HEADER TRANSFERASE 14-JUL-16 5LI9 TITLE STRUCTURE OF A NUCLEOTIDE-BOUND FORM OF PKCIOTA CORE KINASE DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN KINASE C IOTA TYPE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ATYPICAL PROTEIN KINASE C-LAMBDA/IOTA,APKC-LAMBDA/IOTA,NPKC- COMPND 5 IOTA; COMPND 6 EC: 2.7.11.13; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PRKCI, DXS1179E; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HIGH FIVE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: UNIDENTIFIED BACULOVIRUS KEYWDS APKC, POLARITY, COMPLEX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.E.IVANOVA,A.G.PURKISS,N.Q.MCDONALD REVDAT 3 10-JAN-24 5LI9 1 COMPND REVDAT 2 17-OCT-18 5LI9 1 COMPND SOURCE REVDAT 1 14-SEP-16 5LI9 0 JRNL AUTH E.V.SORIANO,M.E.IVANOVA,G.FLETCHER,P.RIOU,P.P.KNOWLES, JRNL AUTH 2 K.BARNOUIN,A.PURKISS,B.KOSTELECKY,P.SAIU,M.LINCH,A.ELBEDIWY, JRNL AUTH 3 S.KJR,N.O'REILLY,A.P.SNIJDERS,P.J.PARKER,B.J.THOMPSON, JRNL AUTH 4 N.Q.MCDONALD JRNL TITL APKC INHIBITION BY PAR3 CR3 FLANKING REGIONS CONTROLS JRNL TITL 2 SUBSTRATE ACCESS AND UNDERPINS APICAL-JUNCTIONAL JRNL TITL 3 POLARIZATION. JRNL REF DEV.CELL V. 38 384 2016 JRNL REFN ISSN 1534-5807 JRNL PMID 27554858 JRNL DOI 10.1016/J.DEVCEL.2016.07.018 REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 33825 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1717 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 52.2554 - 4.0975 1.00 2854 155 0.1537 0.1722 REMARK 3 2 4.0975 - 3.2525 1.00 2713 168 0.1384 0.1973 REMARK 3 3 3.2525 - 2.8414 1.00 2710 134 0.1709 0.2196 REMARK 3 4 2.8414 - 2.5816 1.00 2678 158 0.1877 0.2675 REMARK 3 5 2.5816 - 2.3966 1.00 2660 167 0.1981 0.2511 REMARK 3 6 2.3966 - 2.2553 1.00 2665 135 0.1880 0.2217 REMARK 3 7 2.2553 - 2.1423 1.00 2680 112 0.1975 0.2624 REMARK 3 8 2.1423 - 2.0490 1.00 2654 130 0.2254 0.2600 REMARK 3 9 2.0490 - 1.9702 1.00 2633 156 0.2324 0.2510 REMARK 3 10 1.9702 - 1.9022 0.99 2623 145 0.2822 0.3262 REMARK 3 11 1.9022 - 1.8427 0.98 2618 129 0.3185 0.3715 REMARK 3 12 1.8427 - 1.7900 0.99 2620 128 0.3576 0.3944 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2856 REMARK 3 ANGLE : 0.765 3865 REMARK 3 CHIRALITY : 0.048 409 REMARK 3 PLANARITY : 0.004 497 REMARK 3 DIHEDRAL : 12.356 1698 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 238 THROUGH 330) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6779 3.2698 -7.0829 REMARK 3 T TENSOR REMARK 3 T11: 0.0779 T22: 0.1242 REMARK 3 T33: 0.1225 T12: -0.0058 REMARK 3 T13: 0.0014 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 0.9757 L22: 1.3006 REMARK 3 L33: 2.0050 L12: -0.2597 REMARK 3 L13: 0.4836 L23: -0.6044 REMARK 3 S TENSOR REMARK 3 S11: -0.0220 S12: 0.0337 S13: 0.0500 REMARK 3 S21: 0.0030 S22: -0.0798 S23: -0.1155 REMARK 3 S31: 0.0430 S32: 0.1340 S33: 0.0770 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 343 THROUGH 467 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.7438 -0.8005 -17.1966 REMARK 3 T TENSOR REMARK 3 T11: 0.1083 T22: 0.1109 REMARK 3 T33: 0.0902 T12: 0.0006 REMARK 3 T13: -0.0034 T23: -0.0079 REMARK 3 L TENSOR REMARK 3 L11: 2.0187 L22: 2.3142 REMARK 3 L33: 1.8314 L12: -0.1203 REMARK 3 L13: 0.4816 L23: -0.3518 REMARK 3 S TENSOR REMARK 3 S11: 0.0270 S12: -0.1445 S13: -0.0689 REMARK 3 S21: 0.1329 S22: -0.0329 S23: 0.1019 REMARK 3 S31: 0.0041 S32: -0.0560 S33: 0.0180 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 468 THROUGH 513 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.1880 0.4509 -27.7582 REMARK 3 T TENSOR REMARK 3 T11: 0.1249 T22: 0.1517 REMARK 3 T33: 0.1550 T12: 0.0273 REMARK 3 T13: -0.0427 T23: -0.0411 REMARK 3 L TENSOR REMARK 3 L11: 1.9982 L22: 2.4185 REMARK 3 L33: 2.1449 L12: -0.0483 REMARK 3 L13: 0.0467 L23: -0.5410 REMARK 3 S TENSOR REMARK 3 S11: -0.0452 S12: 0.0873 S13: -0.0696 REMARK 3 S21: -0.0185 S22: 0.0418 S23: 0.1433 REMARK 3 S31: -0.0040 S32: -0.1540 S33: 0.0074 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5LI9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1200000778. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-SEP-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9686 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33998 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.790 REMARK 200 RESOLUTION RANGE LOW (A) : 52.233 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.16300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.60 REMARK 200 R MERGE FOR SHELL (I) : 1.79800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3A8W REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% MORPHEUS PRECIPITANT MIX 4, 10% REMARK 280 MORPHEUS CARBOXYLIC ACIDS, MORPHEUS BUFFER SYSTEM 1, PH 6.3, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.90300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.70550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.57150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.70550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.90300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.57150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 454 REMARK 465 ILE A 455 REMARK 465 VAL A 456 REMARK 465 GLY A 457 REMARK 465 SER A 458 REMARK 465 SER A 459 REMARK 465 ASP A 460 REMARK 465 ASN A 461 REMARK 465 PRO A 462 REMARK 465 ASP A 463 REMARK 465 GLN A 464 REMARK 465 ASN A 465 REMARK 465 MET A 590 REMARK 465 SER A 591 REMARK 465 ALA A 592 REMARK 465 GLU A 593 REMARK 465 GLU A 594 REMARK 465 CYS A 595 REMARK 465 VAL A 596 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 247 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 294 CG CD OE1 OE2 REMARK 470 GLN A 300 CG CD OE1 NE2 REMARK 470 ASN A 311 CG OD1 ND2 REMARK 470 ARG A 346 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 353 CG CD OE1 OE2 REMARK 470 GLU A 389 CD OE1 OE2 REMARK 470 ARG A 405 CD NE CZ NH1 NH2 REMARK 470 ASP A 468 CG OD1 OD2 REMARK 470 GLN A 472 CG CD OE1 NE2 REMARK 470 LYS A 477 CE NZ REMARK 470 GLN A 478 CD OE1 NE2 REMARK 470 ARG A 480 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 502 CG CD CE NZ REMARK 470 ASN A 524 CG OD1 ND2 REMARK 470 LEU A 588 CG CD1 CD2 REMARK 470 LEU A 589 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 754 O HOH A 861 3554 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 311 -43.38 92.90 REMARK 500 ARG A 348 -48.60 74.18 REMARK 500 ARG A 377 -1.11 70.11 REMARK 500 ASP A 396 78.11 72.31 REMARK 500 GLN A 510 -37.10 79.90 REMARK 500 ASN A 524 32.09 -84.83 REMARK 500 PRO A 587 11.62 -66.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PEG A 612 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACP A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMD A 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MRD A 610 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 611 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 612 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 613 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 614 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 615 DBREF 5LI9 A 248 596 UNP P41743 KPCI_HUMAN 248 596 SEQADV 5LI9 PHE A 247 UNP P41743 EXPRESSION TAG SEQRES 1 A 350 PHE SER LEU GLY LEU GLN ASP PHE ASP LEU LEU ARG VAL SEQRES 2 A 350 ILE GLY ARG GLY SER TYR ALA LYS VAL LEU LEU VAL ARG SEQRES 3 A 350 LEU LYS LYS THR ASP ARG ILE TYR ALA MET LYS VAL VAL SEQRES 4 A 350 LYS LYS GLU LEU VAL ASN ASP ASP GLU ASP ILE ASP TRP SEQRES 5 A 350 VAL GLN THR GLU LYS HIS VAL PHE GLU GLN ALA SER ASN SEQRES 6 A 350 HIS PRO PHE LEU VAL GLY LEU HIS SER CYS PHE GLN THR SEQRES 7 A 350 GLU SER ARG LEU PHE PHE VAL ILE GLU TYR VAL ASN GLY SEQRES 8 A 350 GLY ASP LEU MET PHE HIS MET GLN ARG GLN ARG LYS LEU SEQRES 9 A 350 PRO GLU GLU HIS ALA ARG PHE TYR SER ALA GLU ILE SER SEQRES 10 A 350 LEU ALA LEU ASN TYR LEU HIS GLU ARG GLY ILE ILE TYR SEQRES 11 A 350 ARG ASP LEU LYS LEU ASP ASN VAL LEU LEU ASP SER GLU SEQRES 12 A 350 GLY HIS ILE LYS LEU THR ASP TYR GLY MET CYS LYS GLU SEQRES 13 A 350 GLY LEU ARG PRO GLY ASP THR THR SER TPO PHE CYS GLY SEQRES 14 A 350 THR PRO ASN TYR ILE ALA PRO GLU ILE LEU ARG GLY GLU SEQRES 15 A 350 ASP TYR GLY PHE SER VAL ASP TRP TRP ALA LEU GLY VAL SEQRES 16 A 350 LEU MET PHE GLU MET MET ALA GLY ARG SER PRO PHE ASP SEQRES 17 A 350 ILE VAL GLY SER SER ASP ASN PRO ASP GLN ASN THR GLU SEQRES 18 A 350 ASP TYR LEU PHE GLN VAL ILE LEU GLU LYS GLN ILE ARG SEQRES 19 A 350 ILE PRO ARG SER LEU SER VAL LYS ALA ALA SER VAL LEU SEQRES 20 A 350 LYS SER PHE LEU ASN LYS ASP PRO LYS GLU ARG LEU GLY SEQRES 21 A 350 CYS HIS PRO GLN THR GLY PHE ALA ASP ILE GLN GLY HIS SEQRES 22 A 350 PRO PHE PHE ARG ASN VAL ASP TRP ASP MET MET GLU GLN SEQRES 23 A 350 LYS GLN VAL VAL PRO PRO PHE LYS PRO ASN ILE SER GLY SEQRES 24 A 350 GLU PHE GLY LEU ASP ASN PHE ASP SER GLN PHE THR ASN SEQRES 25 A 350 GLU PRO VAL GLN LEU TPO PRO ASP ASP ASP ASP ILE VAL SEQRES 26 A 350 ARG LYS ILE ASP GLN SER GLU PHE GLU GLY PHE GLU TYR SEQRES 27 A 350 ILE ASN PRO LEU LEU MET SER ALA GLU GLU CYS VAL MODRES 5LI9 TPO A 412 THR MODIFIED RESIDUE MODRES 5LI9 TPO A 564 THR MODIFIED RESIDUE HET TPO A 412 11 HET TPO A 564 11 HET ACP A 601 48 HET FMT A 602 3 HET FMT A 603 3 HET FMT A 604 3 HET FMT A 605 3 HET FMT A 606 3 HET FMT A 607 3 HET FMT A 608 3 HET IMD A 609 5 HET MRD A 610 8 HET PEG A 611 7 HET PEG A 612 4 HET PEG A 613 7 HET ACT A 614 4 HET ACT A 615 4 HETNAM TPO PHOSPHOTHREONINE HETNAM ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER HETNAM FMT FORMIC ACID HETNAM IMD IMIDAZOLE HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM ACT ACETATE ION HETSYN TPO PHOSPHONOTHREONINE HETSYN ACP ADENOSINE-5'-[BETA, GAMMA-METHYLENE]TRIPHOSPHATE FORMUL 1 TPO 2(C4 H10 N O6 P) FORMUL 2 ACP C11 H18 N5 O12 P3 FORMUL 3 FMT 7(C H2 O2) FORMUL 10 IMD C3 H5 N2 1+ FORMUL 11 MRD C6 H14 O2 FORMUL 12 PEG 3(C4 H10 O3) FORMUL 15 ACT 2(C2 H3 O2 1-) FORMUL 17 HOH *244(H2 O) HELIX 1 AA1 GLY A 250 GLN A 252 5 3 HELIX 2 AA2 GLU A 288 VAL A 290 5 3 HELIX 3 AA3 ASP A 292 SER A 310 1 19 HELIX 4 AA4 ASP A 339 ARG A 348 1 10 HELIX 5 AA5 PRO A 351 ARG A 372 1 22 HELIX 6 AA6 LYS A 380 ASP A 382 5 3 HELIX 7 AA7 THR A 416 ILE A 420 5 5 HELIX 8 AA8 ALA A 421 ARG A 426 1 6 HELIX 9 AA9 PHE A 432 GLY A 449 1 18 HELIX 10 AB1 GLU A 467 LYS A 477 1 11 HELIX 11 AB2 SER A 486 LEU A 497 1 12 HELIX 12 AB3 THR A 511 GLY A 518 1 8 HELIX 13 AB4 HIS A 519 ARG A 523 5 5 HELIX 14 AB5 ASP A 526 GLN A 532 1 7 HELIX 15 AB6 ASP A 553 ASN A 558 1 6 HELIX 16 AB7 ASP A 567 ARG A 572 1 6 HELIX 17 AB8 LYS A 573 ILE A 574 5 2 HELIX 18 AB9 ASP A 575 GLU A 580 5 6 SHEET 1 AA1 6 PHE A 254 ARG A 262 0 SHEET 2 AA1 6 ALA A 266 LEU A 273 -1 O VAL A 268 N GLY A 261 SHEET 3 AA1 6 ILE A 279 LYS A 286 -1 O TYR A 280 N VAL A 271 SHEET 4 AA1 6 ARG A 327 ILE A 332 -1 O ILE A 332 N ALA A 281 SHEET 5 AA1 6 LEU A 318 GLN A 323 -1 N SER A 320 O VAL A 331 SHEET 6 AA1 6 TYR A 584 ILE A 585 -1 O TYR A 584 N CYS A 321 SHEET 1 AA2 2 VAL A 384 LEU A 386 0 SHEET 2 AA2 2 ILE A 392 LEU A 394 -1 O LYS A 393 N LEU A 385 LINK C SER A 411 N TPO A 412 1555 1555 1.33 LINK C TPO A 412 N PHE A 413 1555 1555 1.33 LINK C LEU A 563 N TPO A 564 1555 1555 1.32 LINK C TPO A 564 N PRO A 565 1555 1555 1.35 SITE 1 AC1 21 ILE A 260 GLY A 261 ARG A 262 GLY A 263 SITE 2 AC1 21 SER A 264 TYR A 265 ALA A 266 VAL A 268 SITE 3 AC1 21 ALA A 281 LYS A 283 ILE A 332 GLU A 333 SITE 4 AC1 21 VAL A 335 ASP A 396 PHE A 552 HOH A 718 SITE 5 AC1 21 HOH A 724 HOH A 729 HOH A 739 HOH A 795 SITE 6 AC1 21 HOH A 816 SITE 1 AC2 5 ASN A 291 SER A 486 VAL A 487 LYS A 488 SITE 2 AC2 5 HOH A 722 SITE 1 AC3 6 ARG A 377 ASP A 378 LEU A 379 GLY A 415 SITE 2 AC3 6 THR A 416 TYR A 419 SITE 1 AC4 5 GLU A 325 VAL A 571 ARG A 572 ILE A 574 SITE 2 AC4 5 GLN A 576 SITE 1 AC5 5 ARG A 426 ARG A 483 SER A 484 LEU A 485 SITE 2 AC5 5 LYS A 573 SITE 1 AC6 5 LYS A 303 HIS A 304 VAL A 536 HOH A 744 SITE 2 AC6 5 HOH A 909 SITE 1 AC7 4 SER A 495 ASN A 498 GLU A 503 LEU A 505 SITE 1 AC8 3 TPO A 412 HOH A 710 HOH A 923 SITE 1 AC9 3 LEU A 381 GLU A 445 GLY A 449 SITE 1 AD1 8 MET A 341 LYS A 380 LEU A 381 ASP A 382 SITE 2 AD1 8 ASN A 418 TYR A 419 GLU A 445 SER A 451 SITE 1 AD2 6 ARG A 272 ASP A 277 ILE A 279 PRO A 406 SITE 2 AD2 6 GLN A 510 PHE A 547 SITE 1 AD3 10 SER A 264 GLU A 288 LEU A 289 SER A 491 SITE 2 AD3 10 GLY A 518 HIS A 519 PRO A 520 HOH A 707 SITE 3 AD3 10 HOH A 725 HOH A 827 SITE 1 AD4 6 TYR A 280 GLY A 317 LEU A 318 ASN A 586 SITE 2 AD4 6 HOH A 713 HOH A 799 SITE 1 AD5 4 VAL A 299 GLN A 300 GLU A 578 PHE A 582 CRYST1 61.806 65.143 87.411 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016180 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015351 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011440 0.00000