEDRAL : 15.040 1124 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.9525 -27.0090 16.5000 REMARK 3 T TENSOR REMARK 3 T11: 0.3740 T22: 0.3763 REMARK 3 T33: 0.2897 T12: -0.0781 REMARK 3 T13: -0.0051 T23: 0.0573 REMARK 3 L TENSOR REMARK 3 L11: 3.1803 L22: 2.3207 REMARK 3 L33: 5.1637 L12: 0.1737 REMARK 3 L13: -0.1675 L23: -0.9675 REMARK 3 S TENSOR REMARK 3 S11: 0.4478 S12: -0.5784 S13: 0.1075 REMARK 3 S21: 0.7419 S22: -0.4225 S23: 0.1120 REMARK 3 S31: 0.1536 S32: -0.1168 S33: -0.0867 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.7445 -37.1466 -8.2891 REMARK 3 T TENSOR REMARK 3 T11: 0.4664 T22: 0.4600 REMARK 3 T33: 0.4677 T12: 0.1439 REMARK 3 T13: -0.0554 T23: -0.0053 REMARK 3 L TENSOR REMARK 3 L11: 5.5498 L22: 3.3976 REMARK 3 L33: 3.3116 L12: -0.0262 REMARK 3 L13: 0.5741 L23: -0.3307 REMARK 3 S TENSOR REMARK 3 S11: 0.2478 S12: -0.6774 S13: -0.8695 REMARK 3 S21: -0.0379 S22: -0.1132 S23: 0.3070 REMARK 3 S31: 0.4641 S32: 0.1980 S33: 0.0119 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 90 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.0060 -31.0187 -15.4675 REMARK 3 T TENSOR REMARK 3 T11: 0.3202 T22: 0.3066 REMARK 3 T33: 0.2853 T12: -0.0070 REMARK 3 T13: -0.0191 T23: -0.0270 REMARK 3 L TENSOR REMARK 3 L11: 3.6754 L22: 2.4946 REMARK 3 L33: 4.4371 L12: -0.7932 REMARK 3 L13: -0.2794 L23: 0.3886 REMARK 3 S TENSOR REMARK 3 S11: 0.2013 S12: 0.1516 S13: -0.1019 REMARK 3 S21: 0.1007 S22: -0.0847 S23: 0.1688 REMARK 3 S31: 0.3867 S32: 0.3208 S33: -0.1163 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 155 THROUGH 260 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.8931 -15.3523 -24.5126 REMARK 3 T TENSOR REMARK 3 T11: 0.4363 T22: 0.4287 REMARK 3 T33: 0.3462 T12: -0.1008 REMARK 3 T13: -0.0075 T23: 0.1046 REMARK 3 L TENSOR REMARK 3 L11: 2.6043 L22: 1.3847 REMARK 3 L33: 4.0108 L12: 0.1673 REMARK 3 L13: 1.3889 L23: 1.2009 REMARK 3 S TENSOR REMARK 3 S11: -0.1660 S12: 0.5891 S13: 0.3336 REMARK 3 S21: -0.3717 S22: 0.0183 S23: -0.1955 REMARK 3 S31: -0.7029 S32: 0.6473 S33: 0.0742 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 261 THROUGH 439 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.2480 -7.4507 -13.8021 REMARK 3 T TENSOR REMARK 3 T11: 0.6397 T22: 0.2526 REMARK 3 T33: 0.4463 T12: -0.1262 REMARK 3 T13: -0.0971 T23: 0.0855 REMARK 3 L TENSOR REMARK 3 L11: 1.7915 L22: 1.0245 REMARK 3 L33: 2.2726 L12: -0.3389 REMARK 3 L13: 0.5849 L23: -0.2919 REMARK 3 S TENSOR REMARK 3 S11: -0.4050 S12: 0.2692 S13: 0.4072 REMARK 3 S21: -0.1835 S22: 0.0563 S23: -0.0237 REMARK 3 S31: -1.2308 S32: 0.3950 S33: 0.1251 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 440 THROUGH 511 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.2753 -14.1566 1.8658 REMARK 3 T TENSOR REMARK 3 T11: 0.2986 T22: 0.2513 REMARK 3 T33: 0.3315 T12: -0.0357 REMARK 3 T13: -0.0224 T23: 0.0215 REMARK 3 L TENSOR REMARK 3 L11: 1.5776 L22: 3.7453 REMARK 3 L33: 5.0690 L12: -1.6106 REMARK 3 L13: 1.2861 L23: -0.7247 REMARK 3 S TENSOR REMARK 3 S11: -0.2129 S12: 0.0385 S13: 0.0907 REMARK 3 S21: 0.0937 S22: 0.0437 S23: 0.0097 REMARK 3 S31: -0.7411 S32: 0.1629 S33: 0.1569 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 512 THROUGH 613 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.6163 -30.6272 3.9368 REMARK 3 T TENSOR REMARK 3 T11: 0.2654 T22: 0.3078 REMARK 3 T33: 0.2955 T12: 0.0593 REMARK 3 T13: -0.0199 T23: -0.0662 REMARK 3 L TENSOR REMARK 3 L11: 2.3199 L22: 1.3664 REMARK 3 L33: 3.0218 L12: -0.2560 REMARK 3 L13: 2.5769 L23: -0.7801 REMARK 3 S TENSOR REMARK 3 S11: 0.4722 S12: 0.3091 S13: -0.2682 REMARK 3 S21: -0.1834 S22: -0.1723 S23: -0.0548 REMARK 3 S31: 0.5062 S32: 0.3566 S33: -0.2610 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5LGG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1200000681. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25408 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 40.131 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.05931 REMARK 200 R SYM (I) : 0.06606 REMARK 200 FOR THE DATA SET : 16.7600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.43300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.010 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4UI9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CITRIC ACID, PH5.0, 2M NACL, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.21800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.21800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 41.31650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 56.63100 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 41.31650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 56.63100 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 50.21800 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 41.31650 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 56.63100 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 50.21800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 41.31650 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 56.63100 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 61 REMARK 465 PRO A 62 REMARK 465 ASN A 63 REMARK 465 GLY A 64 REMARK 465 SER A 65 REMARK 465 ALA A 66 REMARK 465 GLY A 67 REMARK 465 SER A 68 REMARK 465 ALA A 69 REMARK 465 SER A 195 REMARK 465 HIS A 196 REMARK 465 GLU A 197 REMARK 465 VAL A 198 REMARK 465 PRO A 199 REMARK 465 PRO A 200 REMARK 465 GLY A 201 REMARK 465 SER A 202 REMARK 465 GLY A 232 REMARK 465 SER A 233 REMARK 465 SER A 234 REMARK 465 VAL A 375 REMARK 465 VAL A 376 REMARK 465 LEU A 377 REMARK 465 LYS A 378 REMARK 465 PHE A 379 REMARK 465 SER A 380 REMARK 465 GLU A 381 REMARK 465 GLN A 382 REMARK 465 GLY A 383 REMARK 465 GLY A 384 REMARK 465 THR A 385 REMARK 465 PRO A 386 REMARK 465 GLN A 387 REMARK 465 ASN A 388 REMARK 465 VAL A 389 REMARK 465 ALA A 390 REMARK 465 THR A 391 REMARK 465 SER A 392 REMARK 465 SER A 393 REMARK 465 SER A 394 REMARK 465 LEU A 395 REMARK 465 THR A 396 REMARK 465 ALA A 397 REMARK 465 HIS A 398 REMARK 465 LEU A 399 REMARK 465 ARG A 400 REMARK 465 GLY A 401 REMARK 465 SER A 402 REMARK 465 THR A 418 REMARK 465 ASN A 419 REMARK 465 ILE A 420 REMARK 465 ARG A 421 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 19 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 714 O HOH A 825 2.02 REMARK 500 O HOH A 776 O HOH A 863 2.05 REMARK 500 O HOH A 746 O HOH A 841 2.06 REMARK 500 O HOH A 710 O HOH A 792 2.10 REMARK 500 OD1 ASP A 462 OG1 THR A 464 2.12 REMARK 500 NE ARG A 15 O HOH A 701 2.13 REMARK 500 OE1 GLU A 19 O HOH A 702 2.16 REMARK 500 OG1 THR A 596 O HOH A 703 2.17 REMARK 500 NH1 ARG A 191 O PRO A 208 2.18 REMARK 500 OG1 THR A 596 O HOH A 704 2.18 REMARK 500 O HOH A 723 O HOH A 800 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER A 172 O HOH A 701 6444 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 8 -49.15 -133.51 REMARK 500 GLN A 125 143.57 -170.23 REMARK 500 LYS A 463 14.08 59.85 REMARK 500 ALA A 516 156.95 -49.23 REMARK 500 HIS A 592 -118.58 53.72 REMARK 500 REMARK 500 REMARK: NULL DBREF 5LGG A 1 63 UNP Q9H1A4 APC1_HUMAN 1 33 DBREF 5LGG A 70 400 UNP Q9H1A4 APC1_HUMAN 70 306 DBREF 5LGG A 403 522 UNP Q9H1A4 APC1_HUMAN 403 522 DBREF 5LGG A 581 613 UNP Q9H1A4 APC1_HUMAN 581 613 SEQADV 5LGG GLY A 64 UNP Q9H1A4 LINKER SEQADV 5LGG SER A 65 UNP Q9H1A4 LINKER SEQADV 5LGG ALA A 66 UNP Q9H1A4 LINKER SEQADV 5LGG GLY A 67 UNP Q9H1A4 LINKER SEQADV 5LGG SER A 68 UNP Q9H1A4 LINKER SEQADV 5LGG ALA A 69 UNP Q9H1A4 LINKER SEQADV 5LGG GLY A 401 UNP Q9H1A4 LINKER SEQADV 5LGG SER A 402 UNP Q9H1A4 LINKER SEQRES 1 A 431 MET SER ASN PHE TYR GLU GLU ARG THR THR MET ILE ALA SEQRES 2 A 431 ALA ARG ASP LEU GLN GLU PHE VAL PRO PHE GLY ARG ASP SEQRES 3 A 431 HIS CYS LYS HIS HIS PRO ASN GLY SER ALA GLY SER ALA SEQRES 4 A 431 GLN LYS GLU SER TRP GLN LEU ARG LYS GLY VAL SER GLU SEQRES 5 A 431 ILE GLY GLU ASP VAL ASP TYR ASP GLU GLU LEU TYR VAL SEQRES 6 A 431 ALA GLY ASN MET VAL ILE TRP SER LYS GLY SER LYS SER SEQRES 7 A 431 GLN ALA LEU ALA VAL TYR LYS ALA PHE THR VAL ASP SER SEQRES 8 A 431 PRO VAL GLN GLN ALA LEU TRP CYS ASP PHE ILE ILE SER SEQRES 9 A 431 GLN ASP LYS SER GLU LYS ALA TYR SER SER ASN GLU VAL SEQRES 10 A 431 GLU LYS CYS ILE CYS ILE LEU GLN SER SER CYS ILE ASN SEQRES 11 A 431 MET HIS SER ILE GLU GLY LYS ASP TYR ILE ALA SER LEU SEQRES 12 A 431 PRO PHE GLN VAL ALA ASN VAL TRP PRO THR LYS TYR GLY SEQRES 13 A 431 LEU LEU PHE GLU ARG SER ALA SER SER HIS GLU VAL PRO SEQRES 14 A 431 PRO GLY SER PRO ARG GLU PRO LEU PRO THR MET PHE SER SEQRES 15 A 431 MET LEU HIS PRO LEU ASP GLU ILE THR PRO LEU VAL CYS SEQRES 16 A 431 LYS SER GLY SER LEU PHE GLY SER SER ARG VAL GLN TYR SEQRES 17 A 431 VAL VAL ASP HIS ALA MET LYS ILE VAL PHE LEU ASN THR SEQRES 18 A 431 ASP PRO SER ILE VAL MET THR TYR ASP ALA VAL GLN ASN SEQRES 19 A 431 VAL HIS SER VAL TRP THR LEU ARG ARG VAL LYS SER GLU SEQRES 20 A 431 GLU GLU ASN VAL VAL LEU LYS PHE SER GLU GLN GLY GLY SEQRES 21 A 431 THR PRO GLN ASN VAL ALA THR SER SER SER LEU THR ALA SEQRES 22 A 431 HIS LEU ARG GLY SER ILE VAL PRO GLU LEU CYS ILE ASP SEQRES 23 A 431 HIS LEU TRP THR GLU THR ILE THR ASN ILE ARG GLU LYS SEQRES 24 A 431 ASN SER GLN ALA SER LYS VAL PHE ILE THR SER ASP LEU SEQRES 25 A 431 CYS GLY GLN LYS PHE LEU CYS PHE LEU VAL GLU SER GLN SEQRES 26 A 431 LEU GLN LEU ARG CYS VAL LYS PHE GLN GLU SER ASN ASP SEQRES 27 A 431 LYS THR GLN LEU ILE PHE GLY SER VAL THR ASN ILE PRO SEQRES 28 A 431 ALA LYS ASP ALA ALA PRO VAL GLU LYS ILE ASP THR MET SEQRES 29 A 431 LEU VAL LEU GLU GLY SER GLY ASN LEU VAL LEU TYR THR SEQRES 30 A 431 GLY VAL VAL ARG VAL GLY LYS VAL PHE ILE PRO GLY LEU SEQRES 31 A 431 PRO ALA PRO SER LEU THR MET SER GLY THR TYR ILE HIS SEQRES 32 A 431 SER ILE ARG ASP PRO VAL HIS ASN ARG VAL THR LEU GLU SEQRES 33 A 431 LEU SER ASN GLY SER MET VAL ARG ILE THR ILE PRO GLU SEQRES 34 A 431 ILE ALA FORMUL 2 HOH *167(H2 O) HELIX 1 AA1 PRO A 22 CYS A 28 5 7 HELIX 2 AA2 GLU A 447 GLN A 449 5 3 HELIX 3 AA3 GLU A 483 ASP A 486 5 4 HELIX 4 AA4 ALA A 516 THR A 520 5 5 SHEET 1 AA1 5 MET A 11 ALA A 13 0 SHEET 2 AA1 5 VAL A 504 PHE A 510 1 O PHE A 510 N ILE A 12 SHEET 3 AA1 5 LEU A 497 THR A 501 -1 N LEU A 499 O GLY A 507 SHEET 4 AA1 5 THR A 487 LEU A 491 -1 N MET A 488 O TYR A 500 SHEET 5 AA1 5 ASP A 478 VAL A 482 -1 N ASP A 478 O LEU A 491 SHEET 1 AA2 4 ARG A 15 GLU A 19 0 SHEET 2 AA2 4 MET A 604 THR A 608 -1 O ARG A 606 N GLN A 18 SHEET 3 AA2 4 ARG A 594 LEU A 599 -1 N LEU A 597 O VAL A 605 SHEET 4 AA2 4 ILE A 584 VAL A 591 -1 N SER A 586 O GLU A 598 SHEET 1 AA3 4 GLU A 72 LYS A 78 0 SHEET 2 AA3 4 TYR A 89 ALA A 96 -1 O VAL A 95 N SER A 73 SHEET 3 AA3 4 MET A 99 SER A 106 -1 O GLY A 105 N ASP A 90 SHEET 4 AA3 4 VAL A 113 THR A 118 -1 O LYS A 115 N TRP A 102 SHEET 1 AA4 4 GLN A 125 SER A 134 0 SHEET 2 AA4 4 GLU A 146 LEU A 154 -1 O CYS A 152 N LEU A 127 SHEET 3 AA4 4 ILE A 159 SER A 163 -1 O ASN A 160 N ILE A 153 SHEET 4 AA4 4 ASP A 168 ALA A 171 -1 O TYR A 169 N MET A 161 SHEET 1 AA5 4 VAL A 177 THR A 183 0 SHEET 2 AA5 4 GLY A 186 ARG A 191 -1 O GLU A 190 N ALA A 178 SHEET 3 AA5 4 MET A 210 MET A 213 -1 O PHE A 211 N PHE A 189 SHEET 4 AA5 4 THR A 221 PRO A 222 -1 O THR A 221 N SER A 212 SHEET 1 AA6 6 GLN A 237 TYR A 238 0 SHEET 2 AA6 6 VAL A 224 LYS A 226 -1 N CYS A 225 O GLN A 237 SHEET 3 AA6 6 LEU A 407 THR A 414 1 O ILE A 409 N LYS A 226 SHEET 4 AA6 6 VAL A 265 ARG A 273 -1 N VAL A 268 O TRP A 413 SHEET 5 AA6 6 ILE A 255 ASP A 260 -1 N THR A 258 O SER A 267 SHEET 6 AA6 6 MET A 244 ASN A 250 -1 N VAL A 247 O MET A 257 SHEET 1 AA7 4 PHE A 431 SER A 434 0 SHEET 2 AA7 4 LYS A 440 VAL A 446 -1 O CYS A 443 N PHE A 431 SHEET 3 AA7 4 GLN A 451 GLU A 459 -1 O GLN A 451 N VAL A 446 SHEET 4 AA7 4 LEU A 466 PRO A 475 -1 O ILE A 474 N LEU A 452 CISPEP 1 ASP A 252 PRO A 253 0 2.04 CRYST1 82.633 113.262 100.436 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012102 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008829 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009957 0.00000